#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P32657 uniprotkb:P02281 intact:EBI-4574|uniprotkb:D3DM72|ensemblfungi:YER164W intact:EBI-1251201|uniprotkb:Q6AZT0 psi-mi:chd1_yeast(display_long)|uniprotkb:CHD1(gene name)|psi-mi:CHD1(display_short)|uniprotkb:YER164W(locus name)|uniprotkb:SYGP-ORF4(orf name)|uniprotkb:ATP-dependent helicase CHD1(gene name synonym) psi-mi:h2b11_xenla(display_long) psi-mi:"MI:0410"(3D electron microscopy) Farnung et al. (2017) pubmed:29019976|imex:IM-26861 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-20764061|emdb:EMDB-3765|wwpdb:5O9G|imex:IM-26861-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-6362N|refseq:NP_011091.1|sgd:S000000966|mint:P32657|ensemblfungi:YER164W(gene)|ensemblfungi:YER164W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000182"(rDNA binding)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001178"(regulation of transcriptional start site selection at RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0034728"(nucleosome organization)|go:"GO:0035064"(methylated histone binding)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0060303"(regulation of nucleosome density)|go:"GO:0070615"|go:"GO:0071441"(negative regulation of histone H3-K14 acetylation)|go:"GO:0071894"(histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:1900050"(negative regulation of histone exchange)|go:"GO:1902275"(regulation of chromatin organization)|go:"GO:2000104"(negative regulation of DNA-dependent DNA replication)|go:"GO:2000616"(negative regulation of histone H3-K9 acetylation)|interpro:IPR000330(SNF2-related)|interpro:IPR000953(Chromo domain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR009057(Homeodomain-like)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR016197(Chromo domain-like)|interpro:IPR023779|interpro:IPR023780|interpro:IPR025260|interpro:IPR027417|interpro:IPR038718|interpro:IPR041150|rcsb pdb:2DY7|rcsb pdb:2DY8|rcsb pdb:2H1E|rcsb pdb:2XB0|rcsb pdb:3MWY|rcsb pdb:3TED|rcsb pdb:5J70|rcsb pdb:5O9G|rcsb pdb:6FTX|rcsb pdb:6G0L refseq:NP_001086753.1|dip:DIP-38577N|rcsb pdb:1ZLA|rcsb pdb:2F8N|rcsb pdb:2FJ7|rcsb pdb:2NZD|rcsb pdb:3B6F|rcsb pdb:3B6G|rcsb pdb:3KUY|rcsb pdb:3KWQ|rcsb pdb:3KXB|rcsb pdb:3LEL|rcsb pdb:3LJA|rcsb pdb:3LZ0|rcsb pdb:3LZ1|rcsb pdb:3MGP|rcsb pdb:3MGQ|rcsb pdb:3MGR|rcsb pdb:3MGS|rcsb pdb:3MNN|rcsb pdb:3MVD|rcsb pdb:3O62|rcsb pdb:3REH|rcsb pdb:3REI|rcsb pdb:3REJ|rcsb pdb:3REK|rcsb pdb:3REL|rcsb pdb:3TU4|rcsb pdb:3UT9|rcsb pdb:3UTA|rcsb pdb:3UTB|rcsb pdb:4J8U|rcsb pdb:4J8V|rcsb pdb:4J8W|rcsb pdb:4J8X|rcsb pdb:4KGC|rcsb pdb:4KHA|rcsb pdb:4LD9|rcsb pdb:4R8P|rcsb pdb:4WU8|rcsb pdb:4WU9|rcsb pdb:4XUJ|rcsb pdb:6PWV|rcsb pdb:6PWW|rcsb pdb:6PWX|rcsb pdb:6PX1|rcsb pdb:6PX3|rcsb pdb:6R1T|rcsb pdb:6R1U|rcsb pdb:6R25|rcsb pdb:6RYR|rcsb pdb:6RYU|rcsb pdb:6S01|rcsb pdb:6T9L|rcsb pdb:6TDA|rcsb pdb:6TEM|rcsb pdb:6UGM|rcsb pdb:6UH5|rcsb pdb:6UXW|rcsb pdb:6VEN|rcsb pdb:6VYP|rcsb pdb:6W4L|rcsb pdb:6W5I|rcsb pdb:6W5M|rcsb pdb:6W5N|rcsb pdb:6WKR|rcsb pdb:6WZ5|rcsb pdb:6WZ9|rcsb pdb:6X0N|rcsb pdb:6ZHX|rcsb pdb:6ZHY|rcsb pdb:7AT8|rcsb pdb:7CRO|rcsb pdb:7CRP|rcsb pdb:7CRQ|rcsb pdb:6PA7|rcsb pdb:7CRR|rcsb pdb:7E8I|rcsb pdb:7K6P|rcsb pdb:7K6Q|rcsb pdb:4Z66|rcsb pdb:4ZUX|rcsb pdb:5CP6|rcsb pdb:5DNM|rcsb pdb:5DNN|rcsb pdb:5E5A|rcsb pdb:5F99|rcsb pdb:5G2E|rcsb pdb:5HQ2|rcsb pdb:5NL0|rcsb pdb:5O9G|rcsb pdb:5OMX|rcsb pdb:5ONG|rcsb pdb:5ONW|rcsb pdb:5OXV|rcsb pdb:5OY7|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5XF6|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6ESF|rcsb pdb:6ESG|rcsb pdb:6ESH|rcsb pdb:6ESI|rcsb pdb:6FQ5|rcsb pdb:6FQ6|rcsb pdb:6FQ8|rcsb pdb:6I84|rcsb pdb:6IRO|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6J99|rcsb pdb:6JM9|rcsb pdb:6JMA|rcsb pdb:6JYL|rcsb pdb:6K01|rcsb pdb:6K1P|rcsb pdb:6KIU|rcsb pdb:6KIV|rcsb pdb:6KIW|rcsb pdb:6KIX|rcsb pdb:4XZQ|rcsb pdb:6KIZ|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6LTJ|rcsb pdb:4YS3|rcsb pdb:6N1Z|rcsb pdb:6NJ9|rcsb pdb:6NN6|rcsb pdb:6NOG|rcsb pdb:6NQA|rcsb pdb:6NZO|rcsb pdb:6O96|rcsb pdb:6OM3|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR000558(Histone H2B)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1AOI|rcsb pdb:1F66|rcsb pdb:1KX3|rcsb pdb:1KX4|rcsb pdb:1KX5|rcsb pdb:1M18|rcsb pdb:1M19|rcsb pdb:1M1A|rcsb pdb:1P34|rcsb pdb:1P3A|rcsb pdb:1P3B|rcsb pdb:1P3F|rcsb pdb:1P3G|rcsb pdb:1P3I|rcsb pdb:1P3K|rcsb pdb:1P3L|rcsb pdb:1P3M|rcsb pdb:1P3O|rcsb pdb:1P3P|rcsb pdb:1S32|rcsb pdb:1ZBB - crc64:78BDB74C7FEC6BE5 - figure legend:Extended Data Figure 1., Extended Data Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2018/08/16 2018/09/19 rogid:zDUUFnQQP3ZHhvQlcAMRjGIFWVg559292 rogid:+nkA0I7sW2isaEdOjTHa7+jcsDw8355 rigid:mu3Xh4FRiiv5iphHBn9+LxYK8Yk false his tag:n-n|maltose binding protein tag:n-n - 1 1 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32657 uniprotkb:P02281 intact:EBI-4574|uniprotkb:D3DM72|ensemblfungi:YER164W intact:EBI-1251201|uniprotkb:Q6AZT0 psi-mi:chd1_yeast(display_long)|uniprotkb:CHD1(gene name)|psi-mi:CHD1(display_short)|uniprotkb:YER164W(locus name)|uniprotkb:SYGP-ORF4(orf name)|uniprotkb:ATP-dependent helicase CHD1(gene name synonym) psi-mi:h2b11_xenla(display_long) psi-mi:"MI:0410"(3D electron microscopy) Farnung et al. (2017) pubmed:29019976|imex:IM-26861 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-20764061|emdb:EMDB-3765|wwpdb:5O9G|imex:IM-26861-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-6362N|refseq:NP_011091.1|sgd:S000000966|mint:P32657|ensemblfungi:YER164W(gene)|ensemblfungi:YER164W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000182"(rDNA binding)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001178"(regulation of transcriptional start site selection at RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0034728"(nucleosome organization)|go:"GO:0035064"(methylated histone binding)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0060303"(regulation of nucleosome density)|go:"GO:0070615"|go:"GO:0071441"(negative regulation of histone H3-K14 acetylation)|go:"GO:0071894"(histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:1900050"(negative regulation of histone exchange)|go:"GO:1902275"(regulation of chromatin organization)|go:"GO:2000104"(negative regulation of DNA-dependent DNA replication)|go:"GO:2000616"(negative regulation of histone H3-K9 acetylation)|interpro:IPR000330(SNF2-related)|interpro:IPR000953(Chromo domain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR009057(Homeodomain-like)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR016197(Chromo domain-like)|interpro:IPR023779|interpro:IPR023780|interpro:IPR025260|interpro:IPR027417|interpro:IPR038718|interpro:IPR041150|rcsb pdb:2DY7|rcsb pdb:2DY8|rcsb pdb:2H1E|rcsb pdb:2XB0|rcsb pdb:3MWY|rcsb pdb:3TED|rcsb pdb:5J70|rcsb pdb:5O9G|rcsb pdb:6FTX|rcsb pdb:6G0L refseq:NP_001086753.1|dip:DIP-38577N|rcsb pdb:1ZLA|rcsb pdb:2F8N|rcsb pdb:2FJ7|rcsb pdb:2NZD|rcsb pdb:3B6F|rcsb pdb:3B6G|rcsb pdb:3KUY|rcsb pdb:3KWQ|rcsb pdb:3KXB|rcsb pdb:3LEL|rcsb pdb:3LJA|rcsb pdb:3LZ0|rcsb pdb:3LZ1|rcsb pdb:3MGP|rcsb pdb:3MGQ|rcsb pdb:3MGR|rcsb pdb:3MGS|rcsb pdb:3MNN|rcsb pdb:3MVD|rcsb pdb:3O62|rcsb pdb:3REH|rcsb pdb:3REI|rcsb pdb:3REJ|rcsb pdb:3REK|rcsb pdb:3REL|rcsb pdb:3TU4|rcsb pdb:3UT9|rcsb pdb:3UTA|rcsb pdb:3UTB|rcsb pdb:4J8U|rcsb pdb:4J8V|rcsb pdb:4J8W|rcsb pdb:4J8X|rcsb pdb:4KGC|rcsb pdb:4KHA|rcsb pdb:4LD9|rcsb pdb:4R8P|rcsb pdb:4WU8|rcsb pdb:4WU9|rcsb pdb:4XUJ|rcsb pdb:6PWV|rcsb pdb:6PWW|rcsb pdb:6PWX|rcsb pdb:6PX1|rcsb pdb:6PX3|rcsb pdb:6R1T|rcsb pdb:6R1U|rcsb pdb:6R25|rcsb pdb:6RYR|rcsb pdb:6RYU|rcsb pdb:6S01|rcsb pdb:6T9L|rcsb pdb:6TDA|rcsb pdb:6TEM|rcsb pdb:6UGM|rcsb pdb:6UH5|rcsb pdb:6UXW|rcsb pdb:6VEN|rcsb pdb:6VYP|rcsb pdb:6W4L|rcsb pdb:6W5I|rcsb pdb:6W5M|rcsb pdb:6W5N|rcsb pdb:6WKR|rcsb pdb:6WZ5|rcsb pdb:6WZ9|rcsb pdb:6X0N|rcsb pdb:6ZHX|rcsb pdb:6ZHY|rcsb pdb:7AT8|rcsb pdb:7CRO|rcsb pdb:7CRP|rcsb pdb:7CRQ|rcsb pdb:6PA7|rcsb pdb:7CRR|rcsb pdb:7E8I|rcsb pdb:7K6P|rcsb pdb:7K6Q|rcsb pdb:4Z66|rcsb pdb:4ZUX|rcsb pdb:5CP6|rcsb pdb:5DNM|rcsb pdb:5DNN|rcsb pdb:5E5A|rcsb pdb:5F99|rcsb pdb:5G2E|rcsb pdb:5HQ2|rcsb pdb:5NL0|rcsb pdb:5O9G|rcsb pdb:5OMX|rcsb pdb:5ONG|rcsb pdb:5ONW|rcsb pdb:5OXV|rcsb pdb:5OY7|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5XF6|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6ESF|rcsb pdb:6ESG|rcsb pdb:6ESH|rcsb pdb:6ESI|rcsb pdb:6FQ5|rcsb pdb:6FQ6|rcsb pdb:6FQ8|rcsb pdb:6I84|rcsb pdb:6IRO|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6J99|rcsb pdb:6JM9|rcsb pdb:6JMA|rcsb pdb:6JYL|rcsb pdb:6K01|rcsb pdb:6K1P|rcsb pdb:6KIU|rcsb pdb:6KIV|rcsb pdb:6KIW|rcsb pdb:6KIX|rcsb pdb:4XZQ|rcsb pdb:6KIZ|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6LTJ|rcsb pdb:4YS3|rcsb pdb:6N1Z|rcsb pdb:6NJ9|rcsb pdb:6NN6|rcsb pdb:6NOG|rcsb pdb:6NQA|rcsb pdb:6NZO|rcsb pdb:6O96|rcsb pdb:6OM3|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR000558(Histone H2B)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1AOI|rcsb pdb:1F66|rcsb pdb:1KX3|rcsb pdb:1KX4|rcsb pdb:1KX5|rcsb pdb:1M18|rcsb pdb:1M19|rcsb pdb:1M1A|rcsb pdb:1P34|rcsb pdb:1P3A|rcsb pdb:1P3B|rcsb pdb:1P3F|rcsb pdb:1P3G|rcsb pdb:1P3I|rcsb pdb:1P3K|rcsb pdb:1P3L|rcsb pdb:1P3M|rcsb pdb:1P3O|rcsb pdb:1P3P|rcsb pdb:1S32|rcsb pdb:1ZBB - crc64:78BDB74C7FEC6BE5 - figure legend:Extended Data Figure 1., Extended Data Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2018/08/16 2018/09/19 rogid:zDUUFnQQP3ZHhvQlcAMRjGIFWVg559292 rogid:+nkA0I7sW2isaEdOjTHa7+jcsDw8355 rigid:mu3Xh4FRiiv5iphHBn9+LxYK8Yk false his tag:n-n|maltose binding protein tag:n-n - 1 1 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32657 uniprotkb:P84233 intact:EBI-4574|uniprotkb:D3DM72|ensemblfungi:YER164W intact:EBI-350041|uniprotkb:P02295|uniprotkb:P02297|uniprotkb:P16105|uniprotkb:P17269|uniprotkb:A4FVE2|uniprotkb:P17320 psi-mi:chd1_yeast(display_long)|uniprotkb:CHD1(gene name)|psi-mi:CHD1(display_short)|uniprotkb:YER164W(locus name)|uniprotkb:SYGP-ORF4(orf name)|uniprotkb:ATP-dependent helicase CHD1(gene name synonym) psi-mi:h32_xenla(display_long) psi-mi:"MI:0410"(3D electron microscopy) Farnung et al. (2017) pubmed:29019976|imex:IM-26861 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-20764061|emdb:EMDB-3765|wwpdb:5O9G|imex:IM-26861-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-6362N|refseq:NP_011091.1|sgd:S000000966|mint:P32657|ensemblfungi:YER164W(gene)|ensemblfungi:YER164W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000182"(rDNA binding)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001178"(regulation of transcriptional start site selection at RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0034728"(nucleosome organization)|go:"GO:0035064"(methylated histone binding)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0060303"(regulation of nucleosome density)|go:"GO:0070615"|go:"GO:0071441"(negative regulation of histone H3-K14 acetylation)|go:"GO:0071894"(histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:1900050"(negative regulation of histone exchange)|go:"GO:1902275"(regulation of chromatin organization)|go:"GO:2000104"(negative regulation of DNA-dependent DNA replication)|go:"GO:2000616"(negative regulation of histone H3-K9 acetylation)|interpro:IPR000330(SNF2-related)|interpro:IPR000953(Chromo domain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR009057(Homeodomain-like)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR016197(Chromo domain-like)|interpro:IPR023779|interpro:IPR023780|interpro:IPR025260|interpro:IPR027417|interpro:IPR038718|interpro:IPR041150|rcsb pdb:2DY7|rcsb pdb:2DY8|rcsb pdb:2H1E|rcsb pdb:2XB0|rcsb pdb:3MWY|rcsb pdb:3TED|rcsb pdb:5J70|rcsb pdb:5O9G|rcsb pdb:6FTX|rcsb pdb:6G0L refseq:NP_001091428.1|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:5DNM|rcsb pdb:5DNN|rcsb pdb:5E5A|rcsb pdb:5F99|rcsb pdb:5HQ2|rcsb pdb:5KGF|rcsb pdb:5MLU|rcsb pdb:5NL0|rcsb pdb:5O9G|rcsb pdb:5OMX|rcsb pdb:5ONG|rcsb pdb:5ONW|rcsb pdb:5OXV|rcsb pdb:5OY7|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5XBK|rcsb pdb:5XF6|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6ESF|rcsb pdb:6ESG|rcsb pdb:6ESH|rcsb pdb:6ESI|rcsb pdb:6FQ5|rcsb pdb:6FQ6|rcsb pdb:6I84|rcsb pdb:6IRO|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6JM9|rcsb pdb:6JMA|rcsb pdb:6KIU|rcsb pdb:6KIV|rcsb pdb:6KIW|rcsb pdb:6KIX|rcsb pdb:6KIZ|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6NE3|rcsb pdb:6NJ9|rcsb pdb:6NN6|rcsb pdb:6NOG|rcsb pdb:6NQA|rcsb pdb:6O22|rcsb pdb:6O96|rcsb pdb:6OM3|rcsb pdb:6PA7|rcsb pdb:6PWV|rcsb pdb:6PWW|rcsb pdb:6PWX|rcsb pdb:6R1T|rcsb pdb:6R1U|rcsb pdb:6R25|rcsb pdb:6RYR|rcsb pdb:6RYU|rcsb pdb:6S01|rcsb pdb:6T9L|rcsb pdb:6TDA|rcsb pdb:6UH5|rcsb pdb:6UXW|rcsb pdb:6VEN|rcsb pdb:6VYP|rcsb pdb:6W5I|rcsb pdb:6W5M|rcsb pdb:6W5N|rcsb pdb:6WKR|rcsb pdb:6WZ5|rcsb pdb:6WZ9|rcsb pdb:6X0N|rcsb pdb:6Z6P|rcsb pdb:7AT8|rcsb pdb:7K6P|rcsb pdb:7K6Q|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1F66|rcsb pdb:1KX3|rcsb pdb:1KX4|rcsb pdb:1KX5|rcsb pdb:1P34|rcsb pdb:1P3A|rcsb pdb:1P3B|rcsb pdb:1P3F|rcsb pdb:1P3G|rcsb pdb:1P3I|rcsb pdb:1P3K|rcsb pdb:1P3L|rcsb pdb:1P3M|rcsb pdb:1P3O|rcsb pdb:1P3P|rcsb pdb:1S32|rcsb pdb:1ZBB|rcsb pdb:1ZLA|rcsb pdb:2F8N|rcsb pdb:2FJ7|rcsb pdb:2HUE|rcsb pdb:2IO5|rcsb pdb:2L11|rcsb pdb:2L12|rcsb pdb:2NZD|rcsb pdb:3B6F|rcsb pdb:3B6G|rcsb pdb:3C1B|rcsb pdb:3C1C|rcsb pdb:3GV6|rcsb pdb:3KUY|rcsb pdb:3KWQ|rcsb pdb:4ZUX|rcsb pdb:3KXB|rcsb pdb:3LEL|rcsb pdb:3LJA|rcsb pdb:3LZ0|rcsb pdb:5BS7|rcsb pdb:3LZ1|rcsb pdb:3MGP|rcsb pdb:5BSA|rcsb pdb:3MGQ|rcsb pdb:3MGR|rcsb pdb:5CP6|rcsb pdb:3MGS|rcsb pdb:3MNN|rcsb pdb:3MVD|rcsb pdb:3O62|rcsb pdb:3REH|rcsb pdb:3REI|rcsb pdb:3REJ|rcsb pdb:3REK|rcsb pdb:3REL|rcsb pdb:3TU4|rcsb pdb:3UT9|rcsb pdb:3UTA|rcsb pdb:3UTB|rcsb pdb:4EO5|rcsb pdb:4J8U|rcsb pdb:4J8V|rcsb pdb:4J8W|rcsb pdb:4J8X|rcsb pdb:4KGC|rcsb pdb:4LD9|rcsb pdb:4QEO|rcsb pdb:4R8P|rcsb pdb:4WU8|rcsb pdb:4WU9|rcsb pdb:4XUJ|rcsb pdb:4XZQ|rcsb pdb:4YS3|rcsb pdb:4Z66|refseq:XP_018079657.1|refseq:XP_018096294.1|refseq:XP_018096295.1|refseq:XP_018096296.1|refseq:XP_018098036.1|refseq:XP_018118226.1|refseq:XP_018118227.1|dip:DIP-37430N - crc64:78BDB74C7FEC6BE5 - figure legend:Extended Data Figure 1., Extended Data Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2018/08/16 2018/09/19 rogid:zDUUFnQQP3ZHhvQlcAMRjGIFWVg559292 rogid:2TuVqWkeAnhHR4nrl0GNyUj1N3o8355 rigid:mu3Xh4FRiiv5iphHBn9+LxYK8Yk false his tag:n-n|maltose binding protein tag:n-n - 1 2 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32657 uniprotkb:P62799 intact:EBI-4574|uniprotkb:D3DM72|ensemblfungi:YER164W intact:EBI-302085|uniprotkb:P02304|uniprotkb:P02305|uniprotkb:Q6AZG5 psi-mi:chd1_yeast(display_long)|uniprotkb:CHD1(gene name)|psi-mi:CHD1(display_short)|uniprotkb:YER164W(locus name)|uniprotkb:SYGP-ORF4(orf name)|uniprotkb:ATP-dependent helicase CHD1(gene name synonym) psi-mi:h4_xenla(display_long) psi-mi:"MI:0410"(3D electron microscopy) Farnung et al. (2017) pubmed:29019976|imex:IM-26861 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-20764061|emdb:EMDB-3765|wwpdb:5O9G|imex:IM-26861-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-6362N|refseq:NP_011091.1|sgd:S000000966|mint:P32657|ensemblfungi:YER164W(gene)|ensemblfungi:YER164W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000182"(rDNA binding)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001178"(regulation of transcriptional start site selection at RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0034728"(nucleosome organization)|go:"GO:0035064"(methylated histone binding)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0060303"(regulation of nucleosome density)|go:"GO:0070615"|go:"GO:0071441"(negative regulation of histone H3-K14 acetylation)|go:"GO:0071894"(histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:1900050"(negative regulation of histone exchange)|go:"GO:1902275"(regulation of chromatin organization)|go:"GO:2000104"(negative regulation of DNA-dependent DNA replication)|go:"GO:2000616"(negative regulation of histone H3-K9 acetylation)|interpro:IPR000330(SNF2-related)|interpro:IPR000953(Chromo domain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR009057(Homeodomain-like)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR016197(Chromo domain-like)|interpro:IPR023779|interpro:IPR023780|interpro:IPR025260|interpro:IPR027417|interpro:IPR038718|interpro:IPR041150|rcsb pdb:2DY7|rcsb pdb:2DY8|rcsb pdb:2H1E|rcsb pdb:2XB0|rcsb pdb:3MWY|rcsb pdb:3TED|rcsb pdb:5J70|rcsb pdb:5O9G|rcsb pdb:6FTX|rcsb pdb:6G0L go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006352"(DNA-templated transcription, initiation)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR001951(Histone H4)|interpro:IPR004823("TATA box binding protein associated factor (TAF)")|interpro:IPR009072(Histone-fold)|interpro:IPR019809|interpro:IPR035425|rcsb pdb:1AOI|rcsb pdb:1KX3|rcsb pdb:1KX4|rcsb pdb:1KX5|rcsb pdb:1M18|rcsb pdb:1M19|rcsb pdb:1M1A|rcsb pdb:1P34|rcsb pdb:1P3A|rcsb pdb:1P3B|rcsb pdb:1P3F|rcsb pdb:1P3G|rcsb pdb:1P3I|rcsb pdb:1P3K|rcsb pdb:1P3L|rcsb pdb:1P3M|rcsb pdb:1P3O|rcsb pdb:1P3P|rcsb pdb:1S32|rcsb pdb:5BSA|rcsb pdb:5CP6|rcsb pdb:5DNM|rcsb pdb:5DNN|rcsb pdb:5E5A|rcsb pdb:5F99|rcsb pdb:5HQ2|rcsb pdb:5KGF|rcsb pdb:5MLU|rcsb pdb:5NL0|rcsb pdb:5O9G|rcsb pdb:5OMX|rcsb pdb:5ONG|rcsb pdb:5ONW|rcsb pdb:5OXV|rcsb pdb:5OY7|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5XF6|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6ESF|rcsb pdb:6ESG|rcsb pdb:6ESH|rcsb pdb:6ESI|rcsb pdb:6FQ5|rcsb pdb:6FQ6|rcsb pdb:1ZBB|rcsb pdb:1ZLA|rcsb pdb:2F8N|rcsb pdb:2FJ7|rcsb pdb:2HUE|rcsb pdb:2IO5|rcsb pdb:2NZD|rcsb pdb:3B6F|rcsb pdb:3B6G|rcsb pdb:3C1B|rcsb pdb:3C1C|rcsb pdb:3KUY|rcsb pdb:3KWQ|rcsb pdb:3KXB|rcsb pdb:3LEL|rcsb pdb:3LJA|rcsb pdb:3LZ0|rcsb pdb:3LZ1|rcsb pdb:3MGP|rcsb pdb:3MGQ|rcsb pdb:3MGR|rcsb pdb:3MGS|rcsb pdb:3MNN|rcsb pdb:3MVD|rcsb pdb:3O62|rcsb pdb:3REH|rcsb pdb:3REI|rcsb pdb:3REJ|rcsb pdb:3REK|rcsb pdb:3REL|rcsb pdb:3TU4|rcsb pdb:3UT9|rcsb pdb:3UTA|rcsb pdb:3UTB|rcsb pdb:4EO5|rcsb pdb:4J8U|rcsb pdb:4J8V|rcsb pdb:4J8W|rcsb pdb:4J8X|rcsb pdb:4KGC|rcsb pdb:4LD9|rcsb pdb:4R8P|rcsb pdb:4WU8|rcsb pdb:4WU9|rcsb pdb:4XUJ|rcsb pdb:4XZQ|rcsb pdb:4YS3|rcsb pdb:4Z66|rcsb pdb:4ZBJ|rcsb pdb:4ZUX|rcsb pdb:5BS7|rcsb pdb:6FQ8|rcsb pdb:6PWW|rcsb pdb:6FTX|rcsb pdb:6G0L|rcsb pdb:6GYT|rcsb pdb:6I84|rcsb pdb:6IRO|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6J99|rcsb pdb:6JM9|rcsb pdb:6JMA|rcsb pdb:6JYL|rcsb pdb:6K1P|rcsb pdb:6KIU|rcsb pdb:6KIV|rcsb pdb:6KIW|rcsb pdb:6KIX|rcsb pdb:6KIZ|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6LTJ|rcsb pdb:6NE3|rcsb pdb:6NJ9|rcsb pdb:6NN6|rcsb pdb:6NOG|rcsb pdb:6NQA|rcsb pdb:6NZO|rcsb pdb:6O22|rcsb pdb:6O96|rcsb pdb:6OM3|rcsb pdb:6PA7|rcsb pdb:6PWV|refseq:NP_001087926.1|rcsb pdb:6W5M|rcsb pdb:6W5N|rcsb pdb:6WKR|rcsb pdb:6WZ5|rcsb pdb:6WZ9|rcsb pdb:6X0N|rcsb pdb:6ZHX|rcsb pdb:6ZHY|rcsb pdb:7AT8|rcsb pdb:7CRO|rcsb pdb:7CRP|rcsb pdb:7CRQ|rcsb pdb:7CRR|rcsb pdb:7E8I|rcsb pdb:7K6P|rcsb pdb:7K6Q|rcsb pdb:7KTQ|rcsb pdb:6PWX|rcsb pdb:6PX1|rcsb pdb:6PX3|rcsb pdb:6R1T|rcsb pdb:6R1U|rcsb pdb:6R25|rcsb pdb:6RYR|rcsb pdb:6RYU|rcsb pdb:6S01|rcsb pdb:6T9L|rcsb pdb:6TDA|rcsb pdb:6TEM|rcsb pdb:6UGM|rcsb pdb:6UH5|rcsb pdb:6UXW|rcsb pdb:6VEN|rcsb pdb:6VYP|rcsb pdb:6VZ4|rcsb pdb:6W5I|dip:DIP-37429N|refseq:XP_018095104.1|refseq:XP_018095605.1|refseq:XP_018095606.1|refseq:XP_018096302.1|refseq:XP_018097458.1|refseq:XP_018098137.1|refseq:XP_018118237.1|refseq:XP_018120359.1|refseq:XP_018120360.1 - crc64:78BDB74C7FEC6BE5 - figure legend:Extended Data Figure 1., Extended Data Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2018/08/16 2018/09/19 rogid:zDUUFnQQP3ZHhvQlcAMRjGIFWVg559292 rogid:LZSfhrpw0PcDREEoJ1UMkBvnUfA8355 rigid:mu3Xh4FRiiv5iphHBn9+LxYK8Yk false his tag:n-n|maltose binding protein tag:n-n - 1 2 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32657 uniprotkb:Q6AZJ8 intact:EBI-4574|uniprotkb:D3DM72|ensemblfungi:YER164W intact:EBI-1265425 psi-mi:chd1_yeast(display_long)|uniprotkb:CHD1(gene name)|psi-mi:CHD1(display_short)|uniprotkb:YER164W(locus name)|uniprotkb:SYGP-ORF4(orf name)|uniprotkb:ATP-dependent helicase CHD1(gene name synonym) psi-mi:q6azj8_xenla(display_long)|uniprotkb:h2ac14.L(gene name)|psi-mi:h2ac14.L(display_short)|uniprotkb:LOC494591(gene name synonym)|uniprotkb:h2ac14(gene name synonym)|uniprotkb:hist1h2aj(gene name synonym)|uniprotkb:XELAEV_18003602mg(orf name) psi-mi:"MI:0410"(3D electron microscopy) Farnung et al. (2017) pubmed:29019976|imex:IM-26861 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-20764061|emdb:EMDB-3765|wwpdb:5O9G|imex:IM-26861-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-6362N|refseq:NP_011091.1|sgd:S000000966|mint:P32657|ensemblfungi:YER164W(gene)|ensemblfungi:YER164W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000182"(rDNA binding)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001178"(regulation of transcriptional start site selection at RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0034728"(nucleosome organization)|go:"GO:0035064"(methylated histone binding)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0060303"(regulation of nucleosome density)|go:"GO:0070615"|go:"GO:0071441"(negative regulation of histone H3-K14 acetylation)|go:"GO:0071894"(histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:1900050"(negative regulation of histone exchange)|go:"GO:1902275"(regulation of chromatin organization)|go:"GO:2000104"(negative regulation of DNA-dependent DNA replication)|go:"GO:2000616"(negative regulation of histone H3-K9 acetylation)|interpro:IPR000330(SNF2-related)|interpro:IPR000953(Chromo domain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR009057(Homeodomain-like)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR016197(Chromo domain-like)|interpro:IPR023779|interpro:IPR023780|interpro:IPR025260|interpro:IPR027417|interpro:IPR038718|interpro:IPR041150|rcsb pdb:2DY7|rcsb pdb:2DY8|rcsb pdb:2H1E|rcsb pdb:2XB0|rcsb pdb:3MWY|rcsb pdb:3TED|rcsb pdb:5J70|rcsb pdb:5O9G|rcsb pdb:6FTX|rcsb pdb:6G0L refseq:NP_001087948.1|dip:DIP-38576N|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR002119(Histone H2A)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|interpro:IPR032454|interpro:IPR032458|rcsb pdb:3KXB|rcsb pdb:3LEL|rcsb pdb:3LZ0|rcsb pdb:3LZ1|rcsb pdb:3MGP|rcsb pdb:3MGQ|rcsb pdb:3MGR|rcsb pdb:3MGS|rcsb pdb:3MVD|rcsb pdb:4KGC|rcsb pdb:4KHA|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6ESF|rcsb pdb:6ESG|rcsb pdb:6ESH|rcsb pdb:6ESI|rcsb pdb:6J99|rcsb pdb:6JM9|rcsb pdb:6JMA|rcsb pdb:6JYL|rcsb pdb:6K01|rcsb pdb:6K1P|rcsb pdb:6UGM|rcsb pdb:6UH5|rcsb pdb:6VZ4|rcsb pdb:6W5I|rcsb pdb:6Z6P|rcsb pdb:7AT8|rcsb pdb:7KTQ - crc64:78BDB74C7FEC6BE5 - figure legend:Extended Data Figure 1., Extended Data Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2018/08/16 2018/09/19 rogid:zDUUFnQQP3ZHhvQlcAMRjGIFWVg559292 rogid:E7iU5tlv8Az4uOlSHgPXi/4WcnE8355 rigid:mu3Xh4FRiiv5iphHBn9+LxYK8Yk false his tag:n-n|maltose binding protein tag:n-n - 1 2 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32657 uniprotkb:P02281 intact:EBI-4574|uniprotkb:D3DM72|ensemblfungi:YER164W intact:EBI-1251201|uniprotkb:Q6AZT0 psi-mi:chd1_yeast(display_long)|uniprotkb:CHD1(gene name)|psi-mi:CHD1(display_short)|uniprotkb:YER164W(locus name)|uniprotkb:SYGP-ORF4(orf name)|uniprotkb:ATP-dependent helicase CHD1(gene name synonym) psi-mi:h2b11_xenla(display_long) psi-mi:"MI:0071"(molecular sieving) Farnung et al. (2017) pubmed:29019976|imex:IM-26861 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-20768633|imex:IM-26861-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-6362N|refseq:NP_011091.1|sgd:S000000966|mint:P32657|ensemblfungi:YER164W(gene)|ensemblfungi:YER164W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000182"(rDNA binding)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001178"(regulation of transcriptional start site selection at RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0034728"(nucleosome organization)|go:"GO:0035064"(methylated histone binding)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0060303"(regulation of nucleosome density)|go:"GO:0070615"|go:"GO:0071441"(negative regulation of histone H3-K14 acetylation)|go:"GO:0071894"(histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:1900050"(negative regulation of histone exchange)|go:"GO:1902275"(regulation of chromatin organization)|go:"GO:2000104"(negative regulation of DNA-dependent DNA replication)|go:"GO:2000616"(negative regulation of histone H3-K9 acetylation)|interpro:IPR000330(SNF2-related)|interpro:IPR000953(Chromo domain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR009057(Homeodomain-like)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR016197(Chromo domain-like)|interpro:IPR023779|interpro:IPR023780|interpro:IPR025260|interpro:IPR027417|interpro:IPR038718|interpro:IPR041150|rcsb pdb:2DY7|rcsb pdb:2DY8|rcsb pdb:2H1E|rcsb pdb:2XB0|rcsb pdb:3MWY|rcsb pdb:3TED|rcsb pdb:5J70|rcsb pdb:5O9G|rcsb pdb:6FTX|rcsb pdb:6G0L refseq:NP_001086753.1|dip:DIP-38577N|rcsb pdb:1ZLA|rcsb pdb:2F8N|rcsb pdb:2FJ7|rcsb pdb:2NZD|rcsb pdb:3B6F|rcsb pdb:3B6G|rcsb pdb:3KUY|rcsb pdb:3KWQ|rcsb pdb:3KXB|rcsb pdb:3LEL|rcsb pdb:3LJA|rcsb pdb:3LZ0|rcsb pdb:3LZ1|rcsb pdb:3MGP|rcsb pdb:3MGQ|rcsb pdb:3MGR|rcsb pdb:3MGS|rcsb pdb:3MNN|rcsb pdb:3MVD|rcsb pdb:3O62|rcsb pdb:3REH|rcsb pdb:3REI|rcsb pdb:3REJ|rcsb pdb:3REK|rcsb pdb:3REL|rcsb pdb:3TU4|rcsb pdb:3UT9|rcsb pdb:3UTA|rcsb pdb:3UTB|rcsb pdb:4J8U|rcsb pdb:4J8V|rcsb pdb:4J8W|rcsb pdb:4J8X|rcsb pdb:4KGC|rcsb pdb:4KHA|rcsb pdb:4LD9|rcsb pdb:4R8P|rcsb pdb:4WU8|rcsb pdb:4WU9|rcsb pdb:4XUJ|rcsb pdb:6PWV|rcsb pdb:6PWW|rcsb pdb:6PWX|rcsb pdb:6PX1|rcsb pdb:6PX3|rcsb pdb:6R1T|rcsb pdb:6R1U|rcsb pdb:6R25|rcsb pdb:6RYR|rcsb pdb:6RYU|rcsb pdb:6S01|rcsb pdb:6T9L|rcsb pdb:6TDA|rcsb pdb:6TEM|rcsb pdb:6UGM|rcsb pdb:6UH5|rcsb pdb:6UXW|rcsb pdb:6VEN|rcsb pdb:6VYP|rcsb pdb:6W4L|rcsb pdb:6W5I|rcsb pdb:6W5M|rcsb pdb:6W5N|rcsb pdb:6WKR|rcsb pdb:6WZ5|rcsb pdb:6WZ9|rcsb pdb:6X0N|rcsb pdb:6ZHX|rcsb pdb:6ZHY|rcsb pdb:7AT8|rcsb pdb:7CRO|rcsb pdb:7CRP|rcsb pdb:7CRQ|rcsb pdb:6PA7|rcsb pdb:7CRR|rcsb pdb:7E8I|rcsb pdb:7K6P|rcsb pdb:7K6Q|rcsb pdb:4Z66|rcsb pdb:4ZUX|rcsb pdb:5CP6|rcsb pdb:5DNM|rcsb pdb:5DNN|rcsb pdb:5E5A|rcsb pdb:5F99|rcsb pdb:5G2E|rcsb pdb:5HQ2|rcsb pdb:5NL0|rcsb pdb:5O9G|rcsb pdb:5OMX|rcsb pdb:5ONG|rcsb pdb:5ONW|rcsb pdb:5OXV|rcsb pdb:5OY7|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5XF6|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6ESF|rcsb pdb:6ESG|rcsb pdb:6ESH|rcsb pdb:6ESI|rcsb pdb:6FQ5|rcsb pdb:6FQ6|rcsb pdb:6FQ8|rcsb pdb:6I84|rcsb pdb:6IRO|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6J99|rcsb pdb:6JM9|rcsb pdb:6JMA|rcsb pdb:6JYL|rcsb pdb:6K01|rcsb pdb:6K1P|rcsb pdb:6KIU|rcsb pdb:6KIV|rcsb pdb:6KIW|rcsb pdb:6KIX|rcsb pdb:4XZQ|rcsb pdb:6KIZ|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6LTJ|rcsb pdb:4YS3|rcsb pdb:6N1Z|rcsb pdb:6NJ9|rcsb pdb:6NN6|rcsb pdb:6NOG|rcsb pdb:6NQA|rcsb pdb:6NZO|rcsb pdb:6O96|rcsb pdb:6OM3|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR000558(Histone H2B)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1AOI|rcsb pdb:1F66|rcsb pdb:1KX3|rcsb pdb:1KX4|rcsb pdb:1KX5|rcsb pdb:1M18|rcsb pdb:1M19|rcsb pdb:1M1A|rcsb pdb:1P34|rcsb pdb:1P3A|rcsb pdb:1P3B|rcsb pdb:1P3F|rcsb pdb:1P3G|rcsb pdb:1P3I|rcsb pdb:1P3K|rcsb pdb:1P3L|rcsb pdb:1P3M|rcsb pdb:1P3O|rcsb pdb:1P3P|rcsb pdb:1S32|rcsb pdb:1ZBB - crc64:78BDB74C7FEC6BE5 - figure legend:Extended Data Figure 1a, Supplementary Fig. 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2018/08/16 2018/10/02 rogid:zDUUFnQQP3ZHhvQlcAMRjGIFWVg559292 rogid:+nkA0I7sW2isaEdOjTHa7+jcsDw8355 rigid:mu3Xh4FRiiv5iphHBn9+LxYK8Yk false - - - - psi-mi:"MI:0396"(predetermined participant)|psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0396"(predetermined participant)|psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P32657 uniprotkb:P02281 intact:EBI-4574|uniprotkb:D3DM72|ensemblfungi:YER164W intact:EBI-1251201|uniprotkb:Q6AZT0 psi-mi:chd1_yeast(display_long)|uniprotkb:CHD1(gene name)|psi-mi:CHD1(display_short)|uniprotkb:YER164W(locus name)|uniprotkb:SYGP-ORF4(orf name)|uniprotkb:ATP-dependent helicase CHD1(gene name synonym) psi-mi:h2b11_xenla(display_long) psi-mi:"MI:0071"(molecular sieving) Farnung et al. (2017) pubmed:29019976|imex:IM-26861 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-20768633|imex:IM-26861-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-6362N|refseq:NP_011091.1|sgd:S000000966|mint:P32657|ensemblfungi:YER164W(gene)|ensemblfungi:YER164W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000182"(rDNA binding)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001178"(regulation of transcriptional start site selection at RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0034728"(nucleosome organization)|go:"GO:0035064"(methylated histone binding)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0060303"(regulation of nucleosome density)|go:"GO:0070615"|go:"GO:0071441"(negative regulation of histone H3-K14 acetylation)|go:"GO:0071894"(histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:1900050"(negative regulation of histone exchange)|go:"GO:1902275"(regulation of chromatin organization)|go:"GO:2000104"(negative regulation of DNA-dependent DNA replication)|go:"GO:2000616"(negative regulation of histone H3-K9 acetylation)|interpro:IPR000330(SNF2-related)|interpro:IPR000953(Chromo domain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR009057(Homeodomain-like)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR016197(Chromo domain-like)|interpro:IPR023779|interpro:IPR023780|interpro:IPR025260|interpro:IPR027417|interpro:IPR038718|interpro:IPR041150|rcsb pdb:2DY7|rcsb pdb:2DY8|rcsb pdb:2H1E|rcsb pdb:2XB0|rcsb pdb:3MWY|rcsb pdb:3TED|rcsb pdb:5J70|rcsb pdb:5O9G|rcsb pdb:6FTX|rcsb pdb:6G0L refseq:NP_001086753.1|dip:DIP-38577N|rcsb pdb:1ZLA|rcsb pdb:2F8N|rcsb pdb:2FJ7|rcsb pdb:2NZD|rcsb pdb:3B6F|rcsb pdb:3B6G|rcsb pdb:3KUY|rcsb pdb:3KWQ|rcsb pdb:3KXB|rcsb pdb:3LEL|rcsb pdb:3LJA|rcsb pdb:3LZ0|rcsb pdb:3LZ1|rcsb pdb:3MGP|rcsb pdb:3MGQ|rcsb pdb:3MGR|rcsb pdb:3MGS|rcsb pdb:3MNN|rcsb pdb:3MVD|rcsb pdb:3O62|rcsb pdb:3REH|rcsb pdb:3REI|rcsb pdb:3REJ|rcsb pdb:3REK|rcsb pdb:3REL|rcsb pdb:3TU4|rcsb pdb:3UT9|rcsb pdb:3UTA|rcsb pdb:3UTB|rcsb pdb:4J8U|rcsb pdb:4J8V|rcsb pdb:4J8W|rcsb pdb:4J8X|rcsb pdb:4KGC|rcsb pdb:4KHA|rcsb pdb:4LD9|rcsb pdb:4R8P|rcsb pdb:4WU8|rcsb pdb:4WU9|rcsb pdb:4XUJ|rcsb pdb:6PWV|rcsb pdb:6PWW|rcsb pdb:6PWX|rcsb pdb:6PX1|rcsb pdb:6PX3|rcsb pdb:6R1T|rcsb pdb:6R1U|rcsb pdb:6R25|rcsb pdb:6RYR|rcsb pdb:6RYU|rcsb pdb:6S01|rcsb pdb:6T9L|rcsb pdb:6TDA|rcsb pdb:6TEM|rcsb pdb:6UGM|rcsb pdb:6UH5|rcsb pdb:6UXW|rcsb pdb:6VEN|rcsb pdb:6VYP|rcsb pdb:6W4L|rcsb pdb:6W5I|rcsb pdb:6W5M|rcsb pdb:6W5N|rcsb pdb:6WKR|rcsb pdb:6WZ5|rcsb pdb:6WZ9|rcsb pdb:6X0N|rcsb pdb:6ZHX|rcsb pdb:6ZHY|rcsb pdb:7AT8|rcsb pdb:7CRO|rcsb pdb:7CRP|rcsb pdb:7CRQ|rcsb pdb:6PA7|rcsb pdb:7CRR|rcsb pdb:7E8I|rcsb pdb:7K6P|rcsb pdb:7K6Q|rcsb pdb:4Z66|rcsb pdb:4ZUX|rcsb pdb:5CP6|rcsb pdb:5DNM|rcsb pdb:5DNN|rcsb pdb:5E5A|rcsb pdb:5F99|rcsb pdb:5G2E|rcsb pdb:5HQ2|rcsb pdb:5NL0|rcsb pdb:5O9G|rcsb pdb:5OMX|rcsb pdb:5ONG|rcsb pdb:5ONW|rcsb pdb:5OXV|rcsb pdb:5OY7|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5XF6|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6ESF|rcsb pdb:6ESG|rcsb pdb:6ESH|rcsb pdb:6ESI|rcsb pdb:6FQ5|rcsb pdb:6FQ6|rcsb pdb:6FQ8|rcsb pdb:6I84|rcsb pdb:6IRO|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6J99|rcsb pdb:6JM9|rcsb pdb:6JMA|rcsb pdb:6JYL|rcsb pdb:6K01|rcsb pdb:6K1P|rcsb pdb:6KIU|rcsb pdb:6KIV|rcsb pdb:6KIW|rcsb pdb:6KIX|rcsb pdb:4XZQ|rcsb pdb:6KIZ|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6LTJ|rcsb pdb:4YS3|rcsb pdb:6N1Z|rcsb pdb:6NJ9|rcsb pdb:6NN6|rcsb pdb:6NOG|rcsb pdb:6NQA|rcsb pdb:6NZO|rcsb pdb:6O96|rcsb pdb:6OM3|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR000558(Histone H2B)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1AOI|rcsb pdb:1F66|rcsb pdb:1KX3|rcsb pdb:1KX4|rcsb pdb:1KX5|rcsb pdb:1M18|rcsb pdb:1M19|rcsb pdb:1M1A|rcsb pdb:1P34|rcsb pdb:1P3A|rcsb pdb:1P3B|rcsb pdb:1P3F|rcsb pdb:1P3G|rcsb pdb:1P3I|rcsb pdb:1P3K|rcsb pdb:1P3L|rcsb pdb:1P3M|rcsb pdb:1P3O|rcsb pdb:1P3P|rcsb pdb:1S32|rcsb pdb:1ZBB - crc64:78BDB74C7FEC6BE5 - figure legend:Extended Data Figure 1a, Supplementary Fig. 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2018/08/16 2018/10/02 rogid:zDUUFnQQP3ZHhvQlcAMRjGIFWVg559292 rogid:+nkA0I7sW2isaEdOjTHa7+jcsDw8355 rigid:mu3Xh4FRiiv5iphHBn9+LxYK8Yk false - - - - psi-mi:"MI:0396"(predetermined participant)|psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0396"(predetermined participant)|psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P32657 uniprotkb:P84233 intact:EBI-4574|uniprotkb:D3DM72|ensemblfungi:YER164W intact:EBI-350041|uniprotkb:P02295|uniprotkb:P02297|uniprotkb:P16105|uniprotkb:P17269|uniprotkb:A4FVE2|uniprotkb:P17320 psi-mi:chd1_yeast(display_long)|uniprotkb:CHD1(gene name)|psi-mi:CHD1(display_short)|uniprotkb:YER164W(locus name)|uniprotkb:SYGP-ORF4(orf name)|uniprotkb:ATP-dependent helicase CHD1(gene name synonym) psi-mi:h32_xenla(display_long) psi-mi:"MI:0071"(molecular sieving) Farnung et al. (2017) pubmed:29019976|imex:IM-26861 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-20768633|imex:IM-26861-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-6362N|refseq:NP_011091.1|sgd:S000000966|mint:P32657|ensemblfungi:YER164W(gene)|ensemblfungi:YER164W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000182"(rDNA binding)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001178"(regulation of transcriptional start site selection at RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0034728"(nucleosome organization)|go:"GO:0035064"(methylated histone binding)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0060303"(regulation of nucleosome density)|go:"GO:0070615"|go:"GO:0071441"(negative regulation of histone H3-K14 acetylation)|go:"GO:0071894"(histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:1900050"(negative regulation of histone exchange)|go:"GO:1902275"(regulation of chromatin organization)|go:"GO:2000104"(negative regulation of DNA-dependent DNA replication)|go:"GO:2000616"(negative regulation of histone H3-K9 acetylation)|interpro:IPR000330(SNF2-related)|interpro:IPR000953(Chromo domain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR009057(Homeodomain-like)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR016197(Chromo domain-like)|interpro:IPR023779|interpro:IPR023780|interpro:IPR025260|interpro:IPR027417|interpro:IPR038718|interpro:IPR041150|rcsb pdb:2DY7|rcsb pdb:2DY8|rcsb pdb:2H1E|rcsb pdb:2XB0|rcsb pdb:3MWY|rcsb pdb:3TED|rcsb pdb:5J70|rcsb pdb:5O9G|rcsb pdb:6FTX|rcsb pdb:6G0L refseq:NP_001091428.1|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:5DNM|rcsb pdb:5DNN|rcsb pdb:5E5A|rcsb pdb:5F99|rcsb pdb:5HQ2|rcsb pdb:5KGF|rcsb pdb:5MLU|rcsb pdb:5NL0|rcsb pdb:5O9G|rcsb pdb:5OMX|rcsb pdb:5ONG|rcsb pdb:5ONW|rcsb pdb:5OXV|rcsb pdb:5OY7|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5XBK|rcsb pdb:5XF6|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6ESF|rcsb pdb:6ESG|rcsb pdb:6ESH|rcsb pdb:6ESI|rcsb pdb:6FQ5|rcsb pdb:6FQ6|rcsb pdb:6I84|rcsb pdb:6IRO|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6JM9|rcsb pdb:6JMA|rcsb pdb:6KIU|rcsb pdb:6KIV|rcsb pdb:6KIW|rcsb pdb:6KIX|rcsb pdb:6KIZ|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6NE3|rcsb pdb:6NJ9|rcsb pdb:6NN6|rcsb pdb:6NOG|rcsb pdb:6NQA|rcsb pdb:6O22|rcsb pdb:6O96|rcsb pdb:6OM3|rcsb pdb:6PA7|rcsb pdb:6PWV|rcsb pdb:6PWW|rcsb pdb:6PWX|rcsb pdb:6R1T|rcsb pdb:6R1U|rcsb pdb:6R25|rcsb pdb:6RYR|rcsb pdb:6RYU|rcsb pdb:6S01|rcsb pdb:6T9L|rcsb pdb:6TDA|rcsb pdb:6UH5|rcsb pdb:6UXW|rcsb pdb:6VEN|rcsb pdb:6VYP|rcsb pdb:6W5I|rcsb pdb:6W5M|rcsb pdb:6W5N|rcsb pdb:6WKR|rcsb pdb:6WZ5|rcsb pdb:6WZ9|rcsb pdb:6X0N|rcsb pdb:6Z6P|rcsb pdb:7AT8|rcsb pdb:7K6P|rcsb pdb:7K6Q|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1F66|rcsb pdb:1KX3|rcsb pdb:1KX4|rcsb pdb:1KX5|rcsb pdb:1P34|rcsb pdb:1P3A|rcsb pdb:1P3B|rcsb pdb:1P3F|rcsb pdb:1P3G|rcsb pdb:1P3I|rcsb pdb:1P3K|rcsb pdb:1P3L|rcsb pdb:1P3M|rcsb pdb:1P3O|rcsb pdb:1P3P|rcsb pdb:1S32|rcsb pdb:1ZBB|rcsb pdb:1ZLA|rcsb pdb:2F8N|rcsb pdb:2FJ7|rcsb pdb:2HUE|rcsb pdb:2IO5|rcsb pdb:2L11|rcsb pdb:2L12|rcsb pdb:2NZD|rcsb pdb:3B6F|rcsb pdb:3B6G|rcsb pdb:3C1B|rcsb pdb:3C1C|rcsb pdb:3GV6|rcsb pdb:3KUY|rcsb pdb:3KWQ|rcsb pdb:4ZUX|rcsb pdb:3KXB|rcsb pdb:3LEL|rcsb pdb:3LJA|rcsb pdb:3LZ0|rcsb pdb:5BS7|rcsb pdb:3LZ1|rcsb pdb:3MGP|rcsb pdb:5BSA|rcsb pdb:3MGQ|rcsb pdb:3MGR|rcsb pdb:5CP6|rcsb pdb:3MGS|rcsb pdb:3MNN|rcsb pdb:3MVD|rcsb pdb:3O62|rcsb pdb:3REH|rcsb pdb:3REI|rcsb pdb:3REJ|rcsb pdb:3REK|rcsb pdb:3REL|rcsb pdb:3TU4|rcsb pdb:3UT9|rcsb pdb:3UTA|rcsb pdb:3UTB|rcsb pdb:4EO5|rcsb pdb:4J8U|rcsb pdb:4J8V|rcsb pdb:4J8W|rcsb pdb:4J8X|rcsb pdb:4KGC|rcsb pdb:4LD9|rcsb pdb:4QEO|rcsb pdb:4R8P|rcsb pdb:4WU8|rcsb pdb:4WU9|rcsb pdb:4XUJ|rcsb pdb:4XZQ|rcsb pdb:4YS3|rcsb pdb:4Z66|refseq:XP_018079657.1|refseq:XP_018096294.1|refseq:XP_018096295.1|refseq:XP_018096296.1|refseq:XP_018098036.1|refseq:XP_018118226.1|refseq:XP_018118227.1|dip:DIP-37430N - crc64:78BDB74C7FEC6BE5 - figure legend:Extended Data Figure 1a, Supplementary Fig. 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2018/08/16 2018/10/02 rogid:zDUUFnQQP3ZHhvQlcAMRjGIFWVg559292 rogid:2TuVqWkeAnhHR4nrl0GNyUj1N3o8355 rigid:mu3Xh4FRiiv5iphHBn9+LxYK8Yk false - - - - psi-mi:"MI:0396"(predetermined participant)|psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0396"(predetermined participant)|psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P32657 uniprotkb:P62799 intact:EBI-4574|uniprotkb:D3DM72|ensemblfungi:YER164W intact:EBI-302085|uniprotkb:P02304|uniprotkb:P02305|uniprotkb:Q6AZG5 psi-mi:chd1_yeast(display_long)|uniprotkb:CHD1(gene name)|psi-mi:CHD1(display_short)|uniprotkb:YER164W(locus name)|uniprotkb:SYGP-ORF4(orf name)|uniprotkb:ATP-dependent helicase CHD1(gene name synonym) psi-mi:h4_xenla(display_long) psi-mi:"MI:0071"(molecular sieving) Farnung et al. (2017) pubmed:29019976|imex:IM-26861 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-20768633|imex:IM-26861-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-6362N|refseq:NP_011091.1|sgd:S000000966|mint:P32657|ensemblfungi:YER164W(gene)|ensemblfungi:YER164W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000182"(rDNA binding)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001178"(regulation of transcriptional start site selection at RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0034728"(nucleosome organization)|go:"GO:0035064"(methylated histone binding)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0060303"(regulation of nucleosome density)|go:"GO:0070615"|go:"GO:0071441"(negative regulation of histone H3-K14 acetylation)|go:"GO:0071894"(histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:1900050"(negative regulation of histone exchange)|go:"GO:1902275"(regulation of chromatin organization)|go:"GO:2000104"(negative regulation of DNA-dependent DNA replication)|go:"GO:2000616"(negative regulation of histone H3-K9 acetylation)|interpro:IPR000330(SNF2-related)|interpro:IPR000953(Chromo domain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR009057(Homeodomain-like)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR016197(Chromo domain-like)|interpro:IPR023779|interpro:IPR023780|interpro:IPR025260|interpro:IPR027417|interpro:IPR038718|interpro:IPR041150|rcsb pdb:2DY7|rcsb pdb:2DY8|rcsb pdb:2H1E|rcsb pdb:2XB0|rcsb pdb:3MWY|rcsb pdb:3TED|rcsb pdb:5J70|rcsb pdb:5O9G|rcsb pdb:6FTX|rcsb pdb:6G0L go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006352"(DNA-templated transcription, initiation)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR001951(Histone H4)|interpro:IPR004823("TATA box binding protein associated factor (TAF)")|interpro:IPR009072(Histone-fold)|interpro:IPR019809|interpro:IPR035425|rcsb pdb:1AOI|rcsb pdb:1KX3|rcsb pdb:1KX4|rcsb pdb:1KX5|rcsb pdb:1M18|rcsb pdb:1M19|rcsb pdb:1M1A|rcsb pdb:1P34|rcsb pdb:1P3A|rcsb pdb:1P3B|rcsb pdb:1P3F|rcsb pdb:1P3G|rcsb pdb:1P3I|rcsb pdb:1P3K|rcsb pdb:1P3L|rcsb pdb:1P3M|rcsb pdb:1P3O|rcsb pdb:1P3P|rcsb pdb:1S32|rcsb pdb:5BSA|rcsb pdb:5CP6|rcsb pdb:5DNM|rcsb pdb:5DNN|rcsb pdb:5E5A|rcsb pdb:5F99|rcsb pdb:5HQ2|rcsb pdb:5KGF|rcsb pdb:5MLU|rcsb pdb:5NL0|rcsb pdb:5O9G|rcsb pdb:5OMX|rcsb pdb:5ONG|rcsb pdb:5ONW|rcsb pdb:5OXV|rcsb pdb:5OY7|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5XF6|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6ESF|rcsb pdb:6ESG|rcsb pdb:6ESH|rcsb pdb:6ESI|rcsb pdb:6FQ5|rcsb pdb:6FQ6|rcsb pdb:1ZBB|rcsb pdb:1ZLA|rcsb pdb:2F8N|rcsb pdb:2FJ7|rcsb pdb:2HUE|rcsb pdb:2IO5|rcsb pdb:2NZD|rcsb pdb:3B6F|rcsb pdb:3B6G|rcsb pdb:3C1B|rcsb pdb:3C1C|rcsb pdb:3KUY|rcsb pdb:3KWQ|rcsb pdb:3KXB|rcsb pdb:3LEL|rcsb pdb:3LJA|rcsb pdb:3LZ0|rcsb pdb:3LZ1|rcsb pdb:3MGP|rcsb pdb:3MGQ|rcsb pdb:3MGR|rcsb pdb:3MGS|rcsb pdb:3MNN|rcsb pdb:3MVD|rcsb pdb:3O62|rcsb pdb:3REH|rcsb pdb:3REI|rcsb pdb:3REJ|rcsb pdb:3REK|rcsb pdb:3REL|rcsb pdb:3TU4|rcsb pdb:3UT9|rcsb pdb:3UTA|rcsb pdb:3UTB|rcsb pdb:4EO5|rcsb pdb:4J8U|rcsb pdb:4J8V|rcsb pdb:4J8W|rcsb pdb:4J8X|rcsb pdb:4KGC|rcsb pdb:4LD9|rcsb pdb:4R8P|rcsb pdb:4WU8|rcsb pdb:4WU9|rcsb pdb:4XUJ|rcsb pdb:4XZQ|rcsb pdb:4YS3|rcsb pdb:4Z66|rcsb pdb:4ZBJ|rcsb pdb:4ZUX|rcsb pdb:5BS7|rcsb pdb:6FQ8|rcsb pdb:6PWW|rcsb pdb:6FTX|rcsb pdb:6G0L|rcsb pdb:6GYT|rcsb pdb:6I84|rcsb pdb:6IRO|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6J99|rcsb pdb:6JM9|rcsb pdb:6JMA|rcsb pdb:6JYL|rcsb pdb:6K1P|rcsb pdb:6KIU|rcsb pdb:6KIV|rcsb pdb:6KIW|rcsb pdb:6KIX|rcsb pdb:6KIZ|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6LTJ|rcsb pdb:6NE3|rcsb pdb:6NJ9|rcsb pdb:6NN6|rcsb pdb:6NOG|rcsb pdb:6NQA|rcsb pdb:6NZO|rcsb pdb:6O22|rcsb pdb:6O96|rcsb pdb:6OM3|rcsb pdb:6PA7|rcsb pdb:6PWV|refseq:NP_001087926.1|rcsb pdb:6W5M|rcsb pdb:6W5N|rcsb pdb:6WKR|rcsb pdb:6WZ5|rcsb pdb:6WZ9|rcsb pdb:6X0N|rcsb pdb:6ZHX|rcsb pdb:6ZHY|rcsb pdb:7AT8|rcsb pdb:7CRO|rcsb pdb:7CRP|rcsb pdb:7CRQ|rcsb pdb:7CRR|rcsb pdb:7E8I|rcsb pdb:7K6P|rcsb pdb:7K6Q|rcsb pdb:7KTQ|rcsb pdb:6PWX|rcsb pdb:6PX1|rcsb pdb:6PX3|rcsb pdb:6R1T|rcsb pdb:6R1U|rcsb pdb:6R25|rcsb pdb:6RYR|rcsb pdb:6RYU|rcsb pdb:6S01|rcsb pdb:6T9L|rcsb pdb:6TDA|rcsb pdb:6TEM|rcsb pdb:6UGM|rcsb pdb:6UH5|rcsb pdb:6UXW|rcsb pdb:6VEN|rcsb pdb:6VYP|rcsb pdb:6VZ4|rcsb pdb:6W5I|dip:DIP-37429N|refseq:XP_018095104.1|refseq:XP_018095605.1|refseq:XP_018095606.1|refseq:XP_018096302.1|refseq:XP_018097458.1|refseq:XP_018098137.1|refseq:XP_018118237.1|refseq:XP_018120359.1|refseq:XP_018120360.1 - crc64:78BDB74C7FEC6BE5 - figure legend:Extended Data Figure 1a, Supplementary Fig. 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2018/08/16 2018/10/02 rogid:zDUUFnQQP3ZHhvQlcAMRjGIFWVg559292 rogid:LZSfhrpw0PcDREEoJ1UMkBvnUfA8355 rigid:mu3Xh4FRiiv5iphHBn9+LxYK8Yk false - - - - psi-mi:"MI:0396"(predetermined participant)|psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0396"(predetermined participant)|psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P32657 uniprotkb:Q6AZJ8 intact:EBI-4574|uniprotkb:D3DM72|ensemblfungi:YER164W intact:EBI-1265425 psi-mi:chd1_yeast(display_long)|uniprotkb:CHD1(gene name)|psi-mi:CHD1(display_short)|uniprotkb:YER164W(locus name)|uniprotkb:SYGP-ORF4(orf name)|uniprotkb:ATP-dependent helicase CHD1(gene name synonym) psi-mi:q6azj8_xenla(display_long)|uniprotkb:h2ac14.L(gene name)|psi-mi:h2ac14.L(display_short)|uniprotkb:LOC494591(gene name synonym)|uniprotkb:h2ac14(gene name synonym)|uniprotkb:hist1h2aj(gene name synonym)|uniprotkb:XELAEV_18003602mg(orf name) psi-mi:"MI:0071"(molecular sieving) Farnung et al. (2017) pubmed:29019976|imex:IM-26861 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:8355(xenla)|taxid:8355("Xenopus laevis (African clawed frog)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-20768633|imex:IM-26861-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-6362N|refseq:NP_011091.1|sgd:S000000966|mint:P32657|ensemblfungi:YER164W(gene)|ensemblfungi:YER164W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000182"(rDNA binding)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001178"(regulation of transcriptional start site selection at RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0034728"(nucleosome organization)|go:"GO:0035064"(methylated histone binding)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0060303"(regulation of nucleosome density)|go:"GO:0070615"|go:"GO:0071441"(negative regulation of histone H3-K14 acetylation)|go:"GO:0071894"(histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:1900050"(negative regulation of histone exchange)|go:"GO:1902275"(regulation of chromatin organization)|go:"GO:2000104"(negative regulation of DNA-dependent DNA replication)|go:"GO:2000616"(negative regulation of histone H3-K9 acetylation)|interpro:IPR000330(SNF2-related)|interpro:IPR000953(Chromo domain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR009057(Homeodomain-like)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR016197(Chromo domain-like)|interpro:IPR023779|interpro:IPR023780|interpro:IPR025260|interpro:IPR027417|interpro:IPR038718|interpro:IPR041150|rcsb pdb:2DY7|rcsb pdb:2DY8|rcsb pdb:2H1E|rcsb pdb:2XB0|rcsb pdb:3MWY|rcsb pdb:3TED|rcsb pdb:5J70|rcsb pdb:5O9G|rcsb pdb:6FTX|rcsb pdb:6G0L refseq:NP_001087948.1|dip:DIP-38576N|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR002119(Histone H2A)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|interpro:IPR032454|interpro:IPR032458|rcsb pdb:3KXB|rcsb pdb:3LEL|rcsb pdb:3LZ0|rcsb pdb:3LZ1|rcsb pdb:3MGP|rcsb pdb:3MGQ|rcsb pdb:3MGR|rcsb pdb:3MGS|rcsb pdb:3MVD|rcsb pdb:4KGC|rcsb pdb:4KHA|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6ESF|rcsb pdb:6ESG|rcsb pdb:6ESH|rcsb pdb:6ESI|rcsb pdb:6J99|rcsb pdb:6JM9|rcsb pdb:6JMA|rcsb pdb:6JYL|rcsb pdb:6K01|rcsb pdb:6K1P|rcsb pdb:6UGM|rcsb pdb:6UH5|rcsb pdb:6VZ4|rcsb pdb:6W5I|rcsb pdb:6Z6P|rcsb pdb:7AT8|rcsb pdb:7KTQ - crc64:78BDB74C7FEC6BE5 - figure legend:Extended Data Figure 1a, Supplementary Fig. 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2018/08/16 2018/10/02 rogid:zDUUFnQQP3ZHhvQlcAMRjGIFWVg559292 rogid:E7iU5tlv8Az4uOlSHgPXi/4WcnE8355 rigid:mu3Xh4FRiiv5iphHBn9+LxYK8Yk false - - - 2 psi-mi:"MI:0396"(predetermined participant)|psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0396"(predetermined participant)|psi-mi:"MI:0427"(Identification by mass spectrometry)