#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:Q96Q05	uniprotkb:Q9CQP2	intact:EBI-6160596|uniprotkb:Q4VTT3|uniprotkb:Q658K7|uniprotkb:Q6P149|uniprotkb:Q6ZQT3|uniprotkb:Q7L5C4|uniprotkb:Q86Y21|uniprotkb:Q96SL2|uniprotkb:Q9BQA2|ensembl:ENSP00000405060|ensembl:ENSP00000498020	intact:EBI-1172267|uniprotkb:Q8BP61|uniprotkb:Q9CQF5|uniprotkb:Q9D0V3|uniprotkb:Q9DCM3|ensembl:ENSMUSP00000107813|ensembl:ENSMUSP00000112195	psi-mi:tppc9_human(display_long)|uniprotkb:TRAPPC9(gene name)|psi-mi:TRAPPC9(display_short)|uniprotkb:KIAA1882(gene name synonym)|uniprotkb:NIBP(gene name synonym)|uniprotkb:NIK- and IKBKB-binding protein(gene name synonym)|uniprotkb:Tularik gene 1 protein(gene name synonym)|uniprotkb:T1(orf name)	psi-mi:tppc2_mouse(display_long)|uniprotkb:Trappc2(gene name)|psi-mi:Trappc2(display_short)|uniprotkb:Sedl(gene name synonym)|uniprotkb:Sedlin(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Zong et al. (2010)	pubmed:21858081|imex:IM-26450	taxid:9606(human)|taxid:9606(Homo sapiens)	taxid:10090(mouse)|taxid:10090(Mus musculus)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-20591376|imex:IM-26450-1	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_001308575.1|refseq:NP_001153844.1|refseq:NP_113654.4|ensembl:ENSG00000167632(gene)|ensembl:ENST00000438773(transcript)|ensembl:ENST00000648948(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030008"(TRAPP complex)|go:"GO:0030182"(neuron differentiation)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|interpro:IPR013935(Transport protein Trs120)|mint:Q96Q05|reactome:R-HSA-204005|reactome:R-HSA-8876198|refseq:nm_001160372(identity)	refseq:NP_079595.1|refseq:NP_079708.2|refseq:NP_001300651.1|ensembl:ENSMUSG00000079317(gene)|ensembl:ENSMUST00000112194(transcript)|ensembl:ENSMUST00000116495(transcript)|go:"GO:0001501"(skeletal system development)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0008134"(transcription factor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR006722(Sedlin)|interpro:IPR011012(Longin-like)|rcsb pdb:1H3Q|rcsb pdb:2J3W|reactome:R-MMU-204005|reactome:R-MMU-8876198|go:"GO:0030008"(TRAPP complex)|refseq:XP_006533980.1|refseq:XP_006533981.1|refseq:XP_006533982.1	-	-	-	figure legend:Fig.1B, Fig.4A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:9534(chlae-cos)|taxid:9534(Chlorocebus aethiops)	-	2018/06/15	2018/06/15	rogid:LmmBavWplLRKY/Q932T4UijaHRs9606	rogid:GLh71F+osh+lZK15VjEPYhsPIfs10090	rigid:H8ZQ6QMEP9Vjl6Mvi9F/EKsw3BM	false	sufficient binding region:205-1148|green fluorescent protein tag:?-?	myc tag:?-?|mutation decreasing interaction strength:47-47	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q96Q05	uniprotkb:Q9CQP2	intact:EBI-6160596|uniprotkb:Q4VTT3|uniprotkb:Q658K7|uniprotkb:Q6P149|uniprotkb:Q6ZQT3|uniprotkb:Q7L5C4|uniprotkb:Q86Y21|uniprotkb:Q96SL2|uniprotkb:Q9BQA2|ensembl:ENSP00000405060|ensembl:ENSP00000498020	intact:EBI-1172267|uniprotkb:Q8BP61|uniprotkb:Q9CQF5|uniprotkb:Q9D0V3|uniprotkb:Q9DCM3|ensembl:ENSMUSP00000107813|ensembl:ENSMUSP00000112195	psi-mi:tppc9_human(display_long)|uniprotkb:TRAPPC9(gene name)|psi-mi:TRAPPC9(display_short)|uniprotkb:KIAA1882(gene name synonym)|uniprotkb:NIBP(gene name synonym)|uniprotkb:NIK- and IKBKB-binding protein(gene name synonym)|uniprotkb:Tularik gene 1 protein(gene name synonym)|uniprotkb:T1(orf name)	psi-mi:tppc2_mouse(display_long)|uniprotkb:Trappc2(gene name)|psi-mi:Trappc2(display_short)|uniprotkb:Sedl(gene name synonym)|uniprotkb:Sedlin(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Zong et al. (2010)	pubmed:21858081|imex:IM-26450	taxid:9606(human)|taxid:9606(Homo sapiens)	taxid:10090(mouse)|taxid:10090(Mus musculus)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-20591453|imex:IM-26450-3	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_001308575.1|refseq:NP_001153844.1|refseq:NP_113654.4|ensembl:ENSG00000167632(gene)|ensembl:ENST00000438773(transcript)|ensembl:ENST00000648948(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030008"(TRAPP complex)|go:"GO:0030182"(neuron differentiation)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|interpro:IPR013935(Transport protein Trs120)|mint:Q96Q05|reactome:R-HSA-204005|reactome:R-HSA-8876198|refseq:nm_001160372(identity)	refseq:NP_079595.1|refseq:NP_079708.2|refseq:NP_001300651.1|ensembl:ENSMUSG00000079317(gene)|ensembl:ENSMUST00000112194(transcript)|ensembl:ENSMUST00000116495(transcript)|go:"GO:0001501"(skeletal system development)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0008134"(transcription factor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR006722(Sedlin)|interpro:IPR011012(Longin-like)|rcsb pdb:1H3Q|rcsb pdb:2J3W|reactome:R-MMU-204005|reactome:R-MMU-8876198|go:"GO:0030008"(TRAPP complex)|refseq:XP_006533980.1|refseq:XP_006533981.1|refseq:XP_006533982.1	-	-	-	figure legend:Fig.5A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:9534(chlae-cos)|taxid:9534(Chlorocebus aethiops)	-	2018/06/15	2018/06/15	rogid:LmmBavWplLRKY/Q932T4UijaHRs9606	rogid:GLh71F+osh+lZK15VjEPYhsPIfs10090	rigid:H8ZQ6QMEP9Vjl6Mvi9F/EKsw3BM	false	sufficient binding region:773-1148|green fluorescent protein tag:?-?	myc tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q96Q05	intact:EBI-20591397	intact:EBI-6160596|uniprotkb:Q4VTT3|uniprotkb:Q658K7|uniprotkb:Q6P149|uniprotkb:Q6ZQT3|uniprotkb:Q7L5C4|uniprotkb:Q86Y21|uniprotkb:Q96SL2|uniprotkb:Q9BQA2|ensembl:ENSP00000405060|ensembl:ENSP00000498020	-	psi-mi:tppc9_human(display_long)|uniprotkb:TRAPPC9(gene name)|psi-mi:TRAPPC9(display_short)|uniprotkb:KIAA1882(gene name synonym)|uniprotkb:NIBP(gene name synonym)|uniprotkb:NIK- and IKBKB-binding protein(gene name synonym)|uniprotkb:Tularik gene 1 protein(gene name synonym)|uniprotkb:T1(orf name)	psi-mi:trappc2_trappc2b_human(display_short)|psi-mi:EBI-20591397(display_long)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Zong et al. (2010)	pubmed:21858081|imex:IM-26450	taxid:9606(human)|taxid:9606(Homo sapiens)	taxid:9606(human)|taxid:9606(Homo sapiens)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-20591393|imex:IM-26450-4	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:1304"(molecule set)	refseq:NP_001308575.1|refseq:NP_001153844.1|refseq:NP_113654.4|ensembl:ENSG00000167632(gene)|ensembl:ENST00000438773(transcript)|ensembl:ENST00000648948(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030008"(TRAPP complex)|go:"GO:0030182"(neuron differentiation)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|interpro:IPR013935(Transport protein Trs120)|mint:Q96Q05|reactome:R-HSA-204005|reactome:R-HSA-8876198	-	-	-	comment:P0DI81,P0DI82	figure legend:Fig.3|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:9606(human-293)|taxid:9606(Homo sapiens transformed primary embryonal kidney cells)	-	2018/06/15	2018/06/15	rogid:LmmBavWplLRKY/Q932T4UijaHRs9606	-	-	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q96Q05	uniprotkb:Q9Y2L5	intact:EBI-6160596|uniprotkb:Q4VTT3|uniprotkb:Q658K7|uniprotkb:Q6P149|uniprotkb:Q6ZQT3|uniprotkb:Q7L5C4|uniprotkb:Q86Y21|uniprotkb:Q96SL2|uniprotkb:Q9BQA2|ensembl:ENSP00000405060|ensembl:ENSP00000498020	intact:EBI-2820056|uniprotkb:A0JP15|uniprotkb:B3KME5|uniprotkb:Q9H0L2|ensembl:ENSP00000283351	psi-mi:tppc9_human(display_long)|uniprotkb:TRAPPC9(gene name)|psi-mi:TRAPPC9(display_short)|uniprotkb:KIAA1882(gene name synonym)|uniprotkb:NIBP(gene name synonym)|uniprotkb:NIK- and IKBKB-binding protein(gene name synonym)|uniprotkb:Tularik gene 1 protein(gene name synonym)|uniprotkb:T1(orf name)	psi-mi:tppc8_human(display_long)|uniprotkb:TRAPPC8(gene name)|psi-mi:TRAPPC8(display_short)|uniprotkb:KIAA1012(gene name synonym)|uniprotkb:Protein TRS85 homolog(gene name synonym)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Zong et al. (2010)	pubmed:21858081|imex:IM-26450	taxid:9606(human)|taxid:9606(Homo sapiens)	taxid:9606(human)|taxid:9606(Homo sapiens)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-20591393|imex:IM-26450-4	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_001308575.1|refseq:NP_001153844.1|refseq:NP_113654.4|ensembl:ENSG00000167632(gene)|ensembl:ENST00000438773(transcript)|ensembl:ENST00000648948(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030008"(TRAPP complex)|go:"GO:0030182"(neuron differentiation)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|interpro:IPR013935(Transport protein Trs120)|mint:Q96Q05|reactome:R-HSA-204005|reactome:R-HSA-8876198	refseq:NP_055754.2|dip:DIP-48280N|ensembl:ENSG00000153339(gene)|ensembl:ENST00000283351(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005829"(cytosol)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007030"(Golgi organization)|go:"GO:0030008"(TRAPP complex)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:1990072"(TRAPPIII protein complex)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR024420|mint:Q9Y2L5|reactome:R-HSA-8876198	-	-	-	figure legend:Fig.3|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:9606(human-293)|taxid:9606(Homo sapiens transformed primary embryonal kidney cells)	-	2018/06/15	2018/06/15	rogid:LmmBavWplLRKY/Q932T4UijaHRs9606	rogid:ofBTdvGAgN6zCUIydAmlZ0BpGsw9606	-	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)