#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P20448 uniprotkb:P43639 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687688|imex:IM-25795-141 author score:0.6 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - - crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:8f42Q1fbj/AA3rV07RqqvoLckXY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53941 uniprotkb:P43639 intact:EBI-9243|ensemblfungi:YNL075W|uniprotkb:D6W1A4 intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:imp4_yeast(display_long)|uniprotkb:IMP4(gene name)|psi-mi:IMP4(display_short)|uniprotkb:YNL075W(locus name)|uniprotkb:N2353(orf name)|uniprotkb:Interacting with MPP10 protein 4(gene name synonym) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687700|imex:IM-25795-143 author score:0.6 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YNL075W(gene)|ensemblfungi:YNL075W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|sgd:S000005019|refseq:NP_014324.3|reactome:R-SCE-6791226|dip:DIP-4362N|ensembl:YNL075W(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - - crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vbv+Sx/noAJOmIh7OYonw2J9ckI559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:HNVrSEwiRBiaULpZ79Tux/dFKJ4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25368 uniprotkb:P43639 intact:EBI-16019|uniprotkb:D6VQY4|ensemblfungi:YCL031C intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:rrp7_yeast(display_long)|uniprotkb:RRP7(gene name)|psi-mi:RRP7(display_short)|uniprotkb:YCL184(orf name)|uniprotkb:YCL31C(orf name)|uniprotkb:YCL031C(locus name) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687712|imex:IM-25795-145 author score:0.6 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009899.1|sgd:S000000536|interpro:IPR040446|interpro:IPR040447|rcsb pdb:2MBY|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YCL031C(gene)|ensemblfungi:YCL031C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR024326|dip:DIP-4974N|mint:P25368|ensembl:YCL031C(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:768F43B0057788F2 crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:fovz4jwoSdxp4Yh7KCDYpv3f0mc559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:RFa7y1sX6uZpE6FqgwOHEpNLya4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06512 uniprotkb:P43639 intact:EBI-36459|uniprotkb:D6W4E1|ensemblfungi:YPR144C intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:noc4_yeast(display_long)|uniprotkb:NOC4(gene name)|psi-mi:NOC4(display_short)|uniprotkb:UTP19(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 19(gene name synonym)|uniprotkb:U three protein 19(gene name synonym)|uniprotkb:YPR144C(locus name) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687724|imex:IM-25795-461 author score:0.6 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015470.1|sgd:S000006348|mint:Q06512|dip:DIP-4555N|ensemblfungi:YPR144C(gene)|ensemblfungi:YPR144C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR005612(CBF)|interpro:IPR027193|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPR144C(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - - crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:M+Te42uFKtlIFUYnsmPmKzkSCZw559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:fD6OBR+G2zDO4ZgI3EDOZDtla9c false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P38333 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687736|imex:IM-25795-463 author score:0.6 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - crc64:9278BF873834FC7E crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:ViSHLRNFJ+6R+wsWnjEY0OJjacM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P34247 uniprotkb:P19454 intact:EBI-20162|uniprotkb:D6VXI8|ensemblfungi:YKL099C intact:EBI-9548|ensemblfungi:YOR061W|uniprotkb:D6W2C4 psi-mi:utp11_yeast(display_long)|uniprotkb:UTP11(gene name)|psi-mi:UTP11(display_short)|uniprotkb:YKL099C(locus name)|uniprotkb:YKL449(orf name)|uniprotkb:U three protein 11(gene name synonym) psi-mi:csk22_yeast(display_long)|uniprotkb:CKA2(gene name)|psi-mi:CKA2(display_short)|uniprotkb:YOR29-12(orf name)|uniprotkb:YOR061W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687940|imex:IM-25795-369 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012823.2|sgd:S000001582|reactome:R-SCE-6791226|ensemblfungi:YKL099C(gene)|ensemblfungi:YKL099C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0006364"(rRNA processing)|go:"GO:0006412"(translation)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007144(Small-subunit processome, Utp11)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|dip:DIP-6569N|ensembl:YKL099C(identity) ensemblfungi:YOR061W(gene)|ensemblfungi:YOR061W_mRNA(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0071470"(cellular response to osmotic stress)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|refseq:NP_014704.1|sgd:S000005587|mint:P19454|dip:DIP-1038N|ensembl:YOR061W(identity) - crc64:AA013651708C4DB6 crc64:30E214BD852824D0 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vMwGUuqsRuE9MZMert1+O6QTWak559292 rogid:E39eioYivVEqVSUhL99a2iGvisg559292 rigid:+lzf1Go2AK2qv6a+1v/u7d1n4L0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P19454 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-9548|ensemblfungi:YOR061W|uniprotkb:D6W2C4 psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:csk22_yeast(display_long)|uniprotkb:CKA2(gene name)|psi-mi:CKA2(display_short)|uniprotkb:YOR29-12(orf name)|uniprotkb:YOR061W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687928|imex:IM-25795-563 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) ensemblfungi:YOR061W(gene)|ensemblfungi:YOR061W_mRNA(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0071470"(cellular response to osmotic stress)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|refseq:NP_014704.1|sgd:S000005587|mint:P19454|dip:DIP-1038N|ensembl:YOR061W(identity) - crc64:AAFA78B5F6215D89 crc64:30E214BD852824D0 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:E39eioYivVEqVSUhL99a2iGvisg559292 rigid:0zaPodSYp/89xjwrCxR8z6w9k3g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P19454 uniprotkb:P19454 intact:EBI-9548|ensemblfungi:YOR061W|uniprotkb:D6W2C4 intact:EBI-9548|ensemblfungi:YOR061W|uniprotkb:D6W2C4 psi-mi:csk22_yeast(display_long)|uniprotkb:CKA2(gene name)|psi-mi:CKA2(display_short)|uniprotkb:YOR29-12(orf name)|uniprotkb:YOR061W(locus name) psi-mi:csk22_yeast(display_long)|uniprotkb:CKA2(gene name)|psi-mi:CKA2(display_short)|uniprotkb:YOR29-12(orf name)|uniprotkb:YOR061W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687916|imex:IM-25795-367 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YOR061W(gene)|ensemblfungi:YOR061W_mRNA(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0071470"(cellular response to osmotic stress)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|refseq:NP_014704.1|sgd:S000005587|mint:P19454|dip:DIP-1038N|ensembl:YOR061W(identity) ensemblfungi:YOR061W(gene)|ensemblfungi:YOR061W_mRNA(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0071470"(cellular response to osmotic stress)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|refseq:NP_014704.1|sgd:S000005587|mint:P19454|dip:DIP-1038N|ensembl:YOR061W(identity) - crc64:30E214BD852824D0 crc64:30E214BD852824D0 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:E39eioYivVEqVSUhL99a2iGvisg559292 rogid:E39eioYivVEqVSUhL99a2iGvisg559292 rigid:OWBXpRt62sMp4zU3SNQnCgKiaTc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40362 uniprotkb:P15790 intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687904|imex:IM-25795-163 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:0FEBD4540CF039DA crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:/3UyBAFJccTi1xIiu5XL0ZdxT4k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06132 uniprotkb:P15790 intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687892|imex:IM-25795-263 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:8EEFDB8258407FF3 crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:Av9O/0CAPLaslBDzv0rUv6umP/E false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P15790 uniprotkb:P15790 intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687880|imex:IM-25795-161 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:6A1A7F1BF47250C9 crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:BjR/ouKpZMlBF3qNaPkToW2VAOg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04177 uniprotkb:Q12339 intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W intact:EBI-30231|uniprotkb:D6W270|ensemblfungi:YOR004W psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:utp23_yeast(display_long)|uniprotkb:U3 small nucleolar RNA-associated protein 23(gene name synonym)|uniprotkb:U three protein 23(gene name synonym)|uniprotkb:UTP23(gene name)|psi-mi:UTP23(display_short)|uniprotkb:YOR004W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687868|imex:IM-25795-261 author score:0.61 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) refseq:NP_014646.1|sgd:S000005530|dip:DIP-4352N|mint:Q12339|ensemblfungi:YOR004W(gene)|ensemblfungi:YOR004W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0032040"(small-subunit processome)|go:"GO:0070181"(small ribosomal subunit rRNA binding)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|rcsb pdb:4MJ7|ensembl:YOR004W(identity) - crc64:7A6F60C7C6F46C2A crc64:27D00C72F6B492F6 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rogid:OvURSlkfCuWUay/vbYqayjai9/A559292 rigid:eix/HhoPjeER1VgWKzPL3H8lbtY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q99207 uniprotkb:Q99207 intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687856|imex:IM-25795-5 author score:0.61 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - crc64:F7615D96B02E15DE crc64:F7615D96B02E15DE figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:klCFbxsN8J2hd6VzI/uE3V5Z0aI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:P36009 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687844|imex:IM-25795-365 author score:0.61 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - crc64:7A7F964E2C7FD056 crc64:AAFA78B5F6215D89 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:5tV+7RPm/VmWcB6P8jCGLZGqQh8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40362 uniprotkb:P20448 intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687832|imex:IM-25795-241 author score:0.61 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) - crc64:0FEBD4540CF039DA - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rigid:12EpKalRAO1dc4X38ReZx7JlGmw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q99207 uniprotkb:P40362 intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687820|imex:IM-25795-363 author score:0.6 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:F7615D96B02E15DE crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:9nj3rbBF4uT6umcDt26YC/0edOA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:P40362 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687808|imex:IM-25795-149 author score:0.6 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - - crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:M7EfVuexP0SRSHqczlnJLkVTFhs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25368 uniprotkb:P40362 intact:EBI-16019|uniprotkb:D6VQY4|ensemblfungi:YCL031C intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:rrp7_yeast(display_long)|uniprotkb:RRP7(gene name)|psi-mi:RRP7(display_short)|uniprotkb:YCL184(orf name)|uniprotkb:YCL31C(orf name)|uniprotkb:YCL031C(locus name) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687796|imex:IM-25795-3 author score:0.6 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009899.1|sgd:S000000536|interpro:IPR040446|interpro:IPR040447|rcsb pdb:2MBY|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YCL031C(gene)|ensemblfungi:YCL031C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR024326|dip:DIP-4974N|mint:P25368|ensembl:YCL031C(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:768F43B0057788F2 crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:fovz4jwoSdxp4Yh7KCDYpv3f0mc559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:CIh823Cr5FSCpdBXGOxleauVelU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53317 uniprotkb:Q12481 intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687784|imex:IM-25795-1 author score:0.6 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rigid:mhrDH9i9qvEKjEJnXhvcNz7+WTY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53335 uniprotkb:P53866 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687772|imex:IM-25795-561 author score:0.6 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:D5AB6EB2C129922D - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:xt0YODwjetiDrF3SA963yXhU3Tw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53335 uniprotkb:P27476 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C intact:EBI-12274|ensemblfungi:YGR159C|uniprotkb:D6VUT9 psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:nsr1_yeast(display_long)|uniprotkb:NSR1(gene name)|psi-mi:NSR1(display_short)|uniprotkb:YGR159C(locus name)|uniprotkb:G7001(orf name)|uniprotkb:p67(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687760|imex:IM-25795-361 author score:0.6 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) ensemblfungi:YGR159C(gene)|ensemblfungi:YGR159C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034276|interpro:IPR035979|interpro:IPR034272|refseq:NP_011675.1|sgd:S000003391|mint:P27476|dip:DIP-5537N|ensembl:YGR159C(identity) - crc64:D5AB6EB2C129922D crc64:90DEEE7BBC20BC0C figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rogid:q0/AgJC55iTpn/5kCsxal2kQ7Ls559292 rigid:+3EJF7hls3x0HL7pwyyORvGXWvw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P47077 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-25778|uniprotkb:D6VWG7|ensemblfungi:YJL010C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:nop9_yeast(display_long)|uniprotkb:YJL010C(locus name)|uniprotkb:J1357(orf name)|uniprotkb:NOP9(gene name)|psi-mi:NOP9(display_short)|uniprotkb:Pumilio domain-containing protein NOP9(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687748|imex:IM-25795-147 author score:0.6 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) sgd:S000003547|refseq:NP_012524.3|mint:P47077|dip:DIP-5668N|ensemblfungi:YJL010C(gene)|ensemblfungi:YJL010C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR001313(Pumilio RNA-binding region)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040000|rcsb pdb:5SVD|rcsb pdb:5WTX|rcsb pdb:5WTY|rcsb pdb:6WPI|ensembl:YJL010C(identity) - crc64:9278BF873834FC7E - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:zlvVoDVv08jbqC1RJk7A/DhmIbE559292 rigid:aFvs/EdP57y9FWgJnKPSsNbHR10 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53866 uniprotkb:P20448 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687952|imex:IM-25795-7 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rigid:XqQTePQgMjZqI1l1W4os1D2CnCc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53866 uniprotkb:P53317 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687964|imex:IM-25795-661 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rigid:yLjctFLYAW61nRk9D3QWdIe0Ir4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:P38333 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687976|imex:IM-25795-381 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - crc64:7A7F964E2C7FD056 crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:tvRSqOdwi4GC6ESzhEfDrijzW5U false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:Q03532 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688012|imex:IM-25795-121 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - crc64:7A7F964E2C7FD056 crc64:EE15D51A7F6BE1A2 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:TCdXImAPq1ZtEMKJFrilj9q1vPE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06344 uniprotkb:Q03532 intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688000|imex:IM-25795-465 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - crc64:A16FB043D0ED86B7 crc64:EE15D51A7F6BE1A2 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:VsNt4XLRU0Hh4BXHNbKRTPjgPfs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12481 uniprotkb:P38333 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16687988|imex:IM-25795-265 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - - crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:xiQl3bmoIyh9HMMrblf+pbW3GOs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12481 uniprotkb:Q03532 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688024|imex:IM-25795-9 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - - crc64:EE15D51A7F6BE1A2 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:dp6UFck7cb3i7f5JMYeZAO89rPo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:Q03532 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688036|imex:IM-25795-663 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - - crc64:EE15D51A7F6BE1A2 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:P596OqtvEonJxowmBhmxUGpMEMs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P15646 uniprotkb:P34247 intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W intact:EBI-20162|uniprotkb:D6VXI8|ensemblfungi:YKL099C psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:utp11_yeast(display_long)|uniprotkb:UTP11(gene name)|psi-mi:UTP11(display_short)|uniprotkb:YKL099C(locus name)|uniprotkb:YKL449(orf name)|uniprotkb:U three protein 11(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688240|imex:IM-25795-151 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL014W(identity) refseq:NP_012823.2|sgd:S000001582|reactome:R-SCE-6791226|ensemblfungi:YKL099C(gene)|ensemblfungi:YKL099C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0006364"(rRNA processing)|go:"GO:0006412"(translation)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007144(Small-subunit processome, Utp11)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|dip:DIP-6569N|ensembl:YKL099C(identity) - crc64:56A8B958A7B6066E crc64:AA013651708C4DB6 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 rogid:vMwGUuqsRuE9MZMert1+O6QTWak559292 rigid:qHLF5ZzMvHuVEGGYUNZg78gtk9U false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:P53251 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-23221|ensemblfungi:YGR081C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688228|imex:IM-25795-249 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) - crc64:7A7F964E2C7FD056 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rigid:JTejq03pEvQDiLdbt3TTKVA2rF4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40362 uniprotkb:Q06132 intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688216|imex:IM-25795-127 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:0FEBD4540CF039DA crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:T0glSB1CMZ48HoxLtIi+sYTZ93Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:Q06132 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688204|imex:IM-25795-569 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - - crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:ca9mpndsne5C68JsuPdZVENHkN0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06132 uniprotkb:Q06132 intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688192|imex:IM-25795-567 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:8EEFDB8258407FF3 crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:dZglozTulnjHkqnNq+TJ6ZnGbCA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53866 uniprotkb:Q06132 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688180|imex:IM-25795-565 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - - crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:m1hsedKEViaRP1DVMeEmD+s0q74 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53335 uniprotkb:Q06132 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688168|imex:IM-25795-247 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:D5AB6EB2C129922D crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:4sjVenVuJ0gZRZq7SmLKV0n6G3g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06344 uniprotkb:P38712 intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C intact:EBI-16007|uniprotkb:Q6TQT5|uniprotkb:Q6TQT6|ensemblfungi:YHR065C|uniprotkb:D3DL14 psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:rrp3_yeast(display_long)|uniprotkb:RRP3(gene name)|psi-mi:RRP3(display_short)|uniprotkb:Ribosomal RNA-processing protein 3(gene name synonym)|uniprotkb:YHR065C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688156|imex:IM-25795-245 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) refseq:NP_011932.2|sgd:S000001107|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR044765|reactome:R-SCE-6791226|ensemblfungi:YHR065C(gene)|ensemblfungi:YHR065C_mRNA(transcript)|dip:DIP-6533N|mint:P38712|ensembl:YHR065C(identity) - crc64:A16FB043D0ED86B7 crc64:AA17798E0897272F figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rogid:EDMS6kbydKXX1fn1HN5qH26h7oE559292 rigid:0Z6ViDWfu31KYzAXddwI6yL22lE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P53131 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688144|imex:IM-25795-541 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|ensembl:YGL120C(identity) - crc64:9278BF873834FC7E crc64:DA8A085EC50FF430 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rigid:VZARppAz/6SFYs2nGOr2glnhbPo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P53131 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688132|imex:IM-25795-447 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|ensembl:YGL120C(identity) - crc64:AAFA78B5F6215D89 crc64:DA8A085EC50FF430 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rigid:g4wlduUb2SJXPBz72a0vqPrc7FM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P53866 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688120|imex:IM-25795-243 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:9278BF873834FC7E - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:hLMemGXzI5YQZ5k9potDStNkpiQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P53866 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688108|imex:IM-25795-125 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:9A2B5C885493D7D3 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:cisMXSj1QOTgyWSiK0gKZ3jgcqc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06512 uniprotkb:P40079 intact:EBI-36459|uniprotkb:D6W4E1|ensemblfungi:YPR144C intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W psi-mi:noc4_yeast(display_long)|uniprotkb:NOC4(gene name)|psi-mi:NOC4(display_short)|uniprotkb:UTP19(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 19(gene name synonym)|uniprotkb:U three protein 19(gene name synonym)|uniprotkb:YPR144C(locus name) psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688096|imex:IM-25795-761 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015470.1|sgd:S000006348|mint:Q06512|dip:DIP-4555N|ensemblfungi:YPR144C(gene)|ensemblfungi:YPR144C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR005612(CBF)|interpro:IPR027193|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPR144C(identity) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) - - crc64:77B7F3F126036489 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:M+Te42uFKtlIFUYnsmPmKzkSCZw559292 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rigid:zV+Bf3lqdumQRXzKynf7fGFsdaw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06132 uniprotkb:P40079 intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688084|imex:IM-25795-123 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) - crc64:8EEFDB8258407FF3 crc64:77B7F3F126036489 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rigid:xn6ndWfmzQMhm5Hpc9++j94g86I false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40079 uniprotkb:P40079 intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688072|imex:IM-25795-445 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) - crc64:77B7F3F126036489 crc64:77B7F3F126036489 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rigid:yXf52raiRVlP5xHk7cr7PaDWGTs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P40079 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688060|imex:IM-25795-443 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) - crc64:AAFA78B5F6215D89 crc64:77B7F3F126036489 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rigid:Yt2mumq6pLscxgZJmdveOwRWPtk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04500 uniprotkb:P25586 intact:EBI-27917|uniprotkb:D6W0J2|ensemblfungi:YML093W intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C psi-mi:utp14_yeast(display_long)|uniprotkb:YML093W(locus name)|uniprotkb:U three protein 14(gene name synonym)|uniprotkb:UTP14(gene name)|psi-mi:UTP14(display_short) psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688048|imex:IM-25795-441 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013617.1|sgd:S000004558|dip:DIP-6410N|mint:Q04500|ensemblfungi:YML093W(gene)|ensemblfungi:YML093W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR006709(Small-subunit processome, Utp14)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YML093W(identity) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) - crc64:0D4FC90D1CB3CFF1 crc64:7A7F964E2C7FD056 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:qK1PLcsc58zlpaWpK/18rTqXH/Q559292 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rigid:6ah0GbDnqw7cAa7lRvuPaPr23nE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P42945 uniprotkb:Q04500 intact:EBI-1884|uniprotkb:D6VW75|ensemblfungi:YJL109C intact:EBI-27917|uniprotkb:D6W0J2|ensemblfungi:YML093W psi-mi:utp10_yeast(display_long)|uniprotkb:UTP10(gene name)|psi-mi:UTP10(display_short)|uniprotkb:t-UTP10(gene name synonym)|uniprotkb:U three protein 10(gene name synonym)|uniprotkb:U3 protein 10 required for transcription(gene name synonym)|uniprotkb:J0808(orf name)|uniprotkb:YJL109C(locus name) psi-mi:utp14_yeast(display_long)|uniprotkb:YML093W(locus name)|uniprotkb:U three protein 14(gene name synonym)|uniprotkb:UTP14(gene name)|psi-mi:UTP14(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688252|imex:IM-25795-665 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012426.1|sgd:S000003645|dip:DIP-6466N|mint:P42945|ensemblfungi:YJL109C(gene)|ensemblfungi:YJL109C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012954(BP28, C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR022125|interpro:IPR040191|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL109C(identity) refseq:NP_013617.1|sgd:S000004558|dip:DIP-6410N|mint:Q04500|ensemblfungi:YML093W(gene)|ensemblfungi:YML093W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR006709(Small-subunit processome, Utp14)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YML093W(identity) - crc64:064480D1D249B241 crc64:0D4FC90D1CB3CFF1 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:c7sxmixQnRLFmjuUMDkqZ260ebg559292 rogid:qK1PLcsc58zlpaWpK/18rTqXH/Q559292 rigid:MWhGgHxLRxMgKo8jTVLe5M+GCbo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47083 uniprotkb:Q99207 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688264|imex:IM-25795-449 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - crc64:DEAF52FC003A0FFD crc64:F7615D96B02E15DE figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:2TNRfGirB8rNbgrw+Fod7ReYE8Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06512 uniprotkb:Q99207 intact:EBI-36459|uniprotkb:D6W4E1|ensemblfungi:YPR144C intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:noc4_yeast(display_long)|uniprotkb:NOC4(gene name)|psi-mi:NOC4(display_short)|uniprotkb:UTP19(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 19(gene name synonym)|uniprotkb:U three protein 19(gene name synonym)|uniprotkb:YPR144C(locus name) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688276|imex:IM-25795-153 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015470.1|sgd:S000006348|mint:Q06512|dip:DIP-4555N|ensemblfungi:YPR144C(gene)|ensemblfungi:YPR144C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR005612(CBF)|interpro:IPR027193|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPR144C(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - - crc64:F7615D96B02E15DE figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:M+Te42uFKtlIFUYnsmPmKzkSCZw559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:3U8wMs7QabM0fj7bmBAg82f00q8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P20448 uniprotkb:P53254 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688307|imex:IM-25795-571 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - - crc64:9A2B5C885493D7D3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:Zle7B9YPzxGT5+k62pTfNApSJvg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P35194 uniprotkb:P53254 intact:EBI-1871|uniprotkb:D6VPZ8|ensemblfungi:YBL004W intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:utp20_yeast(display_long)|uniprotkb:YBL004W(locus name)|uniprotkb:YBL0101(orf name)|uniprotkb:UTP20(gene name)|psi-mi:UTP20(display_short)|uniprotkb:U three protein 20(gene name synonym) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688331|imex:IM-25795-451 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009551.2|sgd:S000000100|dip:DIP-2826N|mint:P35194|ensemblfungi:YBL004W(gene)|ensemblfungi:YBL004W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|interpro:IPR011430(Down-regulated in metastasis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBL004W(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - crc64:F6ED4E3E9AE0F468 crc64:9A2B5C885493D7D3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jHfpz76nt2tQEEWYeM1PJlP4G8Q559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:mHudkrU0dM4bGMxCr5wF82nC3mg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53866 uniprotkb:P53254 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688319|imex:IM-25795-251 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - - crc64:9A2B5C885493D7D3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:cisMXSj1QOTgyWSiK0gKZ3jgcqc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06512 uniprotkb:Q02354 intact:EBI-36459|uniprotkb:D6W4E1|ensemblfungi:YPR144C intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:noc4_yeast(display_long)|uniprotkb:NOC4(gene name)|psi-mi:NOC4(display_short)|uniprotkb:UTP19(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 19(gene name synonym)|uniprotkb:U three protein 19(gene name synonym)|uniprotkb:YPR144C(locus name) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688427|imex:IM-25795-157 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015470.1|sgd:S000006348|mint:Q06512|dip:DIP-4555N|ensemblfungi:YPR144C(gene)|ensemblfungi:YPR144C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR005612(CBF)|interpro:IPR027193|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPR144C(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - - crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:M+Te42uFKtlIFUYnsmPmKzkSCZw559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:UtY8yWNqe+BLDTy/GXPDp08ttVU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43639 uniprotkb:P43639 intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688439|imex:IM-25795-159 author score:0.64 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:9ACA8D285E6990AF crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:3KNmm+vxX59ETK1zxgKpjm/fajo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53335 uniprotkb:P53131 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688451|imex:IM-25795-455 author score:0.64 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|ensembl:YGL120C(identity) - crc64:D5AB6EB2C129922D crc64:DA8A085EC50FF430 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rigid:NOZQ3DA+l7F4sZCDZdc572zdxlM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40362 uniprotkb:Q06078 intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C intact:EBI-359|uniprotkb:D6VZ43|ensemblfungi:YLR409C psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:utp21_yeast(display_long)|uniprotkb:YLR409C(locus name)|uniprotkb:L8084.22(orf name)|uniprotkb:UTP21(gene name)|psi-mi:UTP21(display_short)|uniprotkb:U three protein 21(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688463|imex:IM-25795-763 author score:0.64 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) sgd:S000004401|refseq:NP_013513.3|dip:DIP-6416N|mint:Q06078|ensemblfungi:YLR409C(gene)|ensemblfungi:YLR409C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR007319(Small-subunit processome, Utp21)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|rcsb pdb:4HNX|rcsb pdb:4NSX|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR409C(identity) - crc64:0FEBD4540CF039DA crc64:F1F856EF28369351 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rogid:p8cVdV7LI9hwgOSJSz2SUk+Z6Aw559292 rigid:GozcDR7XHsVET/8TP/qmJ+lAElI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06078 uniprotkb:P40498 intact:EBI-359|uniprotkb:D6VZ43|ensemblfungi:YLR409C intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:utp21_yeast(display_long)|uniprotkb:YLR409C(locus name)|uniprotkb:L8084.22(orf name)|uniprotkb:UTP21(gene name)|psi-mi:UTP21(display_short)|uniprotkb:U three protein 21(gene name synonym) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688475|imex:IM-25795-255 author score:0.64 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004401|refseq:NP_013513.3|dip:DIP-6416N|mint:Q06078|ensemblfungi:YLR409C(gene)|ensemblfungi:YLR409C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR007319(Small-subunit processome, Utp21)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|rcsb pdb:4HNX|rcsb pdb:4NSX|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR409C(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - crc64:F1F856EF28369351 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:p8cVdV7LI9hwgOSJSz2SUk+Z6Aw559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:dOo47eeEukqF8YklGZWKnlli4D0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39990 uniprotkb:P15646 intact:EBI-12032|ensemblfungi:YEL026W|uniprotkb:D3DLM2 intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W psi-mi:snu13_yeast(display_long)|uniprotkb:YEL026W(locus name)|uniprotkb:SNU13(gene name)|psi-mi:SNU13(display_short)|uniprotkb:Small nuclear ribonucleoprotein-associated protein 1(gene name synonym) psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688487|imex:IM-25795-457 author score:0.64 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL026W(gene)|ensemblfungi:YEL026W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030621"(U4 snRNA binding)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:1905216"(positive regulation of RNA binding)|interpro:IPR002415(High mobility group-like nuclear protein)|interpro:IPR004037(Ribosomal protein L7Ae)|interpro:IPR004038(Ribosomal protein L7Ae/L30e/S12e/Gadd45)|interpro:IPR018492|interpro:IPR029064|rcsb pdb:1ZWZ|rcsb pdb:2ALE|rcsb pdb:3JCM|go:"GO:0005654"(nucleoplasm)|rcsb pdb:5GAN|rcsb pdb:5GAP|rcsb pdb:5NRL|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|rcsb pdb:4NUT|reactome:R-SCE-6791226|refseq:NP_010888.1|sgd:S000000752|mint:P39990|dip:DIP-2870N|ensembl:YEL026W(identity) refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL014W(identity) - crc64:4489780153E8F182 crc64:56A8B958A7B6066E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:4C07wkvZ4Nts4Oxw4/L7QMkwcmE559292 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 rigid:A3Ap9NHCHyCKpAjAxo3CPLN/yqY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39990 uniprotkb:Q12460 intact:EBI-12032|ensemblfungi:YEL026W|uniprotkb:D3DLM2 intact:EBI-17148|ensemblfungi:YLR197W|uniprotkb:D6VYK0 psi-mi:snu13_yeast(display_long)|uniprotkb:YEL026W(locus name)|uniprotkb:SNU13(gene name)|psi-mi:SNU13(display_short)|uniprotkb:Small nuclear ribonucleoprotein-associated protein 1(gene name synonym) psi-mi:nop56_yeast(display_long)|uniprotkb:SIK1(gene name synonym)|uniprotkb:Ribosome biosynthesis protein SIK1(gene name synonym)|uniprotkb:YLR197W(locus name)|uniprotkb:L8167.9(orf name)|uniprotkb:NOP56(gene name)|psi-mi:NOP56(display_short)|uniprotkb:Suppressor of I kappa b protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688499|imex:IM-25795-669 author score:0.64 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL026W(gene)|ensemblfungi:YEL026W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030621"(U4 snRNA binding)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:1905216"(positive regulation of RNA binding)|interpro:IPR002415(High mobility group-like nuclear protein)|interpro:IPR004037(Ribosomal protein L7Ae)|interpro:IPR004038(Ribosomal protein L7Ae/L30e/S12e/Gadd45)|interpro:IPR018492|interpro:IPR029064|rcsb pdb:1ZWZ|rcsb pdb:2ALE|rcsb pdb:3JCM|go:"GO:0005654"(nucleoplasm)|rcsb pdb:5GAN|rcsb pdb:5GAP|rcsb pdb:5NRL|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|rcsb pdb:4NUT|reactome:R-SCE-6791226|refseq:NP_010888.1|sgd:S000000752|mint:P39990|dip:DIP-2870N|ensembl:YEL026W(identity) ensemblfungi:YLR197W(gene)|ensemblfungi:YLR197W_mRNA(transcript)|go:"GO:0000154"(rRNA modification)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|refseq:NP_013298.1|sgd:S000004187|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-4405N|mint:Q12460|ensembl:YLR197W(identity) - crc64:4489780153E8F182 crc64:F8522A5870EF4842 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:4C07wkvZ4Nts4Oxw4/L7QMkwcmE559292 rogid:l3UAmoOUECH1uov6nv7MSwSv/3s559292 rigid:WOZiATKvLW5Q+TbqdKAawtTtAQU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53866 uniprotkb:P53131 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688511|imex:IM-25795-13 author score:0.64 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|ensembl:YGL120C(identity) - - crc64:DA8A085EC50FF430 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rigid:YccIs1EqaSuCfIjPqHJQv8aJqP0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06078 uniprotkb:P25635 intact:EBI-359|uniprotkb:D6VZ43|ensemblfungi:YLR409C intact:EBI-14332|uniprotkb:P25633|uniprotkb:P25636|uniprotkb:D6VR63|ensemblfungi:YCR057C psi-mi:utp21_yeast(display_long)|uniprotkb:YLR409C(locus name)|uniprotkb:L8084.22(orf name)|uniprotkb:UTP21(gene name)|psi-mi:UTP21(display_short)|uniprotkb:U three protein 21(gene name synonym) psi-mi:pwp2_yeast(display_long)|uniprotkb:PWP2(gene name)|psi-mi:PWP2(display_short)|uniprotkb:UTP1(gene name synonym)|uniprotkb:YCR057C(locus name)|uniprotkb:YCR55C/YCR57C/YCR58C(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 1(gene name synonym)|uniprotkb:U three protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688523|imex:IM-25795-467 author score:0.64 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004401|refseq:NP_013513.3|dip:DIP-6416N|mint:Q06078|ensemblfungi:YLR409C(gene)|ensemblfungi:YLR409C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR007319(Small-subunit processome, Utp21)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|rcsb pdb:4HNX|rcsb pdb:4NSX|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR409C(identity) go:"GO:0000920"(septum digestion after cytokinesis)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR027145|interpro:IPR036322|rcsb pdb:5I2T|rcsb pdb:5WLC|rcsb pdb:5WYJ|ensemblfungi:YCR057C(gene)|ensemblfungi:YCR057C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:5WYK|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_009984.1|sgd:S000000653|mint:P25635|dip:DIP-1868N|ensembl:YCR057C(identity) - crc64:F1F856EF28369351 crc64:CBEE4720F81378B6 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:p8cVdV7LI9hwgOSJSz2SUk+Z6Aw559292 rogid:3JKhaE50yPlCymnkEC14JB9atNY559292 rigid:HlUB+y8wWMO+QrspJe7uO7MMgWM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53276 uniprotkb:P42945 intact:EBI-23301|uniprotkb:D6VUR0|ensemblfungi:YGR128C intact:EBI-1884|uniprotkb:D6VW75|ensemblfungi:YJL109C psi-mi:utp8_yeast(display_long)|uniprotkb:UTP8(gene name)|psi-mi:UTP8(display_short)|uniprotkb:t-UTP8(gene name synonym)|uniprotkb:U three protein 8(gene name synonym)|uniprotkb:U3 protein 8 required for transcription(gene name synonym)|uniprotkb:YGR128C(locus name) psi-mi:utp10_yeast(display_long)|uniprotkb:UTP10(gene name)|psi-mi:UTP10(display_short)|uniprotkb:t-UTP10(gene name synonym)|uniprotkb:U three protein 10(gene name synonym)|uniprotkb:U3 protein 10 required for transcription(gene name synonym)|uniprotkb:J0808(orf name)|uniprotkb:YJL109C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688535|imex:IM-25795-577 author score:0.64 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003360|refseq:NP_011644.3|dip:DIP-6747N|mint:P53276|ensemblfungi:YGR128C(gene)|ensemblfungi:YGR128C_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR018843|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YGR128C(identity) refseq:NP_012426.1|sgd:S000003645|dip:DIP-6466N|mint:P42945|ensemblfungi:YJL109C(gene)|ensemblfungi:YJL109C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012954(BP28, C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR022125|interpro:IPR040191|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL109C(identity) - crc64:6F5AE1492F841F49 crc64:064480D1D249B241 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:dG2UtBMuPQujwdovAL/FDjpqps0559292 rogid:c7sxmixQnRLFmjuUMDkqZ260ebg559292 rigid:qyhnVafpCcUu261beCC1e9TuxuY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02931 uniprotkb:Q02931 intact:EBI-37773|uniprotkb:D6W3P1|ensemblfungi:YPL126W intact:EBI-37773|uniprotkb:D6W3P1|ensemblfungi:YPL126W psi-mi:utp17_yeast(display_long)|uniprotkb:NAN1(gene name)|psi-mi:NAN1(display_short)|uniprotkb:UTP17(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 17(gene name synonym)|uniprotkb:U three protein 17(gene name synonym)|uniprotkb:U3 protein 17 required for transcription(gene name synonym)|uniprotkb:YPL126W(locus name) psi-mi:utp17_yeast(display_long)|uniprotkb:NAN1(gene name)|psi-mi:NAN1(display_short)|uniprotkb:UTP17(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 17(gene name synonym)|uniprotkb:U three protein 17(gene name synonym)|uniprotkb:U3 protein 17 required for transcription(gene name synonym)|uniprotkb:YPL126W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688547|imex:IM-25795-671 author score:0.64 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015199.1|sgd:S000006047|dip:DIP-3999N|mint:Q02931|ensemblfungi:YPL126W(gene)|ensemblfungi:YPL126W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPL126W(identity) refseq:NP_015199.1|sgd:S000006047|dip:DIP-3999N|mint:Q02931|ensemblfungi:YPL126W(gene)|ensemblfungi:YPL126W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPL126W(identity) - crc64:F4E3687BD328230E crc64:F4E3687BD328230E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:IwajTHwER9UA233SxhHd4/5Tmu0559292 rogid:IwajTHwER9UA233SxhHd4/5Tmu0559292 rigid:6AVYwUVAIprwEko33busgiIfMuw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25635 uniprotkb:Q06078 intact:EBI-14332|uniprotkb:P25633|uniprotkb:P25636|uniprotkb:D6VR63|ensemblfungi:YCR057C intact:EBI-359|uniprotkb:D6VZ43|ensemblfungi:YLR409C psi-mi:pwp2_yeast(display_long)|uniprotkb:PWP2(gene name)|psi-mi:PWP2(display_short)|uniprotkb:UTP1(gene name synonym)|uniprotkb:YCR057C(locus name)|uniprotkb:YCR55C/YCR57C/YCR58C(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 1(gene name synonym)|uniprotkb:U three protein 1(gene name synonym) psi-mi:utp21_yeast(display_long)|uniprotkb:YLR409C(locus name)|uniprotkb:L8084.22(orf name)|uniprotkb:UTP21(gene name)|psi-mi:UTP21(display_short)|uniprotkb:U three protein 21(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688559|imex:IM-25795-371 author score:0.64 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000920"(septum digestion after cytokinesis)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR027145|interpro:IPR036322|rcsb pdb:5I2T|rcsb pdb:5WLC|rcsb pdb:5WYJ|ensemblfungi:YCR057C(gene)|ensemblfungi:YCR057C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:5WYK|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_009984.1|sgd:S000000653|mint:P25635|dip:DIP-1868N|ensembl:YCR057C(identity) sgd:S000004401|refseq:NP_013513.3|dip:DIP-6416N|mint:Q06078|ensemblfungi:YLR409C(gene)|ensemblfungi:YLR409C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR007319(Small-subunit processome, Utp21)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|rcsb pdb:4HNX|rcsb pdb:4NSX|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR409C(identity) - crc64:CBEE4720F81378B6 crc64:F1F856EF28369351 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:3JKhaE50yPlCymnkEC14JB9atNY559292 rogid:p8cVdV7LI9hwgOSJSz2SUk+Z6Aw559292 rigid:HlUB+y8wWMO+QrspJe7uO7MMgWM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06512 uniprotkb:Q12136 intact:EBI-36459|uniprotkb:D6W4E1|ensemblfungi:YPR144C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:noc4_yeast(display_long)|uniprotkb:NOC4(gene name)|psi-mi:NOC4(display_short)|uniprotkb:UTP19(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 19(gene name synonym)|uniprotkb:U three protein 19(gene name synonym)|uniprotkb:YPR144C(locus name) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688379|imex:IM-25795-573 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015470.1|sgd:S000006348|mint:Q06512|dip:DIP-4555N|ensemblfungi:YPR144C(gene)|ensemblfungi:YPR144C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR005612(CBF)|interpro:IPR027193|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPR144C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - - crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:M+Te42uFKtlIFUYnsmPmKzkSCZw559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:lXt/MEETZCki2y+ssT969pGqyrA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:Q12136 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688367|imex:IM-25795-11 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:7A7F964E2C7FD056 crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:SLzxx4q3TJTqhNUHQiyt1yVW+LI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P20448 uniprotkb:Q12136 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688355|imex:IM-25795-453 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - - crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:1l65zzw6IhclRYBqfbmpR7aOVHY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q05498 uniprotkb:P53254 intact:EBI-30765|uniprotkb:D6VSX1|ensemblfungi:YDR339C intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:fcf1_yeast(display_long)|uniprotkb:FAF1-copurifying factor 1(gene name synonym)|uniprotkb:FCF1(gene name)|psi-mi:FCF1(display_short)|uniprotkb:D9651.9(orf name)|uniprotkb:YDR339C(locus name) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688343|imex:IM-25795-253 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010626.1|sgd:S000002747|reactome:R-SCE-6791226|dip:DIP-6627N|ensemblfungi:YDR339C(gene)|ensemblfungi:YDR339C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002716(PilT protein, N-terminal)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|interpro:IPR037503|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YDR339C(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - crc64:0089AD246BA08473 crc64:9A2B5C885493D7D3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vXv6E9iWmq4OoPoF1JmK/LyE5G8559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:AIAEW3cCPerhB4FHSl7S6TeYTr4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:Q06344 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688703|imex:IM-25795-645 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) - crc64:AAFA78B5F6215D89 crc64:A16FB043D0ED86B7 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rigid:80j1trcvFI0UUjIchsRNnhBOw5k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:Q04217 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-1820|ensemblfungi:YMR128W|uniprotkb:D6VZV1 psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:dhr1_yeast(display_long)|uniprotkb:ECM16(gene name)|psi-mi:ECM16(display_short)|uniprotkb:DHR1(gene name synonym)|uniprotkb:YMR128W(locus name)|uniprotkb:YM9553.04(orf name)|uniprotkb:DEAH box RNA helicase DHR1(gene name synonym)|uniprotkb:Extracellular mutant protein 16(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688691|imex:IM-25795-257 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) ensemblfungi:YMR128W(gene)|ensemblfungi:YMR128W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|rcsb pdb:6H57|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_013847.1|sgd:S000004735|dip:DIP-6722N|mint:Q04217|ensembl:YMR128W(identity) - crc64:60FD2E0E1B3B79B3 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:UN6v3h4OiKlKuYfkyy/fHqmkri8559292 rigid:BFWYfY+PZmxgcJQzBZnC0U2NJl8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25635 uniprotkb:Q12220 intact:EBI-14332|uniprotkb:P25633|uniprotkb:P25636|uniprotkb:D6VR63|ensemblfungi:YCR057C intact:EBI-5896|uniprotkb:Q05386|uniprotkb:D6VYC4|ensemblfungi:YLR129W psi-mi:pwp2_yeast(display_long)|uniprotkb:PWP2(gene name)|psi-mi:PWP2(display_short)|uniprotkb:UTP1(gene name synonym)|uniprotkb:YCR057C(locus name)|uniprotkb:YCR55C/YCR57C/YCR58C(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 1(gene name synonym)|uniprotkb:U three protein 1(gene name synonym) psi-mi:utp12_yeast(display_long)|uniprotkb:DIP2(gene name)|psi-mi:DIP2(display_short)|uniprotkb:YLR129W(locus name)|uniprotkb:L9233.1(orf name)|uniprotkb:L3116(orf name)|uniprotkb:UTP12(gene name synonym)|uniprotkb:U three protein 12(gene name synonym)|uniprotkb:DOM34-interacting protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688679|imex:IM-25795-15 author score:0.69 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000920"(septum digestion after cytokinesis)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR027145|interpro:IPR036322|rcsb pdb:5I2T|rcsb pdb:5WLC|rcsb pdb:5WYJ|ensemblfungi:YCR057C(gene)|ensemblfungi:YCR057C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:5WYK|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_009984.1|sgd:S000000653|mint:P25635|dip:DIP-1868N|ensembl:YCR057C(identity) refseq:NP_013230.1|sgd:S000004119|dip:DIP-6494N|mint:Q12220|ensemblfungi:YLR129W(gene)|ensemblfungi:YLR129W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR129W(identity) - crc64:CBEE4720F81378B6 crc64:7D9AEC7AF6A9C740 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:3JKhaE50yPlCymnkEC14JB9atNY559292 rogid:8Cz4O8hzaHCSq72kVSptQqDE94M559292 rigid:UiG94S5h3Fggls1RLPE94gSilWU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P34247 uniprotkb:Q12136 intact:EBI-20162|uniprotkb:D6VXI8|ensemblfungi:YKL099C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:utp11_yeast(display_long)|uniprotkb:UTP11(gene name)|psi-mi:UTP11(display_short)|uniprotkb:YKL099C(locus name)|uniprotkb:YKL449(orf name)|uniprotkb:U three protein 11(gene name synonym) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688667|imex:IM-25795-373 author score:0.68 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012823.2|sgd:S000001582|reactome:R-SCE-6791226|ensemblfungi:YKL099C(gene)|ensemblfungi:YKL099C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0006364"(rRNA processing)|go:"GO:0006412"(translation)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007144(Small-subunit processome, Utp11)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|dip:DIP-6569N|ensembl:YKL099C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:AA013651708C4DB6 crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vMwGUuqsRuE9MZMert1+O6QTWak559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:BkZ8GjxfbIG2DnyvgV7UcOcW4tY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P45818 uniprotkb:Q12136 intact:EBI-15686|uniprotkb:D6VTY1|ensemblfungi:YGL171W intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:rok1_yeast(display_long)|uniprotkb:ROK1(gene name)|psi-mi:ROK1(display_short)|uniprotkb:YGL171W(locus name)|uniprotkb:G1651(orf name)|uniprotkb:Rescuer of KEM1 protein 1(gene name synonym) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688655|imex:IM-25795-643 author score:0.68 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011344.1|sgd:S000003139|ensemblfungi:YGL171W(gene)|ensemblfungi:YGL171W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0048254"(snoRNA localization)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR044764|reactome:R-SCE-6791226|dip:DIP-5111N|mint:P45818|ensembl:YGL171W(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:CACB950B8A15D5A2 crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Id8imuuTKPSw1r4qwGClHrYAxpQ559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:97sBCcd+4b6kZm2NiSfiwpy5Ta8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:Q06078 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-359|uniprotkb:D6VZ43|ensemblfungi:YLR409C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:utp21_yeast(display_long)|uniprotkb:YLR409C(locus name)|uniprotkb:L8084.22(orf name)|uniprotkb:UTP21(gene name)|psi-mi:UTP21(display_short)|uniprotkb:U three protein 21(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688643|imex:IM-25795-459 author score:0.68 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) sgd:S000004401|refseq:NP_013513.3|dip:DIP-6416N|mint:Q06078|ensemblfungi:YLR409C(gene)|ensemblfungi:YLR409C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR007319(Small-subunit processome, Utp21)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|rcsb pdb:4HNX|rcsb pdb:4NSX|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR409C(identity) - crc64:AAFA78B5F6215D89 crc64:F1F856EF28369351 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:p8cVdV7LI9hwgOSJSz2SUk+Z6Aw559292 rigid:MotXcOWOA0RZyuXBU/ISkn7q2AA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12339 uniprotkb:P25586 intact:EBI-30231|uniprotkb:D6W270|ensemblfungi:YOR004W intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C psi-mi:utp23_yeast(display_long)|uniprotkb:U3 small nucleolar RNA-associated protein 23(gene name synonym)|uniprotkb:U three protein 23(gene name synonym)|uniprotkb:UTP23(gene name)|psi-mi:UTP23(display_short)|uniprotkb:YOR004W(locus name) psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688631|imex:IM-25795-133 author score:0.68 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014646.1|sgd:S000005530|dip:DIP-4352N|mint:Q12339|ensemblfungi:YOR004W(gene)|ensemblfungi:YOR004W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0032040"(small-subunit processome)|go:"GO:0070181"(small ribosomal subunit rRNA binding)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|rcsb pdb:4MJ7|ensembl:YOR004W(identity) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) - crc64:27D00C72F6B492F6 crc64:7A7F964E2C7FD056 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:OvURSlkfCuWUay/vbYqayjai9/A559292 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rigid:cWIANkI6C+sxaZx+u1KFVeQFri4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P32899 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688619|imex:IM-25795-131 author score:0.68 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) - crc64:AAFA78B5F6215D89 crc64:2CA16A3425691DBD figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rigid:OiZFYNAjpUQkjJAuDc6AUaNN8bY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32899 uniprotkb:P36009 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688607|imex:IM-25795-543 author score:0.68 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - crc64:2CA16A3425691DBD crc64:AAFA78B5F6215D89 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:OiZFYNAjpUQkjJAuDc6AUaNN8bY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P38719 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-5633|uniprotkb:D3DLB8|ensemblfungi:YHR169W psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:dbp8_yeast(display_long)|uniprotkb:YHR169W(locus name)|uniprotkb:DBP8(gene name)|psi-mi:DBP8(display_short)|uniprotkb:DEAD box protein 8(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688595|imex:IM-25795-129 author score:0.68 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_012039.1|sgd:S000001212|dip:DIP-5628N|mint:P38719|ensemblfungi:YHR169W(gene)|ensemblfungi:YHR169W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YHR169W(identity) - crc64:9A2B5C885493D7D3 crc64:B0451EB85247372C figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:mnaGKGPAjFq7/Xfe7pSa0B4LEVE559292 rigid:/787fvEctwa7dFbmHczQU2Mc2Mk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47083 uniprotkb:P47083 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688583|imex:IM-25795-765 author score:0.65 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:DEAF52FC003A0FFD crc64:DEAF52FC003A0FFD figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:dsTl0QO/haZFiuXYOpRntqmcawQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08965 uniprotkb:Q02354 intact:EBI-3683|uniprotkb:D6W3F3|ensemblfungi:YPL217C intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:bms1_yeast(display_long)|uniprotkb:YPL217C(locus name)|uniprotkb:BMS1(gene name)|psi-mi:BMS1(display_short) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688415|imex:IM-25795-667 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015107.1|sgd:S000006138|dip:DIP-6562N|mint:Q08965|ensemblfungi:YPL217C(gene)|ensemblfungi:YPL217C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000479"("endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0030686"(90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR007034(Protein of unknown function DUF663)|interpro:IPR012948(AARP2CN)|interpro:IPR027417|interpro:IPR030387|interpro:IPR037875|interpro:IPR039761|rcsb pdb:4CLQ|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPL217C(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - crc64:9A337F1EE0B0F21D crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wG8wlE3l3G1E7VJiO/epPEDxTOE559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:4sxYioJjXKlpfP0K4zs2ljlQMog false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:Q12247 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-36471|uniprotkb:D6VY69|ensemblfungi:YLR068W psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:fyv7_yeast(display_long)|uniprotkb:FYV7(gene name)|psi-mi:FYV7(display_short)|uniprotkb:L2192(orf name)|uniprotkb:Function required for yeast viability protein 7(gene name synonym)|uniprotkb:YLR068W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688571|imex:IM-25795-641 author score:0.65 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_013169.1|sgd:S000004058|mint:Q12247|dip:DIP-4827N|ensemblfungi:YLR068W(gene)|ensemblfungi:YLR068W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|interpro:IPR013730(rRNA processing)|interpro:IPR017265(rRNA processing, FYV7)|ensembl:YLR068W(identity) - crc64:AAFA78B5F6215D89 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:dhsTeopeJ2J1YkT5kRgGvxbFJhw559292 rigid:4nPw//66Xn0gbpabniOE9W5Vcdg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32899 uniprotkb:Q04177 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688391|imex:IM-25795-575 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - crc64:2CA16A3425691DBD crc64:7A6F60C7C6F46C2A figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:IdLIRoqvjNhwdv+kM0bHU+KxXbc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04177 uniprotkb:Q04177 intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688403|imex:IM-25795-155 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - crc64:7A6F60C7C6F46C2A crc64:7A6F60C7C6F46C2A figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:V+aWGGicL6z0wT7agTSWFrE8jxo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P38712 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-16007|uniprotkb:Q6TQT5|uniprotkb:Q6TQT6|ensemblfungi:YHR065C|uniprotkb:D3DL14 psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:rrp3_yeast(display_long)|uniprotkb:RRP3(gene name)|psi-mi:RRP3(display_short)|uniprotkb:Ribosomal RNA-processing protein 3(gene name synonym)|uniprotkb:YHR065C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688751|imex:IM-25795-781 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_011932.2|sgd:S000001107|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR044765|reactome:R-SCE-6791226|ensemblfungi:YHR065C(gene)|ensemblfungi:YHR065C_mRNA(transcript)|dip:DIP-6533N|mint:P38712|ensembl:YHR065C(identity) - crc64:9278BF873834FC7E crc64:AA17798E0897272F figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:EDMS6kbydKXX1fn1HN5qH26h7oE559292 rigid:2+xdOXcp6AzgXYaexFSubJpd9kA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36144 uniprotkb:Q06132 intact:EBI-26459|uniprotkb:D6VXC1|ensemblfungi:YKR060W intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:rl1d1_yeast(display_long)|uniprotkb:YKR060W(locus name)|uniprotkb:UTP30(gene name)|psi-mi:UTP30(display_short)|uniprotkb:U3 snoRNP-associated protein UTP30(gene name synonym) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688763|imex:IM-25795-281 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012986.1|sgd:S000001768|dip:DIP-1926N|ensemblfungi:YKR060W(gene)|ensemblfungi:YKR060W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR023674|interpro:IPR028364|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:5YDT|rcsb pdb:5YDU|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|ensembl:YKR060W(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:897F2B8C54CE8030 crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:55z0clHNVhTle5uf71rBOLbjouo559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:xQtV8qi/NXjFIXbykgPZenDG3OU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P25635 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-14332|uniprotkb:P25633|uniprotkb:P25636|uniprotkb:D6VR63|ensemblfungi:YCR057C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:pwp2_yeast(display_long)|uniprotkb:PWP2(gene name)|psi-mi:PWP2(display_short)|uniprotkb:UTP1(gene name synonym)|uniprotkb:YCR057C(locus name)|uniprotkb:YCR55C/YCR57C/YCR58C(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 1(gene name synonym)|uniprotkb:U three protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688775|imex:IM-25795-283 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) go:"GO:0000920"(septum digestion after cytokinesis)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR027145|interpro:IPR036322|rcsb pdb:5I2T|rcsb pdb:5WLC|rcsb pdb:5WYJ|ensemblfungi:YCR057C(gene)|ensemblfungi:YCR057C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:5WYK|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_009984.1|sgd:S000000653|mint:P25635|dip:DIP-1868N|ensembl:YCR057C(identity) - crc64:9278BF873834FC7E crc64:CBEE4720F81378B6 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:3JKhaE50yPlCymnkEC14JB9atNY559292 rigid:zFBR5QKN/ofiaeZMK/h2qMbWA9I false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:Q05946 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-34702|uniprotkb:D6VYM2|ensemblfungi:YLR222C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:utp13_yeast(display_long)|uniprotkb:UTP13(gene name)|psi-mi:UTP13(display_short)|uniprotkb:U three protein 13(gene name synonym)|uniprotkb:YLR222C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688787|imex:IM-25795-21 