#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q12406 uniprotkb:Q05123 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-2972|uniprotkb:D6VZK8|ensemblfungi:YMR033W psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:arp9_yeast(display_long)|uniprotkb:ARP9(gene name)|psi-mi:ARP9(display_short)|uniprotkb:SWP59(gene name synonym)|uniprotkb:YMR033W(locus name)|uniprotkb:YM9973.07(orf name)|uniprotkb:Chromatin structure-remodeling complex protein ARP9(gene name synonym)|uniprotkb:SWI/SNF complex component ARP9(gene name synonym) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-25505822|emdb:EMD-20935|emdb:EMD-20934|wwpdb:6UXW|imex:IM-28044-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_013747.1|sgd:S000004636|dip:DIP-6709N|mint:Q05123|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858|ensemblfungi:YMR033W(gene)|ensemblfungi:YMR033W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016586"(RSC-type complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4 wwpdb:6UXV(subset)|emdb:EMD-20933(subset) crc64:8E105921576FA213 crc64:EE1AB154A906420E figure legend:Supplementary Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/04/08 2020/06/04 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:bn+KSKckXTEdvwOpf5DiKsRy484559292 rigid:fYhznj+F24btXbO5hXNyvjNBJ6o false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:Q12406 uniprotkb:P06897 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-1251194|uniprotkb:Q3B8I8 psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:h2a1_xenla(display_long) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-25505822|emdb:EMD-20935|emdb:EMD-20934|wwpdb:6UXW|imex:IM-28044-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_001089684.1|dip:DIP-39144N|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR002119(Histone H2A)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|interpro:IPR032454|interpro:IPR032458|rcsb pdb:1AOI|rcsb pdb:1KX3|rcsb pdb:1KX4|rcsb pdb:1KX5|rcsb pdb:1M18|rcsb pdb:1M19|rcsb pdb:1M1A|rcsb pdb:1P34|rcsb pdb:1P3A|rcsb pdb:1P3B|rcsb pdb:1P3F|rcsb pdb:1P3G|rcsb pdb:1P3I|rcsb pdb:1P3K|rcsb pdb:1P3L|rcsb pdb:1P3M|rcsb pdb:1P3O|rcsb pdb:1P3P|rcsb pdb:1S32|rcsb pdb:1ZBB|rcsb pdb:1ZLA|rcsb pdb:2FJ7|rcsb pdb:2NZD|rcsb pdb:3B6F|rcsb pdb:3B6G|rcsb pdb:3C1B|rcsb pdb:3C1C|rcsb pdb:3KUY|rcsb pdb:3KWQ|rcsb pdb:3LJA|rcsb pdb:3MNN|rcsb pdb:3O62|rcsb pdb:3REH|rcsb pdb:3REI|rcsb pdb:3REJ|rcsb pdb:3REK|rcsb pdb:3REL|rcsb pdb:3TU4|rcsb pdb:3UT9|rcsb pdb:3UTA|rcsb pdb:3UTB|rcsb pdb:4J8U|rcsb pdb:4J8V|rcsb pdb:4J8W|rcsb pdb:4J8X|rcsb pdb:4LD9|rcsb pdb:4R8P|rcsb pdb:4WU8|rcsb pdb:4WU9|rcsb pdb:4XUJ|rcsb pdb:4XZQ|rcsb pdb:4YS3|rcsb pdb:4Z66|rcsb pdb:4ZUX|rcsb pdb:5CP6|rcsb pdb:5DNM|rcsb pdb:5DNN|rcsb pdb:5E5A|rcsb pdb:5F99|rcsb pdb:5G2E|rcsb pdb:5HQ2|rcsb pdb:5MLU|rcsb pdb:5NL0|rcsb pdb:5O9G|rcsb pdb:5OMX|rcsb pdb:5ONG|rcsb pdb:5ONW|rcsb pdb:5OXV|rcsb pdb:5OY7|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5XF6|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:6FQ5|rcsb pdb:6FQ6|rcsb pdb:6FQ8|rcsb pdb:6IRO|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6KIU|rcsb pdb:6KIV|rcsb pdb:6KIW|rcsb pdb:6KIX|rcsb pdb:6KIZ|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6LTJ|rcsb pdb:6N1Z|rcsb pdb:6NE3|rcsb pdb:6NJ9|rcsb pdb:6NN6|rcsb pdb:6NOG|rcsb pdb:6NQA|rcsb pdb:6NZO|rcsb pdb:6O96|rcsb pdb:6OM3|rcsb pdb:6PA7|rcsb pdb:6PWV|rcsb pdb:6PWW|rcsb pdb:6PWX|rcsb pdb:6PX1|rcsb pdb:6PX3|rcsb pdb:6R1T|rcsb pdb:6R1U|rcsb pdb:6R25|rcsb pdb:6RYR|rcsb pdb:6RYU|rcsb pdb:6S01|rcsb pdb:6T9L|rcsb pdb:6FTX|rcsb pdb:6G0L|rcsb pdb:6I84|rcsb pdb:6TDA|rcsb pdb:6TEM|rcsb pdb:6UXW|rcsb pdb:6VEN|rcsb pdb:6VYP|rcsb pdb:6W4L|rcsb pdb:6W5M|rcsb pdb:6W5N|rcsb pdb:6WKR|rcsb pdb:6WZ9|rcsb pdb:6X0N|rcsb pdb:6Z6P|rcsb pdb:6ZHX|rcsb pdb:6ZHY|rcsb pdb:7CRO|rcsb pdb:7CRP|rcsb pdb:7CRQ|rcsb pdb:7CRR|rcsb pdb:7K6P|rcsb pdb:7K6Q|rcsb pdb:6WZ5 wwpdb:6UXV(subset)|emdb:EMD-20933(subset) crc64:8E105921576FA213 - figure legend:Supplementary Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/04/08 2020/06/04 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:IstEQHlz7X72xddS8qj3PuOQ0H08355 rigid:fYhznj+F24btXbO5hXNyvjNBJ6o false - - 1 2 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:0396"(predetermined participant)|psi-mi:"MI:2287"(identification by structure determination) uniprotkb:Q12406 uniprotkb:P02281 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-1251201|uniprotkb:Q6AZT0 psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:h2b11_xenla(display_long) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-25505822|emdb:EMD-20935|emdb:EMD-20934|wwpdb:6UXW|imex:IM-28044-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_001086753.1|dip:DIP-38577N|rcsb pdb:1ZLA|rcsb pdb:2F8N|rcsb pdb:2FJ7|rcsb pdb:2NZD|rcsb pdb:3B6F|rcsb pdb:3B6G|rcsb pdb:3KUY|rcsb pdb:3KWQ|rcsb pdb:3KXB|rcsb pdb:3LEL|rcsb pdb:3LJA|rcsb pdb:3LZ0|rcsb pdb:3LZ1|rcsb pdb:3MGP|rcsb pdb:3MGQ|rcsb pdb:3MGR|rcsb pdb:3MGS|rcsb pdb:3MNN|rcsb pdb:3MVD|rcsb pdb:3O62|rcsb pdb:3REH|rcsb pdb:3REI|rcsb pdb:3REJ|rcsb pdb:3REK|rcsb pdb:3REL|rcsb pdb:3TU4|rcsb pdb:3UT9|rcsb pdb:3UTA|rcsb pdb:3UTB|rcsb pdb:4J8U|rcsb pdb:4J8V|rcsb pdb:4J8W|rcsb pdb:4J8X|rcsb pdb:4KGC|rcsb pdb:4KHA|rcsb pdb:4LD9|rcsb pdb:4R8P|rcsb pdb:4WU8|rcsb pdb:4WU9|rcsb pdb:4XUJ|rcsb pdb:6PWV|rcsb pdb:6PWW|rcsb pdb:6PWX|rcsb pdb:6PX1|rcsb pdb:6PX3|rcsb pdb:6R1T|rcsb pdb:6R1U|rcsb pdb:6R25|rcsb pdb:6RYR|rcsb pdb:6RYU|rcsb pdb:6S01|rcsb pdb:6T9L|rcsb pdb:6TDA|rcsb pdb:6TEM|rcsb pdb:6UGM|rcsb pdb:6UH5|rcsb pdb:6UXW|rcsb pdb:6VEN|rcsb pdb:6VYP|rcsb pdb:6W4L|rcsb pdb:6W5I|rcsb pdb:6W5M|rcsb pdb:6W5N|rcsb pdb:6WKR|rcsb pdb:6WZ5|rcsb pdb:6WZ9|rcsb pdb:6X0N|rcsb pdb:6ZHX|rcsb pdb:6ZHY|rcsb pdb:7AT8|rcsb pdb:7CRO|rcsb pdb:7CRP|rcsb pdb:7CRQ|rcsb pdb:6PA7|rcsb pdb:7CRR|rcsb pdb:7E8I|rcsb pdb:7K6P|rcsb pdb:7K6Q|rcsb pdb:4Z66|rcsb pdb:4ZUX|rcsb pdb:5CP6|rcsb pdb:5DNM|rcsb pdb:5DNN|rcsb pdb:5E5A|rcsb pdb:5F99|rcsb pdb:5G2E|rcsb pdb:5HQ2|rcsb pdb:5NL0|rcsb pdb:5O9G|rcsb pdb:5OMX|rcsb pdb:5ONG|rcsb pdb:5ONW|rcsb pdb:5OXV|rcsb pdb:5OY7|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5XF6|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6ESF|rcsb pdb:6ESG|rcsb pdb:6ESH|rcsb pdb:6ESI|rcsb pdb:6FQ5|rcsb pdb:6FQ6|rcsb pdb:6FQ8|rcsb pdb:6I84|rcsb pdb:6IRO|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6J99|rcsb pdb:6JM9|rcsb pdb:6JMA|rcsb pdb:6JYL|rcsb pdb:6K01|rcsb pdb:6K1P|rcsb pdb:6KIU|rcsb pdb:6KIV|rcsb pdb:6KIW|rcsb pdb:6KIX|rcsb pdb:4XZQ|rcsb pdb:6KIZ|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6LTJ|rcsb pdb:4YS3|rcsb pdb:6N1Z|rcsb pdb:6NJ9|rcsb pdb:6NN6|rcsb pdb:6NOG|rcsb pdb:6NQA|rcsb pdb:6NZO|rcsb pdb:6O96|rcsb pdb:6OM3|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR000558(Histone H2B)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1AOI|rcsb pdb:1F66|rcsb pdb:1KX3|rcsb pdb:1KX4|rcsb pdb:1KX5|rcsb pdb:1M18|rcsb pdb:1M19|rcsb pdb:1M1A|rcsb pdb:1P34|rcsb pdb:1P3A|rcsb pdb:1P3B|rcsb pdb:1P3F|rcsb pdb:1P3G|rcsb pdb:1P3I|rcsb pdb:1P3K|rcsb pdb:1P3L|rcsb pdb:1P3M|rcsb pdb:1P3O|rcsb pdb:1P3P|rcsb pdb:1S32|rcsb pdb:1ZBB wwpdb:6UXV(subset)|emdb:EMD-20933(subset) crc64:8E105921576FA213 - figure legend:Supplementary Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/04/08 2020/06/04 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:+nkA0I7sW2isaEdOjTHa7+jcsDw8355 rigid:fYhznj+F24btXbO5hXNyvjNBJ6o false - - 1 2 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:Q12406 uniprotkb:P84233 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-350041|uniprotkb:P02295|uniprotkb:P02297|uniprotkb:P16105|uniprotkb:P17269|uniprotkb:A4FVE2|uniprotkb:P17320 psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:h32_xenla(display_long) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-25505822|emdb:EMD-20935|emdb:EMD-20934|wwpdb:6UXW|imex:IM-28044-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_001091428.1|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:5DNM|rcsb pdb:5DNN|rcsb pdb:5E5A|rcsb pdb:5F99|rcsb pdb:5HQ2|rcsb pdb:5KGF|rcsb pdb:5MLU|rcsb pdb:5NL0|rcsb pdb:5O9G|rcsb pdb:5OMX|rcsb pdb:5ONG|rcsb pdb:5ONW|rcsb pdb:5OXV|rcsb pdb:5OY7|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5XBK|rcsb pdb:5XF6|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6ESF|rcsb pdb:6ESG|rcsb pdb:6ESH|rcsb pdb:6ESI|rcsb pdb:6FQ5|rcsb pdb:6FQ6|rcsb pdb:6I84|rcsb pdb:6IRO|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6JM9|rcsb pdb:6JMA|rcsb pdb:6KIU|rcsb pdb:6KIV|rcsb pdb:6KIW|rcsb pdb:6KIX|rcsb pdb:6KIZ|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6NE3|rcsb pdb:6NJ9|rcsb pdb:6NN6|rcsb pdb:6NOG|rcsb pdb:6NQA|rcsb pdb:6O22|rcsb pdb:6O96|rcsb pdb:6OM3|rcsb pdb:6PA7|rcsb pdb:6PWV|rcsb pdb:6PWW|rcsb pdb:6PWX|rcsb pdb:6R1T|rcsb pdb:6R1U|rcsb pdb:6R25|rcsb pdb:6RYR|rcsb pdb:6RYU|rcsb pdb:6S01|rcsb pdb:6T9L|rcsb pdb:6TDA|rcsb pdb:6UH5|rcsb pdb:6UXW|rcsb pdb:6VEN|rcsb pdb:6VYP|rcsb pdb:6W5I|rcsb pdb:6W5M|rcsb pdb:6W5N|rcsb pdb:6WKR|rcsb pdb:6WZ5|rcsb pdb:6WZ9|rcsb pdb:6X0N|rcsb pdb:6Z6P|rcsb pdb:7AT8|rcsb pdb:7K6P|rcsb pdb:7K6Q|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1F66|rcsb pdb:1KX3|rcsb pdb:1KX4|rcsb pdb:1KX5|rcsb pdb:1P34|rcsb pdb:1P3A|rcsb pdb:1P3B|rcsb pdb:1P3F|rcsb pdb:1P3G|rcsb pdb:1P3I|rcsb pdb:1P3K|rcsb pdb:1P3L|rcsb pdb:1P3M|rcsb pdb:1P3O|rcsb pdb:1P3P|rcsb pdb:1S32|rcsb pdb:1ZBB|rcsb pdb:1ZLA|rcsb pdb:2F8N|rcsb pdb:2FJ7|rcsb pdb:2HUE|rcsb pdb:2IO5|rcsb pdb:2L11|rcsb pdb:2L12|rcsb pdb:2NZD|rcsb pdb:3B6F|rcsb pdb:3B6G|rcsb pdb:3C1B|rcsb pdb:3C1C|rcsb pdb:3GV6|rcsb pdb:3KUY|rcsb pdb:3KWQ|rcsb pdb:4ZUX|rcsb pdb:3KXB|rcsb pdb:3LEL|rcsb pdb:3LJA|rcsb pdb:3LZ0|rcsb pdb:5BS7|rcsb pdb:3LZ1|rcsb pdb:3MGP|rcsb pdb:5BSA|rcsb pdb:3MGQ|rcsb pdb:3MGR|rcsb pdb:5CP6|rcsb pdb:3MGS|rcsb pdb:3MNN|rcsb pdb:3MVD|rcsb pdb:3O62|rcsb pdb:3REH|rcsb pdb:3REI|rcsb pdb:3REJ|rcsb pdb:3REK|rcsb pdb:3REL|rcsb pdb:3TU4|rcsb pdb:3UT9|rcsb pdb:3UTA|rcsb pdb:3UTB|rcsb pdb:4EO5|rcsb pdb:4J8U|rcsb pdb:4J8V|rcsb pdb:4J8W|rcsb pdb:4J8X|rcsb pdb:4KGC|rcsb pdb:4LD9|rcsb pdb:4QEO|rcsb pdb:4R8P|rcsb pdb:4WU8|rcsb pdb:4WU9|rcsb pdb:4XUJ|rcsb pdb:4XZQ|rcsb pdb:4YS3|rcsb pdb:4Z66|refseq:XP_018079657.1|refseq:XP_018096294.1|refseq:XP_018096295.1|refseq:XP_018096296.1|refseq:XP_018098036.1|refseq:XP_018118226.1|refseq:XP_018118227.1|dip:DIP-37430N wwpdb:6UXV(subset)|emdb:EMD-20933(subset) crc64:8E105921576FA213 - figure legend:Supplementary Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/04/08 2020/06/04 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:2TuVqWkeAnhHR4nrl0GNyUj1N3o8355 rigid:fYhznj+F24btXbO5hXNyvjNBJ6o false - - 1 2 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:Q12406 uniprotkb:P62799 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-302085|uniprotkb:P02304|uniprotkb:P02305|uniprotkb:Q6AZG5 psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:h4_xenla(display_long) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-25505822|emdb:EMD-20935|emdb:EMD-20934|wwpdb:6UXW|imex:IM-28044-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006352"(DNA-templated transcription, initiation)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR001951(Histone H4)|interpro:IPR004823("TATA box binding protein associated factor (TAF)")|interpro:IPR009072(Histone-fold)|interpro:IPR019809|interpro:IPR035425|rcsb pdb:1AOI|rcsb pdb:1KX3|rcsb pdb:1KX4|rcsb pdb:1KX5|rcsb pdb:1M18|rcsb pdb:1M19|rcsb pdb:1M1A|rcsb pdb:1P34|rcsb pdb:1P3A|rcsb pdb:1P3B|rcsb pdb:1P3F|rcsb pdb:1P3G|rcsb pdb:1P3I|rcsb pdb:1P3K|rcsb pdb:1P3L|rcsb pdb:1P3M|rcsb pdb:1P3O|rcsb pdb:1P3P|rcsb pdb:1S32|rcsb pdb:5BSA|rcsb pdb:5CP6|rcsb pdb:5DNM|rcsb pdb:5DNN|rcsb pdb:5E5A|rcsb pdb:5F99|rcsb pdb:5HQ2|rcsb pdb:5KGF|rcsb pdb:5MLU|rcsb pdb:5NL0|rcsb pdb:5O9G|rcsb pdb:5OMX|rcsb pdb:5ONG|rcsb pdb:5ONW|rcsb pdb:5OXV|rcsb pdb:5OY7|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5XF6|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6ESF|rcsb pdb:6ESG|rcsb pdb:6ESH|rcsb pdb:6ESI|rcsb pdb:6FQ5|rcsb pdb:6FQ6|rcsb pdb:1ZBB|rcsb pdb:1ZLA|rcsb pdb:2F8N|rcsb pdb:2FJ7|rcsb pdb:2HUE|rcsb pdb:2IO5|rcsb pdb:2NZD|rcsb pdb:3B6F|rcsb pdb:3B6G|rcsb pdb:3C1B|rcsb pdb:3C1C|rcsb pdb:3KUY|rcsb pdb:3KWQ|rcsb pdb:3KXB|rcsb pdb:3LEL|rcsb pdb:3LJA|rcsb pdb:3LZ0|rcsb pdb:3LZ1|rcsb pdb:3MGP|rcsb pdb:3MGQ|rcsb pdb:3MGR|rcsb pdb:3MGS|rcsb pdb:3MNN|rcsb pdb:3MVD|rcsb pdb:3O62|rcsb pdb:3REH|rcsb pdb:3REI|rcsb pdb:3REJ|rcsb pdb:3REK|rcsb pdb:3REL|rcsb pdb:3TU4|rcsb pdb:3UT9|rcsb pdb:3UTA|rcsb pdb:3UTB|rcsb pdb:4EO5|rcsb pdb:4J8U|rcsb pdb:4J8V|rcsb pdb:4J8W|rcsb pdb:4J8X|rcsb pdb:4KGC|rcsb pdb:4LD9|rcsb pdb:4R8P|rcsb pdb:4WU8|rcsb pdb:4WU9|rcsb pdb:4XUJ|rcsb pdb:4XZQ|rcsb pdb:4YS3|rcsb pdb:4Z66|rcsb pdb:4ZBJ|rcsb pdb:4ZUX|rcsb pdb:5BS7|rcsb pdb:6FQ8|rcsb pdb:6PWW|rcsb pdb:6FTX|rcsb pdb:6G0L|rcsb pdb:6GYT|rcsb pdb:6I84|rcsb pdb:6IRO|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6J99|rcsb pdb:6JM9|rcsb pdb:6JMA|rcsb pdb:6JYL|rcsb pdb:6K1P|rcsb pdb:6KIU|rcsb pdb:6KIV|rcsb pdb:6KIW|rcsb pdb:6KIX|rcsb pdb:6KIZ|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6LTJ|rcsb pdb:6NE3|rcsb pdb:6NJ9|rcsb pdb:6NN6|rcsb pdb:6NOG|rcsb pdb:6NQA|rcsb pdb:6NZO|rcsb pdb:6O22|rcsb pdb:6O96|rcsb pdb:6OM3|rcsb pdb:6PA7|rcsb pdb:6PWV|refseq:NP_001087926.1|rcsb pdb:6W5M|rcsb pdb:6W5N|rcsb pdb:6WKR|rcsb pdb:6WZ5|rcsb pdb:6WZ9|rcsb pdb:6X0N|rcsb pdb:6ZHX|rcsb pdb:6ZHY|rcsb pdb:7AT8|rcsb pdb:7CRO|rcsb pdb:7CRP|rcsb pdb:7CRQ|rcsb pdb:7CRR|rcsb pdb:7E8I|rcsb pdb:7K6P|rcsb pdb:7K6Q|rcsb pdb:7KTQ|rcsb pdb:6PWX|rcsb pdb:6PX1|rcsb pdb:6PX3|rcsb pdb:6R1T|rcsb pdb:6R1U|rcsb pdb:6R25|rcsb pdb:6RYR|rcsb pdb:6RYU|rcsb pdb:6S01|rcsb pdb:6T9L|rcsb pdb:6TDA|rcsb pdb:6TEM|rcsb pdb:6UGM|rcsb pdb:6UH5|rcsb pdb:6UXW|rcsb pdb:6VEN|rcsb pdb:6VYP|rcsb pdb:6VZ4|rcsb pdb:6W5I|dip:DIP-37429N|refseq:XP_018095104.1|refseq:XP_018095605.1|refseq:XP_018095606.1|refseq:XP_018096302.1|refseq:XP_018097458.1|refseq:XP_018098137.1|refseq:XP_018118237.1|refseq:XP_018120359.1|refseq:XP_018120360.1 wwpdb:6UXV(subset)|emdb:EMD-20933(subset) crc64:8E105921576FA213 - figure legend:Supplementary Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/04/08 2020/06/04 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:LZSfhrpw0PcDREEoJ1UMkBvnUfA8355 rigid:fYhznj+F24btXbO5hXNyvjNBJ6o false - - 1 2 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:Q12406 uniprotkb:P53330 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-23637|uniprotkb:D6VV52|ensemblfungi:YGR275W psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:rt102_yeast(display_long)|uniprotkb:RTT102(gene name)|psi-mi:RTT102(display_short)|uniprotkb:G9378(orf name)|uniprotkb:YGR275W(locus name) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-25505822|emdb:EMD-20935|emdb:EMD-20934|wwpdb:6UXW|imex:IM-28044-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_011791.4|sgd:S000003507|dip:DIP-3864N|mint:P53330|ensemblfungi:YGR275W(gene)|ensemblfungi:YGR275W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0007059"(chromosome segregation)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|interpro:IPR018304 wwpdb:6UXV(subset)|emdb:EMD-20933(subset) crc64:8E105921576FA213 - figure legend:Supplementary Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/04/08 2020/06/04 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:/DVamY55v9Ty3kmHzpK9s+Wakpg559292 rigid:fYhznj+F24btXbO5hXNyvjNBJ6o false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:Q12406 uniprotkb:P53628 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-17564|uniprotkb:D6W1J8|ensemblfungi:YNR023W psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:snf12_yeast(display_long)|uniprotkb:SNF12(gene name)|psi-mi:SNF12(display_short)|uniprotkb:SWP73(gene name synonym)|uniprotkb:YNR023W(locus name)|uniprotkb:N3224(orf name)|uniprotkb:SWI/SNF complex component SWP73(gene name synonym) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-25505822|emdb:EMD-20935|emdb:EMD-20934|wwpdb:6UXW|imex:IM-28044-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_014420.1|sgd:S000005306|ensemblfungi:YNR023W(gene)|ensemblfungi:YNR023W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|interpro:IPR036885|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|dip:DIP-2443N|mint:P53628 wwpdb:6UXV(subset)|emdb:EMD-20933(subset) crc64:8E105921576FA213 crc64:CD6E61EEEE85098C figure legend:Supplementary Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/04/08 2020/06/04 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:ZlOLOqBhD/vTk/ElJEQCUqB3QmA559292 rigid:fYhznj+F24btXbO5hXNyvjNBJ6o false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:Q12406 uniprotkb:P22082 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-17526|uniprotkb:D6W2Y8|ensemblfungi:YOR290C psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:snf2_yeast(display_long)|uniprotkb:SNF2(gene name)|psi-mi:SNF2(display_short)|uniprotkb:GAM1(gene name synonym)|uniprotkb:SWI2(gene name synonym)|uniprotkb:RIC1(gene name synonym)|uniprotkb:TYE3(gene name synonym)|uniprotkb:YOR290C(locus name)|uniprotkb:ATP-dependent helicase SNF2(gene name synonym)|uniprotkb:SWI/SNF complex component SNF2(gene name synonym)|uniprotkb:Regulatory protein SWI2(gene name synonym)|uniprotkb:Regulatory protein GAM1(gene name synonym)|uniprotkb:Transcription factor TYE3(gene name synonym) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-25505822|emdb:EMD-20935|emdb:EMD-20934|wwpdb:6UXW|imex:IM-28044-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_014933.3|sgd:S000005816|ensemblfungi:YOR290C(gene)|ensemblfungi:YOR290C_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016787"(hydrolase activity)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0035973"(aggrephagy)|go:"GO:0042148"(strand invasion)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0070615"|go:"GO:1900189"(positive regulation of cell adhesion involved in single-species biofilm formation)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR000330(SNF2-related)|interpro:IPR001487(Bromodomain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014012(Helicase/SANT-associated, DNA binding)|interpro:IPR014978(QLQ)|interpro:IPR017956|interpro:IPR018359|interpro:IPR027417|interpro:IPR029295|interpro:IPR036427|interpro:IPR038718|rcsb pdb:4I6M|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|dip:DIP-1150N|mint:P22082 wwpdb:6UXV(subset)|emdb:EMD-20933(subset) crc64:8E105921576FA213 crc64:84B8BC595C8F3E6D figure legend:Supplementary Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/04/08 2020/06/04 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:ci+ofV+hVtoh5xvcwV+wLmObJaE559292 rigid:fYhznj+F24btXbO5hXNyvjNBJ6o false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:Q12406 uniprotkb:P18480 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-17546|ensemblfungi:YBR289W|uniprotkb:D6VQT4 psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:snf5_yeast(display_long)|uniprotkb:SNF5(gene name)|psi-mi:SNF5(display_short)|uniprotkb:SWI10(gene name synonym)|uniprotkb:TYE4(gene name synonym)|uniprotkb:YBR2036(orf name)|uniprotkb:YBR289W(locus name)|uniprotkb:SWI/SNF complex subunit SNF5(gene name synonym)|uniprotkb:Transcription regulatory protein SNF5(gene name synonym)|uniprotkb:Transcription factor TYE4(gene name synonym) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-25505822|emdb:EMD-20935|emdb:EMD-20934|wwpdb:6UXW|imex:IM-28044-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 ensemblfungi:YBR289W(gene)|ensemblfungi:YBR289W_mRNA(transcript)|go:"GO:0000228"(nuclear chromosome)|go:"GO:0000436"(carbon catabolite activation of transcription from RNA polymerase II promoter)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR006939(SNF5/SMARCB1/INI1)|rcsb pdb:6L9J|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|sgd:S000000493|refseq:NP_009848.4|dip:DIP-2364N|mint:P18480 wwpdb:6UXV(subset)|emdb:EMD-20933(subset) crc64:8E105921576FA213 crc64:F6D31A57E6D6DA94 figure legend:Supplementary Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/04/08 2020/06/04 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:junuY0hqpGZ0JpVKX0jFf938OKE559292 rigid:fYhznj+F24btXbO5hXNyvjNBJ6o false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:Q12406 uniprotkb:P18888 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-17550|uniprotkb:D3DKU3|ensemblfungi:YHL025W psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:snf6_yeast(display_long)|uniprotkb:SNF6(gene name)|psi-mi:SNF6(display_short)|uniprotkb:YHL025W(locus name)|uniprotkb:SWI/SNF complex component SNF6(gene name synonym) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-25505822|emdb:EMD-20935|emdb:EMD-20934|wwpdb:6UXW|imex:IM-28044-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 go:"GO:0005829"(cytosol)|refseq:NP_011838.1|sgd:S000001017|go:"GO:0006338"(chromatin remodeling)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|go:"GO:0006289"(nucleotide-excision repair)|ensemblfungi:YHL025W(gene)|ensemblfungi:YHL025W_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|dip:DIP-1226N|mint:P18888 wwpdb:6UXV(subset)|emdb:EMD-20933(subset) crc64:8E105921576FA213 crc64:ED9EA9F313F9079F figure legend:Supplementary Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/04/08 2020/06/04 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:OjRVJEikcmyHBr/qDYYwQ1TgP1c559292 rigid:fYhznj+F24btXbO5hXNyvjNBJ6o false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:Q12406 uniprotkb:P09547 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-18617|ensemblfungi:YPL016W|uniprotkb:D6W3Z6 psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:swi1_yeast(display_long)|uniprotkb:SWI1(gene name)|psi-mi:SWI1(display_short)|uniprotkb:ADR6(gene name synonym)|uniprotkb:GAM3(gene name synonym)|uniprotkb:Regulatory protein GAM3(gene name synonym)|uniprotkb:SWI/SNF complex subunit SWI1(gene name synonym)|uniprotkb:Transcription regulatory protein ADR6(gene name synonym)|uniprotkb:Transcription regulatory protein SWI1(gene name synonym)|uniprotkb:LPA1(orf name)|uniprotkb:YPL016W(locus name) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-25505822|emdb:EMD-20935|emdb:EMD-20934|wwpdb:6UXW|imex:IM-28044-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 ensemblfungi:YPL016W_mRNA(transcript)|go:"GO:0000436"(carbon catabolite activation of transcription from RNA polymerase II promoter)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0005634"(nucleus)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|interpro:IPR001606(AT-rich interaction region)|interpro:IPR036431|rcsb pdb:1KKX|rcsb pdb:1KN5|rcsb pdb:2LI6|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|ensemblfungi:YPL016W(gene)|reactome:R-SCE-3214815|reactome:R-SCE-3214842|refseq:NP_015309.1|sgd:S000005937|dip:DIP-1032N|mint:P09547 wwpdb:6UXV(subset)|emdb:EMD-20933(subset) crc64:8E105921576FA213 crc64:F442D5A82013CDBD figure legend:Supplementary Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/04/08 2020/06/04 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:vETUV/S2ioTY1w4gJygXz5FG1qg559292 rigid:fYhznj+F24btXbO5hXNyvjNBJ6o false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:Q12406 uniprotkb:P32591 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-18622|ensemblfungi:YJL176C|uniprotkb:D6VW13 psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:swi3_yeast(display_long)|uniprotkb:SWI3(gene name)|psi-mi:SWI3(display_short)|uniprotkb:TYE2(gene name synonym)|uniprotkb:J0495(orf name)|uniprotkb:YJL176C(locus name)|uniprotkb:Transcription regulatory protein SWI3(gene name synonym)|uniprotkb:Transcription factor TYE2(gene name synonym) psi-mi:"MI:2339"(electron microscopy 3D single particle reconstruction) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-25505822|emdb:EMD-20935|emdb:EMD-20934|wwpdb:6UXW|imex:IM-28044-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 ensemblfungi:YJL176C(gene)|go:"GO:0000436"(carbon catabolite activation of transcription from RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0042393"(histone binding)|go:"GO:0043044"|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017884|interpro:IPR017930|interpro:IPR032451|interpro:IPR036388|rcsb pdb:2FQ3|rcsb pdb:6L9J|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|ensemblfungi:YJL176C_mRNA(transcript)|refseq:NP_012359.1|sgd:S000003712|dip:DIP-2471N|mint:P32591 wwpdb:6UXV(subset)|emdb:EMD-20933(subset) crc64:8E105921576FA213 crc64:DBA2E2022F15F9A6 figure legend:Supplementary Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/04/08 2020/06/04 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:nS1Z019Zv1HTDCHajHw2lvqLt14559292 rigid:fYhznj+F24btXbO5hXNyvjNBJ6o false - - 1 4 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:P22082 uniprotkb:P53330 intact:EBI-17526|uniprotkb:D6W2Y8|ensemblfungi:YOR290C intact:EBI-23637|uniprotkb:D6VV52|ensemblfungi:YGR275W psi-mi:snf2_yeast(display_long)|uniprotkb:SNF2(gene name)|psi-mi:SNF2(display_short)|uniprotkb:GAM1(gene name synonym)|uniprotkb:SWI2(gene name synonym)|uniprotkb:RIC1(gene name synonym)|uniprotkb:TYE3(gene name synonym)|uniprotkb:YOR290C(locus name)|uniprotkb:ATP-dependent helicase SNF2(gene name synonym)|uniprotkb:SWI/SNF complex component SNF2(gene name synonym)|uniprotkb:Regulatory protein SWI2(gene name synonym)|uniprotkb:Regulatory protein GAM1(gene name synonym)|uniprotkb:Transcription factor TYE3(gene name synonym) psi-mi:rt102_yeast(display_long)|uniprotkb:RTT102(gene name)|psi-mi:RTT102(display_short)|uniprotkb:G9378(orf name)|uniprotkb:YGR275W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0465"(DIP) intact:EBI-25505858|imex:IM-28044-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014933.3|sgd:S000005816|ensemblfungi:YOR290C(gene)|ensemblfungi:YOR290C_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016787"(hydrolase activity)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0035973"(aggrephagy)|go:"GO:0042148"(strand invasion)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0070615"|go:"GO:1900189"(positive regulation of cell adhesion involved in single-species biofilm formation)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR000330(SNF2-related)|interpro:IPR001487(Bromodomain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014012(Helicase/SANT-associated, DNA binding)|interpro:IPR014978(QLQ)|interpro:IPR017956|interpro:IPR018359|interpro:IPR027417|interpro:IPR029295|interpro:IPR036427|interpro:IPR038718|rcsb pdb:4I6M|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|dip:DIP-1150N|mint:P22082 refseq:NP_011791.4|sgd:S000003507|dip:DIP-3864N|mint:P53330|ensemblfungi:YGR275W(gene)|ensemblfungi:YGR275W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0007059"(chromosome segregation)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|interpro:IPR018304 - crc64:84B8BC595C8F3E6D - figure legend:ExtFig 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2020/04/08 2020/04/08 rogid:ci+ofV+hVtoh5xvcwV+wLmObJaE559292 rogid:/DVamY55v9Ty3kmHzpK9s+Wakpg559292 rigid:Uj75unAlGOySMMOnX9wngJpriM0 false tandem tag:c-c - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P22082 uniprotkb:Q05123 intact:EBI-17526|uniprotkb:D6W2Y8|ensemblfungi:YOR290C intact:EBI-2972|uniprotkb:D6VZK8|ensemblfungi:YMR033W psi-mi:snf2_yeast(display_long)|uniprotkb:SNF2(gene name)|psi-mi:SNF2(display_short)|uniprotkb:GAM1(gene name synonym)|uniprotkb:SWI2(gene name synonym)|uniprotkb:RIC1(gene name synonym)|uniprotkb:TYE3(gene name synonym)|uniprotkb:YOR290C(locus name)|uniprotkb:ATP-dependent helicase SNF2(gene name synonym)|uniprotkb:SWI/SNF complex component SNF2(gene name synonym)|uniprotkb:Regulatory protein SWI2(gene name synonym)|uniprotkb:Regulatory protein GAM1(gene name synonym)|uniprotkb:Transcription factor TYE3(gene name synonym) psi-mi:arp9_yeast(display_long)|uniprotkb:ARP9(gene name)|psi-mi:ARP9(display_short)|uniprotkb:SWP59(gene name synonym)|uniprotkb:YMR033W(locus name)|uniprotkb:YM9973.07(orf name)|uniprotkb:Chromatin structure-remodeling complex protein ARP9(gene name synonym)|uniprotkb:SWI/SNF complex component ARP9(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0465"(DIP) intact:EBI-25505858|imex:IM-28044-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014933.3|sgd:S000005816|ensemblfungi:YOR290C(gene)|ensemblfungi:YOR290C_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016787"(hydrolase activity)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0035973"(aggrephagy)|go:"GO:0042148"(strand invasion)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0070615"|go:"GO:1900189"(positive regulation of cell adhesion involved in single-species biofilm formation)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR000330(SNF2-related)|interpro:IPR001487(Bromodomain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014012(Helicase/SANT-associated, DNA binding)|interpro:IPR014978(QLQ)|interpro:IPR017956|interpro:IPR018359|interpro:IPR027417|interpro:IPR029295|interpro:IPR036427|interpro:IPR038718|rcsb pdb:4I6M|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|dip:DIP-1150N|mint:P22082 refseq:NP_013747.1|sgd:S000004636|dip:DIP-6709N|mint:Q05123|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858|ensemblfungi:YMR033W(gene)|ensemblfungi:YMR033W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016586"(RSC-type complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4 - crc64:84B8BC595C8F3E6D crc64:EE1AB154A906420E figure legend:ExtFig 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2020/04/08 2020/04/08 rogid:ci+ofV+hVtoh5xvcwV+wLmObJaE559292 rogid:bn+KSKckXTEdvwOpf5DiKsRy484559292 rigid:Uj75unAlGOySMMOnX9wngJpriM0 false tandem tag:c-c - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P22082 uniprotkb:Q12406 intact:EBI-17526|uniprotkb:D6W2Y8|ensemblfungi:YOR290C intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W psi-mi:snf2_yeast(display_long)|uniprotkb:SNF2(gene name)|psi-mi:SNF2(display_short)|uniprotkb:GAM1(gene name synonym)|uniprotkb:SWI2(gene name synonym)|uniprotkb:RIC1(gene name synonym)|uniprotkb:TYE3(gene name synonym)|uniprotkb:YOR290C(locus name)|uniprotkb:ATP-dependent helicase SNF2(gene name synonym)|uniprotkb:SWI/SNF complex component SNF2(gene name synonym)|uniprotkb:Regulatory protein SWI2(gene name synonym)|uniprotkb:Regulatory protein GAM1(gene name synonym)|uniprotkb:Transcription factor TYE3(gene name synonym) psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0465"(DIP) intact:EBI-25505858|imex:IM-28044-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014933.3|sgd:S000005816|ensemblfungi:YOR290C(gene)|ensemblfungi:YOR290C_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016787"(hydrolase activity)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0035973"(aggrephagy)|go:"GO:0042148"(strand invasion)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0070615"|go:"GO:1900189"(positive regulation of cell adhesion involved in single-species biofilm formation)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR000330(SNF2-related)|interpro:IPR001487(Bromodomain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014012(Helicase/SANT-associated, DNA binding)|interpro:IPR014978(QLQ)|interpro:IPR017956|interpro:IPR018359|interpro:IPR027417|interpro:IPR029295|interpro:IPR036427|interpro:IPR038718|rcsb pdb:4I6M|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|dip:DIP-1150N|mint:P22082 refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 - crc64:84B8BC595C8F3E6D crc64:8E105921576FA213 figure legend:ExtFig 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2020/04/08 2020/04/08 rogid:ci+ofV+hVtoh5xvcwV+wLmObJaE559292 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rigid:Uj75unAlGOySMMOnX9wngJpriM0 false tandem tag:c-c - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P22082 uniprotkb:P18888 intact:EBI-17526|uniprotkb:D6W2Y8|ensemblfungi:YOR290C intact:EBI-17550|uniprotkb:D3DKU3|ensemblfungi:YHL025W psi-mi:snf2_yeast(display_long)|uniprotkb:SNF2(gene name)|psi-mi:SNF2(display_short)|uniprotkb:GAM1(gene name synonym)|uniprotkb:SWI2(gene name synonym)|uniprotkb:RIC1(gene name synonym)|uniprotkb:TYE3(gene name synonym)|uniprotkb:YOR290C(locus name)|uniprotkb:ATP-dependent helicase SNF2(gene name synonym)|uniprotkb:SWI/SNF complex component SNF2(gene name synonym)|uniprotkb:Regulatory protein SWI2(gene name synonym)|uniprotkb:Regulatory protein GAM1(gene name synonym)|uniprotkb:Transcription factor TYE3(gene name synonym) psi-mi:snf6_yeast(display_long)|uniprotkb:SNF6(gene name)|psi-mi:SNF6(display_short)|uniprotkb:YHL025W(locus name)|uniprotkb:SWI/SNF complex component SNF6(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0465"(DIP) intact:EBI-25505858|imex:IM-28044-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014933.3|sgd:S000005816|ensemblfungi:YOR290C(gene)|ensemblfungi:YOR290C_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016787"(hydrolase activity)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0035973"(aggrephagy)|go:"GO:0042148"(strand invasion)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0070615"|go:"GO:1900189"(positive regulation of cell adhesion involved in single-species biofilm formation)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR000330(SNF2-related)|interpro:IPR001487(Bromodomain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014012(Helicase/SANT-associated, DNA binding)|interpro:IPR014978(QLQ)|interpro:IPR017956|interpro:IPR018359|interpro:IPR027417|interpro:IPR029295|interpro:IPR036427|interpro:IPR038718|rcsb pdb:4I6M|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|dip:DIP-1150N|mint:P22082 go:"GO:0005829"(cytosol)|refseq:NP_011838.1|sgd:S000001017|go:"GO:0006338"(chromatin remodeling)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|go:"GO:0006289"(nucleotide-excision repair)|ensemblfungi:YHL025W(gene)|ensemblfungi:YHL025W_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|dip:DIP-1226N|mint:P18888 - crc64:84B8BC595C8F3E6D crc64:ED9EA9F313F9079F figure legend:ExtFig 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2020/04/08 2020/04/08 rogid:ci+ofV+hVtoh5xvcwV+wLmObJaE559292 rogid:OjRVJEikcmyHBr/qDYYwQ1TgP1c559292 rigid:Uj75unAlGOySMMOnX9wngJpriM0 false tandem tag:c-c - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P22082 uniprotkb:P53628 intact:EBI-17526|uniprotkb:D6W2Y8|ensemblfungi:YOR290C intact:EBI-17564|uniprotkb:D6W1J8|ensemblfungi:YNR023W psi-mi:snf2_yeast(display_long)|uniprotkb:SNF2(gene name)|psi-mi:SNF2(display_short)|uniprotkb:GAM1(gene name synonym)|uniprotkb:SWI2(gene name synonym)|uniprotkb:RIC1(gene name synonym)|uniprotkb:TYE3(gene name synonym)|uniprotkb:YOR290C(locus name)|uniprotkb:ATP-dependent helicase SNF2(gene name synonym)|uniprotkb:SWI/SNF complex component SNF2(gene name synonym)|uniprotkb:Regulatory protein SWI2(gene name synonym)|uniprotkb:Regulatory protein GAM1(gene name synonym)|uniprotkb:Transcription factor TYE3(gene name synonym) psi-mi:snf12_yeast(display_long)|uniprotkb:SNF12(gene name)|psi-mi:SNF12(display_short)|uniprotkb:SWP73(gene name synonym)|uniprotkb:YNR023W(locus name)|uniprotkb:N3224(orf name)|uniprotkb:SWI/SNF complex component SWP73(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0465"(DIP) intact:EBI-25505858|imex:IM-28044-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014933.3|sgd:S000005816|ensemblfungi:YOR290C(gene)|ensemblfungi:YOR290C_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016787"(hydrolase activity)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0035973"(aggrephagy)|go:"GO:0042148"(strand invasion)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0070615"|go:"GO:1900189"(positive regulation of cell adhesion involved in single-species biofilm formation)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR000330(SNF2-related)|interpro:IPR001487(Bromodomain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014012(Helicase/SANT-associated, DNA binding)|interpro:IPR014978(QLQ)|interpro:IPR017956|interpro:IPR018359|interpro:IPR027417|interpro:IPR029295|interpro:IPR036427|interpro:IPR038718|rcsb pdb:4I6M|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|dip:DIP-1150N|mint:P22082 refseq:NP_014420.1|sgd:S000005306|ensemblfungi:YNR023W(gene)|ensemblfungi:YNR023W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|interpro:IPR036885|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|dip:DIP-2443N|mint:P53628 - crc64:84B8BC595C8F3E6D crc64:CD6E61EEEE85098C figure legend:ExtFig 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2020/04/08 2020/04/08 rogid:ci+ofV+hVtoh5xvcwV+wLmObJaE559292 rogid:ZlOLOqBhD/vTk/ElJEQCUqB3QmA559292 rigid:Uj75unAlGOySMMOnX9wngJpriM0 false tandem tag:c-c - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P22082 uniprotkb:P32591 intact:EBI-17526|uniprotkb:D6W2Y8|ensemblfungi:YOR290C intact:EBI-18622|ensemblfungi:YJL176C|uniprotkb:D6VW13 psi-mi:snf2_yeast(display_long)|uniprotkb:SNF2(gene name)|psi-mi:SNF2(display_short)|uniprotkb:GAM1(gene name synonym)|uniprotkb:SWI2(gene name synonym)|uniprotkb:RIC1(gene name synonym)|uniprotkb:TYE3(gene name synonym)|uniprotkb:YOR290C(locus name)|uniprotkb:ATP-dependent helicase SNF2(gene name synonym)|uniprotkb:SWI/SNF complex component SNF2(gene name synonym)|uniprotkb:Regulatory protein SWI2(gene name synonym)|uniprotkb:Regulatory protein GAM1(gene name synonym)|uniprotkb:Transcription factor TYE3(gene name synonym) psi-mi:swi3_yeast(display_long)|uniprotkb:SWI3(gene name)|psi-mi:SWI3(display_short)|uniprotkb:TYE2(gene name synonym)|uniprotkb:J0495(orf name)|uniprotkb:YJL176C(locus name)|uniprotkb:Transcription regulatory protein SWI3(gene name synonym)|uniprotkb:Transcription factor TYE2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0465"(DIP) intact:EBI-25505858|imex:IM-28044-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014933.3|sgd:S000005816|ensemblfungi:YOR290C(gene)|ensemblfungi:YOR290C_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016787"(hydrolase activity)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0035973"(aggrephagy)|go:"GO:0042148"(strand invasion)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0070615"|go:"GO:1900189"(positive regulation of cell adhesion involved in single-species biofilm formation)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR000330(SNF2-related)|interpro:IPR001487(Bromodomain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014012(Helicase/SANT-associated, DNA binding)|interpro:IPR014978(QLQ)|interpro:IPR017956|interpro:IPR018359|interpro:IPR027417|interpro:IPR029295|interpro:IPR036427|interpro:IPR038718|rcsb pdb:4I6M|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|dip:DIP-1150N|mint:P22082 ensemblfungi:YJL176C(gene)|go:"GO:0000436"(carbon catabolite activation of transcription from RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0042393"(histone binding)|go:"GO:0043044"|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017884|interpro:IPR017930|interpro:IPR032451|interpro:IPR036388|rcsb pdb:2FQ3|rcsb pdb:6L9J|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|ensemblfungi:YJL176C_mRNA(transcript)|refseq:NP_012359.1|sgd:S000003712|dip:DIP-2471N|mint:P32591 - crc64:84B8BC595C8F3E6D crc64:DBA2E2022F15F9A6 figure legend:ExtFig 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2020/04/08 2020/04/08 rogid:ci+ofV+hVtoh5xvcwV+wLmObJaE559292 rogid:nS1Z019Zv1HTDCHajHw2lvqLt14559292 rigid:Uj75unAlGOySMMOnX9wngJpriM0 false tandem tag:c-c - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P22082 uniprotkb:P18480 intact:EBI-17526|uniprotkb:D6W2Y8|ensemblfungi:YOR290C intact:EBI-17546|ensemblfungi:YBR289W|uniprotkb:D6VQT4 psi-mi:snf2_yeast(display_long)|uniprotkb:SNF2(gene name)|psi-mi:SNF2(display_short)|uniprotkb:GAM1(gene name synonym)|uniprotkb:SWI2(gene name synonym)|uniprotkb:RIC1(gene name synonym)|uniprotkb:TYE3(gene name synonym)|uniprotkb:YOR290C(locus name)|uniprotkb:ATP-dependent helicase SNF2(gene name synonym)|uniprotkb:SWI/SNF complex component SNF2(gene name synonym)|uniprotkb:Regulatory protein SWI2(gene name synonym)|uniprotkb:Regulatory protein GAM1(gene name synonym)|uniprotkb:Transcription factor TYE3(gene name synonym) psi-mi:snf5_yeast(display_long)|uniprotkb:SNF5(gene name)|psi-mi:SNF5(display_short)|uniprotkb:SWI10(gene name synonym)|uniprotkb:TYE4(gene name synonym)|uniprotkb:YBR2036(orf name)|uniprotkb:YBR289W(locus name)|uniprotkb:SWI/SNF complex subunit SNF5(gene name synonym)|uniprotkb:Transcription regulatory protein SNF5(gene name synonym)|uniprotkb:Transcription factor TYE4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0465"(DIP) intact:EBI-25505858|imex:IM-28044-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014933.3|sgd:S000005816|ensemblfungi:YOR290C(gene)|ensemblfungi:YOR290C_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016787"(hydrolase activity)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0035973"(aggrephagy)|go:"GO:0042148"(strand invasion)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0070615"|go:"GO:1900189"(positive regulation of cell adhesion involved in single-species biofilm formation)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR000330(SNF2-related)|interpro:IPR001487(Bromodomain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014012(Helicase/SANT-associated, DNA binding)|interpro:IPR014978(QLQ)|interpro:IPR017956|interpro:IPR018359|interpro:IPR027417|interpro:IPR029295|interpro:IPR036427|interpro:IPR038718|rcsb pdb:4I6M|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|dip:DIP-1150N|mint:P22082 ensemblfungi:YBR289W(gene)|ensemblfungi:YBR289W_mRNA(transcript)|go:"GO:0000228"(nuclear chromosome)|go:"GO:0000436"(carbon catabolite activation of transcription from RNA polymerase II promoter)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR006939(SNF5/SMARCB1/INI1)|rcsb pdb:6L9J|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|sgd:S000000493|refseq:NP_009848.4|dip:DIP-2364N|mint:P18480 - crc64:84B8BC595C8F3E6D crc64:F6D31A57E6D6DA94 figure legend:ExtFig 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2020/04/08 2020/04/08 rogid:ci+ofV+hVtoh5xvcwV+wLmObJaE559292 rogid:junuY0hqpGZ0JpVKX0jFf938OKE559292 rigid:Uj75unAlGOySMMOnX9wngJpriM0 false tandem tag:c-c - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P22082 uniprotkb:P09547 intact:EBI-17526|uniprotkb:D6W2Y8|ensemblfungi:YOR290C intact:EBI-18617|ensemblfungi:YPL016W|uniprotkb:D6W3Z6 psi-mi:snf2_yeast(display_long)|uniprotkb:SNF2(gene name)|psi-mi:SNF2(display_short)|uniprotkb:GAM1(gene name synonym)|uniprotkb:SWI2(gene name synonym)|uniprotkb:RIC1(gene name synonym)|uniprotkb:TYE3(gene name synonym)|uniprotkb:YOR290C(locus name)|uniprotkb:ATP-dependent helicase SNF2(gene name synonym)|uniprotkb:SWI/SNF complex component SNF2(gene name synonym)|uniprotkb:Regulatory protein SWI2(gene name synonym)|uniprotkb:Regulatory protein GAM1(gene name synonym)|uniprotkb:Transcription factor TYE3(gene name synonym) psi-mi:swi1_yeast(display_long)|uniprotkb:SWI1(gene name)|psi-mi:SWI1(display_short)|uniprotkb:ADR6(gene name synonym)|uniprotkb:GAM3(gene name synonym)|uniprotkb:Regulatory protein GAM3(gene name synonym)|uniprotkb:SWI/SNF complex subunit SWI1(gene name synonym)|uniprotkb:Transcription regulatory protein ADR6(gene name synonym)|uniprotkb:Transcription regulatory protein SWI1(gene name synonym)|uniprotkb:LPA1(orf name)|uniprotkb:YPL016W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Han et al. (2020) imex:IM-28044|pubmed:32188938 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0465"(DIP) intact:EBI-25505858|imex:IM-28044-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014933.3|sgd:S000005816|ensemblfungi:YOR290C(gene)|ensemblfungi:YOR290C_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016787"(hydrolase activity)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0035973"(aggrephagy)|go:"GO:0042148"(strand invasion)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0070615"|go:"GO:1900189"(positive regulation of cell adhesion involved in single-species biofilm formation)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR000330(SNF2-related)|interpro:IPR001487(Bromodomain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014012(Helicase/SANT-associated, DNA binding)|interpro:IPR014978(QLQ)|interpro:IPR017956|interpro:IPR018359|interpro:IPR027417|interpro:IPR029295|interpro:IPR036427|interpro:IPR038718|rcsb pdb:4I6M|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|dip:DIP-1150N|mint:P22082 ensemblfungi:YPL016W_mRNA(transcript)|go:"GO:0000436"(carbon catabolite activation of transcription from RNA polymerase II promoter)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0005634"(nucleus)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|interpro:IPR001606(AT-rich interaction region)|interpro:IPR036431|rcsb pdb:1KKX|rcsb pdb:1KN5|rcsb pdb:2LI6|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|ensemblfungi:YPL016W(gene)|reactome:R-SCE-3214815|reactome:R-SCE-3214842|refseq:NP_015309.1|sgd:S000005937|dip:DIP-1032N|mint:P09547 - crc64:84B8BC595C8F3E6D crc64:F442D5A82013CDBD figure legend:ExtFig 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2020/04/08 2020/04/08 rogid:ci+ofV+hVtoh5xvcwV+wLmObJaE559292 rogid:vETUV/S2ioTY1w4gJygXz5FG1qg559292 rigid:Uj75unAlGOySMMOnX9wngJpriM0 false tandem tag:c-c - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)