#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P0A812 uniprotkb:P0A809 intact:EBI-557878|uniprotkb:P08577|ensemblbacteria:AAC74930|ensemblbacteria:BAA15671 intact:EBI-555119|uniprotkb:P08576|ensemblbacteria:AAC74931|ensemblbacteria:BAA15672 psi-mi:ruvb_ecoli(display_long)|uniprotkb:ruvB(gene name)|psi-mi:ruvB(display_short)|uniprotkb:b1860(locus name)|uniprotkb:JW1849(locus name) psi-mi:ruva_ecoli(display_long)|uniprotkb:ruvA(gene name)|psi-mi:ruvA(display_short)|uniprotkb:b1861(locus name)|uniprotkb:JW1850(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Davies et al. (1998) imex:IM-27919|pubmed:9637927 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0486"(UniProt) intact:EBI-25299177|imex:IM-27919-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_416374.1|refseq:WP_000568519.1|dip:DIP-47870N|ensemblbacteria:AAC74930(transcript)|ensemblbacteria:b1860(gene)|ensemblbacteria:BAA15671(gene)|ensemblbacteria:BAA15671(transcript)|go:"GO:0000725"(recombinational repair)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009411"(response to UV)|go:"GO:0009432"(SOS response)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004605(DNA helicase, Holliday junction RuvB type)|interpro:IPR008823(DNA helicase, Holliday junction RuvB type, C-terminal)|interpro:IPR008824(DNA helicase, Holliday junction RuvB type, N-terminal)|interpro:IPR027417|interpro:IPR036388|interpro:IPR036390|interpro:IPR041445 refseq:NP_416375.1|refseq:WP_000580323.1|dip:DIP-48064N|ensemblbacteria:AAC74931(transcript)|ensemblbacteria:b1861(gene)|ensemblbacteria:BAA15672(gene)|ensemblbacteria:BAA15672(transcript)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0009314"(response to radiation)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009379"(Holliday junction helicase complex)|go:"GO:0009432"(SOS response)|go:"GO:0042802"(identical protein binding)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000085(Bacterial DNA recombination protein RuvA)|interpro:IPR003583(Helix-hairpin-helix DNA-binding, class 1)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011114(DNA helicase, Holliday junction RuvA type, C-terminal domain III)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR013849(DNA helicase, Holliday junction RuvA type, domain I, bacterial)|interpro:IPR036267|rcsb pdb:1BDX|rcsb pdb:1C7Y|rcsb pdb:1CUK|rcsb pdb:1D8L|rcsb pdb:1HJP - - - figure legend:Fig 1A|comment:Interaction observed in the presence and absence of duplex DNA or Holliday junction DNA|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/01/03 2020/01/03 rogid:Is8hGLVpuoDAHX8nKzAhBxBJL6w83333 rogid:HKLZjer/zJ8LRziQO5C7ISpkr7883333 rigid:ldWeSGGHpzjze+SpQU1E4rM04ZU false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0A812 uniprotkb:P0A809 intact:EBI-557878|uniprotkb:P08577|ensemblbacteria:AAC74930|ensemblbacteria:BAA15671 intact:EBI-555119|uniprotkb:P08576|ensemblbacteria:AAC74931|ensemblbacteria:BAA15672 psi-mi:ruvb_ecoli(display_long)|uniprotkb:ruvB(gene name)|psi-mi:ruvB(display_short)|uniprotkb:b1860(locus name)|uniprotkb:JW1849(locus name) psi-mi:ruva_ecoli(display_long)|uniprotkb:ruvA(gene name)|psi-mi:ruvA(display_short)|uniprotkb:b1861(locus name)|uniprotkb:JW1850(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Davies et al. (1998) imex:IM-27919|pubmed:9637927 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0486"(UniProt) intact:EBI-25299186|imex:IM-27919-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_416374.1|refseq:WP_000568519.1|dip:DIP-47870N|ensemblbacteria:AAC74930(transcript)|ensemblbacteria:b1860(gene)|ensemblbacteria:BAA15671(gene)|ensemblbacteria:BAA15671(transcript)|go:"GO:0000725"(recombinational repair)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009411"(response to UV)|go:"GO:0009432"(SOS response)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004605(DNA