#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q9BXV9 uniprotkb:Q14657 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-1052105|uniprotkb:Q5HY39|uniprotkb:Q8IZ78|ensembl:ENSP00000349923 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:lage3_human(display_long)|uniprotkb:Protein ITBA2(gene name synonym)|uniprotkb:Protein ESO-3(gene name synonym)|uniprotkb:ITBA2(gene name synonym)|uniprotkb:LAGE3(gene name)|psi-mi:LAGE3(display_short)|uniprotkb:DXS9879E(gene name synonym)|uniprotkb:ESO3(gene name synonym)|uniprotkb:L antigen family member 3(gene name synonym) psi-mi:"MI:0114"(x-ray crystallography) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431337|pdbe:6gwj|imex:IM-27727-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_006005.2|ensembl:ENSG00000196976(gene)|ensembl:ENST00000357360(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0008033"(tRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070525"(tRNA threonylcarbamoyladenosine metabolic process)|interpro:IPR015419(Transcription factor Pcc1)|rcsb pdb:6GWJ|reactome:R-HSA-6782315 - - - figure legend:Fig. 5C and D, Fig. S14 and Table S5|3d-resolution:1.95A resolution|3d-r-factors:"R work: 0.186 R free: 0.217"|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/02/19 2020/02/19 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:i85i7GnA4k4+zsftYKYMk+xWAFM9606 rigid:RJ2gzT+luihe4cQUR+dtzsugGGY false binding-associated region:?-?|his tag:?-? binding-associated region:?-?|binding-associated region:?-? 1 1 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9BXV9 uniprotkb:Q9NPF4 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-1056510|uniprotkb:Q6IAC3|ensembl:ENSP00000206542 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:osgep_human(display_long)|uniprotkb:"t(6)A37 threonylcarbamoyladenosine biosynthesis protein OSGEP"(gene name synonym)|uniprotkb:OSGEP(gene name)|psi-mi:OSGEP(display_short)|uniprotkb:GCPL1(gene name synonym)|uniprotkb:O-sialoglycoprotein endopeptidase(gene name synonym)|uniprotkb:tRNA threonylcarbamoyladenosine biosynthesis protein OSGEP(gene name synonym)|uniprotkb:N6-L-threonylcarbamoyladenine synthase(gene name synonym) psi-mi:"MI:0114"(x-ray crystallography) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431337|pdbe:6gwj|imex:IM-27727-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_060277.1|ensembl:ENSG00000092094(gene)|ensembl:ENST00000206542(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0016607"(nuclear speck)|go:"GO:0046872"(metal ion binding)|go:"GO:0061711"("N(6)-L-threonylcarbamoyladenine synthase activity")|interpro:IPR000905(Peptidase M22, glycoprotease)|interpro:IPR017860|interpro:IPR017861|interpro:IPR034680|interpro:IPR043129|mint:Q9NPF4|rcsb pdb:6GWJ|reactome:R-HSA-6782315 - - - figure legend:Fig. 5C and D, Fig. S14 and Table S5|3d-resolution:1.95A resolution|3d-r-factors:"R work: 0.186 R free: 0.217"|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/02/19 2020/02/19 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:gdWaUekKJ7WFXfPlaleW9Dpmsi89606 rigid:RJ2gzT+luihe4cQUR+dtzsugGGY false binding-associated region:?-?|his tag:?-? binding-associated region:?-? 1 1 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9BXV9 uniprotkb:Q14657 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-1052105|uniprotkb:Q5HY39|uniprotkb:Q8IZ78|ensembl:ENSP00000349923 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:lage3_human(display_long)|uniprotkb:Protein ITBA2(gene name synonym)|uniprotkb:Protein ESO-3(gene name synonym)|uniprotkb:ITBA2(gene name synonym)|uniprotkb:LAGE3(gene name)|psi-mi:LAGE3(display_short)|uniprotkb:DXS9879E(gene name synonym)|uniprotkb:ESO3(gene name synonym)|uniprotkb:L antigen family member 3(gene name synonym) psi-mi:"MI:0826"(x ray scattering) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431357|imex:IM-27727-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_006005.2|ensembl:ENSG00000196976(gene)|ensembl:ENST00000357360(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0008033"(tRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070525"(tRNA threonylcarbamoyladenosine metabolic process)|interpro:IPR015419(Transcription factor Pcc1)|rcsb pdb:6GWJ|reactome:R-HSA-6782315 - - - figure legend:Fig. 5A and B, Fig. S6B and D and Table S4|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/02/19 2020/02/19 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:i85i7GnA4k4+zsftYKYMk+xWAFM9606 rigid:RJ2gzT+luihe4cQUR+dtzsugGGY false his tag:?-? - 1 1 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9BXV9 uniprotkb:Q9NPF4 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-1056510|uniprotkb:Q6IAC3|ensembl:ENSP00000206542 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:osgep_human(display_long)|uniprotkb:"t(6)A37 threonylcarbamoyladenosine biosynthesis protein OSGEP"(gene name synonym)|uniprotkb:OSGEP(gene name)|psi-mi:OSGEP(display_short)|uniprotkb:GCPL1(gene name synonym)|uniprotkb:O-sialoglycoprotein endopeptidase(gene name synonym)|uniprotkb:tRNA threonylcarbamoyladenosine biosynthesis protein OSGEP(gene name synonym)|uniprotkb:N6-L-threonylcarbamoyladenine synthase(gene name synonym) psi-mi:"MI:0826"(x ray scattering) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431357|imex:IM-27727-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_060277.1|ensembl:ENSG00000092094(gene)|ensembl:ENST00000206542(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0016607"(nuclear speck)|go:"GO:0046872"(metal ion binding)|go:"GO:0061711"("N(6)-L-threonylcarbamoyladenine synthase activity")|interpro:IPR000905(Peptidase M22, glycoprotease)|interpro:IPR017860|interpro:IPR017861|interpro:IPR034680|interpro:IPR043129|mint:Q9NPF4|rcsb pdb:6GWJ|reactome:R-HSA-6782315 - - - figure legend:Fig. 5A and B, Fig. S6B and D and Table S4|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/02/19 2020/02/19 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:gdWaUekKJ7WFXfPlaleW9Dpmsi89606 rigid:RJ2gzT+luihe4cQUR+dtzsugGGY false his tag:?-? - 1 1 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9BXV9 uniprotkb:Q14657 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-1052105|uniprotkb:Q5HY39|uniprotkb:Q8IZ78|ensembl:ENSP00000349923 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:lage3_human(display_long)|uniprotkb:Protein ITBA2(gene name synonym)|uniprotkb:Protein ESO-3(gene name synonym)|uniprotkb:ITBA2(gene name synonym)|uniprotkb:LAGE3(gene name)|psi-mi:LAGE3(display_short)|uniprotkb:DXS9879E(gene name synonym)|uniprotkb:ESO3(gene name synonym)|uniprotkb:L antigen family member 3(gene name synonym) psi-mi:"MI:0826"(x ray scattering) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-25431365|imex:IM-27727-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_006005.2|ensembl:ENSG00000196976(gene)|ensembl:ENST00000357360(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0008033"(tRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070525"(tRNA threonylcarbamoyladenosine metabolic process)|interpro:IPR015419(Transcription factor Pcc1)|rcsb pdb:6GWJ|reactome:R-HSA-6782315 - - - figure legend:Fig. 5A and B, Fig. S6B and D and Table S4|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/02/19 2020/02/21 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:i85i7GnA4k4+zsftYKYMk+xWAFM9606 rigid:3y3ZESJngBLKvBIPRuF9StT+t24 false his tag:?-? - 1 1 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9BXV9 uniprotkb:Q14657 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-1052105|uniprotkb:Q5HY39|uniprotkb:Q8IZ78|ensembl:ENSP00000349923 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:lage3_human(display_long)|uniprotkb:Protein ITBA2(gene name synonym)|uniprotkb:Protein ESO-3(gene name synonym)|uniprotkb:ITBA2(gene name synonym)|uniprotkb:LAGE3(gene name)|psi-mi:LAGE3(display_short)|uniprotkb:DXS9879E(gene name synonym)|uniprotkb:ESO3(gene name synonym)|uniprotkb:L antigen family member 3(gene name synonym) psi-mi:"MI:0071"(molecular sieving) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431377|imex:IM-27727-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_006005.2|ensembl:ENSG00000196976(gene)|ensembl:ENST00000357360(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0008033"(tRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070525"(tRNA threonylcarbamoyladenosine metabolic process)|interpro:IPR015419(Transcription factor Pcc1)|rcsb pdb:6GWJ|reactome:R-HSA-6782315 - - - figure legend:Table S9 and Fig. S13B|comment:C3 fraction|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/02/19 2020/02/20 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:i85i7GnA4k4+zsftYKYMk+xWAFM9606 rigid:jhJfupTkZ25LEydRTwnDAv9BEzQ false his tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9BXV9 uniprotkb:Q9NPF4 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-1056510|uniprotkb:Q6IAC3|ensembl:ENSP00000206542 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:osgep_human(display_long)|uniprotkb:"t(6)A37 threonylcarbamoyladenosine biosynthesis protein OSGEP"(gene name synonym)|uniprotkb:OSGEP(gene name)|psi-mi:OSGEP(display_short)|uniprotkb:GCPL1(gene name synonym)|uniprotkb:O-sialoglycoprotein endopeptidase(gene name synonym)|uniprotkb:tRNA threonylcarbamoyladenosine biosynthesis protein OSGEP(gene name synonym)|uniprotkb:N6-L-threonylcarbamoyladenine synthase(gene name synonym) psi-mi:"MI:0071"(molecular sieving) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431377|imex:IM-27727-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_060277.1|ensembl:ENSG00000092094(gene)|ensembl:ENST00000206542(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0016607"(nuclear speck)|go:"GO:0046872"(metal ion binding)|go:"GO:0061711"("N(6)-L-threonylcarbamoyladenine synthase activity")|interpro:IPR000905(Peptidase M22, glycoprotease)|interpro:IPR017860|interpro:IPR017861|interpro:IPR034680|interpro:IPR043129|mint:Q9NPF4|rcsb pdb:6GWJ|reactome:R-HSA-6782315 - - - figure legend:Table S9 and Fig. S13B|comment:C3 fraction|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/02/19 2020/02/20 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:gdWaUekKJ7WFXfPlaleW9Dpmsi89606 rigid:jhJfupTkZ25LEydRTwnDAv9BEzQ false his tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9BXV9 uniprotkb:Q96S44 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-739588|uniprotkb:Q3T977|uniprotkb:Q5JZ01|uniprotkb:Q6NZ60|uniprotkb:Q96FM7|uniprotkb:Q9NQE6|uniprotkb:B3KU44|ensembl:ENSP00000361186 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:prpk_human(display_long)|uniprotkb:TP53-regulating kinase(gene name synonym)|uniprotkb:TP53RK(gene name)|psi-mi:TP53RK(display_short)|uniprotkb:C20orf64(gene name synonym)|uniprotkb:PRPK(gene name synonym)|uniprotkb:p53-related protein kinase(gene name synonym)|uniprotkb:Nori-2(gene name synonym)|uniprotkb:Atypical serine/threonine protein kinase TP53RK(gene name synonym) psi-mi:"MI:0071"(molecular sieving) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431377|imex:IM-27727-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_291028.3|ensembl:ENSG00000172315(gene)|ensembl:ENST00000372114(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0002039"(p53 binding)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016787"(hydrolase activity)|go:"GO:0070525"(tRNA threonylcarbamoyladenosine metabolic process)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1901796"(regulation of signal transduction by p53 class mediator)|interpro:IPR000719(Protein kinase, core)|interpro:IPR008266(Tyrosine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR022495|rcsb pdb:6WQX|reactome:R-HSA-6782315|reactome:R-HSA-6804756 - - - figure legend:Table S9 and Fig. S13B|comment:C3 fraction|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/02/19 2020/02/20 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:sgh5tCNgPpL4E4SmEQhLz6qci109606 rigid:jhJfupTkZ25LEydRTwnDAv9BEzQ false his tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9BXV9 uniprotkb:Q9Y3C4 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-750123|uniprotkb:D6W5H6|uniprotkb:Q8IWR6|uniprotkb:Q8IWR7|uniprotkb:Q9H3K4|ensembl:ENSP00000272424 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:tprkb_human(display_long)|uniprotkb:PRPK-binding protein(gene name synonym)|uniprotkb:TPRKB(gene name)|psi-mi:TPRKB(display_short)|uniprotkb:TP53RK-binding protein(gene name synonym)|uniprotkb:CGI-121(orf name)|uniprotkb:My019(orf name) psi-mi:"MI:0071"(molecular sieving) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431377|imex:IM-27727-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:XP_011531179.1|refseq:XP_011531180.1|refseq:NP_057142.1|refseq:XP_006712090.1|refseq:NP_001317315.1|refseq:NP_001317316.1|refseq:NP_001317317.1|refseq:NP_001317318.1|refseq:NP_001317320.1|refseq:NP_001317321.1|refseq:XP_016859721.1|refseq:XP_016859722.1|refseq:XP_016859723.1|ensembl:ENSG00000144034(gene)|ensembl:ENST00000272424(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0000722"(telomere maintenance via recombination)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0019901"(protein kinase binding)|interpro:IPR013926(Kinase binding protein CGI-121)|interpro:IPR036504|rcsb pdb:3ENP|rcsb pdb:6WQX|reactome:R-HSA-6782315 - - - figure legend:Table S9 and Fig. S13B|comment:C3 fraction|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/02/19 2020/02/20 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:hsboCuMYBT3FzLom262TDGm5lOQ9606 rigid:jhJfupTkZ25LEydRTwnDAv9BEzQ false his tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q14657 uniprotkb:Q9BXV9 intact:EBI-1052105|uniprotkb:Q5HY39|uniprotkb:Q8IZ78|ensembl:ENSP00000349923 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 psi-mi:lage3_human(display_long)|uniprotkb:Protein ITBA2(gene name synonym)|uniprotkb:Protein ESO-3(gene name synonym)|uniprotkb:ITBA2(gene name synonym)|uniprotkb:LAGE3(gene name)|psi-mi:LAGE3(display_short)|uniprotkb:DXS9879E(gene name synonym)|uniprotkb:ESO3(gene name synonym)|uniprotkb:L antigen family member 3(gene name synonym) psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:"MI:0071"(molecular sieving) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-25431425|imex:IM-27727-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006005.2|ensembl:ENSG00000196976(gene)|ensembl:ENST00000357360(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0008033"(tRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070525"(tRNA threonylcarbamoyladenosine metabolic process)|interpro:IPR015419(Transcription factor Pcc1)|rcsb pdb:6GWJ|reactome:R-HSA-6782315 ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 - - - figure legend:Fig. S12|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/02/19 2020/02/20 rogid:i85i7GnA4k4+zsftYKYMk+xWAFM9606 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rigid:3y3ZESJngBLKvBIPRuF9StT+t24 false - his tag:?-? - - psi-mi:"MI:0815"(confirmation by molecular weight) psi-mi:"MI:0815"(confirmation by molecular weight) uniprotkb:Q9BXV9 uniprotkb:Q14657 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-1052105|uniprotkb:Q5HY39|uniprotkb:Q8IZ78|ensembl:ENSP00000349923 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:lage3_human(display_long)|uniprotkb:Protein ITBA2(gene name synonym)|uniprotkb:Protein ESO-3(gene name synonym)|uniprotkb:ITBA2(gene name synonym)|uniprotkb:LAGE3(gene name)|psi-mi:LAGE3(display_short)|uniprotkb:DXS9879E(gene name synonym)|uniprotkb:ESO3(gene name synonym)|uniprotkb:L antigen family member 3(gene name synonym) psi-mi:"MI:0071"(molecular sieving) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431648|imex:IM-27727-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_006005.2|ensembl:ENSG00000196976(gene)|ensembl:ENST00000357360(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0008033"(tRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070525"(tRNA threonylcarbamoyladenosine metabolic process)|interpro:IPR015419(Transcription factor Pcc1)|rcsb pdb:6GWJ|reactome:R-HSA-6782315 - - - figure legend:Fig. S13B|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/02/19 2020/02/20 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:i85i7GnA4k4+zsftYKYMk+xWAFM9606 rigid:RJ2gzT+luihe4cQUR+dtzsugGGY false his tag:?-? - - - psi-mi:"MI:0815"(confirmation by molecular weight) psi-mi:"MI:0815"(confirmation by molecular weight) uniprotkb:Q9BXV9 uniprotkb:Q9NPF4 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-1056510|uniprotkb:Q6IAC3|ensembl:ENSP00000206542 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:osgep_human(display_long)|uniprotkb:"t(6)A37 threonylcarbamoyladenosine biosynthesis protein OSGEP"(gene name synonym)|uniprotkb:OSGEP(gene name)|psi-mi:OSGEP(display_short)|uniprotkb:GCPL1(gene name synonym)|uniprotkb:O-sialoglycoprotein endopeptidase(gene name synonym)|uniprotkb:tRNA threonylcarbamoyladenosine biosynthesis protein OSGEP(gene name synonym)|uniprotkb:N6-L-threonylcarbamoyladenine synthase(gene name synonym) psi-mi:"MI:0071"(molecular sieving) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431648|imex:IM-27727-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_060277.1|ensembl:ENSG00000092094(gene)|ensembl:ENST00000206542(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0016607"(nuclear speck)|go:"GO:0046872"(metal ion binding)|go:"GO:0061711"("N(6)-L-threonylcarbamoyladenine synthase activity")|interpro:IPR000905(Peptidase M22, glycoprotease)|interpro:IPR017860|interpro:IPR017861|interpro:IPR034680|interpro:IPR043129|mint:Q9NPF4|rcsb pdb:6GWJ|reactome:R-HSA-6782315 - - - figure legend:Fig. S13B|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/02/19 2020/02/20 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:gdWaUekKJ7WFXfPlaleW9Dpmsi89606 rigid:RJ2gzT+luihe4cQUR+dtzsugGGY false his tag:?-? - - - psi-mi:"MI:0815"(confirmation by molecular weight) psi-mi:"MI:0815"(confirmation by molecular weight) uniprotkb:Q14657 uniprotkb:Q9BXV9 intact:EBI-1052105|uniprotkb:Q5HY39|uniprotkb:Q8IZ78|ensembl:ENSP00000349923 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 psi-mi:lage3_human(display_long)|uniprotkb:Protein ITBA2(gene name synonym)|uniprotkb:Protein ESO-3(gene name synonym)|uniprotkb:ITBA2(gene name synonym)|uniprotkb:LAGE3(gene name)|psi-mi:LAGE3(display_short)|uniprotkb:DXS9879E(gene name synonym)|uniprotkb:ESO3(gene name synonym)|uniprotkb:L antigen family member 3(gene name synonym) psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:"MI:0077"(nuclear magnetic resonance) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-25431679|imex:IM-27727-12 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006005.2|ensembl:ENSG00000196976(gene)|ensembl:ENST00000357360(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0008033"(tRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070525"(tRNA threonylcarbamoyladenosine metabolic process)|interpro:IPR015419(Transcription factor Pcc1)|rcsb pdb:6GWJ|reactome:R-HSA-6782315 ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 - - - figure legend:Fig. S6A|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/02/19 2020/02/20 rogid:i85i7GnA4k4+zsftYKYMk+xWAFM9606 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rigid:3y3ZESJngBLKvBIPRuF9StT+t24 false his tag:?-? his tag:?-?|15n label:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9BXV9 uniprotkb:Q96S44 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-739588|uniprotkb:Q3T977|uniprotkb:Q5JZ01|uniprotkb:Q6NZ60|uniprotkb:Q96FM7|uniprotkb:Q9NQE6|uniprotkb:B3KU44|ensembl:ENSP00000361186 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:prpk_human(display_long)|uniprotkb:TP53-regulating kinase(gene name synonym)|uniprotkb:TP53RK(gene name)|psi-mi:TP53RK(display_short)|uniprotkb:C20orf64(gene name synonym)|uniprotkb:PRPK(gene name synonym)|uniprotkb:p53-related protein kinase(gene name synonym)|uniprotkb:Nori-2(gene name synonym)|uniprotkb:Atypical serine/threonine protein kinase TP53RK(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431718|imex:IM-27727-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_291028.3|ensembl:ENSG00000172315(gene)|ensembl:ENST00000372114(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0002039"(p53 binding)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016787"(hydrolase activity)|go:"GO:0070525"(tRNA threonylcarbamoyladenosine metabolic process)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1901796"(regulation of signal transduction by p53 class mediator)|interpro:IPR000719(Protein kinase, core)|interpro:IPR008266(Tyrosine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR022495|rcsb pdb:6WQX|reactome:R-HSA-6782315|reactome:R-HSA-6804756 - - - figure legend:Fig. S8A|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-podocyte)|taxid:9606(human podocyte) - 2020/02/19 2020/02/20 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:sgh5tCNgPpL4E4SmEQhLz6qci109606 rigid:jhJfupTkZ25LEydRTwnDAv9BEzQ false ha tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9BXV9 uniprotkb:Q9Y3C4 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-750123|uniprotkb:D6W5H6|uniprotkb:Q8IWR6|uniprotkb:Q8IWR7|uniprotkb:Q9H3K4|ensembl:ENSP00000272424 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:tprkb_human(display_long)|uniprotkb:PRPK-binding protein(gene name synonym)|uniprotkb:TPRKB(gene name)|psi-mi:TPRKB(display_short)|uniprotkb:TP53RK-binding protein(gene name synonym)|uniprotkb:CGI-121(orf name)|uniprotkb:My019(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431718|imex:IM-27727-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:XP_011531179.1|refseq:XP_011531180.1|refseq:NP_057142.1|refseq:XP_006712090.1|refseq:NP_001317315.1|refseq:NP_001317316.1|refseq:NP_001317317.1|refseq:NP_001317318.1|refseq:NP_001317320.1|refseq:NP_001317321.1|refseq:XP_016859721.1|refseq:XP_016859722.1|refseq:XP_016859723.1|ensembl:ENSG00000144034(gene)|ensembl:ENST00000272424(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0000722"(telomere maintenance via recombination)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0019901"(protein kinase binding)|interpro:IPR013926(Kinase binding protein CGI-121)|interpro:IPR036504|rcsb pdb:3ENP|rcsb pdb:6WQX|reactome:R-HSA-6782315 - - - figure legend:Fig. S8A|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-podocyte)|taxid:9606(human podocyte) - 2020/02/19 2020/02/20 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:hsboCuMYBT3FzLom262TDGm5lOQ9606 rigid:jhJfupTkZ25LEydRTwnDAv9BEzQ false ha tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9BXV9 uniprotkb:Q14657 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-1052105|uniprotkb:Q5HY39|uniprotkb:Q8IZ78|ensembl:ENSP00000349923 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:lage3_human(display_long)|uniprotkb:Protein ITBA2(gene name synonym)|uniprotkb:Protein ESO-3(gene name synonym)|uniprotkb:ITBA2(gene name synonym)|uniprotkb:LAGE3(gene name)|psi-mi:LAGE3(display_short)|uniprotkb:DXS9879E(gene name synonym)|uniprotkb:ESO3(gene name synonym)|uniprotkb:L antigen family member 3(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431718|imex:IM-27727-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_006005.2|ensembl:ENSG00000196976(gene)|ensembl:ENST00000357360(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0008033"(tRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070525"(tRNA threonylcarbamoyladenosine metabolic process)|interpro:IPR015419(Transcription factor Pcc1)|rcsb pdb:6GWJ|reactome:R-HSA-6782315 - - - figure legend:Fig. S8A|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-podocyte)|taxid:9606(human podocyte) - 2020/02/19 2020/02/20 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:i85i7GnA4k4+zsftYKYMk+xWAFM9606 rigid:jhJfupTkZ25LEydRTwnDAv9BEzQ false ha tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9BXV9 uniprotkb:Q9NPF4 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-1056510|uniprotkb:Q6IAC3|ensembl:ENSP00000206542 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:osgep_human(display_long)|uniprotkb:"t(6)A37 threonylcarbamoyladenosine biosynthesis protein OSGEP"(gene name synonym)|uniprotkb:OSGEP(gene name)|psi-mi:OSGEP(display_short)|uniprotkb:GCPL1(gene name synonym)|uniprotkb:O-sialoglycoprotein endopeptidase(gene name synonym)|uniprotkb:tRNA threonylcarbamoyladenosine biosynthesis protein OSGEP(gene name synonym)|uniprotkb:N6-L-threonylcarbamoyladenine synthase(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431718|imex:IM-27727-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_060277.1|ensembl:ENSG00000092094(gene)|ensembl:ENST00000206542(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0016607"(nuclear speck)|go:"GO:0046872"(metal ion binding)|go:"GO:0061711"("N(6)-L-threonylcarbamoyladenine synthase activity")|interpro:IPR000905(Peptidase M22, glycoprotease)|interpro:IPR017860|interpro:IPR017861|interpro:IPR034680|interpro:IPR043129|mint:Q9NPF4|rcsb pdb:6GWJ|reactome:R-HSA-6782315 - - - figure legend:Fig. S8A|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-podocyte)|taxid:9606(human podocyte) - 2020/02/19 2020/02/20 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:gdWaUekKJ7WFXfPlaleW9Dpmsi89606 rigid:jhJfupTkZ25LEydRTwnDAv9BEzQ false ha tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9BXV9 uniprotkb:Q14657 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-1052105|uniprotkb:Q5HY39|uniprotkb:Q8IZ78|ensembl:ENSP00000349923 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:lage3_human(display_long)|uniprotkb:Protein ITBA2(gene name synonym)|uniprotkb:Protein ESO-3(gene name synonym)|uniprotkb:ITBA2(gene name synonym)|uniprotkb:LAGE3(gene name)|psi-mi:LAGE3(display_short)|uniprotkb:DXS9879E(gene name synonym)|uniprotkb:ESO3(gene name synonym)|uniprotkb:L antigen family member 3(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431737|imex:IM-27727-16 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_006005.2|ensembl:ENSG00000196976(gene)|ensembl:ENST00000357360(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0008033"(tRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070525"(tRNA threonylcarbamoyladenosine metabolic process)|interpro:IPR015419(Transcription factor Pcc1)|rcsb pdb:6GWJ|reactome:R-HSA-6782315 - - - figure legend:Fig. S8B|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2020/02/19 2020/02/20 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:i85i7GnA4k4+zsftYKYMk+xWAFM9606 rigid:3y3ZESJngBLKvBIPRuF9StT+t24 false ha tag:?-? v5 tag:?-?|mutation with no effect:106-106(rs1557211306)|mutation with no effect:137-137(rs1557211209) - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q9BXV9 uniprotkb:Q14657 intact:EBI-6256593|ensembl:ENSP00000306320|ensembl:ENSP00000478863|uniprotkb:Q0D2N1|uniprotkb:Q0P6C4|uniprotkb:Q3B7W5 intact:EBI-1052105|uniprotkb:Q5HY39|uniprotkb:Q8IZ78|ensembl:ENSP00000349923 psi-mi:gon7_human(display_long)|uniprotkb:GON7(gene name)|psi-mi:GON7(display_short)|uniprotkb:C14orf142(orf name) psi-mi:lage3_human(display_long)|uniprotkb:Protein ITBA2(gene name synonym)|uniprotkb:Protein ESO-3(gene name synonym)|uniprotkb:ITBA2(gene name synonym)|uniprotkb:LAGE3(gene name)|psi-mi:LAGE3(display_short)|uniprotkb:DXS9879E(gene name synonym)|uniprotkb:ESO3(gene name synonym)|uniprotkb:L antigen family member 3(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Arrondel et al. (2019) pubmed:31481669|imex:IM-27727 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-25431755|imex:IM-27727-18 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170270(gene)|ensembl:ENSG00000275619(gene)|ensembl:ENST00000306954(transcript)|ensembl:ENST00000621279(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|interpro:IPR027893|rcsb pdb:6GWJ|refseq:NP_115879.2 refseq:NP_006005.2|ensembl:ENSG00000196976(gene)|ensembl:ENST00000357360(transcript)|go:"GO:0000408"(EKC/KEOPS complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0008033"(tRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070525"(tRNA threonylcarbamoyladenosine metabolic process)|interpro:IPR015419(Transcription factor Pcc1)|rcsb pdb:6GWJ|reactome:R-HSA-6782315 - - - figure legend:Fig. S8B|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2020/02/19 2020/02/20 rogid:0VNjWOL8/4kDs/rbUhSgejc9blU9606 rogid:i85i7GnA4k4+zsftYKYMk+xWAFM9606 rigid:3y3ZESJngBLKvBIPRuF9StT+t24 false ha tag:?-? v5 tag:?-?|mutation with no effect:106-106(rs1557211306)|mutation with no effect:137-137(rs1557211209) - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot)