DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ zhang-2015-127 pig-ST Swine testicular cell line (ST cells) st Swine testicular cell line (ST cells) 17 clone 1; 17Cl-1; 17 Cl 1 Sus scrofa normal testicular cell line, established from a male 80-90 days old gestation embryo. This line is useful for the propagation, assay and isolation of porcine parvovirus, transmissible gastroenteritis virus and swine enteroviruses. coip coimmunoprecipitation co-immunoprecipitation CoIp immunoprecipitation Co-IP co-immunoprecipitation CoIp immunoprecipitation Co-IP coip experimental particp experimental participant identification experimental particp Zhang X., Shi H., Chen J., Shi D., Dong H., Feng L. Virus - Publications including interactions involving viral proteins fl@hvri.ac.cn, fengli h@163.com Virus research 2015 Only protein-protein interactions imex curation imex curation Coronavirus - Interactions investigated in the context of Coronavirus zhang-2015-126 in vitro In vitro pull down pull down experimental particp experimental participant identification experimental particp Zhang X., Shi H., Chen J., Shi D., Dong H., Feng L. Virus - Publications including interactions involving viral proteins Only those proteins found in both pulldown & coip experiments were considered as bona fide interacting partners. fl@hvri.ac.cn, fengli h@163.com Virus research 2015 Only protein-protein interactions imex curation imex curation Coronavirus - Interactions investigated in the context of Coronavirus zhang-2015-128 pig-ST Swine testicular cell line (ST cells) st Swine testicular cell line (ST cells) 17 clone 1; 17Cl-1; 17 Cl 1 Sus scrofa normal testicular cell line, established from a male 80-90 days old gestation embryo. This line is useful for the propagation, assay and isolation of porcine parvovirus, transmissible gastroenteritis virus and swine enteroviruses. confocal microscopy confocal microscopy experimental particp experimental participant identification experimental particp Zhang X., Shi H., Chen J., Shi D., Dong H., Feng L. Virus - Publications including interactions involving viral proteins fl@hvri.ac.cn, fengli h@163.com Virus research 2015 Only protein-protein interactions imex curation imex curation Coronavirus - Interactions investigated in the context of Coronavirus ncap_cvpfs Nucleoprotein N Nucleocapsid protein 6 protein protein TGEV-1 Porcine transmissible gastroenteritis coronavirus (strain FS772/70) MANQGQRVSWGDESTKIRGRSNSRGRKSNNIPLSFFNPITLQQGSKFWNLCPRDFVPKGIGNRDQQIGYWNRQTRYRMVKGQRKELPERWFFYYLGTGPHADAKFKDKLDGVVWVAKDGAMNKPTTLGSRGANNESKALKFDGKVPGEFQLEVNQSRDNSRSRSQSRSRSRNRSQSRGRQQSNNKKDDSVEQAVLAALKKLGVDTEKQQQRSCSKSKERSNSKTRDTTPKNENKHTWKRTAGKGDVTRFYGARSSSANFGDSDLVANGSSAKHYPQLAECVPSVSSILFGSYWTSKEDGDQIEVTFTHKYHLPKDDPKTEQFLQQINAYARPSEVAKEQRKRKSRSKSAERSEQEVVPDALIENYTDVFDDTQVEMIDEVTN vime_pig Vimentin VIM protein protein pig Sus scrofa (Pig) Pig MSTRTVSSSSYRRMFGGPGTASRPSSSRSYVTTSTRTYSLGSALRPSTSRSLYTSSPGGVYATRSSAVRLRSSVPGVRLLQDAVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEETLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEEIQELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLESLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE f1s8l9_pig HNRNPU protein protein pig Sus scrofa (Pig) Pig MSSSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDDEEAGGRPAMEPGNGSLDLGGDSAERSGAGLEQEAAAGGDEEEEEEEEEEEGIAALDGDQMELGEENGAAGAADSGPMEEEEAASEDENGDDQGFQEGEDELGEEEEGAGDENGHGEQQPQPPAAPQQQPQQQRGAAKEAAGKSSGPTSLFAVTVAPPGARQGQQQAGGDGKTEQKGGDKKRGVKRPREDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGIAFKISKEVLAERPLFPHVLCHNCAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGKYNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEESKKALPPEKKQNTGSKKSNKNKSGKNQFNRGGGHRGRGGFNMRGGNFRGGAPGNRGGYNRRGNMPQRGGGGGGSGGIGYPYPRGPVFPSRGGYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQWQQGSVHVNVLCGRVKGPK f1ri39_pig ACTN4 protein protein pig Sus scrofa (Pig) Pig MVDYHAANQSYQYGPSSGSNGAGGGGSMGDYMAQEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPKMLDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYERLASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNGWQHLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLKQRDYETATLSDIKALIRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSHNVNTRCQKICDQWDALGSLTHSRREALEKTEKQLETIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQQSNEHLRRQFASQANIVGPWIQTKMEEIGRISIEMNGTLEDQLSHLKQYERSIVDYKPNLDLLEQQHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMQEFRASFNHFDKDHGGALGPEEFKACLISLGYDVENDRQKQTGSMDSDDFRALLISTGYSLGDAEFNRIMSVVDPNHSGLVTFQAFIDFMSRETTDTDTADQVIASFKVLAGDKNFITAEELRRELPPDQAEYCIARMAPYQGPDAVPGALDYKSFSTALYGESDL hnrnpu-actn4-1 3716259 N/A 3716262 predetermined predetermined participant predetermined unspecified role unspecified role bait bait physiological level physiological level endogenous level endogenous endogenous endogenous level infection infection pig-ST Swine testicular cell line (ST cells) st Swine testicular cell line (ST cells) 17 clone 1; 17Cl-1; 17 Cl 1 Sus scrofa normal testicular cell line, established from a male 80-90 days old gestation embryo. This line is useful for the propagation, assay and isolation of porcine parvovirus, transmissible gastroenteritis virus and swine enteroviruses. N/A 3716263 ms participant Identification by mass spectrometry ms participant unspecified role unspecified role prey prey physiological level physiological level endogenous level endogenous endogenous endogenous level pig-ST Swine testicular cell line (ST cells) st Swine testicular cell line (ST cells) 17 clone 1; 17Cl-1; 17 Cl 1 Sus scrofa normal testicular cell line, established from a male 80-90 days old gestation embryo. This line is useful for the propagation, assay and isolation of porcine parvovirus, transmissible gastroenteritis virus and swine enteroviruses. N/A 3716264 ms participant Identification by mass spectrometry ms participant unspecified role unspecified role prey prey physiological level physiological level endogenous level endogenous endogenous endogenous level pig-ST Swine testicular cell line (ST cells) st Swine testicular cell line (ST cells) 17 clone 1; 17Cl-1; 17 Cl 1 Sus scrofa normal testicular cell line, established from a male 80-90 days old gestation embryo. This line is useful for the propagation, assay and isolation of porcine parvovirus, transmissible gastroenteritis virus and swine enteroviruses. N/A 3716265 ms participant Identification by mass spectrometry ms participant unspecified role unspecified role prey prey physiological level physiological level endogenous level endogenous endogenous endogenous level pig-ST Swine testicular cell line (ST cells) st Swine testicular cell line (ST cells) 17 clone 1; 17Cl-1; 17 Cl 1 Sus scrofa normal testicular cell line, established from a male 80-90 days old gestation embryo. This line is useful for the propagation, assay and isolation of porcine parvovirus, transmissible gastroenteritis virus and swine enteroviruses. association association false false false Fig 1, Tab1 vim-n-1 3716259 N/A 3716262 western blot western blot Immuno blot Immuno blot unspecified role unspecified role prey prey physiological level physiological level endogenous level endogenous endogenous endogenous level pig-ST Swine testicular cell line (ST cells) st Swine testicular cell line (ST cells) 17 clone 1; 17Cl-1; 17 Cl 1 Sus scrofa normal testicular cell line, established from a male 80-90 days old gestation embryo. This line is useful for the propagation, assay and isolation of porcine parvovirus, transmissible gastroenteritis virus and swine enteroviruses. N/A 3716263 western blot western blot Immuno blot Immuno blot unspecified role unspecified role bait bait physiological level physiological level endogenous level endogenous endogenous endogenous level infection infection pig-ST Swine testicular cell line (ST cells) st Swine testicular cell line (ST cells) 17 clone 1; 17Cl-1; 17 Cl 1 Sus scrofa normal testicular cell line, established from a male 80-90 days old gestation embryo. This line is useful for the propagation, assay and isolation of porcine parvovirus, transmissible gastroenteritis virus and swine enteroviruses. physical association physical association false false false Fig 4 actn4-1 3716260 N/A 3716262 predetermined predetermined participant predetermined anti tag western anti tag western blot anti tag western unspecified role unspecified role bait bait physiological level physiological level endogenous level endogenous endogenous endogenous level purified purified GST Tag GST Tag gst tag glutathione s tranferase tag glutathione S-tranferase tag glutathione S-tranferase tag gst tag n-term range n-terminal range n-term range n-term range n-terminal range n-term range false ecoli Escherichia coli (strain K12) N/A 3716263 ms participant Identification by mass spectrometry ms participant western blot western blot Immuno blot Immuno blot unspecified role unspecified role prey prey physiological level physiological level endogenous level endogenous endogenous endogenous level pig-ST Swine testicular cell line (ST cells) st Swine testicular cell line (ST cells) 17 clone 1; 17Cl-1; 17 Cl 1 Sus scrofa normal testicular cell line, established from a male 80-90 days old gestation embryo. This line is useful for the propagation, assay and isolation of porcine parvovirus, transmissible gastroenteritis virus and swine enteroviruses. N/A 3716264 ms participant Identification by mass spectrometry ms participant unspecified role unspecified role prey prey physiological level physiological level endogenous level endogenous endogenous endogenous level pig-ST Swine testicular cell line (ST cells) st Swine testicular cell line (ST cells) 17 clone 1; 17Cl-1; 17 Cl 1 Sus scrofa normal testicular cell line, established from a male 80-90 days old gestation embryo. This line is useful for the propagation, assay and isolation of porcine parvovirus, transmissible gastroenteritis virus and swine enteroviruses. N/A 3716265 ms participant Identification by mass spectrometry ms participant unspecified role unspecified role prey prey physiological level physiological level endogenous level endogenous endogenous endogenous level pig-ST Swine testicular cell line (ST cells) st Swine testicular cell line (ST cells) 17 clone 1; 17Cl-1; 17 Cl 1 Sus scrofa normal testicular cell line, established from a male 80-90 days old gestation embryo. This line is useful for the propagation, assay and isolation of porcine parvovirus, transmissible gastroenteritis virus and swine enteroviruses. association association false false false Fig 1, Tab 1, Fig 3 n-vim-1 3716261 N/A 3716262 immunocytochemistry immunocytochemistry unspecified role unspecified role neutral component neutral component physiological level physiological level endogenous level endogenous endogenous endogenous level infection infection pig-ST Swine testicular cell line (ST cells) st Swine testicular cell line (ST cells) 17 clone 1; 17Cl-1; 17 Cl 1 Sus scrofa normal testicular cell line, established from a male 80-90 days old gestation embryo. This line is useful for the propagation, assay and isolation of porcine parvovirus, transmissible gastroenteritis virus and swine enteroviruses. N/A 3716263 immunocytochemistry immunocytochemistry unspecified role unspecified role neutral component neutral component physiological level physiological level endogenous level endogenous endogenous endogenous level infection infection pig-ST Swine testicular cell line (ST cells) st Swine testicular cell line (ST cells) 17 clone 1; 17Cl-1; 17 Cl 1 Sus scrofa normal testicular cell line, established from a male 80-90 days old gestation embryo. This line is useful for the propagation, assay and isolation of porcine parvovirus, transmissible gastroenteritis virus and swine enteroviruses. colocalization colocalization false false false Fig 5