HPIDb Host Pathogen Interaction database http://www.agbase.msstate.edu/hpi/main.html http://www.agbase.msstate.edu/hpi/main.html saira-2009-1 mouse-p19 Mus musculus embryonic teratocarcinoma cell line, epithelial-like, induced by retinoic acid p19 mouse embryonic teratocarcinoma cellline anti bait coip anti bait coimmunoprecipitation anti bait coip western blot western blot Immuno blot Immuno blot Saira K., Zhou Y., Jones C. Virus - Publications including interactions involving viral proteins Based on authors email, transfected IRF7 is human in origin, and bICP0 is from strain Cooper. As there is no Cooper strain UniProt/Genbank identifier for bICP0, UniProt identifier P29128 has been used as this has 100% match with the sequence (aa 13–51) for bICP0 as given in Reference 18 in this publication -pmid:11172088. cjones@unlnotes.unl.edu cjones@unlnotes.unl.edu. Journal of virology 2009 imex curation Only protein-protein interactions imex curation saira-2009-2 mouse-p19 Mus musculus embryonic teratocarcinoma cell line, epithelial-like, induced by retinoic acid p19 mouse embryonic teratocarcinoma cellline anti tag coip anti tag coimmunoprecipitation anti tag coip western blot western blot Immuno blot Immuno blot Saira K., Zhou Y., Jones C. Virus - Publications including interactions involving viral proteins Based on authors email, transfected IRF7 is human in origin, and bICP0 is from strain Cooper. As there is no Cooper strain UniProt/Genbank identifier for bICP0, UniProt identifier P29128 has been used as this has 100% match with the sequence (aa 13–51) for bICP0 as given in Reference 18 in this publication -pmid:11172088. cjones@unlnotes.unl.edu cjones@unlnotes.unl.edu. Journal of virology 2009 imex curation Only protein-protein interactions imex curation saira-2009-3 mouse-p19 Mus musculus embryonic teratocarcinoma cell line, epithelial-like, induced by retinoic acid p19 mouse embryonic teratocarcinoma cellline confocal microscopy confocal microscopy immunostaining immunostaining Saira K., Zhou Y., Jones C. Virus - Publications including interactions involving viral proteins Based on authors email, transfected IRF7 is human in origin, and bICP0 is from strain Cooper. As there is no Cooper strain UniProt/Genbank identifier for bICP0, UniProt identifier P29128 has been used as this has 100% match with the sequence (aa 13–51) for bICP0 as given in Reference 18 in this publication -pmid:11172088. cjones@unlnotes.unl.edu cjones@unlnotes.unl.edu. Journal of virology 2009 imex curation Only protein-protein interactions imex curation saira-2009-4 bovin-testis Bos taurus testis confocal microscopy confocal microscopy immunostaining immunostaining Saira K., Zhou Y., Jones C. Virus - Publications including interactions involving viral proteins Based on authors email, transfected IRF7 is human in origin, and bICP0 is from strain Cooper. As there is no Cooper strain UniProt/Genbank identifier for bICP0, UniProt identifier P29128 has been used as this has 100% match with the sequence (aa 13–51) for bICP0 as given in Reference 18 in this publication -pmid:11172088. cjones@unlnotes.unl.edu cjones@unlnotes.unl.edu. Journal of virology 2009 imex curation Only protein-protein interactions imex curation saira-2009-5 human-293 Homo sapiens transformed primary embryonal kidney cells Human 293 Transformed human primary embryonal kidney cells. The Cell type named 293 is synonymous with HEK-293. confocal microscopy confocal microscopy immunostaining immunostaining Saira K., Zhou Y., Jones C. Virus - Publications including interactions involving viral proteins Based on authors email, transfected IRF7 is human in origin, and bICP0 is from strain Cooper. As there is no Cooper strain UniProt/Genbank identifier for bICP0, UniProt identifier P29128 has been used as this has 100% match with the sequence (aa 13–51) for bICP0 as given in Reference 18 in this publication -pmid:11172088. cjones@unlnotes.unl.edu cjones@unlnotes.unl.edu. Journal of virology 2009 imex curation Only protein-protein interactions imex curation saira-2009-6 bovin-mdbk Bos taurus mdbk Madin-Darby bovine kidney cells confocal microscopy confocal microscopy immunostaining immunostaining Saira K., Zhou Y., Jones C. Virus - Publications including interactions involving viral proteins Based on authors email, transfected IRF7 is human in origin, and bICP0 is from strain Cooper. As there is no Cooper strain UniProt/Genbank identifier for bICP0, UniProt identifier P29128 has been used as this has 100% match with the sequence (aa 13–51) for bICP0 as given in Reference 18 in this publication -pmid:11172088. cjones@unlnotes.unl.edu cjones@unlnotes.unl.edu. Journal of virology 2009 imex curation Only protein-protein interactions imex curation irf7_human Interferon regulatory factor 7 IRF7 protein protein human Homo sapiens Human MALAPERAAPRVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGDPADPHKVYALSRELCWREGPGTDQTEAEAPAAVPPPQGGPPGPFLAHTHAGLQAPGPLPAPAGDKGDLLLQAVQQSCLADHLLTASWGADPVPTKAPGEGQEGLPLTGACAGGPGLPAGELYGWAVETTPSPGPQPAALTTGEAAAPESPHQAEPYLSPSPSACTAVQEPSPGALDVTIMYKGRTVLQKVVGHPSCTFLYGPPDPAVRATDPQQVAFPSPAELPDQKQLRYTEELLRHVAPGLHLELRGPQLWARRMGKCKVYWEVGGPPGSASPSTPACLLPRNCDTPIFDFRVFFQELVEFRARQRRGSPRYTIYLGFGQDLSAGRPKEKSLVLVKLEPWLCRVHLEGTQREGVSSLDSSSLSLCLSSANSLYDDIECFLMELEQPA icp0_bhv1j E3 ubiquitin-protein ligase ICP0 BICP0 IER 2.9/ER2.6 P135 protein RING-type E3 ubiquitin transferase ICP0 protein protein BoHV-1 Bovine herpesvirus 1.1 (strain Jura) Infectious bovine rhinotracheitis virus MAPPAAAPELGSCCICLDAITGAARALPCLHAFCLACIRRWLEGRPTCPLCKAPVQSLIHSVASDECFEEIPVGGGPGADGALEPDAAVIWGEDYDAGPIDLTAADGEASGAGGEAGAADGSEAGGGAGGAEEAGEARGAGAGRAAGAAGGRAGRGADAAQEFIDRVARGPRLPLLPNTPEHGPGAPYLRRVVEWVEGALVGSFAVTARELAAMTDYVMAMLAECGFDDDGLADAMEPLIGEDDAPAFVRSLLFVAARCVTVGPSHLIPQQSAPPGGRGVVFLDTSDSDSEGSEDDSWSESEESSSGLSTSDLTAIDDTETEPETDAEVESRRTRGASGAARARRPAERQYVSTRGRQTPAVQPAPRSLARRPCGRAAAVSAPPSSRSRGGRRDPRLPAAPRAAPAAQARACSPEPREEGRGAGLGVAAGETAGWGAGSEEGRGERRARLLGEAGPPRVQARRRRRTELDRAPTPAPAPAPAPAPISTVIDLTANAPARPADPAPAAAPGPASAGAQIGTPAAAAAVTAAAAAPSVARSSAPSPAVTAAATSTAAAISTRAPTPSPAGRAPAADPRRAGAPALAGAARAEVGRNGNPGRERRPASAMARGDLDPGPESSAQKRRRTEMEVAAWVRESLLGTPRRSSAALAPQPGGRQGPSLAGLLGRCSGGSAWRQ a8e4q6_bovin IRF7 protein protein bovin Bos taurus (Bovine) Bovine MAEAPDRGTPRVLFGDWLLGEVSSGRYEGLRWLDAARTRFRVPWKHFARKDLGEADSRIFKAWAVARGRWPLRSGGGAPPIPESALRASWKTNFRCALRSTQRFVMLEDNSGDPTDPHKVYKISSEPGCPEGLGFDQGEDEALEDAPPARGGLLGPCLASDTGESLGHRLNPEPCPPSLAGDARDLLIQALQQSCLEDHLLDLTPPEAPDAGPPPEPWQPLEAEPHMGASASACTPMAGEPPLAGPGYSQLGLQPEPSLGALDLSILYKGRTVLQEVVGRPRCVPLYGPSAVAGGAPAPQQVAFPSPAGLPDQKQLHYTEKLLQHVAPGLQLELRGPWLWARRLGKCKVYWEVGGPLGSASTSSPARLLPRDCDTPIFDFGTFFQELLEFRAQRRRGSPHYTIYLGFGQDLSVGRPKEKSLVLVKLEPWLCRAYLEAVQREGVSSLDSGSLSLCLSSSNSLYEDLEHFLEHFLMEVEQAA bicp0-irf7-1 1876755 N/A 1876761 unspecified role unspecified role bait bait N/A 1876762 unspecified role unspecified role prey prey n_terminus flag tag flag tag FLAG-tagged FLAG DYKDDDDKV epitope tag DYKDDDDKV epitope tag FLAG FLAG-tagged n-term range n-terminal range n-term range n-term range n-terminal range n-term range false physical association physical association false false false 2A irf7-bicp0-1 1876756 N/A 1876761 unspecified role unspecified role prey prey N/A 1876762 unspecified role unspecified role bait bait n_terminus flag tag flag tag FLAG-tagged FLAG DYKDDDDKV epitope tag DYKDDDDKV epitope tag FLAG FLAG-tagged n-term range n-terminal range n-term range n-term range n-terminal range n-term range false physical association physical association false false false 2B bicp0-irf7-2 1876757 N/A 1876761 unspecified role unspecified role neutral component neutral component N/A 1876762 unspecified role unspecified role neutral component neutral component n_terminus flag tag flag tag FLAG-tagged FLAG DYKDDDDKV epitope tag DYKDDDDKV epitope tag FLAG FLAG-tagged n-term range n-terminal range n-term range n-term range n-terminal range n-term range false colocalization colocalization false false false 3 bicp0-irf7-4 1876758 N/A 1876761 unspecified role unspecified role neutral component neutral component N/A 1876762 unspecified role unspecified role neutral component neutral component n_terminus flag tag flag tag FLAG-tagged FLAG DYKDDDDKV epitope tag DYKDDDDKV epitope tag FLAG FLAG-tagged n-term range n-terminal range n-term range n-term range n-terminal range n-term range false colocalization colocalization false false false 3 bicp0-irf7-3 1876759 N/A 1876761 unspecified role unspecified role neutral component neutral component N/A 1876762 unspecified role unspecified role neutral component neutral component region required to bind necessary binding region required to bind certain certain sequence position certain certain certain sequence position certain false n_terminus flag tag flag tag FLAG-tagged FLAG DYKDDDDKV epitope tag DYKDDDDKV epitope tag FLAG FLAG-tagged n-term range n-terminal range n-term range n-term range n-terminal range n-term range false colocalization colocalization false false false 3 and 4B bicp0-irf7-5 1876760 N/A 1876763 unspecified role unspecified role neutral component neutral component N/A 1876762 unspecified role unspecified role neutral component neutral component n_terminus flag tag flag tag FLAG-tagged FLAG DYKDDDDKV epitope tag DYKDDDDKV epitope tag FLAG FLAG-tagged n-term range n-terminal range n-term range n-term range n-terminal range n-term range false colocalization colocalization false false false 4D