#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P12493-PRO_0000038560 uniprotkb:P12493-PRO_0000038560 intact:EBI-20727190 intact:EBI-20727190 psi-mi:p12493-pro_0000038560(display_long)|uniprotkb:Pr55Gag(gene name synonym)|uniprotkb:gag(gene name)|psi-mi:gag(display_short) psi-mi:p12493-pro_0000038560(display_long)|uniprotkb:Pr55Gag(gene name synonym)|uniprotkb:gag(gene name)|psi-mi:gag(display_short) psi-mi:"MI:0114"(x-ray crystallography) Dick et al. (2018) imex:IM-26795|pubmed:30069050 taxid:11698(hv1n5)|taxid:11698("Human immunodeficiency virus type 1 group M subtype B (isolate NY5) (HIV-1)") taxid:11698(hv1n5)|taxid:11698("Human immunodeficiency virus type 1 group M subtype B (isolate NY5) (HIV-1)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-20727107|wwpdb:6BHT|wwpdb:6BHS|imex:IM-26795-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-20727140(chain-parent) intact:EBI-20727140(chain-parent) - chain-seq-start:133|chain-seq-end:363 chain-seq-start:133|chain-seq-end:363 figure legend:Fig 1b, Extended Data Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2018/08/30 2018/09/04 rogid:5u/G2V/o1swaXMUhq12aJv7SZBA11698 rogid:5u/G2V/o1swaXMUhq12aJv7SZBA11698 rigid:pUpNe6QrCLWzKs0adiZmHL8B2K0 false mutation:184-184,14-14,45-45,185-185 mutation:184-184,14-14,45-45,185-185 6 0 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P03347 uniprotkb:P03347 intact:EBI-1220741|uniprotkb:P03350 intact:EBI-1220741|uniprotkb:P03350 psi-mi:gag_hv1b1(display_long)|uniprotkb:gag(gene name)|psi-mi:gag(display_short)|uniprotkb:Pr55Gag(gene name synonym) psi-mi:gag_hv1b1(display_long)|uniprotkb:gag(gene name)|psi-mi:gag(display_short)|uniprotkb:Pr55Gag(gene name synonym) psi-mi:"MI:0114"(x-ray crystallography) Dick et al. (2018) imex:IM-26795|pubmed:30069050 taxid:11678(hv1b1)|taxid:11678("Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1)") taxid:11678(hv1b1)|taxid:11678("Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-20727202|wwpdb:6BHR|imex:IM-26795-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR000721(Retroviral nucleocapsid protein Gag)|interpro:IPR014817(Gag protein p6)|interpro:IPR000071(Immunodeficiency lentiviral matrix, N-terminal)|interpro:IPR008916(Retrovirus capsid, C-terminal)|interpro:IPR008919(Retrovirus capsid, N-terminal core)|interpro:IPR010999(Retroviral matrix, N-terminal)|interpro:IPR001878(Zinc finger, CCHC-type)|rcsb pdb:5KP9|interpro:IPR012344(Lentiviral and alpha-retroviral matrix protein, N-terminal)|rcsb pdb:2BUO|interpro:IPR036875|rcsb pdb:6BHR|go:"GO:0003723"(RNA binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016020"(membrane)|go:"GO:0019013"(viral nucleocapsid)|go:"GO:0020002"(host cell plasma membrane)|go:"GO:0039702"(viral budding via host ESCRT complex)|go:"GO:0042025"(host cell nucleus)|go:"GO:0042802"(identical protein binding)|go:"GO:0055036"(virion membrane)|go:"GO:0072494"(host multivesicular body) interpro:IPR000721(Retroviral nucleocapsid protein Gag)|interpro:IPR014817(Gag protein p6)|interpro:IPR000071(Immunodeficiency lentiviral matrix, N-terminal)|interpro:IPR008916(Retrovirus capsid, C-terminal)|interpro:IPR008919(Retrovirus capsid, N-terminal core)|interpro:IPR010999(Retroviral matrix, N-terminal)|interpro:IPR001878(Zinc finger, CCHC-type)|rcsb pdb:5KP9|interpro:IPR012344(Lentiviral and alpha-retroviral matrix protein, N-terminal)|rcsb pdb:2BUO|interpro:IPR036875|rcsb pdb:6BHR|go:"GO:0003723"(RNA binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016020"(membrane)|go:"GO:0019013"(viral nucleocapsid)|go:"GO:0020002"(host cell plasma membrane)|go:"GO:0039702"(viral budding via host ESCRT complex)|go:"GO:0042025"(host cell nucleus)|go:"GO:0042802"(identical protein binding)|go:"GO:0055036"(virion membrane)|go:"GO:0072494"(host multivesicular body) - - - figure legend:Fig 2 d,e; Extended Data Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2018/08/30 2018/09/05 rogid:/QyeVkPxGb6ZIKDIy4vE/qfVCII11678 rogid:/QyeVkPxGb6ZIKDIy4vE/qfVCII11678 rigid:W0/M46jijb/CfGShUFiFYKmFGlE false binding-associated region:278-372 binding-associated region:278-372 6 0 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P03347 uniprotkb:P03347 intact:EBI-1220741|uniprotkb:P03350 intact:EBI-1220741|uniprotkb:P03350 psi-mi:gag_hv1b1(display_long)|uniprotkb:gag(gene name)|psi-mi:gag(display_short)|uniprotkb:Pr55Gag(gene name synonym) psi-mi:gag_hv1b1(display_long)|uniprotkb:gag(gene name)|psi-mi:gag(display_short)|uniprotkb:Pr55Gag(gene name synonym) psi-mi:"MI:0410"(3D electron microscopy) Dick et al. (2018) imex:IM-26795|pubmed:30069050 taxid:11678(hv1b1)|taxid:11678("Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1)") taxid:11678(hv1b1)|taxid:11678("Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-20727281|imex:IM-26795-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR000721(Retroviral nucleocapsid protein Gag)|interpro:IPR014817(Gag protein p6)|interpro:IPR000071(Immunodeficiency lentiviral matrix, N-terminal)|interpro:IPR008916(Retrovirus capsid, C-terminal)|interpro:IPR008919(Retrovirus capsid, N-terminal core)|interpro:IPR010999(Retroviral matrix, N-terminal)|interpro:IPR001878(Zinc finger, CCHC-type)|rcsb pdb:5KP9|interpro:IPR012344(Lentiviral and alpha-retroviral matrix protein, N-terminal)|rcsb pdb:2BUO|interpro:IPR036875|rcsb pdb:6BHR|go:"GO:0003723"(RNA binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016020"(membrane)|go:"GO:0019013"(viral nucleocapsid)|go:"GO:0020002"(host cell plasma membrane)|go:"GO:0039702"(viral budding via host ESCRT complex)|go:"GO:0042025"(host cell nucleus)|go:"GO:0042802"(identical protein binding)|go:"GO:0055036"(virion membrane)|go:"GO:0072494"(host multivesicular body) interpro:IPR000721(Retroviral nucleocapsid protein Gag)|interpro:IPR014817(Gag protein p6)|interpro:IPR000071(Immunodeficiency lentiviral matrix, N-terminal)|interpro:IPR008916(Retrovirus capsid, C-terminal)|interpro:IPR008919(Retrovirus capsid, N-terminal core)|interpro:IPR010999(Retroviral matrix, N-terminal)|interpro:IPR001878(Zinc finger, CCHC-type)|rcsb pdb:5KP9|interpro:IPR012344(Lentiviral and alpha-retroviral matrix protein, N-terminal)|rcsb pdb:2BUO|interpro:IPR036875|rcsb pdb:6BHR|go:"GO:0003723"(RNA binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016020"(membrane)|go:"GO:0019013"(viral nucleocapsid)|go:"GO:0020002"(host cell plasma membrane)|go:"GO:0039702"(viral budding via host ESCRT complex)|go:"GO:0042025"(host cell nucleus)|go:"GO:0042802"(identical protein binding)|go:"GO:0055036"(virion membrane)|go:"GO:0072494"(host multivesicular body) - - - figure legend:Fig 2c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2018/08/30 2018/09/05 rogid:/QyeVkPxGb6ZIKDIy4vE/qfVCII11678 rogid:/QyeVkPxGb6ZIKDIy4vE/qfVCII11678 rigid:W0/M46jijb/CfGShUFiFYKmFGlE false binding-associated region:278-372 binding-associated region:278-372 6 0 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)