helicase, Holliday junction RuvB type)|interpro:IPR008823(DNA helicase, Holliday junction RuvB type, C-terminal)|interpro:IPR008824(DNA helicase, Holliday junction RuvB type, N-terminal)|interpro:IPR027417|interpro:IPR036388|interpro:IPR036390|interpro:IPR041445 refseq:NP_416375.1|refseq:WP_000580323.1|dip:DIP-48064N|ensemblbacteria:AAC74931(transcript)|ensemblbacteria:b1861(gene)|ensemblbacteria:BAA15672(gene)|ensemblbacteria:BAA15672(transcript)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0009314"(response to radiation)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009379"(Holliday junction helicase complex)|go:"GO:0009432"(SOS response)|go:"GO:0042802"(identical protein binding)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000085(Bacterial DNA recombination protein RuvA)|interpro:IPR003583(Helix-hairpin-helix DNA-binding, class 1)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011114(DNA helicase, Holliday junction RuvA type, C-terminal domain III)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR013849(DNA helicase, Holliday junction RuvA type, domain I, bacterial)|interpro:IPR036267|rcsb pdb:1BDX|rcsb pdb:1C7Y|rcsb pdb:1CUK|rcsb pdb:1D8L|rcsb pdb:1HJP - - - figure legend:Fig 1B|comment:Interaction observed in the presence and absence of duplex DNA or Holliday junction DNA|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/01/03 2020/01/03 rogid:Is8hGLVpuoDAHX8nKzAhBxBJL6w83333 rogid:HKLZjer/zJ8LRziQO5C7ISpkr7883333 rigid:ldWeSGGHpzjze+SpQU1E4rM04ZU false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0A814 uniprotkb:P0A809 intact:EBI-1123014|uniprotkb:P24239|ensemblbacteria:AAC74933|ensemblbacteria:BAA15674 intact:EBI-555119|uniprotkb:P08576|ensemblbacteria:AAC74931|ensemblbacteria:BAA15672 psi-mi:ruvc_ecoli(display_long)|uniprotkb:ruvC(gene name)|psi-mi:ruvC(display_short)|uniprotkb:b1863(locus name)|uniprotkb:JW1852(locus name)|uniprotkb:Holliday junction nuclease RuvC(gene name synonym)|uniprotkb:Holliday junction resolvase RuvC(gene name synonym) psi-mi:ruva_ecoli(display_long)|uniprotkb:ruvA(gene name)|psi-mi:ruvA(display_short)|uniprotkb:b1861(locus name)|uniprotkb:JW1850(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Davies et al. (1998) imex:IM-27919|pubmed:9637927 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0486"(UniProt) intact:EBI-25299220|imex:IM-27919-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001295503.1|ensemblbacteria:AAC74933(transcript)|ensemblbacteria:b1863(gene)|ensemblbacteria:BAA15674(gene)|ensemblbacteria:BAA15674(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0008821"(crossover junction endodeoxyribonuclease activity)|go:"GO:0009314"(response to radiation)|go:"GO:0048476"(Holliday junction resolvase complex)|interpro:IPR002176(Crossover junction endodeoxyribonuclease RuvC)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR020563|interpro:IPR036397|rcsb pdb:1HJR|refseq:NP_416377.1|dip:DIP-35952N refseq:NP_416375.1|refseq:WP_000580323.1|dip:DIP-48064N|ensemblbacteria:AAC74931(transcript)|ensemblbacteria:b1861(gene)|ensemblbacteria:BAA15672(gene)|ensemblbacteria:BAA15672(transcript)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0009314"(response to radiation)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009379"(Holliday junction helicase complex)|go:"GO:0009432"(SOS response)|go:"GO:0042802"(identical protein binding)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000085(Bacterial DNA recombination protein RuvA)|interpro:IPR003583(Helix-hairpin-helix DNA-binding, class 1)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011114(DNA helicase, Holliday junction RuvA type, C-terminal domain III)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR013849(DNA helicase, Holliday junction RuvA type, domain I, bacterial)|interpro:IPR036267|rcsb pdb:1BDX|rcsb pdb:1C7Y|rcsb pdb:1CUK|rcsb pdb:1D8L|rcsb pdb:1HJP - - - figure legend:Fig 1A|comment:In the presence of Holliday junction DNA, RuvA formed a complex with RuvC that was immunoprecipitated with the anti-RuvA or the anti-RuvC. Interaction only observed in the presence of Holliday junction DNA, but not duplex DNA.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/01/03 2020/01/03 rogid:qot36+1fBwETwWSE//kqV3fjCMI83333 rogid:HKLZjer/zJ8LRziQO5C7ISpkr7883333 rigid:BWuQm9YmyIeoZqfyDA5LbH0Gwcc false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0A814 uniprotkb:P0A809 intact:EBI-1123014|uniprotkb:P24239|ensemblbacteria:AAC74933|ensemblbacteria:BAA15674 intact:EBI-555119|uniprotkb:P08576|ensemblbacteria:AAC74931|ensemblbacteria:BAA15672 psi-mi:ruvc_ecoli(display_long)|uniprotkb:ruvC(gene name)|psi-mi:ruvC(display_short)|uniprotkb:b1863(locus name)|uniprotkb:JW1852(locus name)|uniprotkb:Holliday junction nuclease RuvC(gene name synonym)|uniprotkb:Holliday junction resolvase RuvC(gene name synonym) psi-mi:ruva_ecoli(display_long)|uniprotkb:ruvA(gene name)|psi-mi:ruvA(display_short)|uniprotkb:b1861(locus name)|uniprotkb:JW1850(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Davies et al. (1998) imex:IM-27919|pubmed:9637927 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0486"(UniProt) intact:EBI-25299225|imex:IM-27919-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001295503.1|ensemblbacteria:AAC74933(transcript)|ensemblbacteria:b1863(gene)|ensemblbacteria:BAA15674(gene)|ensemblbacteria:BAA15674(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0008821"(crossover junction endodeoxyribonuclease activity)|go:"GO:0009314"(response to radiation)|go:"GO:0048476"(Holliday junction resolvase complex)|interpro:IPR002176(Crossover junction endodeoxyribonuclease RuvC)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR020563|interpro:IPR036397|rcsb pdb:1HJR|refseq:NP_416377.1|dip:DIP-35952N refseq:NP_416375.1|refseq:WP_000580323.1|dip:DIP-48064N|ensemblbacteria:AAC74931(transcript)|ensemblbacteria:b1861(gene)|ensemblbacteria:BAA15672(gene)|ensemblbacteria:BAA15672(transcript)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0009314"(response to radiation)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009379"(Holliday junction helicase complex)|go:"GO:0009432"(SOS response)|go:"GO:0042802"(identical protein binding)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000085(Bacterial DNA recombination protein RuvA)|interpro:IPR003583(Helix-hairpin-helix DNA-binding, class 1)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011114(DNA helicase, Holliday junction RuvA type, C-terminal domain III)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR013849(DNA helicase, Holliday junction RuvA type, domain I, bacterial)|interpro:IPR036267|rcsb pdb:1BDX|rcsb pdb:1C7Y|rcsb pdb:1CUK|rcsb pdb:1D8L|rcsb pdb:1HJP - - - figure legend:Fig 1C|comment:In the presence of Holliday junction DNA, RuvA formed a complex with RuvC that was immunoprecipitated with the anti-RuvA or the anti-RuvC. Interaction only observed in the presence of Holliday junction DNA but not duplex DNA.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/01/03 2020/01/03 rogid:qot36+1fBwETwWSE//kqV3fjCMI83333 rogid:HKLZjer/zJ8LRziQO5C7ISpkr7883333 rigid:BWuQm9YmyIeoZqfyDA5LbH0Gwcc false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0A809 uniprotkb:P0A812 intact:EBI-555119|uniprotkb:P08576|ensemblbacteria:AAC74931|ensemblbacteria:BAA15672 intact:EBI-557878|uniprotkb:P08577|ensemblbacteria:AAC74930|ensemblbacteria:BAA15671 psi-mi:ruva_ecoli(display_long)|uniprotkb:ruvA(gene name)|psi-mi:ruvA(display_short)|uniprotkb:b1861(locus name)|uniprotkb:JW1850(locus name) psi-mi:ruvb_ecoli(display_long)|uniprotkb:ruvB(gene name)|psi-mi:ruvB(display_short)|uniprotkb:b1860(locus name)|uniprotkb:JW1849(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Davies et al. (1998) imex:IM-27919|pubmed:9637927 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-25299230|imex:IM-27919-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_416375.1|refseq:WP_000580323.1|dip:DIP-48064N|ensemblbacteria:AAC74931(transcript)|ensemblbacteria:b1861(gene)|ensemblbacteria:BAA15672(gene)|ensemblbacteria:BAA15672(transcript)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0009314"(response to radiation)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009379"(Holliday junction helicase complex)|go:"GO:0009432"(SOS response)|go:"GO:0042802"(identical protein binding)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000085(Bacterial DNA recombination protein RuvA)|interpro:IPR003583(Helix-hairpin-helix DNA-binding, class 1)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011114(DNA helicase, Holliday junction RuvA type, C-terminal domain III)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR013849(DNA helicase, Holliday junction RuvA type, domain I, bacterial)|interpro:IPR036267|rcsb pdb:1BDX|rcsb pdb:1C7Y|rcsb pdb:1CUK|rcsb pdb:1D8L|rcsb pdb:1HJP refseq:NP_416374.1|refseq:WP_000568519.1|dip:DIP-47870N|ensemblbacteria:AAC74930(transcript)|ensemblbacteria:b1860(gene)|ensemblbacteria:BAA15671(gene)|ensemblbacteria:BAA15671(transcript)|go:"GO:0000725"(recombinational repair)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009411"(response to UV)|go:"GO:0009432"(SOS response)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004605(DNA helicase, Holliday junction RuvB type)|interpro:IPR008823(DNA helicase, Holliday junction RuvB type, C-terminal)|interpro:IPR008824(DNA helicase, Holliday junction RuvB type, N-terminal)|interpro:IPR027417|interpro:IPR036388|interpro:IPR036390|interpro:IPR041445 - - - figure legend:Fig 1A|comment:In the presence of Holliday junction DNA, RuvA formed a complex with RuvC that was immunoprecipitated with the anti-RuvA or the anti-RuvC. Interaction only observed in the presence of Holliday junction DNA but not duplex DNA.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/01/03 2020/01/03 rogid:HKLZjer/zJ8LRziQO5C7ISpkr7883333 rogid:Is8hGLVpuoDAHX8nKzAhBxBJL6w83333 rigid:baThmZjsOY78Os//2DdqoSwH11s false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0A809 uniprotkb:P0A814 intact:EBI-555119|uniprotkb:P08576|ensemblbacteria:AAC74931|ensemblbacteria:BAA15672 intact:EBI-1123014|uniprotkb:P24239|ensemblbacteria:AAC74933|ensemblbacteria:BAA15674 psi-mi:ruva_ecoli(display_long)|uniprotkb:ruvA(gene name)|psi-mi:ruvA(display_short)|uniprotkb:b1861(locus name)|uniprotkb:JW1850(locus name) psi-mi:ruvc_ecoli(display_long)|uniprotkb:ruvC(gene name)|psi-mi:ruvC(display_short)|uniprotkb:b1863(locus name)|uniprotkb:JW1852(locus name)|uniprotkb:Holliday junction nuclease RuvC(gene name synonym)|uniprotkb:Holliday junction resolvase RuvC(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Davies et al. (1998) imex:IM-27919|pubmed:9637927 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-25299230|imex:IM-27919-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_416375.1|refseq:WP_000580323.1|dip:DIP-48064N|ensemblbacteria:AAC74931(transcript)|ensemblbacteria:b1861(gene)|ensemblbacteria:BAA15672(gene)|ensemblbacteria:BAA15672(transcript)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0009314"(response to radiation)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009379"(Holliday junction helicase complex)|go:"GO:0009432"(SOS response)|go:"GO:0042802"(identical protein binding)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000085(Bacterial DNA recombination protein RuvA)|interpro:IPR003583(Helix-hairpin-helix DNA-binding, class 1)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011114(DNA helicase, Holliday junction RuvA type, C-terminal domain III)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR013849(DNA helicase, Holliday junction RuvA type, domain I, bacterial)|interpro:IPR036267|rcsb pdb:1BDX|rcsb pdb:1C7Y|rcsb pdb:1CUK|rcsb pdb:1D8L|rcsb pdb:1HJP refseq:WP_001295503.1|ensemblbacteria:AAC74933(transcript)|ensemblbacteria:b1863(gene)|ensemblbacteria:BAA15674(gene)|ensemblbacteria:BAA15674(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0008821"(crossover junction endodeoxyribonuclease activity)|go:"GO:0009314"(response to radiation)|go:"GO:0048476"(Holliday junction resolvase complex)|interpro:IPR002176(Crossover junction endodeoxyribonuclease RuvC)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR020563|interpro:IPR036397|rcsb pdb:1HJR|refseq:NP_416377.1|dip:DIP-35952N - - - figure legend:Fig 1A|comment:In the presence of Holliday junction DNA, RuvA formed a complex with RuvC that was immunoprecipitated with the anti-RuvA or the anti-RuvC. Interaction only observed in the presence of Holliday junction DNA but not duplex DNA.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/01/03 2020/01/03 rogid:HKLZjer/zJ8LRziQO5C7ISpkr7883333 rogid:qot36+1fBwETwWSE//kqV3fjCMI83333 rigid:baThmZjsOY78Os//2DdqoSwH11s false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0A812 uniprotkb:P0A814 intact:EBI-557878|uniprotkb:P08577|ensemblbacteria:AAC74930|ensemblbacteria:BAA15671 intact:EBI-1123014|uniprotkb:P24239|ensemblbacteria:AAC74933|ensemblbacteria:BAA15674 psi-mi:ruvb_ecoli(display_long)|uniprotkb:ruvB(gene name)|psi-mi:ruvB(display_short)|uniprotkb:b1860(locus name)|uniprotkb:JW1849(locus name) psi-mi:ruvc_ecoli(display_long)|uniprotkb:ruvC(gene name)|psi-mi:ruvC(display_short)|uniprotkb:b1863(locus name)|uniprotkb:JW1852(locus name)|uniprotkb:Holliday junction nuclease RuvC(gene name synonym)|uniprotkb:Holliday junction resolvase RuvC(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Davies et al. (1998) imex:IM-27919|pubmed:9637927 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-25299238|imex:IM-27919-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_416374.1|refseq:WP_000568519.1|dip:DIP-47870N|ensemblbacteria:AAC74930(transcript)|ensemblbacteria:b1860(gene)|ensemblbacteria:BAA15671(gene)|ensemblbacteria:BAA15671(transcript)|go:"GO:0000725"(recombinational repair)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009411"(response to UV)|go:"GO:0009432"(SOS response)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004605(DNA helicase, Holliday junction RuvB type)|interpro:IPR008823(DNA helicase, Holliday junction RuvB type, C-terminal)|interpro:IPR008824(DNA helicase, Holliday junction RuvB type, N-terminal)|interpro:IPR027417|interpro:IPR036388|interpro:IPR036390|interpro:IPR041445 refseq:WP_001295503.1|ensemblbacteria:AAC74933(transcript)|ensemblbacteria:b1863(gene)|ensemblbacteria:BAA15674(gene)|ensemblbacteria:BAA15674(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0008821"(crossover junction endodeoxyribonuclease activity)|go:"GO:0009314"(response to radiation)|go:"GO:0048476"(Holliday junction resolvase complex)|interpro:IPR002176(Crossover junction endodeoxyribonuclease RuvC)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR020563|interpro:IPR036397|rcsb pdb:1HJR|refseq:NP_416377.1|dip:DIP-35952N - - - figure legend:Fig 1B|comment:Interaction only observed in the presence of Holliday junction DNA but not duplex DNA.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/01/03 2020/01/03 rogid:Is8hGLVpuoDAHX8nKzAhBxBJL6w83333 rogid:qot36+1fBwETwWSE//kqV3fjCMI83333 rigid:baThmZjsOY78Os//2DdqoSwH11s false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0A812 uniprotkb:P0A809 intact:EBI-557878|uniprotkb:P08577|ensemblbacteria:AAC74930|ensemblbacteria:BAA15671 intact:EBI-555119|uniprotkb:P08576|ensemblbacteria:AAC74931|ensemblbacteria:BAA15672 psi-mi:ruvb_ecoli(display_long)|uniprotkb:ruvB(gene name)|psi-mi:ruvB(display_short)|uniprotkb:b1860(locus name)|uniprotkb:JW1849(locus name) psi-mi:ruva_ecoli(display_long)|uniprotkb:ruvA(gene name)|psi-mi:ruvA(display_short)|uniprotkb:b1861(locus name)|uniprotkb:JW1850(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Davies et al. (1998) imex:IM-27919|pubmed:9637927 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-25299238|imex:IM-27919-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_416374.1|refseq:WP_000568519.1|dip:DIP-47870N|ensemblbacteria:AAC74930(transcript)|ensemblbacteria:b1860(gene)|ensemblbacteria:BAA15671(gene)|ensemblbacteria:BAA15671(transcript)|go:"GO:0000725"(recombinational repair)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009411"(response to UV)|go:"GO:0009432"(SOS response)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004605(DNA helicase, Holliday junction RuvB type)|interpro:IPR008823(DNA helicase, Holliday junction RuvB type, C-terminal)|interpro:IPR008824(DNA helicase, Holliday junction RuvB type, N-terminal)|interpro:IPR027417|interpro:IPR036388|interpro:IPR036390|interpro:IPR041445 refseq:NP_416375.1|refseq:WP_000580323.1|dip:DIP-48064N|ensemblbacteria:AAC74931(transcript)|ensemblbacteria:b1861(gene)|ensemblbacteria:BAA15672(gene)|ensemblbacteria:BAA15672(transcript)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0009314"(response to radiation)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009379"(Holliday junction helicase complex)|go:"GO:0009432"(SOS response)|go:"GO:0042802"(identical protein binding)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000085(Bacterial DNA recombination protein RuvA)|interpro:IPR003583(Helix-hairpin-helix DNA-binding, class 1)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011114(DNA helicase, Holliday junction RuvA type, C-terminal domain III)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR013849(DNA helicase, Holliday junction RuvA type, domain I, bacterial)|interpro:IPR036267|rcsb pdb:1BDX|rcsb pdb:1C7Y|rcsb pdb:1CUK|rcsb pdb:1D8L|rcsb pdb:1HJP - - - figure legend:Fig 1B|comment:Interaction only observed in the presence of Holliday junction DNA but not duplex DNA.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/01/03 2020/01/03 rogid:Is8hGLVpuoDAHX8nKzAhBxBJL6w83333 rogid:HKLZjer/zJ8LRziQO5C7ISpkr7883333 rigid:baThmZjsOY78Os//2DdqoSwH11s false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0A814 uniprotkb:P0A812 intact:EBI-1123014|uniprotkb:P24239|ensemblbacteria:AAC74933|ensemblbacteria:BAA15674 intact:EBI-557878|uniprotkb:P08577|ensemblbacteria:AAC74930|ensemblbacteria:BAA15671 psi-mi:ruvc_ecoli(display_long)|uniprotkb:ruvC(gene name)|psi-mi:ruvC(display_short)|uniprotkb:b1863(locus name)|uniprotkb:JW1852(locus name)|uniprotkb:Holliday junction nuclease RuvC(gene name synonym)|uniprotkb:Holliday junction resolvase RuvC(gene name synonym) psi-mi:ruvb_ecoli(display_long)|uniprotkb:ruvB(gene name)|psi-mi:ruvB(display_short)|uniprotkb:b1860(locus name)|uniprotkb:JW1849(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Davies et al. (1998) imex:IM-27919|pubmed:9637927 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-25299244|imex:IM-27919-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001295503.1|ensemblbacteria:AAC74933(transcript)|ensemblbacteria:b1863(gene)|ensemblbacteria:BAA15674(gene)|ensemblbacteria:BAA15674(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0008821"(crossover junction endodeoxyribonuclease activity)|go:"GO:0009314"(response to radiation)|go:"GO:0048476"(Holliday junction resolvase complex)|interpro:IPR002176(Crossover junction endodeoxyribonuclease RuvC)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR020563|interpro:IPR036397|rcsb pdb:1HJR|refseq:NP_416377.1|dip:DIP-35952N refseq:NP_416374.1|refseq:WP_000568519.1|dip:DIP-47870N|ensemblbacteria:AAC74930(transcript)|ensemblbacteria:b1860(gene)|ensemblbacteria:BAA15671(gene)|ensemblbacteria:BAA15671(transcript)|go:"GO:0000725"(recombinational repair)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009411"(response to UV)|go:"GO:0009432"(SOS response)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004605(DNA helicase, Holliday junction RuvB type)|interpro:IPR008823(DNA helicase, Holliday junction RuvB type, C-terminal)|interpro:IPR008824(DNA helicase, Holliday junction RuvB type, N-terminal)|interpro:IPR027417|interpro:IPR036388|interpro:IPR036390|interpro:IPR041445 - - - figure legend:Fig 1C|comment:Interaction only observed in the presence of Holliday junction DNA but not duplex DNA.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/01/03 2020/01/03 rogid:qot36+1fBwETwWSE//kqV3fjCMI83333 rogid:Is8hGLVpuoDAHX8nKzAhBxBJL6w83333 rigid:baThmZjsOY78Os//2DdqoSwH11s false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0A814 uniprotkb:P0A809 intact:EBI-1123014|uniprotkb:P24239|ensemblbacteria:AAC74933|ensemblbacteria:BAA15674 intact:EBI-555119|uniprotkb:P08576|ensemblbacteria:AAC74931|ensemblbacteria:BAA15672 psi-mi:ruvc_ecoli(display_long)|uniprotkb:ruvC(gene name)|psi-mi:ruvC(display_short)|uniprotkb:b1863(locus name)|uniprotkb:JW1852(locus name)|uniprotkb:Holliday junction nuclease RuvC(gene name synonym)|uniprotkb:Holliday junction resolvase RuvC(gene name synonym) psi-mi:ruva_ecoli(display_long)|uniprotkb:ruvA(gene name)|psi-mi:ruvA(display_short)|uniprotkb:b1861(locus name)|uniprotkb:JW1850(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Davies et al. (1998) imex:IM-27919|pubmed:9637927 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-25299244|imex:IM-27919-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001295503.1|ensemblbacteria:AAC74933(transcript)|ensemblbacteria:b1863(gene)|ensemblbacteria:BAA15674(gene)|ensemblbacteria:BAA15674(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0008821"(crossover junction endodeoxyribonuclease activity)|go:"GO:0009314"(response to radiation)|go:"GO:0048476"(Holliday junction resolvase complex)|interpro:IPR002176(Crossover junction endodeoxyribonuclease RuvC)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR020563|interpro:IPR036397|rcsb pdb:1HJR|refseq:NP_416377.1|dip:DIP-35952N refseq:NP_416375.1|refseq:WP_000580323.1|dip:DIP-48064N|ensemblbacteria:AAC74931(transcript)|ensemblbacteria:b1861(gene)|ensemblbacteria:BAA15672(gene)|ensemblbacteria:BAA15672(transcript)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0000725"(recombinational repair)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0009314"(response to radiation)|go:"GO:0009378"(four-way junction helicase activity)|go:"GO:0009379"(Holliday junction helicase complex)|go:"GO:0009432"(SOS response)|go:"GO:0042802"(identical protein binding)|go:"GO:0048476"(Holliday junction resolvase complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000085(Bacterial DNA recombination protein RuvA)|interpro:IPR003583(Helix-hairpin-helix DNA-binding, class 1)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011114(DNA helicase, Holliday junction RuvA type, C-terminal domain III)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR013849(DNA helicase, Holliday junction RuvA type, domain I, bacterial)|interpro:IPR036267|rcsb pdb:1BDX|rcsb pdb:1C7Y|rcsb pdb:1CUK|rcsb pdb:1D8L|rcsb pdb:1HJP - - - figure legend:Fig 1C|comment:Interaction only observed in the presence of Holliday junction DNA but not duplex DNA.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/01/03 2020/01/03 rogid:qot36+1fBwETwWSE//kqV3fjCMI83333 rogid:HKLZjer/zJ8LRziQO5C7ISpkr7883333 rigid:baThmZjsOY78Os//2DdqoSwH11s false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot)