HPIDb Host Pathogen Interaction database http://www.agbase.msstate.edu/hpi/main.html http://www.agbase.msstate.edu/hpi/main.html vasilenko-2012-1 bovin-fbt cells bovin fetal bovine testicular cells Bovine fbt cells fetal bovine testicular cells anti tag coip anti tag coimmunoprecipitation anti tag coip ms participant Identification by mass spectrometry ms participant Vasilenko NL., Snider M., Labiuk SL., Lobanov VA., Babiuk LA., van Drunen Littel-van den Hurk S. Virus - Publications including interactions involving viral proteins "eTIF3" and "CK2" proteins were also identified as interacting with VP8, but were not added here as the identity of these proteins was not specified. Based on the reference Zheng -2004, with PMID:15207619, the VP8 accession number P30021 from BHV-1 strain P8-2 is used sylvia.vandenhurk@usask.ca Virus research 2012 imex curation Only protein-protein interactions imex curation vasilenko-2012-2 chlae-cos_7 Cercopithecus aethiops simian cells transformed with SV40 Grivet cos_7 cercopithecus aethiops, by transformation with SV40 anti tag coip anti tag coimmunoprecipitation anti tag coip anti tag western anti tag western blot anti tag western Vasilenko NL., Snider M., Labiuk SL., Lobanov VA., Babiuk LA., van Drunen Littel-van den Hurk S. Virus - Publications including interactions involving viral proteins Based on the reference Zheng -2004, with PMID:15207619, the VP8 accession number P30021 from BHV-1 strain P8-2 is used sylvia.vandenhurk@usask.ca Virus research 2012 imex curation Only protein-protein interactions imex curation vasilenko-2012-3 bovin-mdbk Bos taurus mdbk Madin-Darby bovine kidney cells anti bait coip anti bait coimmunoprecipitation anti bait coip western blot western blot Immuno blot Immuno blot Vasilenko NL., Snider M., Labiuk SL., Lobanov VA., Babiuk LA., van Drunen Littel-van den Hurk S. Virus - Publications including interactions involving viral proteins Based on the reference Zheng -2004, with PMID:15207619, the VP8 accession number P30021 from BHV-1 strain P8-2 is used sylvia.vandenhurk@usask.ca Virus research 2012 imex curation Only protein-protein interactions imex curation vasilenko-2012-4 bovin-fbt cells bovin fetal bovine testicular cells Bovine fbt cells fetal bovine testicular cells confocal microscopy confocal microscopy immunostaining immunostaining Vasilenko NL., Snider M., Labiuk SL., Lobanov VA., Babiuk LA., van Drunen Littel-van den Hurk S. Virus - Publications including interactions involving viral proteins Based on the reference Zheng -2004, with PMID:15207619, the VP8 accession number P30021 from BHV-1 strain P8-2 is used sylvia.vandenhurk@usask.ca Virus research 2012 imex curation Only protein-protein interactions imex curation vasilenko-2012-5 bovin-mdbk Bos taurus mdbk Madin-Darby bovine kidney cells confocal microscopy confocal microscopy immunostaining immunostaining Vasilenko NL., Snider M., Labiuk SL., Lobanov VA., Babiuk LA., van Drunen Littel-van den Hurk S. Virus - Publications including interactions involving viral proteins Based on the reference Zheng -2004, with PMID:15207619, the VP8 accession number P30021 from BHV-1 strain P8-2 is used sylvia.vandenhurk@usask.ca Virus research 2012 imex curation Only protein-protein interactions imex curation teg5_bhv1p Tegument protein UL47 UL47 protein protein bhv1p Bovine herpesvirus 1.1 (strain P8-2) (BoHV-1) Infectious bovine rhinotracheitis virus MDAARDGRPERRPRRSGTYRTHPFQRPSARRSLLDALRAADAEAAERPRVRRPRPDFQRPPDEDTSEDENVYDYIDGDSSDSADDYDSDYFTANRGPNHGAGDAMDTDAPPERAPEGGAPQDYLTAHLRAIEALPESAPHRSLLERTARTVYAHEFPPRDLSAGSRAPAQRARRSLRGFPRGGGGGQEPGPDDEGDDAADLREDLVPDEAYAHLERDERLSEGPPLLNMEAAAAAAGERSVVEELFTYAPAQPQVEVPLPRILEGRVRPSAFFAQMPLDALCRTPPNDQRVVRERRAWDMAGTPHGLLITTWSTVDPEFSIGGMYVGAPEGTRPRLVWRRAMKQAMALQYRLGVGGLCRAVDGARMPPTEALLFLAARAAARSAQLPFFVAAGARGRRRAAPARGGGWAAGSHAVHATGRVPHATLFRGSMGSLIYWHELRVMLTAVPALCARYAGAGLQSAELYLLALRHSEAPGYTANERYALSAYLTLFVALAERAVRWLYLAGAHLLGPHPTAAAFREVRAKIPYERLPLGSATLHDAEVETVDSATFQEALAFSALAHVYGEAYVAVRTATTLLMAEYAAHAERRDVREMTAAFLGVGLIAQRLMGSLEPAAELRSRRSGVRGPACPTVREGTLARYSLLADAALPLVRPVSLVEFWEARDGVMRELRLRPVASPPLAGKRRVMELYLSLDSIEALVGREPLGSRPVLGPLVDIAEALADHPHLVTGDGRGPRLGGR ddb1_bovin DNA damage-binding protein 1 DDB1 Damage-specific DNA-binding protein 1 protein protein bovin Bos taurus (Bovine) Bovine MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGMSPLCAIGLWTDISARIAKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH actb_bovin Actin, cytoplasmic 1 ACTB Beta-actin protein protein bovin Bos taurus (Bovine) Bovine MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF vp8-ddb1-1 1876789 N/A 1876794 unspecified role unspecified role bait bait flag tag flag tag flag tag FLAG-tagged FLAG DYKDDDDKV epitope tag DYKDDDDKV epitope tag FLAG FLAG-tagged n-term range n-terminal range n-term range n-term range n-terminal range n-term range false N/A 1876795 unspecified role unspecified role prey prey physical association physical association false false false table 1 vp8-actb-1 1876789 N/A 1876794 unspecified role unspecified role bait bait flag tag flag tag flag tag FLAG-tagged FLAG DYKDDDDKV epitope tag DYKDDDDKV epitope tag FLAG FLAG-tagged n-term range n-terminal range n-term range n-term range n-terminal range n-term range false N/A 1876796 unspecified role unspecified role prey prey physical association physical association false false false results teg5_bhv1c-ddb1-1 1876790 N/A 1876794 unspecified role unspecified role bait bait flag tag flag tag flag tag FLAG-tagged FLAG DYKDDDDKV epitope tag DYKDDDDKV epitope tag FLAG FLAG-tagged n-term range n-terminal range n-term range n-term range n-terminal range n-term range false N/A 1876795 unspecified role unspecified role prey prey n-terminus ha tag ha tag YPYDVPDYA epitope tag YPYDVPDYA epitope tag n-term range n-terminal range n-term range n-term range n-terminal range n-term range false physical association physical association false false false 1A ddb1-teg5_bhv1c-1 1876790 N/A 1876794 unspecified role unspecified role prey prey flag tag flag tag flag tag FLAG-tagged FLAG DYKDDDDKV epitope tag DYKDDDDKV epitope tag FLAG FLAG-tagged n-term range n-terminal range n-term range n-term range n-terminal range n-term range false N/A 1876795 unspecified role unspecified role bait bait n-terminus ha tag ha tag YPYDVPDYA epitope tag YPYDVPDYA epitope tag n-term range n-terminal range n-term range n-term range n-terminal range n-term range false physical association physical association false false false 1A teg5_bhv1c-ddb1-2 1876791 N/A 1876795 unspecified role unspecified role prey prey N/A 1876794 unspecified role unspecified role bait bait physical association physical association false false false 1B ddb1-teg5_bhv1p-1 1876791 N/A 1876795 unspecified role unspecified role bait bait N/A 1876794 unspecified role unspecified role prey prey physical association physical association false false false 1B teg5_bhv1c-ddb1-3 1876792 N/A 1876795 unspecified role unspecified role neutral component neutral component N/A 1876794 tag fluorescence tag visualisation by fluorescence tag fluorescence unspecified role unspecified role neutral component neutral component egfp egfp tag enhanced green fluorescent protein tag enhanced green fluorescent protein EGFP enhanced green fluorescent protein EGFP egfp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined false colocalization colocalization false false false 2 and table 2 ddb1-teg5_bhv1c-2 1876793 N/A 1876795 unspecified role unspecified role neutral component neutral component N/A 1876794 unspecified role unspecified role neutral component neutral component colocalization colocalization false false false 3 and table 3