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_013323.1|sgd:S000004212|mint:Q05946|dip:DIP-4790N|ensemblfungi:YLR222C(gene)|ensemblfungi:YLR222C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR013934(Small-subunit processome, Utp13)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR222C(identity) - crc64:9A2B5C885493D7D3 crc64:A3DEA4288917027D figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:ODH5ePQUIivfhIrcLu9OwoWowI8559292 rigid:h+3KpLrA8b+tfDCMbAZTS/KqQak false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53914 uniprotkb:Q04500 intact:EBI-28914|uniprotkb:D6W150|ensemblfungi:YNL132W intact:EBI-27917|uniprotkb:D6W0J2|ensemblfungi:YML093W psi-mi:nat10_yeast(display_long)|uniprotkb:KRE33(gene name)|psi-mi:KRE33(display_short)|uniprotkb:18S rRNA cytosine acetyltransferase(gene name synonym)|uniprotkb:Killer toxin-resistance protein 33(gene name synonym)|uniprotkb:NAT10(gene name synonym)|uniprotkb:RRA1(gene name synonym)|uniprotkb:Ribosomal RNA cytidine acetyltransferase 1(gene name synonym)|uniprotkb:N1216(orf name)|uniprotkb:N1858(orf name)|uniprotkb:YNL132W(locus name) psi-mi:utp14_yeast(display_long)|uniprotkb:YML093W(locus name)|uniprotkb:U three protein 14(gene name synonym)|uniprotkb:UTP14(gene name)|psi-mi:UTP14(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688799|imex:IM-25795-481 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014267.1|sgd:S000005076|dip:DIP-6588N|mint:P53914|ensemblfungi:YNL132W(gene)|ensemblfungi:YNL132W_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0016556"(mRNA modification)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0051391"(tRNA acetylation)|go:"GO:1904812"(rRNA acetylation involved in maturation of SSU-rRNA)|go:"GO:1990883"(rRNA cytidine N-acetyltransferase activity)|interpro:IPR000182(GCN5-related N-acetyltransferase)|interpro:IPR007807(Protein of unknown function DUF699, ATPase putative)|interpro:IPR013562(Region of unknown function DUF1726)|interpro:IPR027992|interpro:IPR032672|interpro:IPR033688|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|ensembl:YNL132W(identity) refseq:NP_013617.1|sgd:S000004558|dip:DIP-6410N|mint:Q04500|ensemblfungi:YML093W(gene)|ensemblfungi:YML093W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR006709(Small-subunit processome, Utp14)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YML093W(identity) - crc64:76721ED0867ED618 crc64:0D4FC90D1CB3CFF1 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:mtIY2LZRAJTtaBBydvREm22cVCA559292 rogid:qK1PLcsc58zlpaWpK/18rTqXH/Q559292 rigid:oqUMy1BwRr+m3b5owJY3efiYOHc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:Q06512 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-36459|uniprotkb:D6W4E1|ensemblfungi:YPR144C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:noc4_yeast(display_long)|uniprotkb:NOC4(gene name)|psi-mi:NOC4(display_short)|uniprotkb:UTP19(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 19(gene name synonym)|uniprotkb:U three protein 19(gene name synonym)|uniprotkb:YPR144C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688811|imex:IM-25795-165 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_015470.1|sgd:S000006348|mint:Q06512|dip:DIP-4555N|ensemblfungi:YPR144C(gene)|ensemblfungi:YPR144C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR005612(CBF)|interpro:IPR027193|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPR144C(identity) - crc64:9278BF873834FC7E - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:M+Te42uFKtlIFUYnsmPmKzkSCZw559292 rigid:lXt/MEETZCki2y+ssT969pGqyrA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06506 uniprotkb:P53254 intact:EBI-35124|uniprotkb:D6W4D3|ensemblfungi:YPR137W intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:rrp9_yeast(display_long)|uniprotkb:RRP9(gene name)|psi-mi:RRP9(display_short)|uniprotkb:YPR137W(locus name) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688823|imex:IM-25795-41 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015463.1|sgd:S000006341|mint:Q06506|dip:DIP-6537N|ensemblfungi:YPR137W(gene)|ensemblfungi:YPR137W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR039241|rcsb pdb:4J0X|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPR137W(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - crc64:96BEAB7DC338E70E crc64:9A2B5C885493D7D3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jcGY4AY3fUm5mEoDKsFxA6nvpQg559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:VJ7u9xT6zlSVZ+sr85eQNzWxrRU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12460 uniprotkb:P15646 intact:EBI-17148|ensemblfungi:YLR197W|uniprotkb:D6VYK0 intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W psi-mi:nop56_yeast(display_long)|uniprotkb:SIK1(gene name synonym)|uniprotkb:Ribosome biosynthesis protein SIK1(gene name synonym)|uniprotkb:YLR197W(locus name)|uniprotkb:L8167.9(orf name)|uniprotkb:NOP56(gene name)|psi-mi:NOP56(display_short)|uniprotkb:Suppressor of I kappa b protein 1(gene name synonym) psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688835|imex:IM-25795-683 author score:0.71 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YLR197W(gene)|ensemblfungi:YLR197W_mRNA(transcript)|go:"GO:0000154"(rRNA modification)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|refseq:NP_013298.1|sgd:S000004187|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-4405N|mint:Q12460|ensembl:YLR197W(identity) refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL014W(identity) - crc64:F8522A5870EF4842 crc64:56A8B958A7B6066E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:l3UAmoOUECH1uov6nv7MSwSv/3s559292 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 rigid:wEX2I2CxZ4Odz4nFzxlfWM39LTY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53866 uniprotkb:Q99207 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688847|imex:IM-25795-43 author score:0.72 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - - crc64:F7615D96B02E15DE figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:efNBvTs0UsguydzC7R5F8479fUA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53317 uniprotkb:Q05946 intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W intact:EBI-34702|uniprotkb:D6VYM2|ensemblfungi:YLR222C psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:utp13_yeast(display_long)|uniprotkb:UTP13(gene name)|psi-mi:UTP13(display_short)|uniprotkb:U three protein 13(gene name synonym)|uniprotkb:YLR222C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688859|imex:IM-25795-167 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) refseq:NP_013323.1|sgd:S000004212|mint:Q05946|dip:DIP-4790N|ensemblfungi:YLR222C(gene)|ensemblfungi:YLR222C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR013934(Small-subunit processome, Utp13)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR222C(identity) - - crc64:A3DEA4288917027D figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rogid:ODH5ePQUIivfhIrcLu9OwoWowI8559292 rigid:miD7ZzR2xaXXGOMUqsrFZBueZW0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25368 uniprotkb:P15790 intact:EBI-16019|uniprotkb:D6VQY4|ensemblfungi:YCL031C intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:rrp7_yeast(display_long)|uniprotkb:RRP7(gene name)|psi-mi:RRP7(display_short)|uniprotkb:YCL184(orf name)|uniprotkb:YCL31C(orf name)|uniprotkb:YCL031C(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688871|imex:IM-25795-169 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009899.1|sgd:S000000536|interpro:IPR040446|interpro:IPR040447|rcsb pdb:2MBY|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YCL031C(gene)|ensemblfungi:YCL031C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR024326|dip:DIP-4974N|mint:P25368|ensembl:YCL031C(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:768F43B0057788F2 crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:fovz4jwoSdxp4Yh7KCDYpv3f0mc559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:SZ+rB6xnU8ZC+nnATmD1PIHHbpM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P38719 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-5633|uniprotkb:D3DLB8|ensemblfungi:YHR169W psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:dbp8_yeast(display_long)|uniprotkb:YHR169W(locus name)|uniprotkb:DBP8(gene name)|psi-mi:DBP8(display_short)|uniprotkb:DEAD box protein 8(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688883|imex:IM-25795-301 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_012039.1|sgd:S000001212|dip:DIP-5628N|mint:P38719|ensemblfungi:YHR169W(gene)|ensemblfungi:YHR169W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YHR169W(identity) - crc64:9278BF873834FC7E crc64:B0451EB85247372C figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:mnaGKGPAjFq7/Xfe7pSa0B4LEVE559292 rigid:MXRzwBfEUQlIJcsW/jS41MI1reI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53941 uniprotkb:P36009 intact:EBI-9243|ensemblfungi:YNL075W|uniprotkb:D6W1A4 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:imp4_yeast(display_long)|uniprotkb:IMP4(gene name)|psi-mi:IMP4(display_short)|uniprotkb:YNL075W(locus name)|uniprotkb:N2353(orf name)|uniprotkb:Interacting with MPP10 protein 4(gene name synonym) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688895|imex:IM-25795-581 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YNL075W(gene)|ensemblfungi:YNL075W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|sgd:S000005019|refseq:NP_014324.3|reactome:R-SCE-6791226|dip:DIP-4362N|ensembl:YNL075W(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - - crc64:AAFA78B5F6215D89 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vbv+Sx/noAJOmIh7OYonw2J9ckI559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:xfXUHw1stILp7bSIin74/3exZ0E false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40055 uniprotkb:P53335 intact:EBI-22597|uniprotkb:D3DLY9|ensemblfungi:YER082C intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C psi-mi:utp7_yeast(display_long)|uniprotkb:UTP7(gene name)|psi-mi:UTP7(display_short)|uniprotkb:KRE31(gene name synonym)|uniprotkb:U three protein 7(gene name synonym)|uniprotkb:YER082C(locus name) psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688715|imex:IM-25795-545 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011005.1|sgd:S000000884|dip:DIP-5398N|mint:P40055|ensemblfungi:YER082C(gene)|ensemblfungi:YER082C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|interpro:IPR001680(WD40 repeat)|interpro:IPR012952(BING4, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR036322|interpro:IPR040315|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YER082C(identity) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) - crc64:A254AD9AC1142AA5 crc64:D5AB6EB2C129922D figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:2uFPq4stCHLw5niaXwAZ/7rXjdQ559292 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rigid:EOfe5yWDrMsOkz0sAoBbAeUifdY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32899 uniprotkb:P53866 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688739|imex:IM-25795-681 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:2CA16A3425691DBD - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:Yz+SE7JvHl9XWLINEVEMBlgdvhU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P42945 uniprotkb:P47083 intact:EBI-1884|uniprotkb:D6VW75|ensemblfungi:YJL109C intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:utp10_yeast(display_long)|uniprotkb:UTP10(gene name)|psi-mi:UTP10(display_short)|uniprotkb:t-UTP10(gene name synonym)|uniprotkb:U three protein 10(gene name synonym)|uniprotkb:U3 protein 10 required for transcription(gene name synonym)|uniprotkb:J0808(orf name)|uniprotkb:YJL109C(locus name) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688727|imex:IM-25795-469 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012426.1|sgd:S000003645|dip:DIP-6466N|mint:P42945|ensemblfungi:YJL109C(gene)|ensemblfungi:YJL109C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012954(BP28, C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR022125|interpro:IPR040191|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL109C(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:064480D1D249B241 crc64:DEAF52FC003A0FFD figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:c7sxmixQnRLFmjuUMDkqZ260ebg559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:U3HiLc0w7BaXywk9/HsjwoE75/Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25635 uniprotkb:P40362 intact:EBI-14332|uniprotkb:P25633|uniprotkb:P25636|uniprotkb:D6VR63|ensemblfungi:YCR057C intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:pwp2_yeast(display_long)|uniprotkb:PWP2(gene name)|psi-mi:PWP2(display_short)|uniprotkb:UTP1(gene name synonym)|uniprotkb:YCR057C(locus name)|uniprotkb:YCR55C/YCR57C/YCR58C(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 1(gene name synonym)|uniprotkb:U three protein 1(gene name synonym) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689002|imex:IM-25795-47 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000920"(septum digestion after cytokinesis)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR027145|interpro:IPR036322|rcsb pdb:5I2T|rcsb pdb:5WLC|rcsb pdb:5WYJ|ensemblfungi:YCR057C(gene)|ensemblfungi:YCR057C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:5WYK|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_009984.1|sgd:S000000653|mint:P25635|dip:DIP-1868N|ensembl:YCR057C(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:CBEE4720F81378B6 crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:3JKhaE50yPlCymnkEC14JB9atNY559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:937AZZSXu3HPQa+A+rkEKGiihdI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40055 uniprotkb:Q12136 intact:EBI-22597|uniprotkb:D3DLY9|ensemblfungi:YER082C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:utp7_yeast(display_long)|uniprotkb:UTP7(gene name)|psi-mi:UTP7(display_short)|uniprotkb:KRE31(gene name synonym)|uniprotkb:U three protein 7(gene name synonym)|uniprotkb:YER082C(locus name) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688990|imex:IM-25795-305 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011005.1|sgd:S000000884|dip:DIP-5398N|mint:P40055|ensemblfungi:YER082C(gene)|ensemblfungi:YER082C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|interpro:IPR001680(WD40 repeat)|interpro:IPR012952(BING4, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR036322|interpro:IPR040315|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YER082C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:A254AD9AC1142AA5 crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:2uFPq4stCHLw5niaXwAZ/7rXjdQ559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:C9Z1qDM1gTu0l6Ieh048RLC+Y2E false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36144 uniprotkb:P40362 intact:EBI-26459|uniprotkb:D6VXC1|ensemblfungi:YKR060W intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:rl1d1_yeast(display_long)|uniprotkb:YKR060W(locus name)|uniprotkb:UTP30(gene name)|psi-mi:UTP30(display_short)|uniprotkb:U3 snoRNP-associated protein UTP30(gene name synonym) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688978|imex:IM-25795-785 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012986.1|sgd:S000001768|dip:DIP-1926N|ensemblfungi:YKR060W(gene)|ensemblfungi:YKR060W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR023674|interpro:IPR028364|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:5YDT|rcsb pdb:5YDU|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|ensembl:YKR060W(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:897F2B8C54CE8030 crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:55z0clHNVhTle5uf71rBOLbjouo559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:1vu/JQXG/WXq7GnKPeHjUqGFaVc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32899 uniprotkb:P40362 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688966|imex:IM-25795-483 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:2CA16A3425691DBD crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:EFaAJuTKM0gw+HG0KxBDfzV97S4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P42945 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-1884|uniprotkb:D6VW75|ensemblfungi:YJL109C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:utp10_yeast(display_long)|uniprotkb:UTP10(gene name)|psi-mi:UTP10(display_short)|uniprotkb:t-UTP10(gene name synonym)|uniprotkb:U three protein 10(gene name synonym)|uniprotkb:U3 protein 10 required for transcription(gene name synonym)|uniprotkb:J0808(orf name)|uniprotkb:YJL109C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688954|imex:IM-25795-303 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_012426.1|sgd:S000003645|dip:DIP-6466N|mint:P42945|ensemblfungi:YJL109C(gene)|ensemblfungi:YJL109C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012954(BP28, C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR022125|interpro:IPR040191|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL109C(identity) - crc64:9278BF873834FC7E crc64:064480D1D249B241 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:c7sxmixQnRLFmjuUMDkqZ260ebg559292 rigid:mlXvPQzOeqxbTvThqTnLwsvy9ag false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40079 uniprotkb:P42945 intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W intact:EBI-1884|uniprotkb:D6VW75|ensemblfungi:YJL109C psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:utp10_yeast(display_long)|uniprotkb:UTP10(gene name)|psi-mi:UTP10(display_short)|uniprotkb:t-UTP10(gene name synonym)|uniprotkb:U three protein 10(gene name synonym)|uniprotkb:U3 protein 10 required for transcription(gene name synonym)|uniprotkb:J0808(orf name)|uniprotkb:YJL109C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688942|imex:IM-25795-783 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) refseq:NP_012426.1|sgd:S000003645|dip:DIP-6466N|mint:P42945|ensemblfungi:YJL109C(gene)|ensemblfungi:YJL109C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012954(BP28, C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR022125|interpro:IPR040191|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL109C(identity) - crc64:77B7F3F126036489 crc64:064480D1D249B241 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rogid:c7sxmixQnRLFmjuUMDkqZ260ebg559292 rigid:qFMeqzTOwBXFivxSupBhsp+mmaE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P47083 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688918|imex:IM-25795-45 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:9A2B5C885493D7D3 crc64:DEAF52FC003A0FFD figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:ash0Z7R8OjpMqtUBJWAuTWq0qkA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12220 uniprotkb:Q06132 intact:EBI-5896|uniprotkb:Q05386|uniprotkb:D6VYC4|ensemblfungi:YLR129W intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:utp12_yeast(display_long)|uniprotkb:DIP2(gene name)|psi-mi:DIP2(display_short)|uniprotkb:YLR129W(locus name)|uniprotkb:L9233.1(orf name)|uniprotkb:L3116(orf name)|uniprotkb:UTP12(gene name synonym)|uniprotkb:U three protein 12(gene name synonym)|uniprotkb:DOM34-interacting protein 2(gene name synonym) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16688930|imex:IM-25795-685 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013230.1|sgd:S000004119|dip:DIP-6494N|mint:Q12220|ensemblfungi:YLR129W(gene)|ensemblfungi:YLR129W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR129W(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:7D9AEC7AF6A9C740 crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:8Cz4O8hzaHCSq72kVSptQqDE94M559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:yhylwmOUtiZoV5HXl11b4Zumdvc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:P15790 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689506|imex:IM-25795-705 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:5F38B88CDEEFC01F crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:V4IaptpFc8o7LzvtCCjbC+npvAc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38719 uniprotkb:P53743 intact:EBI-5633|uniprotkb:D3DLB8|ensemblfungi:YHR169W intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C psi-mi:dbp8_yeast(display_long)|uniprotkb:YHR169W(locus name)|uniprotkb:DBP8(gene name)|psi-mi:DBP8(display_short)|uniprotkb:DEAD box protein 8(gene name synonym) psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689014|imex:IM-25795-171 author score:0.76 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012039.1|sgd:S000001212|dip:DIP-5628N|mint:P38719|ensemblfungi:YHR169W(gene)|ensemblfungi:YHR169W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YHR169W(identity) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) - crc64:B0451EB85247372C crc64:5F38B88CDEEFC01F figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:mnaGKGPAjFq7/Xfe7pSa0B4LEVE559292 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rigid:kesK2nZbjhbrtFjS9hPhE/L2yvk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P20448 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689482|imex:IM-25795-495 author score:0.8 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) - crc64:9278BF873834FC7E - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rigid:1l65zzw6IhclRYBqfbmpR7aOVHY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53941 uniprotkb:P40498 intact:EBI-9243|ensemblfungi:YNL075W|uniprotkb:D6W1A4 intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:imp4_yeast(display_long)|uniprotkb:IMP4(gene name)|psi-mi:IMP4(display_short)|uniprotkb:YNL075W(locus name)|uniprotkb:N2353(orf name)|uniprotkb:Interacting with MPP10 protein 4(gene name synonym) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689470|imex:IM-25795-317 author score:0.79 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YNL075W(gene)|ensemblfungi:YNL075W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|sgd:S000005019|refseq:NP_014324.3|reactome:R-SCE-6791226|dip:DIP-4362N|ensembl:YNL075W(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vbv+Sx/noAJOmIh7OYonw2J9ckI559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:MIAPEcj7surufRONOBnEr3OrEG4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:P40362 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689458|imex:IM-25795-493 author score:0.79 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:5F38B88CDEEFC01F crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:Bhx85QqlPbHgeqBfpaJBQJnxLSo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53335 uniprotkb:P39990 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C intact:EBI-12032|ensemblfungi:YEL026W|uniprotkb:D3DLM2 psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:snu13_yeast(display_long)|uniprotkb:YEL026W(locus name)|uniprotkb:SNU13(gene name)|psi-mi:SNU13(display_short)|uniprotkb:Small nuclear ribonucleoprotein-associated protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689446|imex:IM-25795-601 author score:0.79 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) ensemblfungi:YEL026W(gene)|ensemblfungi:YEL026W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030621"(U4 snRNA binding)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:1905216"(positive regulation of RNA binding)|interpro:IPR002415(High mobility group-like nuclear protein)|interpro:IPR004037(Ribosomal protein L7Ae)|interpro:IPR004038(Ribosomal protein L7Ae/L30e/S12e/Gadd45)|interpro:IPR018492|interpro:IPR029064|rcsb pdb:1ZWZ|rcsb pdb:2ALE|rcsb pdb:3JCM|go:"GO:0005654"(nucleoplasm)|rcsb pdb:5GAN|rcsb pdb:5GAP|rcsb pdb:5NRL|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|rcsb pdb:4NUT|reactome:R-SCE-6791226|refseq:NP_010888.1|sgd:S000000752|mint:P39990|dip:DIP-2870N|ensembl:YEL026W(identity) - crc64:D5AB6EB2C129922D crc64:4489780153E8F182 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rogid:4C07wkvZ4Nts4Oxw4/L7QMkwcmE559292 rigid:YrsaRGRw0FY5tdHVU5JFxwp5PCo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40055 uniprotkb:P43639 intact:EBI-22597|uniprotkb:D3DLY9|ensemblfungi:YER082C intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:utp7_yeast(display_long)|uniprotkb:UTP7(gene name)|psi-mi:UTP7(display_short)|uniprotkb:KRE31(gene name synonym)|uniprotkb:U three protein 7(gene name synonym)|uniprotkb:YER082C(locus name) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689434|imex:IM-25795-801 author score:0.79 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011005.1|sgd:S000000884|dip:DIP-5398N|mint:P40055|ensemblfungi:YER082C(gene)|ensemblfungi:YER082C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|interpro:IPR001680(WD40 repeat)|interpro:IPR012952(BING4, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR036322|interpro:IPR040315|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YER082C(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:A254AD9AC1142AA5 crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:2uFPq4stCHLw5niaXwAZ/7rXjdQ559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:NDViOBQcFLlh3IYDtAfbvCNXzK4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04500 uniprotkb:Q04217 intact:EBI-27917|uniprotkb:D6W0J2|ensemblfungi:YML093W intact:EBI-1820|ensemblfungi:YMR128W|uniprotkb:D6VZV1 psi-mi:utp14_yeast(display_long)|uniprotkb:YML093W(locus name)|uniprotkb:U three protein 14(gene name synonym)|uniprotkb:UTP14(gene name)|psi-mi:UTP14(display_short) psi-mi:dhr1_yeast(display_long)|uniprotkb:ECM16(gene name)|psi-mi:ECM16(display_short)|uniprotkb:DHR1(gene name synonym)|uniprotkb:YMR128W(locus name)|uniprotkb:YM9553.04(orf name)|uniprotkb:DEAH box RNA helicase DHR1(gene name synonym)|uniprotkb:Extracellular mutant protein 16(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689422|imex:IM-25795-793 author score:0.79 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013617.1|sgd:S000004558|dip:DIP-6410N|mint:Q04500|ensemblfungi:YML093W(gene)|ensemblfungi:YML093W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR006709(Small-subunit processome, Utp14)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YML093W(identity) ensemblfungi:YMR128W(gene)|ensemblfungi:YMR128W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|rcsb pdb:6H57|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_013847.1|sgd:S000004735|dip:DIP-6722N|mint:Q04217|ensembl:YMR128W(identity) - crc64:0D4FC90D1CB3CFF1 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:qK1PLcsc58zlpaWpK/18rTqXH/Q559292 rogid:UN6v3h4OiKlKuYfkyy/fHqmkri8559292 rigid:QSyBelWqEevV4RQ7pXgVsDlz8yQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36144 uniprotkb:P53866 intact:EBI-26459|uniprotkb:D6VXC1|ensemblfungi:YKR060W intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:rl1d1_yeast(display_long)|uniprotkb:YKR060W(locus name)|uniprotkb:UTP30(gene name)|psi-mi:UTP30(display_short)|uniprotkb:U3 snoRNP-associated protein UTP30(gene name synonym) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689410|imex:IM-25795-315 author score:0.79 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012986.1|sgd:S000001768|dip:DIP-1926N|ensemblfungi:YKR060W(gene)|ensemblfungi:YKR060W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR023674|interpro:IPR028364|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:5YDT|rcsb pdb:5YDU|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|ensembl:YKR060W(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:897F2B8C54CE8030 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:55z0clHNVhTle5uf71rBOLbjouo559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:reU1k4HB2M3QlvdUxjwnVBRvgjA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53335 uniprotkb:P15646 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689398|imex:IM-25795-791 author score:0.79 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL014W(identity) - crc64:D5AB6EB2C129922D crc64:56A8B958A7B6066E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 rigid:UcFyDWjswYEJDzO4MTVhpIn+yyk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:Q99207 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689386|imex:IM-25795-187 author score:0.78 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - crc64:9A2B5C885493D7D3 crc64:F7615D96B02E15DE figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:0AX8NRY6Rq+4s/WjLLpM7i+N2Uw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P32899 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689374|imex:IM-25795-589 author score:0.78 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) - crc64:9278BF873834FC7E crc64:2CA16A3425691DBD figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rigid:bB4jfzZzkxbcddzxEErkTtterK0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:Q04217 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-1820|ensemblfungi:YMR128W|uniprotkb:D6VZV1 psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:dhr1_yeast(display_long)|uniprotkb:ECM16(gene name)|psi-mi:ECM16(display_short)|uniprotkb:DHR1(gene name synonym)|uniprotkb:YMR128W(locus name)|uniprotkb:YM9553.04(orf name)|uniprotkb:DEAH box RNA helicase DHR1(gene name synonym)|uniprotkb:Extracellular mutant protein 16(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689362|imex:IM-25795-185 author score:0.78 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) ensemblfungi:YMR128W(gene)|ensemblfungi:YMR128W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|rcsb pdb:6H57|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_013847.1|sgd:S000004735|dip:DIP-6722N|mint:Q04217|ensembl:YMR128W(identity) - crc64:9A2B5C885493D7D3 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:UN6v3h4OiKlKuYfkyy/fHqmkri8559292 rigid:8pKYkW+InTNzDyPr+T2wBd3T6sA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P53317 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689350|imex:IM-25795-401 author score:0.78 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) - crc64:9A2B5C885493D7D3 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rigid:ed1rYmvfxffuqYeHw7Xr41+8+Zc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P20448 uniprotkb:P20448 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689338|imex:IM-25795-587 author score:0.78 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rigid:bSF2gsdmYDSRwWHPhvM85SniEWI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47083 uniprotkb:P40498 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689326|imex:IM-25795-491 author score:0.78 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - crc64:DEAF52FC003A0FFD - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:9DrwKV3Eb089ayByGukz3jyaV2k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40079 uniprotkb:P40362 intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689314|imex:IM-25795-585 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:77B7F3F126036489 crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:0Sg5e6O2Tj7AyjljW48QjNOcfkQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:Q04500 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-27917|uniprotkb:D6W0J2|ensemblfungi:YML093W psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:utp14_yeast(display_long)|uniprotkb:YML093W(locus name)|uniprotkb:U three protein 14(gene name synonym)|uniprotkb:UTP14(gene name)|psi-mi:UTP14(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689302|imex:IM-25795-583 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_013617.1|sgd:S000004558|dip:DIP-6410N|mint:Q04500|ensemblfungi:YML093W(gene)|ensemblfungi:YML093W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR006709(Small-subunit processome, Utp14)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YML093W(identity) - crc64:AAFA78B5F6215D89 crc64:0D4FC90D1CB3CFF1 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:qK1PLcsc58zlpaWpK/18rTqXH/Q559292 rigid:GTVQDjwGCpLQtQlcfPCTk509+lg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:Q05946 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-34702|uniprotkb:D6VYM2|ensemblfungi:YLR222C psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:utp13_yeast(display_long)|uniprotkb:UTP13(gene name)|psi-mi:UTP13(display_short)|uniprotkb:U three protein 13(gene name synonym)|uniprotkb:YLR222C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689290|imex:IM-25795-489 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) refseq:NP_013323.1|sgd:S000004212|mint:Q05946|dip:DIP-4790N|ensemblfungi:YLR222C(gene)|ensemblfungi:YLR222C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR013934(Small-subunit processome, Utp13)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR222C(identity) - crc64:60FD2E0E1B3B79B3 crc64:A3DEA4288917027D figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:ODH5ePQUIivfhIrcLu9OwoWowI8559292 rigid:xm/S6qB3yhQlAQHTox8c2Y0RTAI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P15646 uniprotkb:P27476 intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W intact:EBI-12274|ensemblfungi:YGR159C|uniprotkb:D6VUT9 psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:nsr1_yeast(display_long)|uniprotkb:NSR1(gene name)|psi-mi:NSR1(display_short)|uniprotkb:YGR159C(locus name)|uniprotkb:G7001(orf name)|uniprotkb:p67(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689278|imex:IM-25795-789 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL014W(identity) ensemblfungi:YGR159C(gene)|ensemblfungi:YGR159C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034276|interpro:IPR035979|interpro:IPR034272|refseq:NP_011675.1|sgd:S000003391|mint:P27476|dip:DIP-5537N|ensembl:YGR159C(identity) - crc64:56A8B958A7B6066E crc64:90DEEE7BBC20BC0C figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 rogid:q0/AgJC55iTpn/5kCsxal2kQ7Ls559292 rigid:2sEdsPMrbmry2lUdAx6UMuglIew false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:Q12099 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-6776|uniprotkb:D6VS07|ensemblfungi:YDR021W psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:fal1_yeast(display_long)|uniprotkb:FAL1(gene name)|psi-mi:FAL1(display_short)|uniprotkb:YDR021W(locus name)|uniprotkb:YD9335.07(orf name)|uniprotkb:PZC399(orf name)|uniprotkb:Translation initiation factor four A-like protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689266|imex:IM-25795-703 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_010304.3|sgd:S000002428|dip:DIP-4516N|mint:Q12099|ensemblfungi:YDR021W(gene)|ensemblfungi:YDR021W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097078"(FAL1-SGD1 complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-429947|reactome:R-SCE-975957|ensembl:YDR021W(identity) - crc64:AAFA78B5F6215D89 crc64:76A3441728D21253 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:DpSu5iJlZBXbp7bqquc7csKCN+Y559292 rigid:r9ln6rdeQWPglBwXoMvjs5BHz0o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P38719 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-5633|uniprotkb:D3DLB8|ensemblfungi:YHR169W psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:dbp8_yeast(display_long)|uniprotkb:YHR169W(locus name)|uniprotkb:DBP8(gene name)|psi-mi:DBP8(display_short)|uniprotkb:DEAD box protein 8(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689254|imex:IM-25795-313 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_012039.1|sgd:S000001212|dip:DIP-5628N|mint:P38719|ensemblfungi:YHR169W(gene)|ensemblfungi:YHR169W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YHR169W(identity) - crc64:AAFA78B5F6215D89 crc64:B0451EB85247372C figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:mnaGKGPAjFq7/Xfe7pSa0B4LEVE559292 rigid:vxo/B1XtVz56JBipiryy2IciA2o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q05498 uniprotkb:P43639 intact:EBI-30765|uniprotkb:D6VSX1|ensemblfungi:YDR339C intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:fcf1_yeast(display_long)|uniprotkb:FAF1-copurifying factor 1(gene name synonym)|uniprotkb:FCF1(gene name)|psi-mi:FCF1(display_short)|uniprotkb:D9651.9(orf name)|uniprotkb:YDR339C(locus name) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689242|imex:IM-25795-311 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010626.1|sgd:S000002747|reactome:R-SCE-6791226|dip:DIP-6627N|ensemblfungi:YDR339C(gene)|ensemblfungi:YDR339C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002716(PilT protein, N-terminal)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|interpro:IPR037503|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YDR339C(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:0089AD246BA08473 crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vXv6E9iWmq4OoPoF1JmK/LyE5G8559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:mbWYBwXHGJws4TeLZolgxJ7sMeI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04305 uniprotkb:P43639 intact:EBI-28183|uniprotkb:D6VZR6|ensemblfungi:YMR093W intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:utp15_yeast(display_long)|uniprotkb:U three protein 15(gene name synonym)|uniprotkb:U3 protein 15 required for transcription(gene name synonym)|uniprotkb:YM9582.18(orf name)|uniprotkb:YMR093W(locus name)|uniprotkb:UTP15(gene name)|psi-mi:UTP15(display_short)|uniprotkb:t-UTP15(gene name synonym) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689230|imex:IM-25795-309 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013811.1|sgd:S000004699|dip:DIP-1962N|mint:Q04305|ensemblfungi:YMR093W(gene)|ensemblfungi:YMR093W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018983|interpro:IPR019775|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YMR093W(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:2B74BA8BD496C8DA crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:4DswftRHSsPlKxMEIH1VnCc98r8559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:iwKwNS1AiMVafIoV7PbBnaqv7j0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P34247 uniprotkb:P43639 intact:EBI-20162|uniprotkb:D6VXI8|ensemblfungi:YKL099C intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:utp11_yeast(display_long)|uniprotkb:UTP11(gene name)|psi-mi:UTP11(display_short)|uniprotkb:YKL099C(locus name)|uniprotkb:YKL449(orf name)|uniprotkb:U three protein 11(gene name synonym) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689218|imex:IM-25795-385 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012823.2|sgd:S000001582|reactome:R-SCE-6791226|ensemblfungi:YKL099C(gene)|ensemblfungi:YKL099C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0006364"(rRNA processing)|go:"GO:0006412"(translation)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007144(Small-subunit processome, Utp11)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|dip:DIP-6569N|ensembl:YKL099C(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:AA013651708C4DB6 crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vMwGUuqsRuE9MZMert1+O6QTWak559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:spmjBUogOlJ68GBjNV+andghqG8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12481 uniprotkb:P43639 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689206|imex:IM-25795-701 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - - crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:ROFmaWPIXrAEtuvgLsjmILS1xm8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40079 uniprotkb:P15790 intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689194|imex:IM-25795-383 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:77B7F3F126036489 crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:LSRqp3ILXvBO5JLLQidjVtMMubM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:Q02354 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689182|imex:IM-25795-55 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - crc64:7A7F964E2C7FD056 crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:gYBnc3F4voEWw9VKyg1NPWZapDI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40055 uniprotkb:Q04177 intact:EBI-22597|uniprotkb:D3DLY9|ensemblfungi:YER082C intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:utp7_yeast(display_long)|uniprotkb:UTP7(gene name)|psi-mi:UTP7(display_short)|uniprotkb:KRE31(gene name synonym)|uniprotkb:U three protein 7(gene name synonym)|uniprotkb:YER082C(locus name) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689170|imex:IM-25795-183 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011005.1|sgd:S000000884|dip:DIP-5398N|mint:P40055|ensemblfungi:YER082C(gene)|ensemblfungi:YER082C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|interpro:IPR001680(WD40 repeat)|interpro:IPR012952(BING4, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR036322|interpro:IPR040315|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YER082C(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - crc64:A254AD9AC1142AA5 crc64:7A6F60C7C6F46C2A figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:2uFPq4stCHLw5niaXwAZ/7rXjdQ559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:aOSkfjgWiHWPFGZtcfNgCMp556E false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:Q99207 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689158|imex:IM-25795-487 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - crc64:AAFA78B5F6215D89 crc64:F7615D96B02E15DE figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:VrjPpJnX9ke/WovtrXk/Q0q8MUM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:Q04500 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-27917|uniprotkb:D6W0J2|ensemblfungi:YML093W psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:utp14_yeast(display_long)|uniprotkb:YML093W(locus name)|uniprotkb:U three protein 14(gene name synonym)|uniprotkb:UTP14(gene name)|psi-mi:UTP14(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689146|imex:IM-25795-53 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) refseq:NP_013617.1|sgd:S000004558|dip:DIP-6410N|mint:Q04500|ensemblfungi:YML093W(gene)|ensemblfungi:YML093W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR006709(Small-subunit processome, Utp14)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YML093W(identity) - crc64:60FD2E0E1B3B79B3 crc64:0D4FC90D1CB3CFF1 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:qK1PLcsc58zlpaWpK/18rTqXH/Q559292 rigid:baZu8wLPqypUAbojWzcZsKPz28E false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:Q04500 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-27917|uniprotkb:D6W0J2|ensemblfungi:YML093W psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:utp14_yeast(display_long)|uniprotkb:YML093W(locus name)|uniprotkb:U three protein 14(gene name synonym)|uniprotkb:UTP14(gene name)|psi-mi:UTP14(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689134|imex:IM-25795-691 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_013617.1|sgd:S000004558|dip:DIP-6410N|mint:Q04500|ensemblfungi:YML093W(gene)|ensemblfungi:YML093W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR006709(Small-subunit processome, Utp14)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YML093W(identity) - crc64:9278BF873834FC7E crc64:0D4FC90D1CB3CFF1 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:qK1PLcsc58zlpaWpK/18rTqXH/Q559292 rigid:CTGfcADAs+7+T/JEfH7aEO4mbpw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P20448 uniprotkb:Q04500 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-27917|uniprotkb:D6W0J2|ensemblfungi:YML093W psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:utp14_yeast(display_long)|uniprotkb:YML093W(locus name)|uniprotkb:U three protein 14(gene name synonym)|uniprotkb:UTP14(gene name)|psi-mi:UTP14(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689122|imex:IM-25795-689 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_013617.1|sgd:S000004558|dip:DIP-6410N|mint:Q04500|ensemblfungi:YML093W(gene)|ensemblfungi:YML093W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR006709(Small-subunit processome, Utp14)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YML093W(identity) - - crc64:0D4FC90D1CB3CFF1 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:qK1PLcsc58zlpaWpK/18rTqXH/Q559292 rigid:JqcHWJb9byFOuCsHPUdgmPANkVM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06512 uniprotkb:Q06132 intact:EBI-36459|uniprotkb:D6W4E1|ensemblfungi:YPR144C intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:noc4_yeast(display_long)|uniprotkb:NOC4(gene name)|psi-mi:NOC4(display_short)|uniprotkb:UTP19(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 19(gene name synonym)|uniprotkb:U three protein 19(gene name synonym)|uniprotkb:YPR144C(locus name) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689110|imex:IM-25795-181 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015470.1|sgd:S000006348|mint:Q06512|dip:DIP-4555N|ensemblfungi:YPR144C(gene)|ensemblfungi:YPR144C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR005612(CBF)|interpro:IPR027193|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPR144C(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - - crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:M+Te42uFKtlIFUYnsmPmKzkSCZw559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:SKupebwWg4a1MykSoJJqFTOSmSE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38712 uniprotkb:P40079 intact:EBI-16007|uniprotkb:Q6TQT5|uniprotkb:Q6TQT6|ensemblfungi:YHR065C|uniprotkb:D3DL14 intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W psi-mi:rrp3_yeast(display_long)|uniprotkb:RRP3(gene name)|psi-mi:RRP3(display_short)|uniprotkb:Ribosomal RNA-processing protein 3(gene name synonym)|uniprotkb:YHR065C(locus name) psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689098|imex:IM-25795-485 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011932.2|sgd:S000001107|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR044765|reactome:R-SCE-6791226|ensemblfungi:YHR065C(gene)|ensemblfungi:YHR065C_mRNA(transcript)|dip:DIP-6533N|mint:P38712|ensembl:YHR065C(identity) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) - crc64:AA17798E0897272F crc64:77B7F3F126036489 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:EDMS6kbydKXX1fn1HN5qH26h7oE559292 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rigid:0vNiDkZM7J6PXpEE98sHdi4EJGA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40055 uniprotkb:P15790 intact:EBI-22597|uniprotkb:D3DLY9|ensemblfungi:YER082C intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:utp7_yeast(display_long)|uniprotkb:UTP7(gene name)|psi-mi:UTP7(display_short)|uniprotkb:KRE31(gene name synonym)|uniprotkb:U three protein 7(gene name synonym)|uniprotkb:YER082C(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689086|imex:IM-25795-787 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011005.1|sgd:S000000884|dip:DIP-5398N|mint:P40055|ensemblfungi:YER082C(gene)|ensemblfungi:YER082C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|interpro:IPR001680(WD40 repeat)|interpro:IPR012952(BING4, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR036322|interpro:IPR040315|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YER082C(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:A254AD9AC1142AA5 crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:2uFPq4stCHLw5niaXwAZ/7rXjdQ559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:G5tt61kGC9ysVfLUZlredGo/fNw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12481 uniprotkb:P15790 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689074|imex:IM-25795-307 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - - crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:hsXWbVr0n5lhxPA6YELobVzA37k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:P15790 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689062|imex:IM-25795-51 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:7A7F964E2C7FD056 crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:c8eHPEe2pFU0CV3G+Jqupt+5ACA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P20448 uniprotkb:P15790 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689050|imex:IM-25795-49 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - - crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:PTfVqPWlYEi9XpEyZVEH96r8nlo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:Q12136 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689038|imex:IM-25795-173 author score:0.76 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:60FD2E0E1B3B79B3 crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:KpuzxdO5ST9bP0SGKIUEDkgxcV4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53335 uniprotkb:P53335 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689026|imex:IM-25795-687 author score:0.76 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) - crc64:D5AB6EB2C129922D crc64:D5AB6EB2C129922D figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rigid:EsJRoYREc0+Kb8E1Uxg5M3iKHXE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53317 uniprotkb:P15790 intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689494|imex:IM-25795-501 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - - crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:OXB6o1SCOOkKGhJrKIU8GEVl/k0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04305 uniprotkb:Q04177 intact:EBI-28183|uniprotkb:D6VZR6|ensemblfungi:YMR093W intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:utp15_yeast(display_long)|uniprotkb:U three protein 15(gene name synonym)|uniprotkb:U3 protein 15 required for transcription(gene name synonym)|uniprotkb:YM9582.18(orf name)|uniprotkb:YMR093W(locus name)|uniprotkb:UTP15(gene name)|psi-mi:UTP15(display_short)|uniprotkb:t-UTP15(gene name synonym) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690117|imex:IM-25795-609 author score:0.85 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013811.1|sgd:S000004699|dip:DIP-1962N|mint:Q04305|ensemblfungi:YMR093W(gene)|ensemblfungi:YMR093W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018983|interpro:IPR019775|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YMR093W(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - crc64:2B74BA8BD496C8DA crc64:7A6F60C7C6F46C2A figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:4DswftRHSsPlKxMEIH1VnCc98r8559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:4zZI81niKTuzRLCEFC6a0xGnVZ8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06078 uniprotkb:Q12136 intact:EBI-359|uniprotkb:D6VZ43|ensemblfungi:YLR409C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:utp21_yeast(display_long)|uniprotkb:YLR409C(locus name)|uniprotkb:L8084.22(orf name)|uniprotkb:UTP21(gene name)|psi-mi:UTP21(display_short)|uniprotkb:U three protein 21(gene name synonym) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690105|imex:IM-25795-719 author score:0.85 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004401|refseq:NP_013513.3|dip:DIP-6416N|mint:Q06078|ensemblfungi:YLR409C(gene)|ensemblfungi:YLR409C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR007319(Small-subunit processome, Utp21)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|rcsb pdb:4HNX|rcsb pdb:4NSX|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR409C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:F1F856EF28369351 crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:p8cVdV7LI9hwgOSJSz2SUk+Z6Aw559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:P/mQxhjve29mBLA42NYoJlPNYrk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06078 uniprotkb:Q04177 intact:EBI-359|uniprotkb:D6VZ43|ensemblfungi:YLR409C intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:utp21_yeast(display_long)|uniprotkb:YLR409C(locus name)|uniprotkb:L8084.22(orf name)|uniprotkb:UTP21(gene name)|psi-mi:UTP21(display_short)|uniprotkb:U three protein 21(gene name synonym) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690093|imex:IM-25795-717 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004401|refseq:NP_013513.3|dip:DIP-6416N|mint:Q06078|ensemblfungi:YLR409C(gene)|ensemblfungi:YLR409C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR007319(Small-subunit processome, Utp21)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|rcsb pdb:4HNX|rcsb pdb:4NSX|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR409C(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - crc64:F1F856EF28369351 crc64:7A6F60C7C6F46C2A figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:p8cVdV7LI9hwgOSJSz2SUk+Z6Aw559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:ToCeU0AaCE8D7DNi0NeHx1quNQ0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:Q02354 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690081|imex:IM-25795-75 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - - crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:KjGuMGi/QtRDdPGmsT45WeiIPqY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:Q04177 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690069|imex:IM-25795-335 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - - crc64:7A6F60C7C6F46C2A figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:G4j63D0W2WT1mbjmLZcgOoCYtBY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40079 uniprotkb:Q04177 intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690057|imex:IM-25795-815 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - crc64:77B7F3F126036489 crc64:7A6F60C7C6F46C2A figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:giogzj/0S23hiITsGwjY03s9VEs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:Q04177 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690045|imex:IM-25795-715 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - crc64:AAFA78B5F6215D89 crc64:7A6F60C7C6F46C2A figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:WeTxTYRZQ3gIsZGKbwywWNltC4k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:P40498 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690033|imex:IM-25795-333 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:cUaQKFsLPFYynraw6Um5M/+0PYU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12481 uniprotkb:P40498 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690021|imex:IM-25795-73 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:7kV1IydqW80tgp5SXvhvpNSeNGE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53866 uniprotkb:P40498 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690009|imex:IM-25795-513 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:7ZvIF5fhd4J0+u/KKP5zwGlUe18 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40079 uniprotkb:P40498 intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689997|imex:IM-25795-71 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - crc64:77B7F3F126036489 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:Lt188SJrLSooNAPAlV7kjk1qevM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:P40498 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689985|imex:IM-25795-69 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - crc64:5F38B88CDEEFC01F - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:emL/zBj3vKsi/cJ7L11xcy7sNZ8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P40498 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689973|imex:IM-25795-607 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - crc64:AAFA78B5F6215D89 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:v85TmG/ySr4HFF1kiuX1rubEGnI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25368 uniprotkb:P53254 intact:EBI-16019|uniprotkb:D6VQY4|ensemblfungi:YCL031C intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:rrp7_yeast(display_long)|uniprotkb:RRP7(gene name)|psi-mi:RRP7(display_short)|uniprotkb:YCL184(orf name)|uniprotkb:YCL31C(orf name)|uniprotkb:YCL031C(locus name) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689961|imex:IM-25795-713 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009899.1|sgd:S000000536|interpro:IPR040446|interpro:IPR040447|rcsb pdb:2MBY|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YCL031C(gene)|ensemblfungi:YCL031C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR024326|dip:DIP-4974N|mint:P25368|ensembl:YCL031C(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - crc64:768F43B0057788F2 crc64:9A2B5C885493D7D3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:fovz4jwoSdxp4Yh7KCDYpv3f0mc559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:IT1nRY6ODuY9yxj2KQpRSW7nxU4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:Q99207 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689949|imex:IM-25795-193 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - crc64:5F38B88CDEEFC01F crc64:F7615D96B02E15DE figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:8TBdeH25TusseL7ge8OowEexFxs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P40362 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689937|imex:IM-25795-67 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:9278BF873834FC7E crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:EQWl02qyR5tsOZrPS5WIX41HYHU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:P40362 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689925|imex:IM-25795-65 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:7A7F964E2C7FD056 crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:VtoUtSx5sF0cxIbNqAIvJ/znTxY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53914 uniprotkb:P40362 intact:EBI-28914|uniprotkb:D6W150|ensemblfungi:YNL132W intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:nat10_yeast(display_long)|uniprotkb:KRE33(gene name)|psi-mi:KRE33(display_short)|uniprotkb:18S rRNA cytosine acetyltransferase(gene name synonym)|uniprotkb:Killer toxin-resistance protein 33(gene name synonym)|uniprotkb:NAT10(gene name synonym)|uniprotkb:RRA1(gene name synonym)|uniprotkb:Ribosomal RNA cytidine acetyltransferase 1(gene name synonym)|uniprotkb:N1216(orf name)|uniprotkb:N1858(orf name)|uniprotkb:YNL132W(locus name) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689913|imex:IM-25795-63 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014267.1|sgd:S000005076|dip:DIP-6588N|mint:P53914|ensemblfungi:YNL132W(gene)|ensemblfungi:YNL132W_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0016556"(mRNA modification)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0051391"(tRNA acetylation)|go:"GO:1904812"(rRNA acetylation involved in maturation of SSU-rRNA)|go:"GO:1990883"(rRNA cytidine N-acetyltransferase activity)|interpro:IPR000182(GCN5-related N-acetyltransferase)|interpro:IPR007807(Protein of unknown function DUF699, ATPase putative)|interpro:IPR013562(Region of unknown function DUF1726)|interpro:IPR027992|interpro:IPR032672|interpro:IPR033688|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|ensembl:YNL132W(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:76721ED0867ED618 crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:mtIY2LZRAJTtaBBydvREm22cVCA559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:gr9GpxviTvF2rwtwcCXk8a8uo+k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P40362 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689901|imex:IM-25795-409 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:AAFA78B5F6215D89 crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:7uQggD0r5Grv1AVnG5O6yj8giG4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53317 uniprotkb:P40362 intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689889|imex:IM-25795-711 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - - crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:RnO01ks7FkmCGjqFtdsQ5fSu4Ys false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06512 uniprotkb:P42945 intact:EBI-36459|uniprotkb:D6W4E1|ensemblfungi:YPR144C intact:EBI-1884|uniprotkb:D6VW75|ensemblfungi:YJL109C psi-mi:noc4_yeast(display_long)|uniprotkb:NOC4(gene name)|psi-mi:NOC4(display_short)|uniprotkb:UTP19(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 19(gene name synonym)|uniprotkb:U three protein 19(gene name synonym)|uniprotkb:YPR144C(locus name) psi-mi:utp10_yeast(display_long)|uniprotkb:UTP10(gene name)|psi-mi:UTP10(display_short)|uniprotkb:t-UTP10(gene name synonym)|uniprotkb:U three protein 10(gene name synonym)|uniprotkb:U3 protein 10 required for transcription(gene name synonym)|uniprotkb:J0808(orf name)|uniprotkb:YJL109C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689877|imex:IM-25795-407 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015470.1|sgd:S000006348|mint:Q06512|dip:DIP-4555N|ensemblfungi:YPR144C(gene)|ensemblfungi:YPR144C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR005612(CBF)|interpro:IPR027193|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPR144C(identity) refseq:NP_012426.1|sgd:S000003645|dip:DIP-6466N|mint:P42945|ensemblfungi:YJL109C(gene)|ensemblfungi:YJL109C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012954(BP28, C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR022125|interpro:IPR040191|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL109C(identity) - - crc64:064480D1D249B241 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:M+Te42uFKtlIFUYnsmPmKzkSCZw559292 rogid:c7sxmixQnRLFmjuUMDkqZ260ebg559292 rigid:dxPRfyVFh6FrzOz5qK8dN65FQkk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:Q06132 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689865|imex:IM-25795-813 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:9278BF873834FC7E crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:j8YgE6KOv9NTYxXu/dqjAUUrrYA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47083 uniprotkb:Q06132 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689853|imex:IM-25795-811 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:DEAF52FC003A0FFD crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:IA6iS5bnUmobTqYMCmJq3Tx3AV8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:Q06132 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689841|imex:IM-25795-809 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:5F38B88CDEEFC01F crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:rKz4P0MIX6uEEG+aXzUbn9efmpM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:Q06132 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689829|imex:IM-25795-191 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:AAFA78B5F6215D89 crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:gMaLsVRGO0qlLzVc0QJJSrB/xVw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:Q12481 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689817|imex:IM-25795-807 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) - crc64:5F38B88CDEEFC01F - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rigid:bDnKvUddQOBdhKU88QVACIAd2kY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:P53131 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689805|imex:IM-25795-709 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|ensembl:YGL120C(identity) - crc64:5F38B88CDEEFC01F crc64:DA8A085EC50FF430 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rigid:UC68lg+KqoDUs3I6ynr7e9cVwgw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:P53866 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689793|imex:IM-25795-331 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:60FD2E0E1B3B79B3 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:Tir9h87lqk5qDhWp7h5kaf6lrUI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12460 uniprotkb:P27476 intact:EBI-17148|ensemblfungi:YLR197W|uniprotkb:D6VYK0 intact:EBI-12274|ensemblfungi:YGR159C|uniprotkb:D6VUT9 psi-mi:nop56_yeast(display_long)|uniprotkb:SIK1(gene name synonym)|uniprotkb:Ribosome biosynthesis protein SIK1(gene name synonym)|uniprotkb:YLR197W(locus name)|uniprotkb:L8167.9(orf name)|uniprotkb:NOP56(gene name)|psi-mi:NOP56(display_short)|uniprotkb:Suppressor of I kappa b protein 1(gene name synonym) psi-mi:nsr1_yeast(display_long)|uniprotkb:NSR1(gene name)|psi-mi:NSR1(display_short)|uniprotkb:YGR159C(locus name)|uniprotkb:G7001(orf name)|uniprotkb:p67(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689781|imex:IM-25795-329 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YLR197W(gene)|ensemblfungi:YLR197W_mRNA(transcript)|go:"GO:0000154"(rRNA modification)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|refseq:NP_013298.1|sgd:S000004187|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-4405N|mint:Q12460|ensembl:YLR197W(identity) ensemblfungi:YGR159C(gene)|ensemblfungi:YGR159C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034276|interpro:IPR035979|interpro:IPR034272|refseq:NP_011675.1|sgd:S000003391|mint:P27476|dip:DIP-5537N|ensembl:YGR159C(identity) - crc64:F8522A5870EF4842 crc64:90DEEE7BBC20BC0C figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:l3UAmoOUECH1uov6nv7MSwSv/3s559292 rogid:q0/AgJC55iTpn/5kCsxal2kQ7Ls559292 rigid:TroFDrvRyr3H23qub98WP5VAdGk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:P27476 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-12274|ensemblfungi:YGR159C|uniprotkb:D6VUT9 psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:nsr1_yeast(display_long)|uniprotkb:NSR1(gene name)|psi-mi:NSR1(display_short)|uniprotkb:YGR159C(locus name)|uniprotkb:G7001(orf name)|uniprotkb:p67(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689769|imex:IM-25795-511 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) ensemblfungi:YGR159C(gene)|ensemblfungi:YGR159C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034276|interpro:IPR035979|interpro:IPR034272|refseq:NP_011675.1|sgd:S000003391|mint:P27476|dip:DIP-5537N|ensembl:YGR159C(identity) - crc64:5F38B88CDEEFC01F crc64:90DEEE7BBC20BC0C figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:q0/AgJC55iTpn/5kCsxal2kQ7Ls559292 rigid:N8g1K4ApaTLQOlSJgXPH0X/yPt0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:P25586 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689757|imex:IM-25795-61 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) - crc64:5F38B88CDEEFC01F crc64:7A7F964E2C7FD056 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rigid:v3oBu2cuUa1gNAiXhE31+TdElK0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40079 uniprotkb:Q12099 intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W intact:EBI-6776|uniprotkb:D6VS07|ensemblfungi:YDR021W psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:fal1_yeast(display_long)|uniprotkb:FAL1(gene name)|psi-mi:FAL1(display_short)|uniprotkb:YDR021W(locus name)|uniprotkb:YD9335.07(orf name)|uniprotkb:PZC399(orf name)|uniprotkb:Translation initiation factor four A-like protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689745|imex:IM-25795-405 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) refseq:NP_010304.3|sgd:S000002428|dip:DIP-4516N|mint:Q12099|ensemblfungi:YDR021W(gene)|ensemblfungi:YDR021W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097078"(FAL1-SGD1 complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-429947|reactome:R-SCE-975957|ensembl:YDR021W(identity) - crc64:77B7F3F126036489 crc64:76A3441728D21253 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rogid:DpSu5iJlZBXbp7bqquc7csKCN+Y559292 rigid:mnKLEWsjuH+ug1gi1xeL/57aZN4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53335 uniprotkb:Q12099 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C intact:EBI-6776|uniprotkb:D6VS07|ensemblfungi:YDR021W psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:fal1_yeast(display_long)|uniprotkb:FAL1(gene name)|psi-mi:FAL1(display_short)|uniprotkb:YDR021W(locus name)|uniprotkb:YD9335.07(orf name)|uniprotkb:PZC399(orf name)|uniprotkb:Translation initiation factor four A-like protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689733|imex:IM-25795-509 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) refseq:NP_010304.3|sgd:S000002428|dip:DIP-4516N|mint:Q12099|ensemblfungi:YDR021W(gene)|ensemblfungi:YDR021W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097078"(FAL1-SGD1 complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-429947|reactome:R-SCE-975957|ensembl:YDR021W(identity) - crc64:D5AB6EB2C129922D crc64:76A3441728D21253 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rogid:DpSu5iJlZBXbp7bqquc7csKCN+Y559292 rigid:uUMNW4EFZuAAMvnIO4MxDn9EBjg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P38333 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689721|imex:IM-25795-327 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - crc64:9A2B5C885493D7D3 crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:ETiniCsVkLMWgBPyiXjrbpqTJy8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06078 uniprotkb:P38333 intact:EBI-359|uniprotkb:D6VZ43|ensemblfungi:YLR409C intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:utp21_yeast(display_long)|uniprotkb:YLR409C(locus name)|uniprotkb:L8084.22(orf name)|uniprotkb:UTP21(gene name)|psi-mi:UTP21(display_short)|uniprotkb:U three protein 21(gene name synonym) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689709|imex:IM-25795-403 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004401|refseq:NP_013513.3|dip:DIP-6416N|mint:Q06078|ensemblfungi:YLR409C(gene)|ensemblfungi:YLR409C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR007319(Small-subunit processome, Utp21)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|rcsb pdb:4HNX|rcsb pdb:4NSX|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR409C(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - crc64:F1F856EF28369351 crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:p8cVdV7LI9hwgOSJSz2SUk+Z6Aw559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:eeJJLK7XwMFHp2fjd/88OqBrnJc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53941 uniprotkb:P38333 intact:EBI-9243|ensemblfungi:YNL075W|uniprotkb:D6W1A4 intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:imp4_yeast(display_long)|uniprotkb:IMP4(gene name)|psi-mi:IMP4(display_short)|uniprotkb:YNL075W(locus name)|uniprotkb:N2353(orf name)|uniprotkb:Interacting with MPP10 protein 4(gene name synonym) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689697|imex:IM-25795-59 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YNL075W(gene)|ensemblfungi:YNL075W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|sgd:S000005019|refseq:NP_014324.3|reactome:R-SCE-6791226|dip:DIP-4362N|ensembl:YNL075W(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - - crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vbv+Sx/noAJOmIh7OYonw2J9ckI559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:NPT/uYwpQ0Af+A+G0LSyzNC2y3k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32899 uniprotkb:P38333 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689685|imex:IM-25795-805 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - crc64:2CA16A3425691DBD crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:XUIymDzC+VxXWyMYbdPYOfNgqsY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P38333 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689673|imex:IM-25795-507 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - crc64:AAFA78B5F6215D89 crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:YL5aI0XUJeN1QFyqrHzP8FmDo88 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:P53317 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689661|imex:IM-25795-325 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) - crc64:5F38B88CDEEFC01F - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rigid:9QRMORWdID6eSUnzmIaolTjk53s false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:P43639 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689649|imex:IM-25795-605 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:60FD2E0E1B3B79B3 crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:0vgwixZBNXcfQFMxzY9qujbGJk0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P43639 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689637|imex:IM-25795-707 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:9A2B5C885493D7D3 crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:kbx31XkuvBO0EgDc8wHQwaaKFTI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06078 uniprotkb:P43639 intact:EBI-359|uniprotkb:D6VZ43|ensemblfungi:YLR409C intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:utp21_yeast(display_long)|uniprotkb:YLR409C(locus name)|uniprotkb:L8084.22(orf name)|uniprotkb:UTP21(gene name)|psi-mi:UTP21(display_short)|uniprotkb:U three protein 21(gene name synonym) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689625|imex:IM-25795-323 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004401|refseq:NP_013513.3|dip:DIP-6416N|mint:Q06078|ensemblfungi:YLR409C(gene)|ensemblfungi:YLR409C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR007319(Small-subunit processome, Utp21)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|rcsb pdb:4HNX|rcsb pdb:4NSX|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR409C(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:F1F856EF28369351 crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:p8cVdV7LI9hwgOSJSz2SUk+Z6Aw559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:1X+vdV68ue7+5rH7wQeWnvCXK6w false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:P43639 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689613|imex:IM-25795-189 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - - crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:LgTgb631m4yLuZGzI0wlep8VR3I false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:P43639 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689601|imex:IM-25795-505 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:7A7F964E2C7FD056 crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:uttW9+nbqXdsaiRXDLQjnebK6w4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32899 uniprotkb:P43639 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689589|imex:IM-25795-321 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:2CA16A3425691DBD crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:j/wqGzUmy0RDJuMLF9cs+r/A+a4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P43639 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689577|imex:IM-25795-803 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:AAFA78B5F6215D89 crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:DAPM4P2Z3FnxhL/gdbXp6Xyg9nE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53317 uniprotkb:P43639 intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689565|imex:IM-25795-319 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - - crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:kckFWTDxXZuaSWdwhW66yl3Loq4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53317 uniprotkb:P19454 intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W intact:EBI-9548|ensemblfungi:YOR061W|uniprotkb:D6W2C4 psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:csk22_yeast(display_long)|uniprotkb:CKA2(gene name)|psi-mi:CKA2(display_short)|uniprotkb:YOR29-12(orf name)|uniprotkb:YOR061W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689553|imex:IM-25795-57 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) ensemblfungi:YOR061W(gene)|ensemblfungi:YOR061W_mRNA(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0071470"(cellular response to osmotic stress)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|refseq:NP_014704.1|sgd:S000005587|mint:P19454|dip:DIP-1038N|ensembl:YOR061W(identity) - - crc64:30E214BD852824D0 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rogid:E39eioYivVEqVSUhL99a2iGvisg559292 rigid:K9qlZi+boVZdJpzWrplHnY58PVU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:P15790 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689541|imex:IM-25795-603 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - - crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:vewhEP11eJIohIv37crDwMzBMk8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32899 uniprotkb:P15790 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16689529|imex:IM-25795-503 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:2CA16A3425691DBD crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:cpnBT434+Eu0VdJuYKUkfEdT8wQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12481 uniprotkb:Q06132 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690548|imex:IM-25795-345 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - - crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:3qKTQcHYqVSpkoh5Q4KuWNVmIXM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06506 uniprotkb:Q06132 intact:EBI-35124|uniprotkb:D6W4D3|ensemblfungi:YPR137W intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:rrp9_yeast(display_long)|uniprotkb:RRP9(gene name)|psi-mi:RRP9(display_short)|uniprotkb:YPR137W(locus name) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690560|imex:IM-25795-83 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015463.1|sgd:S000006341|mint:Q06506|dip:DIP-6537N|ensemblfungi:YPR137W(gene)|ensemblfungi:YPR137W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR039241|rcsb pdb:4J0X|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPR137W(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:96BEAB7DC338E70E crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jcGY4AY3fUm5mEoDKsFxA6nvpQg559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:Gv/LBIEAMbcldTAthbCA2Cr6dgY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53317 uniprotkb:Q06132 intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690524|imex:IM-25795-733 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - - crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:AhuWz44stg848rXipfCWgkas2Uw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P20448 uniprotkb:Q06132 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690512|imex:IM-25795-619 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - - crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:hhx33SyE6rZRRuanwkj4XL49ljo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53866 uniprotkb:P53866 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690500|imex:IM-25795-617 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:J3V7sR8IbA9Pk5ERKgHEG0cy+w4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P25586 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690488|imex:IM-25795-343 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) - crc64:9A2B5C885493D7D3 crc64:7A7F964E2C7FD056 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rigid:maLVhcyLUfDspmvdtbh5eh2H6Fc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:P25586 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690476|imex:IM-25795-525 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) - - crc64:7A7F964E2C7FD056 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rigid:JTejq03pEvQDiLdbt3TTKVA2rF4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P15646 uniprotkb:P25586 intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690464|imex:IM-25795-615 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL014W(identity) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) - crc64:56A8B958A7B6066E crc64:7A7F964E2C7FD056 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rigid:yS7YzszcPWoITNmlYEpOhYvtmUM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:P25586 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690452|imex:IM-25795-821 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) - crc64:7A7F964E2C7FD056 crc64:7A7F964E2C7FD056 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rigid:sDbrVjvpERaLLP1Bwc0hIIgLbVQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P20448 uniprotkb:Q03532 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690440|imex:IM-25795-201 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - - crc64:EE15D51A7F6BE1A2 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:7hKEn0LCSXP0h2CSJtZcxM8UbgY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:Q06344 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690428|imex:IM-25795-341 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) - crc64:9278BF873834FC7E crc64:A16FB043D0ED86B7 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rigid:3cseU8n+NZXPjiHY6g4zPB+sCgw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06344 uniprotkb:Q06344 intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690416|imex:IM-25795-81 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) - crc64:A16FB043D0ED86B7 crc64:A16FB043D0ED86B7 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rigid:yzDqD8B0c5X0Ad3DWSI3wXoe14Y false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P20448 uniprotkb:Q06344 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690404|imex:IM-25795-79 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) - - crc64:A16FB043D0ED86B7 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rigid:DBrijVFgKPdZQVTUFMYIs0DQpuo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P36009 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690392|imex:IM-25795-731 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - crc64:9A2B5C885493D7D3 crc64:AAFA78B5F6215D89 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:XYLQfzWf/yxjRTe+2DYW73QZgXE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53866 uniprotkb:P36009 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690380|imex:IM-25795-199 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - - crc64:AAFA78B5F6215D89 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:WGygC+fXPXRz6vUuFQsWN0+S7LU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04500 uniprotkb:P15790 intact:EBI-27917|uniprotkb:D6W0J2|ensemblfungi:YML093W intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:utp14_yeast(display_long)|uniprotkb:YML093W(locus name)|uniprotkb:U three protein 14(gene name synonym)|uniprotkb:UTP14(gene name)|psi-mi:UTP14(display_short) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690368|imex:IM-25795-523 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013617.1|sgd:S000004558|dip:DIP-6410N|mint:Q04500|ensemblfungi:YML093W(gene)|ensemblfungi:YML093W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR006709(Small-subunit processome, Utp14)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YML093W(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:0D4FC90D1CB3CFF1 crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:qK1PLcsc58zlpaWpK/18rTqXH/Q559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:MfpeTF9H93glUPwYKD3HOrSwiAA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06344 uniprotkb:P15790 intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690356|imex:IM-25795-197 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:A16FB043D0ED86B7 crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:LnQOmbP/p5D83fDQuLYPq/go9T0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40079 uniprotkb:P25635 intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W intact:EBI-14332|uniprotkb:P25633|uniprotkb:P25636|uniprotkb:D6VR63|ensemblfungi:YCR057C psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:pwp2_yeast(display_long)|uniprotkb:PWP2(gene name)|psi-mi:PWP2(display_short)|uniprotkb:UTP1(gene name synonym)|uniprotkb:YCR057C(locus name)|uniprotkb:YCR55C/YCR57C/YCR58C(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 1(gene name synonym)|uniprotkb:U three protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690344|imex:IM-25795-613 author score:0.89 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) go:"GO:0000920"(septum digestion after cytokinesis)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR027145|interpro:IPR036322|rcsb pdb:5I2T|rcsb pdb:5WLC|rcsb pdb:5WYJ|ensemblfungi:YCR057C(gene)|ensemblfungi:YCR057C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:5WYK|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_009984.1|sgd:S000000653|mint:P25635|dip:DIP-1868N|ensembl:YCR057C(identity) - crc64:77B7F3F126036489 crc64:CBEE4720F81378B6 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rogid:3JKhaE50yPlCymnkEC14JB9atNY559292 rigid:bOYDDs/i7EbD0Wugw92VXFldfWQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P15646 uniprotkb:P15646 intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690332|imex:IM-25795-729 author score:0.88 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL014W(identity) refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL014W(identity) - crc64:56A8B958A7B6066E crc64:56A8B958A7B6066E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 rigid:eIdx/SpXC5MrGnJYjBU6pF6+2/E false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q99207 uniprotkb:P53254 intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690320|imex:IM-25795-339 author score:0.87 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - crc64:F7615D96B02E15DE crc64:9A2B5C885493D7D3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:0AX8NRY6Rq+4s/WjLLpM7i+N2Uw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:P53251 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-23221|ensemblfungi:YGR081C psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690308|imex:IM-25795-819 author score:0.87 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rigid:vgYllgtYsfl6ZHY+ZKnBsZH0A9g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53941 uniprotkb:P53251 intact:EBI-9243|ensemblfungi:YNL075W|uniprotkb:D6W1A4 intact:EBI-23221|ensemblfungi:YGR081C psi-mi:imp4_yeast(display_long)|uniprotkb:IMP4(gene name)|psi-mi:IMP4(display_short)|uniprotkb:YNL075W(locus name)|uniprotkb:N2353(orf name)|uniprotkb:Interacting with MPP10 protein 4(gene name synonym) psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690296|imex:IM-25795-521 author score:0.87 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YNL075W(gene)|ensemblfungi:YNL075W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|sgd:S000005019|refseq:NP_014324.3|reactome:R-SCE-6791226|dip:DIP-4362N|ensembl:YNL075W(identity) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vbv+Sx/noAJOmIh7OYonw2J9ckI559292 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rigid:KJYx45T0zgqtr1ucq/RsQd03Tuo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:Q06344 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690284|imex:IM-25795-519 author score:0.87 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) - crc64:9A2B5C885493D7D3 crc64:A16FB043D0ED86B7 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rigid:f6+3JfU6q8CWzVM1bU7osk+ynoM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06132 uniprotkb:Q06344 intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690272|imex:IM-25795-727 author score:0.87 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) - crc64:8EEFDB8258407FF3 crc64:A16FB043D0ED86B7 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rigid:KYL7ad8NbobHD6cGbXV3Jczos+w false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38333 uniprotkb:P38333 intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690260|imex:IM-25795-337 author score:0.87 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - crc64:399A415131294637 crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:DPkvIqVZyGg3uA82ht8ZUVfy4CM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P42945 uniprotkb:P40055 intact:EBI-1884|uniprotkb:D6VW75|ensemblfungi:YJL109C intact:EBI-22597|uniprotkb:D3DLY9|ensemblfungi:YER082C psi-mi:utp10_yeast(display_long)|uniprotkb:UTP10(gene name)|psi-mi:UTP10(display_short)|uniprotkb:t-UTP10(gene name synonym)|uniprotkb:U three protein 10(gene name synonym)|uniprotkb:U3 protein 10 required for transcription(gene name synonym)|uniprotkb:J0808(orf name)|uniprotkb:YJL109C(locus name) psi-mi:utp7_yeast(display_long)|uniprotkb:UTP7(gene name)|psi-mi:UTP7(display_short)|uniprotkb:KRE31(gene name synonym)|uniprotkb:U three protein 7(gene name synonym)|uniprotkb:YER082C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690248|imex:IM-25795-611 author score:0.85 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012426.1|sgd:S000003645|dip:DIP-6466N|mint:P42945|ensemblfungi:YJL109C(gene)|ensemblfungi:YJL109C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012954(BP28, C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR022125|interpro:IPR040191|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL109C(identity) refseq:NP_011005.1|sgd:S000000884|dip:DIP-5398N|mint:P40055|ensemblfungi:YER082C(gene)|ensemblfungi:YER082C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|interpro:IPR001680(WD40 repeat)|interpro:IPR012952(BING4, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR036322|interpro:IPR040315|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YER082C(identity) - crc64:064480D1D249B241 crc64:A254AD9AC1142AA5 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:c7sxmixQnRLFmjuUMDkqZ260ebg559292 rogid:2uFPq4stCHLw5niaXwAZ/7rXjdQ559292 rigid:mpNtUvVg+NbtAdmXxAaccg7FMvw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:Q99207 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690236|imex:IM-25795-725 author score:0.85 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - crc64:60FD2E0E1B3B79B3 crc64:F7615D96B02E15DE figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:4V6QbLMwi7NI+WfzRwjE2XBgBXg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53914 uniprotkb:Q06132 intact:EBI-28914|uniprotkb:D6W150|ensemblfungi:YNL132W intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:nat10_yeast(display_long)|uniprotkb:KRE33(gene name)|psi-mi:KRE33(display_short)|uniprotkb:18S rRNA cytosine acetyltransferase(gene name synonym)|uniprotkb:Killer toxin-resistance protein 33(gene name synonym)|uniprotkb:NAT10(gene name synonym)|uniprotkb:RRA1(gene name synonym)|uniprotkb:Ribosomal RNA cytidine acetyltransferase 1(gene name synonym)|uniprotkb:N1216(orf name)|uniprotkb:N1858(orf name)|uniprotkb:YNL132W(locus name) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690224|imex:IM-25795-517 author score:0.85 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014267.1|sgd:S000005076|dip:DIP-6588N|mint:P53914|ensemblfungi:YNL132W(gene)|ensemblfungi:YNL132W_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0016556"(mRNA modification)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0051391"(tRNA acetylation)|go:"GO:1904812"(rRNA acetylation involved in maturation of SSU-rRNA)|go:"GO:1990883"(rRNA cytidine N-acetyltransferase activity)|interpro:IPR000182(GCN5-related N-acetyltransferase)|interpro:IPR007807(Protein of unknown function DUF699, ATPase putative)|interpro:IPR013562(Region of unknown function DUF1726)|interpro:IPR027992|interpro:IPR032672|interpro:IPR033688|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|ensembl:YNL132W(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:76721ED0867ED618 crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:mtIY2LZRAJTtaBBydvREm22cVCA559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:sd7YTB3WR10PRFjYZCpIB3aC05I false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06344 uniprotkb:P53914 intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C intact:EBI-28914|uniprotkb:D6W150|ensemblfungi:YNL132W psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:nat10_yeast(display_long)|uniprotkb:KRE33(gene name)|psi-mi:KRE33(display_short)|uniprotkb:18S rRNA cytosine acetyltransferase(gene name synonym)|uniprotkb:Killer toxin-resistance protein 33(gene name synonym)|uniprotkb:NAT10(gene name synonym)|uniprotkb:RRA1(gene name synonym)|uniprotkb:Ribosomal RNA cytidine acetyltransferase 1(gene name synonym)|uniprotkb:N1216(orf name)|uniprotkb:N1858(orf name)|uniprotkb:YNL132W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690212|imex:IM-25795-723 author score:0.85 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) refseq:NP_014267.1|sgd:S000005076|dip:DIP-6588N|mint:P53914|ensemblfungi:YNL132W(gene)|ensemblfungi:YNL132W_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0016556"(mRNA modification)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0051391"(tRNA acetylation)|go:"GO:1904812"(rRNA acetylation involved in maturation of SSU-rRNA)|go:"GO:1990883"(rRNA cytidine N-acetyltransferase activity)|interpro:IPR000182(GCN5-related N-acetyltransferase)|interpro:IPR007807(Protein of unknown function DUF699, ATPase putative)|interpro:IPR013562(Region of unknown function DUF1726)|interpro:IPR027992|interpro:IPR032672|interpro:IPR033688|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|ensembl:YNL132W(identity) - crc64:A16FB043D0ED86B7 crc64:76721ED0867ED618 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rogid:mtIY2LZRAJTtaBBydvREm22cVCA559292 rigid:KeoDdWxWmxQMBR+7i94EJ2FYRVA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53914 uniprotkb:Q06344 intact:EBI-28914|uniprotkb:D6W150|ensemblfungi:YNL132W intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C psi-mi:nat10_yeast(display_long)|uniprotkb:KRE33(gene name)|psi-mi:KRE33(display_short)|uniprotkb:18S rRNA cytosine acetyltransferase(gene name synonym)|uniprotkb:Killer toxin-resistance protein 33(gene name synonym)|uniprotkb:NAT10(gene name synonym)|uniprotkb:RRA1(gene name synonym)|uniprotkb:Ribosomal RNA cytidine acetyltransferase 1(gene name synonym)|uniprotkb:N1216(orf name)|uniprotkb:N1858(orf name)|uniprotkb:YNL132W(locus name) psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690200|imex:IM-25795-77 author score:0.85 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014267.1|sgd:S000005076|dip:DIP-6588N|mint:P53914|ensemblfungi:YNL132W(gene)|ensemblfungi:YNL132W_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0016556"(mRNA modification)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0051391"(tRNA acetylation)|go:"GO:1904812"(rRNA acetylation involved in maturation of SSU-rRNA)|go:"GO:1990883"(rRNA cytidine N-acetyltransferase activity)|interpro:IPR000182(GCN5-related N-acetyltransferase)|interpro:IPR007807(Protein of unknown function DUF699, ATPase putative)|interpro:IPR013562(Region of unknown function DUF1726)|interpro:IPR027992|interpro:IPR032672|interpro:IPR033688|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|ensembl:YNL132W(identity) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) - crc64:76721ED0867ED618 crc64:A16FB043D0ED86B7 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:mtIY2LZRAJTtaBBydvREm22cVCA559292 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rigid:KeoDdWxWmxQMBR+7i94EJ2FYRVA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:Q04217 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-1820|ensemblfungi:YMR128W|uniprotkb:D6VZV1 psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:dhr1_yeast(display_long)|uniprotkb:ECM16(gene name)|psi-mi:ECM16(display_short)|uniprotkb:DHR1(gene name synonym)|uniprotkb:YMR128W(locus name)|uniprotkb:YM9553.04(orf name)|uniprotkb:DEAH box RNA helicase DHR1(gene name synonym)|uniprotkb:Extracellular mutant protein 16(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690188|imex:IM-25795-195 author score:0.85 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) ensemblfungi:YMR128W(gene)|ensemblfungi:YMR128W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|rcsb pdb:6H57|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_013847.1|sgd:S000004735|dip:DIP-6722N|mint:Q04217|ensembl:YMR128W(identity) - crc64:9278BF873834FC7E - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:UN6v3h4OiKlKuYfkyy/fHqmkri8559292 rigid:rTJPvmeVv0TxwLeZAIUGovKHzFs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:Q04217 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-1820|ensemblfungi:YMR128W|uniprotkb:D6VZV1 psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:dhr1_yeast(display_long)|uniprotkb:ECM16(gene name)|psi-mi:ECM16(display_short)|uniprotkb:DHR1(gene name synonym)|uniprotkb:YMR128W(locus name)|uniprotkb:YM9553.04(orf name)|uniprotkb:DEAH box RNA helicase DHR1(gene name synonym)|uniprotkb:Extracellular mutant protein 16(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690176|imex:IM-25795-515 author score:0.85 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) ensemblfungi:YMR128W(gene)|ensemblfungi:YMR128W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|rcsb pdb:6H57|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_013847.1|sgd:S000004735|dip:DIP-6722N|mint:Q04217|ensembl:YMR128W(identity) - crc64:AAFA78B5F6215D89 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:UN6v3h4OiKlKuYfkyy/fHqmkri8559292 rigid:H5MQy4zvMYWi3447gPExBsLsGiw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P20448 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690164|imex:IM-25795-411 author score:0.85 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) - crc64:9A2B5C885493D7D3 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rigid:Zle7B9YPzxGT5+k62pTfNApSJvg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06679 uniprotkb:P53276 intact:EBI-35712|uniprotkb:D6VSV7|ensemblfungi:YDR324C intact:EBI-23301|uniprotkb:D6VUR0|ensemblfungi:YGR128C psi-mi:utp4_yeast(display_long)|uniprotkb:UTP4(gene name)|psi-mi:UTP4(display_short)|uniprotkb:t-UTP4(gene name synonym)|uniprotkb:U three protein 4(gene name synonym)|uniprotkb:U3 protein 4 required for transcription(gene name synonym)|uniprotkb:YDR324C(locus name) psi-mi:utp8_yeast(display_long)|uniprotkb:UTP8(gene name)|psi-mi:UTP8(display_short)|uniprotkb:t-UTP8(gene name synonym)|uniprotkb:U three protein 8(gene name synonym)|uniprotkb:U3 protein 8 required for transcription(gene name synonym)|uniprotkb:YGR128C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690152|imex:IM-25795-721 author score:0.85 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010611.3|sgd:S000002732|mint:Q06679|dip:DIP-6436N|ensemblfungi:YDR324C(gene)|ensemblfungi:YDR324C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR324C(identity) sgd:S000003360|refseq:NP_011644.3|dip:DIP-6747N|mint:P53276|ensemblfungi:YGR128C(gene)|ensemblfungi:YGR128C_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR018843|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YGR128C(identity) - crc64:5D1C77899CABB40B crc64:6F5AE1492F841F49 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:kAD4RO628jpcbjUoQXQbjcGVY88559292 rogid:dG2UtBMuPQujwdovAL/FDjpqps0559292 rigid:/wdgF347OTqJCoA5V1cQXG2zx9o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06679 uniprotkb:Q04177 intact:EBI-35712|uniprotkb:D6VSV7|ensemblfungi:YDR324C intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:utp4_yeast(display_long)|uniprotkb:UTP4(gene name)|psi-mi:UTP4(display_short)|uniprotkb:t-UTP4(gene name synonym)|uniprotkb:U three protein 4(gene name synonym)|uniprotkb:U3 protein 4 required for transcription(gene name synonym)|uniprotkb:YDR324C(locus name) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690140|imex:IM-25795-817 author score:0.85 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010611.3|sgd:S000002732|mint:Q06679|dip:DIP-6436N|ensemblfungi:YDR324C(gene)|ensemblfungi:YDR324C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR324C(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - crc64:5D1C77899CABB40B crc64:7A6F60C7C6F46C2A figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:kAD4RO628jpcbjUoQXQbjcGVY88559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:51RlOVAuK+DLAjVB6S4devLuRPQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53317 uniprotkb:P53866 intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690728|imex:IM-25795-351 author score:0.94 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:yLjctFLYAW61nRk9D3QWdIe0Ir4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:P47083 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690716|imex:IM-25795-413 author score:0.94 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:EE15D51A7F6BE1A2 crc64:DEAF52FC003A0FFD figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:eOxUAfq105Yl6HqJbnnAQelYObM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12481 uniprotkb:P25586 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690704|imex:IM-25795-349 author score:0.94 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) - - crc64:7A7F964E2C7FD056 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rigid:3ezMH+TVsApxRbezgmOXA4l01cM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P42945 uniprotkb:Q04177 intact:EBI-1884|uniprotkb:D6VW75|ensemblfungi:YJL109C intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:utp10_yeast(display_long)|uniprotkb:UTP10(gene name)|psi-mi:UTP10(display_short)|uniprotkb:t-UTP10(gene name synonym)|uniprotkb:U three protein 10(gene name synonym)|uniprotkb:U3 protein 10 required for transcription(gene name synonym)|uniprotkb:J0808(orf name)|uniprotkb:YJL109C(locus name) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690692|imex:IM-25795-347 author score:0.93 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012426.1|sgd:S000003645|dip:DIP-6466N|mint:P42945|ensemblfungi:YJL109C(gene)|ensemblfungi:YJL109C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012954(BP28, C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR022125|interpro:IPR040191|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL109C(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - crc64:064480D1D249B241 crc64:7A6F60C7C6F46C2A figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:c7sxmixQnRLFmjuUMDkqZ260ebg559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:9xrA+DSOKT21c23ynPVAmyyEXm8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:Q06078 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-359|uniprotkb:D6VZ43|ensemblfungi:YLR409C psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:utp21_yeast(display_long)|uniprotkb:YLR409C(locus name)|uniprotkb:L8084.22(orf name)|uniprotkb:UTP21(gene name)|psi-mi:UTP21(display_short)|uniprotkb:U three protein 21(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690680|imex:IM-25795-531 author score:0.93 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) sgd:S000004401|refseq:NP_013513.3|dip:DIP-6416N|mint:Q06078|ensemblfungi:YLR409C(gene)|ensemblfungi:YLR409C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR007319(Small-subunit processome, Utp21)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|rcsb pdb:4HNX|rcsb pdb:4NSX|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR409C(identity) - crc64:60FD2E0E1B3B79B3 crc64:F1F856EF28369351 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:p8cVdV7LI9hwgOSJSz2SUk+Z6Aw559292 rigid:ut+DfnZohAPa62tIcIGZ4PYI/aA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q99207 uniprotkb:Q06287 intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C intact:EBI-11979|ensemblfungi:YLR186W|uniprotkb:E9P8U2|uniprotkb:D6VYI9 psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:nep1_yeast(display_long)|uniprotkb:EMG1(gene name)|psi-mi:EMG1(display_short)|uniprotkb:NEP1(gene name synonym)|uniprotkb:YLR186W(locus name)|uniprotkb:L9470.5(orf name)|uniprotkb:Nucleolar essential protein 1(gene name synonym)|uniprotkb:"18S rRNA (pseudouridine(1189)-N1)-methyltransferase"(gene name synonym)|uniprotkb:Essential for mitotic growth protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690668|imex:IM-25795-87 author score:0.93 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005880"(nuclear microtubule)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070037"("rRNA (pseudouridine) methyltransferase activity")|go:"GO:0070475"(rRNA base methylation)|interpro:IPR005304(Suppressor Mra1)|ensemblfungi:YLR186W(gene)|interpro:IPR029026|interpro:IPR029028|rcsb pdb:2V3J|rcsb pdb:2V3K|ensemblfungi:YLR186W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|rcsb pdb:3OIJ|rcsb pdb:3OIN|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:3OII|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|sgd:S000004176|refseq:NP_013287.1|reactome:R-SCE-6791226|dip:DIP-6504N|ensembl:YLR186W(identity) - crc64:F7615D96B02E15DE crc64:4A8FCDA812051AD1 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rogid:z62Fg9aJ4kKGgU5NIlAND2yHGrQ559292 rigid:0TIlGWx8SAzqy1fgBH/Ekl9kC6o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38882 uniprotkb:Q04177 intact:EBI-24892|uniprotkb:D3DLE4|ensemblfungi:YHR196W intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:utp9_yeast(display_long)|uniprotkb:t-UTP9(gene name synonym)|uniprotkb:UTP9(gene name)|psi-mi:UTP9(display_short)|uniprotkb:U three protein 9(gene name synonym)|uniprotkb:U3 protein 9 required for transcription(gene name synonym)|uniprotkb:YHR196W(locus name) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690656|imex:IM-25795-205 author score:0.93 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012066.1|sgd:S000001239|mint:P38882|dip:DIP-6634N|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|ensemblfungi:YHR196W(gene)|ensemblfungi:YHR196W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR015943(WD40/YVTN repeat-like)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|ensembl:YHR196W(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - crc64:0C482C6A32855FF1 crc64:7A6F60C7C6F46C2A figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:cjrwDuKyMEgU0Zgn28yzNi6haV4559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:7gaBKfV0DUFvTicRDFddU4LUct4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P40498 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690644|imex:IM-25795-625 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - crc64:9A2B5C885493D7D3 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:KSBHgZUSEsbC5RXcbPadeHPCuCo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:Q06506 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-35124|uniprotkb:D6W4D3|ensemblfungi:YPR137W psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:rrp9_yeast(display_long)|uniprotkb:RRP9(gene name)|psi-mi:RRP9(display_short)|uniprotkb:YPR137W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690632|imex:IM-25795-529 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_015463.1|sgd:S000006341|mint:Q06506|dip:DIP-6537N|ensemblfungi:YPR137W(gene)|ensemblfungi:YPR137W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR039241|rcsb pdb:4J0X|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPR137W(identity) - crc64:AAFA78B5F6215D89 crc64:96BEAB7DC338E70E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:jcGY4AY3fUm5mEoDKsFxA6nvpQg559292 rigid:NTeWvL0eMSAz0+bfyh4b0MGDPR4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P36009 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690620|imex:IM-25795-623 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - crc64:9278BF873834FC7E crc64:AAFA78B5F6215D89 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:zyinO05tIjRaDvaBib9IKj07V0A false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P53317 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690608|imex:IM-25795-527 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) - crc64:9278BF873834FC7E - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rigid:gxm/qAxlZejWNfRo5R2w+WlLVps false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06132 uniprotkb:Q02354 intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690596|imex:IM-25795-823 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - crc64:8EEFDB8258407FF3 crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:QN5m/5CgpQQ1wgY1Gt7ivpBEB44 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:Q04500 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-27917|uniprotkb:D6W0J2|ensemblfungi:YML093W psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:utp14_yeast(display_long)|uniprotkb:YML093W(locus name)|uniprotkb:U three protein 14(gene name synonym)|uniprotkb:UTP14(gene name)|psi-mi:UTP14(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690584|imex:IM-25795-85 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) refseq:NP_013617.1|sgd:S000004558|dip:DIP-6410N|mint:Q04500|ensemblfungi:YML093W(gene)|ensemblfungi:YML093W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR006709(Small-subunit processome, Utp14)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YML093W(identity) - crc64:EE15D51A7F6BE1A2 crc64:0D4FC90D1CB3CFF1 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:qK1PLcsc58zlpaWpK/18rTqXH/Q559292 rigid:u1v0UwShuPcKAyXDzcgt9pjHag4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04500 uniprotkb:Q04217 intact:EBI-27917|uniprotkb:D6W0J2|ensemblfungi:YML093W intact:EBI-1820|ensemblfungi:YMR128W|uniprotkb:D6VZV1 psi-mi:utp14_yeast(display_long)|uniprotkb:YML093W(locus name)|uniprotkb:U three protein 14(gene name synonym)|uniprotkb:UTP14(gene name)|psi-mi:UTP14(display_short) psi-mi:dhr1_yeast(display_long)|uniprotkb:ECM16(gene name)|psi-mi:ECM16(display_short)|uniprotkb:DHR1(gene name synonym)|uniprotkb:YMR128W(locus name)|uniprotkb:YM9553.04(orf name)|uniprotkb:DEAH box RNA helicase DHR1(gene name synonym)|uniprotkb:Extracellular mutant protein 16(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690572|imex:IM-25795-621 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013617.1|sgd:S000004558|dip:DIP-6410N|mint:Q04500|ensemblfungi:YML093W(gene)|ensemblfungi:YML093W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR006709(Small-subunit processome, Utp14)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YML093W(identity) ensemblfungi:YMR128W(gene)|ensemblfungi:YMR128W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|rcsb pdb:6H57|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_013847.1|sgd:S000004735|dip:DIP-6722N|mint:Q04217|ensembl:YMR128W(identity) - crc64:0D4FC90D1CB3CFF1 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:qK1PLcsc58zlpaWpK/18rTqXH/Q559292 rogid:UN6v3h4OiKlKuYfkyy/fHqmkri8559292 rigid:QSyBelWqEevV4RQ7pXgVsDlz8yQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06344 uniprotkb:Q06132 intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690536|imex:IM-25795-203 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:A16FB043D0ED86B7 crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:KYL7ad8NbobHD6cGbXV3Jczos+w false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:Q06132 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691339|imex:IM-25795-387 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:60FD2E0E1B3B79B3 crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:QN5m/5CgpQQ1wgY1Gt7ivpBEB44 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40079 uniprotkb:Q06132 intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691327|imex:IM-25795-223 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:77B7F3F126036489 crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:xn6ndWfmzQMhm5Hpc9++j94g86I false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:Q06132 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691315|imex:IM-25795-841 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:7A7F964E2C7FD056 crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:GIo6nl7ZUSvpu4olNx4cEWVyUCM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12099 uniprotkb:Q06132 intact:EBI-6776|uniprotkb:D6VS07|ensemblfungi:YDR021W intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:fal1_yeast(display_long)|uniprotkb:FAL1(gene name)|psi-mi:FAL1(display_short)|uniprotkb:YDR021W(locus name)|uniprotkb:YD9335.07(orf name)|uniprotkb:PZC399(orf name)|uniprotkb:Translation initiation factor four A-like protein 1(gene name synonym) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691303|imex:IM-25795-425 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010304.3|sgd:S000002428|dip:DIP-4516N|mint:Q12099|ensemblfungi:YDR021W(gene)|ensemblfungi:YDR021W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097078"(FAL1-SGD1 complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-429947|reactome:R-SCE-975957|ensembl:YDR021W(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:76A3441728D21253 crc64:8EEFDB8258407FF3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpSu5iJlZBXbp7bqquc7csKCN+Y559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:9lpXxcKQRLZ1wpnG+8C0GJCn9mU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12481 uniprotkb:Q06506 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-35124|uniprotkb:D6W4D3|ensemblfungi:YPR137W psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:rrp9_yeast(display_long)|uniprotkb:RRP9(gene name)|psi-mi:RRP9(display_short)|uniprotkb:YPR137W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691291|imex:IM-25795-839 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_015463.1|sgd:S000006341|mint:Q06506|dip:DIP-6537N|ensemblfungi:YPR137W(gene)|ensemblfungi:YPR137W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR039241|rcsb pdb:4J0X|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPR137W(identity) - - crc64:96BEAB7DC338E70E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:jcGY4AY3fUm5mEoDKsFxA6nvpQg559292 rigid:iyLJL9w1VF+q2EERtloGM1rXxfw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25368 uniprotkb:P25368 intact:EBI-16019|uniprotkb:D6VQY4|ensemblfungi:YCL031C intact:EBI-16019|uniprotkb:D6VQY4|ensemblfungi:YCL031C psi-mi:rrp7_yeast(display_long)|uniprotkb:RRP7(gene name)|psi-mi:RRP7(display_short)|uniprotkb:YCL184(orf name)|uniprotkb:YCL31C(orf name)|uniprotkb:YCL031C(locus name) psi-mi:rrp7_yeast(display_long)|uniprotkb:RRP7(gene name)|psi-mi:RRP7(display_short)|uniprotkb:YCL184(orf name)|uniprotkb:YCL31C(orf name)|uniprotkb:YCL031C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691279|imex:IM-25795-637 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009899.1|sgd:S000000536|interpro:IPR040446|interpro:IPR040447|rcsb pdb:2MBY|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YCL031C(gene)|ensemblfungi:YCL031C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR024326|dip:DIP-4974N|mint:P25368|ensembl:YCL031C(identity) refseq:NP_009899.1|sgd:S000000536|interpro:IPR040446|interpro:IPR040447|rcsb pdb:2MBY|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YCL031C(gene)|ensemblfungi:YCL031C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR024326|dip:DIP-4974N|mint:P25368|ensembl:YCL031C(identity) - crc64:768F43B0057788F2 crc64:768F43B0057788F2 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:fovz4jwoSdxp4Yh7KCDYpv3f0mc559292 rogid:fovz4jwoSdxp4Yh7KCDYpv3f0mc559292 rigid:5rDCGWn23hJ7gHtkuSyrIE3CztE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12481 uniprotkb:Q12481 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691267|imex:IM-25795-101 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rigid:m505Jc4K6jtnQzlL3lbcyZ9SyOo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P20448 uniprotkb:Q12481 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691255|imex:IM-25795-837 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rigid:Rn1E3CL6LotV9xcz6j6eclVbrhc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P45818 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-15686|uniprotkb:D6VTY1|ensemblfungi:YGL171W psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:rok1_yeast(display_long)|uniprotkb:ROK1(gene name)|psi-mi:ROK1(display_short)|uniprotkb:YGL171W(locus name)|uniprotkb:G1651(orf name)|uniprotkb:Rescuer of KEM1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691243|imex:IM-25795-423 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_011344.1|sgd:S000003139|ensemblfungi:YGL171W(gene)|ensemblfungi:YGL171W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0048254"(snoRNA localization)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR044764|reactome:R-SCE-6791226|dip:DIP-5111N|mint:P45818|ensembl:YGL171W(identity) - crc64:9A2B5C885493D7D3 crc64:CACB950B8A15D5A2 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:Id8imuuTKPSw1r4qwGClHrYAxpQ559292 rigid:JLz1Bg166X8wdybovJHtiYsKR1I false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:P53866 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691231|imex:IM-25795-635 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:UqwfXZso2WfPAG8CL3E5ZBuZ5iU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12481 uniprotkb:P53866 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691219|imex:IM-25795-421 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:J9Z9GyHxHclJZtvp7G8nlDTvhxM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53131 uniprotkb:P53866 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691207|imex:IM-25795-835 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|ensembl:YGL120C(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:DA8A085EC50FF430 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:YccIs1EqaSuCfIjPqHJQv8aJqP0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:P53866 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691195|imex:IM-25795-833 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:7A7F964E2C7FD056 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:UO8W3l3sKo1zwmaJ0XAPBw5D+AU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:P53866 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691183|imex:IM-25795-747 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:EE15D51A7F6BE1A2 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:UMsPcz6UJcL3FR7PKhHF8I1waNw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P53866 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691171|imex:IM-25795-99 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:AAFA78B5F6215D89 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:WGygC+fXPXRz6vUuFQsWN0+S7LU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P20448 uniprotkb:P53866 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691159|imex:IM-25795-831 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:XqQTePQgMjZqI1l1W4os1D2CnCc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P47083 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691147|imex:IM-25795-537 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:AAFA78B5F6215D89 crc64:DEAF52FC003A0FFD figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:yTEEK0o80wUc52ZA43u97WnMTS0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P25586 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691135|imex:IM-25795-419 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) - crc64:9278BF873834FC7E crc64:7A7F964E2C7FD056 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rigid:SLzxx4q3TJTqhNUHQiyt1yVW+LI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P25586 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691123|imex:IM-25795-221 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) - crc64:AAFA78B5F6215D89 crc64:7A7F964E2C7FD056 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rigid:5tV+7RPm/VmWcB6P8jCGLZGqQh8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53914 uniprotkb:P53914 intact:EBI-28914|uniprotkb:D6W150|ensemblfungi:YNL132W intact:EBI-28914|uniprotkb:D6W150|ensemblfungi:YNL132W psi-mi:nat10_yeast(display_long)|uniprotkb:KRE33(gene name)|psi-mi:KRE33(display_short)|uniprotkb:18S rRNA cytosine acetyltransferase(gene name synonym)|uniprotkb:Killer toxin-resistance protein 33(gene name synonym)|uniprotkb:NAT10(gene name synonym)|uniprotkb:RRA1(gene name synonym)|uniprotkb:Ribosomal RNA cytidine acetyltransferase 1(gene name synonym)|uniprotkb:N1216(orf name)|uniprotkb:N1858(orf name)|uniprotkb:YNL132W(locus name) psi-mi:nat10_yeast(display_long)|uniprotkb:KRE33(gene name)|psi-mi:KRE33(display_short)|uniprotkb:18S rRNA cytosine acetyltransferase(gene name synonym)|uniprotkb:Killer toxin-resistance protein 33(gene name synonym)|uniprotkb:NAT10(gene name synonym)|uniprotkb:RRA1(gene name synonym)|uniprotkb:Ribosomal RNA cytidine acetyltransferase 1(gene name synonym)|uniprotkb:N1216(orf name)|uniprotkb:N1858(orf name)|uniprotkb:YNL132W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691111|imex:IM-25795-633 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014267.1|sgd:S000005076|dip:DIP-6588N|mint:P53914|ensemblfungi:YNL132W(gene)|ensemblfungi:YNL132W_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0016556"(mRNA modification)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0051391"(tRNA acetylation)|go:"GO:1904812"(rRNA acetylation involved in maturation of SSU-rRNA)|go:"GO:1990883"(rRNA cytidine N-acetyltransferase activity)|interpro:IPR000182(GCN5-related N-acetyltransferase)|interpro:IPR007807(Protein of unknown function DUF699, ATPase putative)|interpro:IPR013562(Region of unknown function DUF1726)|interpro:IPR027992|interpro:IPR032672|interpro:IPR033688|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|ensembl:YNL132W(identity) refseq:NP_014267.1|sgd:S000005076|dip:DIP-6588N|mint:P53914|ensemblfungi:YNL132W(gene)|ensemblfungi:YNL132W_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0016556"(mRNA modification)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0051391"(tRNA acetylation)|go:"GO:1904812"(rRNA acetylation involved in maturation of SSU-rRNA)|go:"GO:1990883"(rRNA cytidine N-acetyltransferase activity)|interpro:IPR000182(GCN5-related N-acetyltransferase)|interpro:IPR007807(Protein of unknown function DUF699, ATPase putative)|interpro:IPR013562(Region of unknown function DUF1726)|interpro:IPR027992|interpro:IPR032672|interpro:IPR033688|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|ensembl:YNL132W(identity) - crc64:76721ED0867ED618 crc64:76721ED0867ED618 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:mtIY2LZRAJTtaBBydvREm22cVCA559292 rogid:mtIY2LZRAJTtaBBydvREm22cVCA559292 rigid:RifCBlfvDf4DkA1nr94VybMOJE8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:Q03532 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691099|imex:IM-25795-745 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - crc64:9278BF873834FC7E crc64:EE15D51A7F6BE1A2 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:YuY9baobfSipmc+FYp2aI9K/8vM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53866 uniprotkb:Q03532 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691087|imex:IM-25795-743 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - - crc64:EE15D51A7F6BE1A2 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:UMsPcz6UJcL3FR7PKhHF8I1waNw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47083 uniprotkb:Q03532 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691075|imex:IM-25795-741 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - crc64:DEAF52FC003A0FFD crc64:EE15D51A7F6BE1A2 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:eOxUAfq105Yl6HqJbnnAQelYObM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:Q03532 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691063|imex:IM-25795-631 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - crc64:5F38B88CDEEFC01F crc64:EE15D51A7F6BE1A2 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:1cr0BviPJbFqai3fTI3ap1ghXJQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06132 uniprotkb:Q12099 intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C intact:EBI-6776|uniprotkb:D6VS07|ensemblfungi:YDR021W psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:fal1_yeast(display_long)|uniprotkb:FAL1(gene name)|psi-mi:FAL1(display_short)|uniprotkb:YDR021W(locus name)|uniprotkb:YD9335.07(orf name)|uniprotkb:PZC399(orf name)|uniprotkb:Translation initiation factor four A-like protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691051|imex:IM-25795-219 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) refseq:NP_010304.3|sgd:S000002428|dip:DIP-4516N|mint:Q12099|ensemblfungi:YDR021W(gene)|ensemblfungi:YDR021W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097078"(FAL1-SGD1 complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-429947|reactome:R-SCE-975957|ensembl:YDR021W(identity) - crc64:8EEFDB8258407FF3 crc64:76A3441728D21253 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rogid:DpSu5iJlZBXbp7bqquc7csKCN+Y559292 rigid:9lpXxcKQRLZ1wpnG+8C0GJCn9mU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:P53743 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691039|imex:IM-25795-97 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) - crc64:5F38B88CDEEFC01F crc64:5F38B88CDEEFC01F figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rigid:m+56F7DbXlOMlY3OZgF7QvfYRVM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:Q06344 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691027|imex:IM-25795-217 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) - crc64:60FD2E0E1B3B79B3 crc64:A16FB043D0ED86B7 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rigid:w/B6jYpWhqo6v2r/B647j3ah11Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q99207 uniprotkb:P38333 intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691015|imex:IM-25795-95 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - crc64:F7615D96B02E15DE crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:A1pPqrtPL8A1urqYgg3Kghr1rJY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53335 uniprotkb:P38333 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691003|imex:IM-25795-417 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - crc64:D5AB6EB2C129922D crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:GI/b5ZKTHhE4CvqEn3l6qOMa3PA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:P38333 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690991|imex:IM-25795-629 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - crc64:5F38B88CDEEFC01F crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:MptTx98hejg/3PRTlwfn7fShWEg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40079 uniprotkb:P36009 intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690979|imex:IM-25795-739 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - crc64:77B7F3F126036489 crc64:AAFA78B5F6215D89 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:Yt2mumq6pLscxgZJmdveOwRWPtk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53335 uniprotkb:P36009 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690967|imex:IM-25795-355 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - crc64:D5AB6EB2C129922D crc64:AAFA78B5F6215D89 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:cF3kd7GOF4xN1BmXIsxBcHJ8IlQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P36009 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690955|imex:IM-25795-215 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - crc64:AAFA78B5F6215D89 crc64:AAFA78B5F6215D89 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:x4H1EuNfObU0GkxbMXJnvrxyS5g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53317 uniprotkb:P36009 intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690943|imex:IM-25795-415 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - - crc64:AAFA78B5F6215D89 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:tTn5GeB2WSVukx5zyJVWScA3TZ0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P53317 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690931|imex:IM-25795-213 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) - crc64:AAFA78B5F6215D89 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rigid:tTn5GeB2WSVukx5zyJVWScA3TZ0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:P38719 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-5633|uniprotkb:D3DLB8|ensemblfungi:YHR169W psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:dbp8_yeast(display_long)|uniprotkb:YHR169W(locus name)|uniprotkb:DBP8(gene name)|psi-mi:DBP8(display_short)|uniprotkb:DEAD box protein 8(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690919|imex:IM-25795-93 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_012039.1|sgd:S000001212|dip:DIP-5628N|mint:P38719|ensemblfungi:YHR169W(gene)|ensemblfungi:YHR169W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YHR169W(identity) - crc64:5F38B88CDEEFC01F crc64:B0451EB85247372C figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:mnaGKGPAjFq7/Xfe7pSa0B4LEVE559292 rigid:kesK2nZbjhbrtFjS9hPhE/L2yvk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12481 uniprotkb:P20448 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690907|imex:IM-25795-737 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) - - - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rigid:Rn1E3CL6LotV9xcz6j6eclVbrhc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:P20448 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690895|imex:IM-25795-627 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) - crc64:5F38B88CDEEFC01F - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rigid:4mGVwEkj/JN2eXmAXqeMLlJBf88 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P15790 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690883|imex:IM-25795-211 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:9A2B5C885493D7D3 crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:cwU26rYQo0KX+I+YdF8L9/+ngjM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53335 uniprotkb:P15790 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690871|imex:IM-25795-209 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:D5AB6EB2C129922D crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:6HD5UyE20QT0YMUJBlbI3mJ+wwg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12460 uniprotkb:P39990 intact:EBI-17148|ensemblfungi:YLR197W|uniprotkb:D6VYK0 intact:EBI-12032|ensemblfungi:YEL026W|uniprotkb:D3DLM2 psi-mi:nop56_yeast(display_long)|uniprotkb:SIK1(gene name synonym)|uniprotkb:Ribosome biosynthesis protein SIK1(gene name synonym)|uniprotkb:YLR197W(locus name)|uniprotkb:L8167.9(orf name)|uniprotkb:NOP56(gene name)|psi-mi:NOP56(display_short)|uniprotkb:Suppressor of I kappa b protein 1(gene name synonym) psi-mi:snu13_yeast(display_long)|uniprotkb:YEL026W(locus name)|uniprotkb:SNU13(gene name)|psi-mi:SNU13(display_short)|uniprotkb:Small nuclear ribonucleoprotein-associated protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690859|imex:IM-25795-829 author score:0.95 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YLR197W(gene)|ensemblfungi:YLR197W_mRNA(transcript)|go:"GO:0000154"(rRNA modification)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|refseq:NP_013298.1|sgd:S000004187|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-4405N|mint:Q12460|ensembl:YLR197W(identity) ensemblfungi:YEL026W(gene)|ensemblfungi:YEL026W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030621"(U4 snRNA binding)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:1905216"(positive regulation of RNA binding)|interpro:IPR002415(High mobility group-like nuclear protein)|interpro:IPR004037(Ribosomal protein L7Ae)|interpro:IPR004038(Ribosomal protein L7Ae/L30e/S12e/Gadd45)|interpro:IPR018492|interpro:IPR029064|rcsb pdb:1ZWZ|rcsb pdb:2ALE|rcsb pdb:3JCM|go:"GO:0005654"(nucleoplasm)|rcsb pdb:5GAN|rcsb pdb:5GAP|rcsb pdb:5NRL|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|rcsb pdb:4NUT|reactome:R-SCE-6791226|refseq:NP_010888.1|sgd:S000000752|mint:P39990|dip:DIP-2870N|ensembl:YEL026W(identity) - crc64:F8522A5870EF4842 crc64:4489780153E8F182 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:l3UAmoOUECH1uov6nv7MSwSv/3s559292 rogid:4C07wkvZ4Nts4Oxw4/L7QMkwcmE559292 rigid:WOZiATKvLW5Q+TbqdKAawtTtAQU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P15646 uniprotkb:Q12460 intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W intact:EBI-17148|ensemblfungi:YLR197W|uniprotkb:D6VYK0 psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:nop56_yeast(display_long)|uniprotkb:SIK1(gene name synonym)|uniprotkb:Ribosome biosynthesis protein SIK1(gene name synonym)|uniprotkb:YLR197W(locus name)|uniprotkb:L8167.9(orf name)|uniprotkb:NOP56(gene name)|psi-mi:NOP56(display_short)|uniprotkb:Suppressor of I kappa b protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690847|imex:IM-25795-535 author score:0.95 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL014W(identity) ensemblfungi:YLR197W(gene)|ensemblfungi:YLR197W_mRNA(transcript)|go:"GO:0000154"(rRNA modification)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|refseq:NP_013298.1|sgd:S000004187|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-4405N|mint:Q12460|ensembl:YLR197W(identity) - crc64:56A8B958A7B6066E crc64:F8522A5870EF4842 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 rogid:l3UAmoOUECH1uov6nv7MSwSv/3s559292 rigid:wEX2I2CxZ4Odz4nFzxlfWM39LTY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:Q12481 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690835|imex:IM-25795-735 author score:0.94 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) - crc64:7A7F964E2C7FD056 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rigid:3ezMH+TVsApxRbezgmOXA4l01cM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:P39985 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-6120|uniprotkb:Q9Y737|uniprotkb:D3DLJ5|ensemblfungi:YEL055C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:dpo5_yeast(display_long)|uniprotkb:POL5(gene name)|psi-mi:POL5(display_short)|uniprotkb:DNA polymerase V(gene name synonym)|uniprotkb:DNA polymerase phi(gene name synonym)|uniprotkb:YEL055C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690823|imex:IM-25795-827 author score:0.94 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_010859.1|sgd:S000000781|dip:DIP-6314N|mint:P39985|ensemblfungi:YEL055C(gene)|ensemblfungi:YEL055C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000166"(nucleotide binding)|go:"GO:0000182"(rDNA binding)|go:"GO:0003887"(DNA-directed DNA polymerase activity)|go:"GO:0005730"(nucleolus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006364"(rRNA processing)|go:"GO:0009303"(rRNA transcription)|go:"GO:0030685"(nucleolar preribosome)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0090070"(positive regulation of ribosome biogenesis)|interpro:IPR007015(DNA polymerase V)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR017964|ensembl:YEL055C(identity) - crc64:7A7F964E2C7FD056 crc64:A9F32B1D15039D18 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:NHTvvRpEhRKlHDZL1VO4Df3owgA559292 rigid:4Xyelpxye6DttRmcyUK7s58dbHk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53866 uniprotkb:P38333 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690811|imex:IM-25795-353 author score:0.94 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - - crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:XU5Je+vdsH5dcR37imO4h6GqFwQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q99207 uniprotkb:Q12136 intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690799|imex:IM-25795-91 author score:0.94 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:F7615D96B02E15DE crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:76gShUBKEyMd3EgGdf/N535mLrU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:P53254 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690787|imex:IM-25795-825 author score:0.94 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - - crc64:9A2B5C885493D7D3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:rX8IT4Lnzf1iGBGBaLBf5DRsBxc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:P53254 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690775|imex:IM-25795-533 author score:0.94 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - crc64:7A7F964E2C7FD056 crc64:9A2B5C885493D7D3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:maLVhcyLUfDspmvdtbh5eh2H6Fc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:Q12220 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-5896|uniprotkb:Q05386|uniprotkb:D6VYC4|ensemblfungi:YLR129W psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:utp12_yeast(display_long)|uniprotkb:DIP2(gene name)|psi-mi:DIP2(display_short)|uniprotkb:YLR129W(locus name)|uniprotkb:L9233.1(orf name)|uniprotkb:L3116(orf name)|uniprotkb:UTP12(gene name synonym)|uniprotkb:U three protein 12(gene name synonym)|uniprotkb:DOM34-interacting protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690763|imex:IM-25795-89 author score:0.94 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_013230.1|sgd:S000004119|dip:DIP-6494N|mint:Q12220|ensemblfungi:YLR129W(gene)|ensemblfungi:YLR129W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR129W(identity) - crc64:5F38B88CDEEFC01F crc64:7D9AEC7AF6A9C740 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:8Cz4O8hzaHCSq72kVSptQqDE94M559292 rigid:JFg9lXyOV8ZgueilZ0Abs/SZVz8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:Q12481 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16690751|imex:IM-25795-207 author score:0.94 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) - crc64:9278BF873834FC7E - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rigid:OjaMCjAN1XQXBDSL5D+2Ps/y2Gw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25586 uniprotkb:Q04500 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-27917|uniprotkb:D6W0J2|ensemblfungi:YML093W psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:utp14_yeast(display_long)|uniprotkb:YML093W(locus name)|uniprotkb:U three protein 14(gene name synonym)|uniprotkb:UTP14(gene name)|psi-mi:UTP14(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691386|imex:IM-25795-17 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_013617.1|sgd:S000004558|dip:DIP-6410N|mint:Q04500|ensemblfungi:YML093W(gene)|ensemblfungi:YML093W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR006709(Small-subunit processome, Utp14)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YML093W(identity) - crc64:7A7F964E2C7FD056 crc64:0D4FC90D1CB3CFF1 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:qK1PLcsc58zlpaWpK/18rTqXH/Q559292 rigid:6ah0GbDnqw7cAa7lRvuPaPr23nE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:P36009 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691362|imex:IM-25795-267 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - - crc64:AAFA78B5F6215D89 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:KbVYHmslNi3SEF9/i5Y9FON7W7k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53276 uniprotkb:Q02931 intact:EBI-23301|uniprotkb:D6VUR0|ensemblfungi:YGR128C intact:EBI-37773|uniprotkb:D6W3P1|ensemblfungi:YPL126W psi-mi:utp8_yeast(display_long)|uniprotkb:UTP8(gene name)|psi-mi:UTP8(display_short)|uniprotkb:t-UTP8(gene name synonym)|uniprotkb:U three protein 8(gene name synonym)|uniprotkb:U3 protein 8 required for transcription(gene name synonym)|uniprotkb:YGR128C(locus name) psi-mi:utp17_yeast(display_long)|uniprotkb:NAN1(gene name)|psi-mi:NAN1(display_short)|uniprotkb:UTP17(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 17(gene name synonym)|uniprotkb:U three protein 17(gene name synonym)|uniprotkb:U3 protein 17 required for transcription(gene name synonym)|uniprotkb:YPL126W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691410|imex:IM-25795-579 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003360|refseq:NP_011644.3|dip:DIP-6747N|mint:P53276|ensemblfungi:YGR128C(gene)|ensemblfungi:YGR128C_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR018843|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YGR128C(identity) refseq:NP_015199.1|sgd:S000006047|dip:DIP-3999N|mint:Q02931|ensemblfungi:YPL126W(gene)|ensemblfungi:YPL126W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPL126W(identity) - crc64:6F5AE1492F841F49 crc64:F4E3687BD328230E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:dG2UtBMuPQujwdovAL/FDjpqps0559292 rogid:IwajTHwER9UA233SxhHd4/5Tmu0559292 rigid:8KlTNa6vuN8wc46WWuhQed6+8pM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P15790 uniprotkb:P40362 intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691422|imex:IM-25795-23 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:6A1A7F1BF47250C9 crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:/3UyBAFJccTi1xIiu5XL0ZdxT4k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P20448 uniprotkb:P40362 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691434|imex:IM-25795-767 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - - crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:12EpKalRAO1dc4X38ReZx7JlGmw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06344 uniprotkb:P40362 intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691446|imex:IM-25795-271 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:A16FB043D0ED86B7 crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:06+GAGnsp0hJzBVGrLjzaQfyPqM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12481 uniprotkb:P40362 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691458|imex:IM-25795-769 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - - crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:IEIed43FNUBV7h6Jjtc9LO2iOq4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P40362 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691470|imex:IM-25795-273 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:9A2B5C885493D7D3 crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:gtGiyPIpk0nC4Ve82SsGJXdAA+8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38333 uniprotkb:Q99207 intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691482|imex:IM-25795-591 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - crc64:399A415131294637 crc64:F7615D96B02E15DE figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:A1pPqrtPL8A1urqYgg3Kghr1rJY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:Q99207 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691494|imex:IM-25795-771 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - crc64:9278BF873834FC7E crc64:F7615D96B02E15DE figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:76gShUBKEyMd3EgGdf/N535mLrU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:P53254 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691506|imex:IM-25795-25 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - crc64:AAFA78B5F6215D89 crc64:9A2B5C885493D7D3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:XYLQfzWf/yxjRTe+2DYW73QZgXE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P53254 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691518|imex:IM-25795-175 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - crc64:9A2B5C885493D7D3 crc64:9A2B5C885493D7D3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:xmXbvXy0W69Rzsecj0Zufv173S0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:P53254 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691530|imex:IM-25795-275 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - crc64:60FD2E0E1B3B79B3 crc64:9A2B5C885493D7D3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:Zki/NdIemMAUnaDKJe7bxhdX/Ow false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:P53251 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-23221|ensemblfungi:YGR081C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691374|imex:IM-25795-269 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) - crc64:9A2B5C885493D7D3 - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rigid:rX8IT4Lnzf1iGBGBaLBf5DRsBxc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:Q04500 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-27917|uniprotkb:D6W0J2|ensemblfungi:YML093W psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:utp14_yeast(display_long)|uniprotkb:YML093W(locus name)|uniprotkb:U three protein 14(gene name synonym)|uniprotkb:UTP14(gene name)|psi-mi:UTP14(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691398|imex:IM-25795-19 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_013617.1|sgd:S000004558|dip:DIP-6410N|mint:Q04500|ensemblfungi:YML093W(gene)|ensemblfungi:YML093W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR006709(Small-subunit processome, Utp14)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YML093W(identity) - crc64:9A2B5C885493D7D3 crc64:0D4FC90D1CB3CFF1 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:qK1PLcsc58zlpaWpK/18rTqXH/Q559292 rigid:psWwB8Kb6T4/ZPmgrjPmS5MhJB4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43639 uniprotkb:P19454 intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 intact:EBI-9548|ensemblfungi:YOR061W|uniprotkb:D6W2C4 psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:csk22_yeast(display_long)|uniprotkb:CKA2(gene name)|psi-mi:CKA2(display_short)|uniprotkb:YOR29-12(orf name)|uniprotkb:YOR061W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691842|imex:IM-25795-795 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) ensemblfungi:YOR061W(gene)|ensemblfungi:YOR061W_mRNA(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0071470"(cellular response to osmotic stress)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|refseq:NP_014704.1|sgd:S000005587|mint:P19454|dip:DIP-1038N|ensembl:YOR061W(identity) - crc64:9ACA8D285E6990AF crc64:30E214BD852824D0 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rogid:E39eioYivVEqVSUhL99a2iGvisg559292 rigid:LTXHUvkEIYJNbSvfGCKF2WAFdEU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P15790 uniprotkb:P19454 intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 intact:EBI-9548|ensemblfungi:YOR061W|uniprotkb:D6W2C4 psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:csk22_yeast(display_long)|uniprotkb:CKA2(gene name)|psi-mi:CKA2(display_short)|uniprotkb:YOR29-12(orf name)|uniprotkb:YOR061W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691830|imex:IM-25795-693 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) ensemblfungi:YOR061W(gene)|ensemblfungi:YOR061W_mRNA(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0071470"(cellular response to osmotic stress)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|refseq:NP_014704.1|sgd:S000005587|mint:P19454|dip:DIP-1038N|ensembl:YOR061W(identity) - crc64:6A1A7F1BF47250C9 crc64:30E214BD852824D0 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rogid:E39eioYivVEqVSUhL99a2iGvisg559292 rigid:jPoRe78mKX/Bj8cSLTwV5bDyhN8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43639 uniprotkb:P15790 intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691818|imex:IM-25795-31 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:9ACA8D285E6990AF crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:CBVMW3krEAcKWK84ijWYT8wM2UY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40362 uniprotkb:Q02354 intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691806|imex:IM-25795-29 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - crc64:0FEBD4540CF039DA crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:9nu5aYu+qXDTtyuTsuNO6W7I8Ro false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47083 uniprotkb:Q02354 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691794|imex:IM-25795-289 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - crc64:DEAF52FC003A0FFD crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:cHwddnKRAhjNNmuCEz0CDz/F6NY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32899 uniprotkb:P47083 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691782|imex:IM-25795-595 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:2CA16A3425691DBD crc64:DEAF52FC003A0FFD figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:LKcPuhniWXqwiyZvfw9A9I7lwS4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:P38333 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691770|imex:IM-25795-27 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - - crc64:399A415131294637 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:75f5z9BtOgRuRXGekmBo1XXmtRI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P19454 uniprotkb:P15790 intact:EBI-9548|ensemblfungi:YOR061W|uniprotkb:D6W2C4 intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:csk22_yeast(display_long)|uniprotkb:CKA2(gene name)|psi-mi:CKA2(display_short)|uniprotkb:YOR29-12(orf name)|uniprotkb:YOR061W(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691758|imex:IM-25795-287 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YOR061W(gene)|ensemblfungi:YOR061W_mRNA(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0071470"(cellular response to osmotic stress)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|refseq:NP_014704.1|sgd:S000005587|mint:P19454|dip:DIP-1038N|ensembl:YOR061W(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:30E214BD852824D0 crc64:6A1A7F1BF47250C9 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:E39eioYivVEqVSUhL99a2iGvisg559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:jPoRe78mKX/Bj8cSLTwV5bDyhN8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06287 uniprotkb:Q99207 intact:EBI-11979|ensemblfungi:YLR186W|uniprotkb:E9P8U2|uniprotkb:D6VYI9 intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:nep1_yeast(display_long)|uniprotkb:EMG1(gene name)|psi-mi:EMG1(display_short)|uniprotkb:NEP1(gene name synonym)|uniprotkb:YLR186W(locus name)|uniprotkb:L9470.5(orf name)|uniprotkb:Nucleolar essential protein 1(gene name synonym)|uniprotkb:"18S rRNA (pseudouridine(1189)-N1)-methyltransferase"(gene name synonym)|uniprotkb:Essential for mitotic growth protein 1(gene name synonym) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691746|imex:IM-25795-773 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005880"(nuclear microtubule)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070037"("rRNA (pseudouridine) methyltransferase activity")|go:"GO:0070475"(rRNA base methylation)|interpro:IPR005304(Suppressor Mra1)|ensemblfungi:YLR186W(gene)|interpro:IPR029026|interpro:IPR029028|rcsb pdb:2V3J|rcsb pdb:2V3K|ensemblfungi:YLR186W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|rcsb pdb:3OIJ|rcsb pdb:3OIN|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:3OII|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|sgd:S000004176|refseq:NP_013287.1|reactome:R-SCE-6791226|dip:DIP-6504N|ensembl:YLR186W(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - crc64:4A8FCDA812051AD1 crc64:F7615D96B02E15DE figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:z62Fg9aJ4kKGgU5NIlAND2yHGrQ559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:0TIlGWx8SAzqy1fgBH/Ekl9kC6o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:P40362 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691734|imex:IM-25795-395 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:60FD2E0E1B3B79B3 crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:9nu5aYu+qXDTtyuTsuNO6W7I8Ro false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06078 uniprotkb:P40362 intact:EBI-359|uniprotkb:D6VZ43|ensemblfungi:YLR409C intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:utp21_yeast(display_long)|uniprotkb:YLR409C(locus name)|uniprotkb:L8084.22(orf name)|uniprotkb:UTP21(gene name)|psi-mi:UTP21(display_short)|uniprotkb:U three protein 21(gene name synonym) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691722|imex:IM-25795-285 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004401|refseq:NP_013513.3|dip:DIP-6416N|mint:Q06078|ensemblfungi:YLR409C(gene)|ensemblfungi:YLR409C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR007319(Small-subunit processome, Utp21)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|rcsb pdb:4HNX|rcsb pdb:4NSX|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR409C(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:F1F856EF28369351 crc64:0FEBD4540CF039DA figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:p8cVdV7LI9hwgOSJSz2SUk+Z6Aw559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:GozcDR7XHsVET/8TP/qmJ+lAElI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:P47083 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691710|imex:IM-25795-393 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:60FD2E0E1B3B79B3 crc64:DEAF52FC003A0FFD figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:cHwddnKRAhjNNmuCEz0CDz/F6NY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47083 uniprotkb:P32899 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691698|imex:IM-25795-477 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) - crc64:DEAF52FC003A0FFD crc64:2CA16A3425691DBD figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rigid:LKcPuhniWXqwiyZvfw9A9I7lwS4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53131 uniprotkb:P53335 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691686|imex:IM-25795-279 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|ensembl:YGL120C(identity) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) - crc64:DA8A085EC50FF430 crc64:D5AB6EB2C129922D figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rigid:NOZQ3DA+l7F4sZCDZdc572zdxlM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:Q02354 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691674|imex:IM-25795-177 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - crc64:9A2B5C885493D7D3 crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:Zki/NdIemMAUnaDKJe7bxhdX/Ow false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12481 uniprotkb:Q02354 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691662|imex:IM-25795-679 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - - crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:pDfraH+AYQMDVWxaj4JuKrFrs68 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40079 uniprotkb:Q02354 intact:EBI-10103|uniprotkb:D3DM33|ensemblfungi:YER127W intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:lcp5_yeast(display_long)|uniprotkb:SYGP-ORF43(orf name)|uniprotkb:YER127W(locus name)|uniprotkb:LCP5(gene name)|psi-mi:LCP5(display_short) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691650|imex:IM-25795-475 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011053.1|sgd:S000000929|ensemblfungi:YER127W(gene)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030532"(small nuclear ribonucleoprotein complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007146(Small-subunit processome, Utp3)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|ensemblfungi:YER127W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|dip:DIP-1410N|mint:P40079|ensembl:YER127W(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - crc64:77B7F3F126036489 crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:/f438j7ggVMtp63GW5hzGN7vlWc559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:v+f6s+MW4dcHWPrQ1RfxVAu54F8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:Q02354 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691638|imex:IM-25795-677 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - crc64:5F38B88CDEEFC01F crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:4tVUETsEkz8DOYjWL0QNmlrTboU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06344 uniprotkb:Q02354 intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691626|imex:IM-25795-391 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - crc64:A16FB043D0ED86B7 crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:w/B6jYpWhqo6v2r/B647j3ah11Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P15790 uniprotkb:P43639 intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691854|imex:IM-25795-797 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:6A1A7F1BF47250C9 crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:CBVMW3krEAcKWK84ijWYT8wM2UY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P19454 uniprotkb:P43639 intact:EBI-9548|ensemblfungi:YOR061W|uniprotkb:D6W2C4 intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 psi-mi:csk22_yeast(display_long)|uniprotkb:CKA2(gene name)|psi-mi:CKA2(display_short)|uniprotkb:YOR29-12(orf name)|uniprotkb:YOR061W(locus name) psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691866|imex:IM-25795-695 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YOR061W(gene)|ensemblfungi:YOR061W_mRNA(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0071470"(cellular response to osmotic stress)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|refseq:NP_014704.1|sgd:S000005587|mint:P19454|dip:DIP-1038N|ensembl:YOR061W(identity) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) - crc64:30E214BD852824D0 crc64:9ACA8D285E6990AF figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:E39eioYivVEqVSUhL99a2iGvisg559292 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rigid:LTXHUvkEIYJNbSvfGCKF2WAFdEU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53743 uniprotkb:Q06344 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691878|imex:IM-25795-33 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) - crc64:5F38B88CDEEFC01F crc64:A16FB043D0ED86B7 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rigid:EnRauLpyFEbme4mqpuVE89OW3ng false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06344 uniprotkb:P53743 intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691890|imex:IM-25795-697 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) - crc64:A16FB043D0ED86B7 crc64:5F38B88CDEEFC01F figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rigid:EnRauLpyFEbme4mqpuVE89OW3ng false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47083 uniprotkb:P53941 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W intact:EBI-9243|ensemblfungi:YNL075W|uniprotkb:D6W1A4 psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:imp4_yeast(display_long)|uniprotkb:IMP4(gene name)|psi-mi:IMP4(display_short)|uniprotkb:YNL075W(locus name)|uniprotkb:N2353(orf name)|uniprotkb:Interacting with MPP10 protein 4(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691902|imex:IM-25795-35 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) ensemblfungi:YNL075W(gene)|ensemblfungi:YNL075W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|sgd:S000005019|refseq:NP_014324.3|reactome:R-SCE-6791226|dip:DIP-4362N|ensembl:YNL075W(identity) - crc64:DEAF52FC003A0FFD - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rogid:vbv+Sx/noAJOmIh7OYonw2J9ckI559292 rigid:OaPu5bl1RoAsR4nScshs8YR3V5o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53941 uniprotkb:P47083 intact:EBI-9243|ensemblfungi:YNL075W|uniprotkb:D6W1A4 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:imp4_yeast(display_long)|uniprotkb:IMP4(gene name)|psi-mi:IMP4(display_short)|uniprotkb:YNL075W(locus name)|uniprotkb:N2353(orf name)|uniprotkb:Interacting with MPP10 protein 4(gene name synonym) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691914|imex:IM-25795-597 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YNL075W(gene)|ensemblfungi:YNL075W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|sgd:S000005019|refseq:NP_014324.3|reactome:R-SCE-6791226|dip:DIP-4362N|ensembl:YNL075W(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - - crc64:DEAF52FC003A0FFD figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vbv+Sx/noAJOmIh7OYonw2J9ckI559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:OaPu5bl1RoAsR4nScshs8YR3V5o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P47083 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691926|imex:IM-25795-179 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:9278BF873834FC7E crc64:DEAF52FC003A0FFD figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:imE8PJqkQbN71UY+uoDlpxf3jjg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P15646 uniprotkb:P39990 intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W intact:EBI-12032|ensemblfungi:YEL026W|uniprotkb:D3DLM2 psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:snu13_yeast(display_long)|uniprotkb:YEL026W(locus name)|uniprotkb:SNU13(gene name)|psi-mi:SNU13(display_short)|uniprotkb:Small nuclear ribonucleoprotein-associated protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691938|imex:IM-25795-37 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL014W(identity) ensemblfungi:YEL026W(gene)|ensemblfungi:YEL026W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030621"(U4 snRNA binding)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:1905216"(positive regulation of RNA binding)|interpro:IPR002415(High mobility group-like nuclear protein)|interpro:IPR004037(Ribosomal protein L7Ae)|interpro:IPR004038(Ribosomal protein L7Ae/L30e/S12e/Gadd45)|interpro:IPR018492|interpro:IPR029064|rcsb pdb:1ZWZ|rcsb pdb:2ALE|rcsb pdb:3JCM|go:"GO:0005654"(nucleoplasm)|rcsb pdb:5GAN|rcsb pdb:5GAP|rcsb pdb:5NRL|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|rcsb pdb:4NUT|reactome:R-SCE-6791226|refseq:NP_010888.1|sgd:S000000752|mint:P39990|dip:DIP-2870N|ensembl:YEL026W(identity) - crc64:56A8B958A7B6066E crc64:4489780153E8F182 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 rogid:4C07wkvZ4Nts4Oxw4/L7QMkwcmE559292 rigid:A3Ap9NHCHyCKpAjAxo3CPLN/yqY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02931 uniprotkb:P42945 intact:EBI-37773|uniprotkb:D6W3P1|ensemblfungi:YPL126W intact:EBI-1884|uniprotkb:D6VW75|ensemblfungi:YJL109C psi-mi:utp17_yeast(display_long)|uniprotkb:NAN1(gene name)|psi-mi:NAN1(display_short)|uniprotkb:UTP17(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 17(gene name synonym)|uniprotkb:U three protein 17(gene name synonym)|uniprotkb:U3 protein 17 required for transcription(gene name synonym)|uniprotkb:YPL126W(locus name) psi-mi:utp10_yeast(display_long)|uniprotkb:UTP10(gene name)|psi-mi:UTP10(display_short)|uniprotkb:t-UTP10(gene name synonym)|uniprotkb:U three protein 10(gene name synonym)|uniprotkb:U3 protein 10 required for transcription(gene name synonym)|uniprotkb:J0808(orf name)|uniprotkb:YJL109C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691950|imex:IM-25795-397 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015199.1|sgd:S000006047|dip:DIP-3999N|mint:Q02931|ensemblfungi:YPL126W(gene)|ensemblfungi:YPL126W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPL126W(identity) refseq:NP_012426.1|sgd:S000003645|dip:DIP-6466N|mint:P42945|ensemblfungi:YJL109C(gene)|ensemblfungi:YJL109C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012954(BP28, C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR022125|interpro:IPR040191|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL109C(identity) - crc64:F4E3687BD328230E crc64:064480D1D249B241 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:IwajTHwER9UA233SxhHd4/5Tmu0559292 rogid:c7sxmixQnRLFmjuUMDkqZ260ebg559292 rigid:+c1LDytWZUaERgDJCtgRN1bfFY4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12339 uniprotkb:Q12339 intact:EBI-30231|uniprotkb:D6W270|ensemblfungi:YOR004W intact:EBI-30231|uniprotkb:D6W270|ensemblfungi:YOR004W psi-mi:utp23_yeast(display_long)|uniprotkb:U3 small nucleolar RNA-associated protein 23(gene name synonym)|uniprotkb:U three protein 23(gene name synonym)|uniprotkb:UTP23(gene name)|psi-mi:UTP23(display_short)|uniprotkb:YOR004W(locus name) psi-mi:utp23_yeast(display_long)|uniprotkb:U3 small nucleolar RNA-associated protein 23(gene name synonym)|uniprotkb:U three protein 23(gene name synonym)|uniprotkb:UTP23(gene name)|psi-mi:UTP23(display_short)|uniprotkb:YOR004W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691542|imex:IM-25795-593 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014646.1|sgd:S000005530|dip:DIP-4352N|mint:Q12339|ensemblfungi:YOR004W(gene)|ensemblfungi:YOR004W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0032040"(small-subunit processome)|go:"GO:0070181"(small ribosomal subunit rRNA binding)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|rcsb pdb:4MJ7|ensembl:YOR004W(identity) refseq:NP_014646.1|sgd:S000005530|dip:DIP-4352N|mint:Q12339|ensemblfungi:YOR004W(gene)|ensemblfungi:YOR004W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0032040"(small-subunit processome)|go:"GO:0070181"(small ribosomal subunit rRNA binding)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|rcsb pdb:4MJ7|ensembl:YOR004W(identity) - crc64:27D00C72F6B492F6 crc64:27D00C72F6B492F6 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:OvURSlkfCuWUay/vbYqayjai9/A559292 rogid:OvURSlkfCuWUay/vbYqayjai9/A559292 rigid:lXmx1973hNQkYRlYM9C1d0gEQYA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53317 uniprotkb:Q12136 intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691554|imex:IM-25795-673 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - - crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:gxm/qAxlZejWNfRo5R2w+WlLVps false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:Q12136 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691566|imex:IM-25795-675 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:AAFA78B5F6215D89 crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:zyinO05tIjRaDvaBib9IKj07V0A false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53251 uniprotkb:Q12136 intact:EBI-23221|ensemblfungi:YGR081C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:slx9_yeast(display_long)|uniprotkb:YGR081C(locus name)|uniprotkb:SLX9(gene name)|psi-mi:SLX9(display_short) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691578|imex:IM-25795-471 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003313|refseq:NP_011595.3|dip:DIP-4723N|mint:P53251|ensemblfungi:YGR081C(gene)|ensemblfungi:YGR081C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0051880"(G-quadruplex DNA binding)|interpro:IPR028160|ensembl:YGR081C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - - crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:Kx6WAtNZyIgHtsPoSOLxBCcnROA559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:o1n/GCZkWdYcJTcVd3ceRagxg/4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36009 uniprotkb:Q02354 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691614|imex:IM-25795-277 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - crc64:AAFA78B5F6215D89 crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:3sXS6wNRvVCxSDpTTA18CaOj7MA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:Q04177 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691602|imex:IM-25795-389 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - crc64:9A2B5C885493D7D3 crc64:7A6F60C7C6F46C2A figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:24ckA3funOyhrnYw//H+HkD0exs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53254 uniprotkb:Q12136 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691590|imex:IM-25795-473 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:9A2B5C885493D7D3 crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:eBIZPe+2A0qZuHpi7Y/SdlKeZPs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12220 uniprotkb:Q05946 intact:EBI-5896|uniprotkb:Q05386|uniprotkb:D6VYC4|ensemblfungi:YLR129W intact:EBI-34702|uniprotkb:D6VYM2|ensemblfungi:YLR222C psi-mi:utp12_yeast(display_long)|uniprotkb:DIP2(gene name)|psi-mi:DIP2(display_short)|uniprotkb:YLR129W(locus name)|uniprotkb:L9233.1(orf name)|uniprotkb:L3116(orf name)|uniprotkb:UTP12(gene name synonym)|uniprotkb:U three protein 12(gene name synonym)|uniprotkb:DOM34-interacting protein 2(gene name synonym) psi-mi:utp13_yeast(display_long)|uniprotkb:UTP13(gene name)|psi-mi:UTP13(display_short)|uniprotkb:U three protein 13(gene name synonym)|uniprotkb:YLR222C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691985|imex:IM-25795-799 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013230.1|sgd:S000004119|dip:DIP-6494N|mint:Q12220|ensemblfungi:YLR129W(gene)|ensemblfungi:YLR129W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR129W(identity) refseq:NP_013323.1|sgd:S000004212|mint:Q05946|dip:DIP-4790N|ensemblfungi:YLR222C(gene)|ensemblfungi:YLR222C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR013934(Small-subunit processome, Utp13)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR222C(identity) - crc64:7D9AEC7AF6A9C740 crc64:A3DEA4288917027D figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:8Cz4O8hzaHCSq72kVSptQqDE94M559292 rogid:ODH5ePQUIivfhIrcLu9OwoWowI8559292 rigid:GztrTrlffrPUiY5OXwHnLVOzKLc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12220 uniprotkb:Q05946 intact:EBI-5896|uniprotkb:Q05386|uniprotkb:D6VYC4|ensemblfungi:YLR129W intact:EBI-34702|uniprotkb:D6VYM2|ensemblfungi:YLR222C psi-mi:utp12_yeast(display_long)|uniprotkb:DIP2(gene name)|psi-mi:DIP2(display_short)|uniprotkb:YLR129W(locus name)|uniprotkb:L9233.1(orf name)|uniprotkb:L3116(orf name)|uniprotkb:UTP12(gene name synonym)|uniprotkb:U three protein 12(gene name synonym)|uniprotkb:DOM34-interacting protein 2(gene name synonym) psi-mi:utp13_yeast(display_long)|uniprotkb:UTP13(gene name)|psi-mi:UTP13(display_short)|uniprotkb:U three protein 13(gene name synonym)|uniprotkb:YLR222C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691973|imex:IM-25795-479 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013230.1|sgd:S000004119|dip:DIP-6494N|mint:Q12220|ensemblfungi:YLR129W(gene)|ensemblfungi:YLR129W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR129W(identity) refseq:NP_013323.1|sgd:S000004212|mint:Q05946|dip:DIP-4790N|ensemblfungi:YLR222C(gene)|ensemblfungi:YLR222C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR013934(Small-subunit processome, Utp13)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR222C(identity) - crc64:7D9AEC7AF6A9C740 crc64:A3DEA4288917027D figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:8Cz4O8hzaHCSq72kVSptQqDE94M559292 rogid:ODH5ePQUIivfhIrcLu9OwoWowI8559292 rigid:GztrTrlffrPUiY5OXwHnLVOzKLc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02931 uniprotkb:P53276 intact:EBI-37773|uniprotkb:D6W3P1|ensemblfungi:YPL126W intact:EBI-23301|uniprotkb:D6VUR0|ensemblfungi:YGR128C psi-mi:utp17_yeast(display_long)|uniprotkb:NAN1(gene name)|psi-mi:NAN1(display_short)|uniprotkb:UTP17(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 17(gene name synonym)|uniprotkb:U three protein 17(gene name synonym)|uniprotkb:U3 protein 17 required for transcription(gene name synonym)|uniprotkb:YPL126W(locus name) psi-mi:utp8_yeast(display_long)|uniprotkb:UTP8(gene name)|psi-mi:UTP8(display_short)|uniprotkb:t-UTP8(gene name synonym)|uniprotkb:U three protein 8(gene name synonym)|uniprotkb:U3 protein 8 required for transcription(gene name synonym)|uniprotkb:YGR128C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692093|imex:IM-25795-399 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015199.1|sgd:S000006047|dip:DIP-3999N|mint:Q02931|ensemblfungi:YPL126W(gene)|ensemblfungi:YPL126W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPL126W(identity) sgd:S000003360|refseq:NP_011644.3|dip:DIP-6747N|mint:P53276|ensemblfungi:YGR128C(gene)|ensemblfungi:YGR128C_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR018843|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YGR128C(identity) - crc64:F4E3687BD328230E crc64:6F5AE1492F841F49 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:IwajTHwER9UA233SxhHd4/5Tmu0559292 rogid:dG2UtBMuPQujwdovAL/FDjpqps0559292 rigid:8KlTNa6vuN8wc46WWuhQed6+8pM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02354 uniprotkb:Q02354 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692081|imex:IM-25795-599 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - crc64:60FD2E0E1B3B79B3 crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:XRWvLC97bFFETHPIhfZ0DTNCpvE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:Q02354 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692069|imex:IM-25795-295 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - crc64:9278BF873834FC7E crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:KpuzxdO5ST9bP0SGKIUEDkgxcV4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06078 uniprotkb:Q02354 intact:EBI-359|uniprotkb:D6VZ43|ensemblfungi:YLR409C intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:utp21_yeast(display_long)|uniprotkb:YLR409C(locus name)|uniprotkb:L8084.22(orf name)|uniprotkb:UTP21(gene name)|psi-mi:UTP21(display_short)|uniprotkb:U three protein 21(gene name synonym) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692057|imex:IM-25795-499 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004401|refseq:NP_013513.3|dip:DIP-6416N|mint:Q06078|ensemblfungi:YLR409C(gene)|ensemblfungi:YLR409C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR007319(Small-subunit processome, Utp21)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|rcsb pdb:4HNX|rcsb pdb:4NSX|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YLR409C(identity) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) - crc64:F1F856EF28369351 crc64:60FD2E0E1B3B79B3 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:p8cVdV7LI9hwgOSJSz2SUk+Z6Aw559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:ut+DfnZohAPa62tIcIGZ4PYI/aA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40498 uniprotkb:Q12136 intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692033|imex:IM-25795-293 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - - crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:9n0DRJjgZpVuLnzcxNoqG5x0IkE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47083 uniprotkb:Q12136 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692021|imex:IM-25795-497 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:DEAF52FC003A0FFD crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:imE8PJqkQbN71UY+uoDlpxf3jjg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:P40498 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692009|imex:IM-25795-291 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - crc64:9278BF873834FC7E - figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:9n0DRJjgZpVuLnzcxNoqG5x0IkE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P42945 uniprotkb:Q02931 intact:EBI-1884|uniprotkb:D6VW75|ensemblfungi:YJL109C intact:EBI-37773|uniprotkb:D6W3P1|ensemblfungi:YPL126W psi-mi:utp10_yeast(display_long)|uniprotkb:UTP10(gene name)|psi-mi:UTP10(display_short)|uniprotkb:t-UTP10(gene name synonym)|uniprotkb:U three protein 10(gene name synonym)|uniprotkb:U3 protein 10 required for transcription(gene name synonym)|uniprotkb:J0808(orf name)|uniprotkb:YJL109C(locus name) psi-mi:utp17_yeast(display_long)|uniprotkb:NAN1(gene name)|psi-mi:NAN1(display_short)|uniprotkb:UTP17(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 17(gene name synonym)|uniprotkb:U three protein 17(gene name synonym)|uniprotkb:U3 protein 17 required for transcription(gene name synonym)|uniprotkb:YPL126W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16691997|imex:IM-25795-39 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012426.1|sgd:S000003645|dip:DIP-6466N|mint:P42945|ensemblfungi:YJL109C(gene)|ensemblfungi:YJL109C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012954(BP28, C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR022125|interpro:IPR040191|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL109C(identity) refseq:NP_015199.1|sgd:S000006047|dip:DIP-3999N|mint:Q02931|ensemblfungi:YPL126W(gene)|ensemblfungi:YPL126W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPL126W(identity) - crc64:064480D1D249B241 crc64:F4E3687BD328230E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:c7sxmixQnRLFmjuUMDkqZ260ebg559292 rogid:IwajTHwER9UA233SxhHd4/5Tmu0559292 rigid:+c1LDytWZUaERgDJCtgRN1bfFY4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38882 uniprotkb:P53276 intact:EBI-24892|uniprotkb:D3DLE4|ensemblfungi:YHR196W intact:EBI-23301|uniprotkb:D6VUR0|ensemblfungi:YGR128C psi-mi:utp9_yeast(display_long)|uniprotkb:t-UTP9(gene name synonym)|uniprotkb:UTP9(gene name)|psi-mi:UTP9(display_short)|uniprotkb:U three protein 9(gene name synonym)|uniprotkb:U3 protein 9 required for transcription(gene name synonym)|uniprotkb:YHR196W(locus name) psi-mi:utp8_yeast(display_long)|uniprotkb:UTP8(gene name)|psi-mi:UTP8(display_short)|uniprotkb:t-UTP8(gene name synonym)|uniprotkb:U three protein 8(gene name synonym)|uniprotkb:U3 protein 8 required for transcription(gene name synonym)|uniprotkb:YGR128C(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692105|imex:IM-25795-297 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012066.1|sgd:S000001239|mint:P38882|dip:DIP-6634N|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|ensemblfungi:YHR196W(gene)|ensemblfungi:YHR196W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR015943(WD40/YVTN repeat-like)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|ensembl:YHR196W(identity) sgd:S000003360|refseq:NP_011644.3|dip:DIP-6747N|mint:P53276|ensemblfungi:YGR128C(gene)|ensemblfungi:YGR128C_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR018843|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YGR128C(identity) - crc64:0C482C6A32855FF1 crc64:6F5AE1492F841F49 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:cjrwDuKyMEgU0Zgn28yzNi6haV4559292 rogid:dG2UtBMuPQujwdovAL/FDjpqps0559292 rigid:27wHldw0PK5/5pv+jI6DT23tC24 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53276 uniprotkb:P38882 intact:EBI-23301|uniprotkb:D6VUR0|ensemblfungi:YGR128C intact:EBI-24892|uniprotkb:D3DLE4|ensemblfungi:YHR196W psi-mi:utp8_yeast(display_long)|uniprotkb:UTP8(gene name)|psi-mi:UTP8(display_short)|uniprotkb:t-UTP8(gene name synonym)|uniprotkb:U three protein 8(gene name synonym)|uniprotkb:U3 protein 8 required for transcription(gene name synonym)|uniprotkb:YGR128C(locus name) psi-mi:utp9_yeast(display_long)|uniprotkb:t-UTP9(gene name synonym)|uniprotkb:UTP9(gene name)|psi-mi:UTP9(display_short)|uniprotkb:U three protein 9(gene name synonym)|uniprotkb:U3 protein 9 required for transcription(gene name synonym)|uniprotkb:YHR196W(locus name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692117|imex:IM-25795-299 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003360|refseq:NP_011644.3|dip:DIP-6747N|mint:P53276|ensemblfungi:YGR128C(gene)|ensemblfungi:YGR128C_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR018843|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YGR128C(identity) refseq:NP_012066.1|sgd:S000001239|mint:P38882|dip:DIP-6634N|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|ensemblfungi:YHR196W(gene)|ensemblfungi:YHR196W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR015943(WD40/YVTN repeat-like)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|ensembl:YHR196W(identity) - crc64:6F5AE1492F841F49 crc64:0C482C6A32855FF1 figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:dG2UtBMuPQujwdovAL/FDjpqps0559292 rogid:cjrwDuKyMEgU0Zgn28yzNi6haV4559292 rigid:27wHldw0PK5/5pv+jI6DT23tC24 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12136 uniprotkb:Q12136 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0397"(two hybrid array) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692045|imex:IM-25795-699 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:9278BF873834FC7E crc64:9278BF873834FC7E figure legend:Table S2, Table S3, Fig. 2 B, Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:xogpJJiSsaGRWDiIH871Ivoj5YM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53131 uniprotkb:P53335 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692784|imex:IM-25795-651 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|ensembl:YGL120C(identity) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) - crc64:DA8A085EC50FF430 crc64:D5AB6EB2C129922D figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rigid:NOZQ3DA+l7F4sZCDZdc572zdxlM false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53254 uniprotkb:Q06344 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692766|imex:IM-25795-549 author score:0.87 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) - crc64:9A2B5C885493D7D3 crc64:A16FB043D0ED86B7 figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rigid:f6+3JfU6q8CWzVM1bU7osk+ynoM false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53743 uniprotkb:Q06344 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692748|imex:IM-25795-547 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) - crc64:5F38B88CDEEFC01F crc64:A16FB043D0ED86B7 figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rigid:EnRauLpyFEbme4mqpuVE89OW3ng false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P20448 uniprotkb:Q06344 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-34121|uniprotkb:D6VSZ4|ensemblfungi:YDR365C psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:esf1_yeast(display_long)|uniprotkb:ESF1(gene name)|psi-mi:ESF1(display_short)|uniprotkb:18S rRNA factor 1(gene name synonym)|uniprotkb:YDR365C(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692730|imex:IM-25795-233 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_010653.1|sgd:S000002773|mint:Q06344|dip:DIP-5248N|ensemblfungi:YDR365C(gene)|ensemblfungi:YDR365C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|interpro:IPR012580(NUC153)|interpro:IPR039754|ensembl:YDR365C(identity) - - crc64:A16FB043D0ED86B7 figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:b+EgEqRIl3bjezRrCv42j78ryTA559292 rigid:DBrijVFgKPdZQVTUFMYIs0DQpuo false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53254 uniprotkb:P38333 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692712|imex:IM-25795-111 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - crc64:9A2B5C885493D7D3 crc64:399A415131294637 figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:ETiniCsVkLMWgBPyiXjrbpqTJy8 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12481 uniprotkb:P38333 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692694|imex:IM-25795-775 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - - crc64:399A415131294637 figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:xiQl3bmoIyh9HMMrblf+pbW3GOs false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53941 uniprotkb:P38333 intact:EBI-9243|ensemblfungi:YNL075W|uniprotkb:D6W1A4 intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:imp4_yeast(display_long)|uniprotkb:IMP4(gene name)|psi-mi:IMP4(display_short)|uniprotkb:YNL075W(locus name)|uniprotkb:N2353(orf name)|uniprotkb:Interacting with MPP10 protein 4(gene name synonym) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692676|imex:IM-25795-857 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YNL075W(gene)|ensemblfungi:YNL075W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|sgd:S000005019|refseq:NP_014324.3|reactome:R-SCE-6791226|dip:DIP-4362N|ensembl:YNL075W(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - - crc64:399A415131294637 figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vbv+Sx/noAJOmIh7OYonw2J9ckI559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:NPT/uYwpQ0Af+A+G0LSyzNC2y3k false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P32899 uniprotkb:P38333 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692658|imex:IM-25795-759 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - crc64:2CA16A3425691DBD crc64:399A415131294637 figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:XUIymDzC+VxXWyMYbdPYOfNgqsY false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P36009 uniprotkb:P38333 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-6482|uniprotkb:D6VQP3|ensemblfungi:YBR247C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:enp1_yeast(display_long)|uniprotkb:ENP1(gene name)|psi-mi:ENP1(display_short)|uniprotkb:MEG1(gene name synonym)|uniprotkb:YBR247C(locus name)|uniprotkb:YBR1635(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692640|imex:IM-25795-109 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_009806.3|sgd:S000000451|mint:P38333|dip:DIP-6612N|ensemblfungi:YBR247C(gene)|ensemblfungi:YBR247C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR007955(Bystin)|rcsb pdb:5WLC|rcsb pdb:5WWO|rcsb pdb:5WYJ|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6RBD|rcsb pdb:6Y7C|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBR247C(identity) - crc64:AAFA78B5F6215D89 crc64:399A415131294637 figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:hRWEGOAGLPtihuRsJqQDpZyNtcE559292 rigid:YL5aI0XUJeN1QFyqrHzP8FmDo88 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53254 uniprotkb:P36009 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692622|imex:IM-25795-757 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - crc64:9A2B5C885493D7D3 crc64:AAFA78B5F6215D89 figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:XYLQfzWf/yxjRTe+2DYW73QZgXE false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53941 uniprotkb:P36009 intact:EBI-9243|ensemblfungi:YNL075W|uniprotkb:D6W1A4 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:imp4_yeast(display_long)|uniprotkb:IMP4(gene name)|psi-mi:IMP4(display_short)|uniprotkb:YNL075W(locus name)|uniprotkb:N2353(orf name)|uniprotkb:Interacting with MPP10 protein 4(gene name synonym) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692604|imex:IM-25795-107 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YNL075W(gene)|ensemblfungi:YNL075W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|sgd:S000005019|refseq:NP_014324.3|reactome:R-SCE-6791226|dip:DIP-4362N|ensembl:YNL075W(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - - crc64:AAFA78B5F6215D89 figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vbv+Sx/noAJOmIh7OYonw2J9ckI559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:xfXUHw1stILp7bSIin74/3exZ0E false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P36009 uniprotkb:P36009 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692586|imex:IM-25795-855 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) - crc64:AAFA78B5F6215D89 crc64:AAFA78B5F6215D89 figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:x4H1EuNfObU0GkxbMXJnvrxyS5g false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12136 uniprotkb:P53317 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692568|imex:IM-25795-231 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) - crc64:9278BF873834FC7E - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rigid:gxm/qAxlZejWNfRo5R2w+WlLVps false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P36009 uniprotkb:P53317 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-23590|uniprotkb:D6VV31|ensemblfungi:YGR251W psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:nop19_yeast(display_long)|uniprotkb:NOP19(gene name)|psi-mi:NOP19(display_short)|uniprotkb:YGR251W(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692550|imex:IM-25795-649 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_011767.3|sgd:S000003483|dip:DIP-5523N|mint:P53317|ensemblfungi:YGR251W(gene)|ensemblfungi:YGR251W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR022592|ensembl:YGR251W(identity) - crc64:AAFA78B5F6215D89 - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:H/kxieFshHI6qWTL0EBqWuHQ5GE559292 rigid:tTn5GeB2WSVukx5zyJVWScA3TZ0 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53254 uniprotkb:P38719 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-5633|uniprotkb:D3DLB8|ensemblfungi:YHR169W psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:dbp8_yeast(display_long)|uniprotkb:YHR169W(locus name)|uniprotkb:DBP8(gene name)|psi-mi:DBP8(display_short)|uniprotkb:DEAD box protein 8(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692532|imex:IM-25795-359 author score:0.68 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_012039.1|sgd:S000001212|dip:DIP-5628N|mint:P38719|ensemblfungi:YHR169W(gene)|ensemblfungi:YHR169W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YHR169W(identity) - crc64:9A2B5C885493D7D3 crc64:B0451EB85247372C figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:mnaGKGPAjFq7/Xfe7pSa0B4LEVE559292 rigid:/787fvEctwa7dFbmHczQU2Mc2Mk false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53743 uniprotkb:P38719 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-5633|uniprotkb:D3DLB8|ensemblfungi:YHR169W psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:dbp8_yeast(display_long)|uniprotkb:YHR169W(locus name)|uniprotkb:DBP8(gene name)|psi-mi:DBP8(display_short)|uniprotkb:DEAD box protein 8(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692514|imex:IM-25795-229 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_012039.1|sgd:S000001212|dip:DIP-5628N|mint:P38719|ensemblfungi:YHR169W(gene)|ensemblfungi:YHR169W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YHR169W(identity) - crc64:5F38B88CDEEFC01F crc64:B0451EB85247372C figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:mnaGKGPAjFq7/Xfe7pSa0B4LEVE559292 rigid:kesK2nZbjhbrtFjS9hPhE/L2yvk false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P36009 uniprotkb:P38719 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-5633|uniprotkb:D3DLB8|ensemblfungi:YHR169W psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:dbp8_yeast(display_long)|uniprotkb:YHR169W(locus name)|uniprotkb:DBP8(gene name)|psi-mi:DBP8(display_short)|uniprotkb:DEAD box protein 8(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692496|imex:IM-25795-853 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_012039.1|sgd:S000001212|dip:DIP-5628N|mint:P38719|ensemblfungi:YHR169W(gene)|ensemblfungi:YHR169W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YHR169W(identity) - crc64:AAFA78B5F6215D89 crc64:B0451EB85247372C figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:mnaGKGPAjFq7/Xfe7pSa0B4LEVE559292 rigid:vxo/B1XtVz56JBipiryy2IciA2o false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12136 uniprotkb:P20448 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692478|imex:IM-25795-851 author score:0.8 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) - crc64:9278BF873834FC7E - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rigid:1l65zzw6IhclRYBqfbmpR7aOVHY false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53743 uniprotkb:P20448 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692460|imex:IM-25795-849 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) - crc64:5F38B88CDEEFC01F - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rigid:4mGVwEkj/JN2eXmAXqeMLlJBf88 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P20448 uniprotkb:P20448 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692442|imex:IM-25795-755 author score:0.78 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) - - - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rigid:bSF2gsdmYDSRwWHPhvM85SniEWI false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P25368 uniprotkb:P53254 intact:EBI-16019|uniprotkb:D6VQY4|ensemblfungi:YCL031C intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:rrp7_yeast(display_long)|uniprotkb:RRP7(gene name)|psi-mi:RRP7(display_short)|uniprotkb:YCL184(orf name)|uniprotkb:YCL31C(orf name)|uniprotkb:YCL031C(locus name) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692424|imex:IM-25795-105 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009899.1|sgd:S000000536|interpro:IPR040446|interpro:IPR040447|rcsb pdb:2MBY|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YCL031C(gene)|ensemblfungi:YCL031C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR024326|dip:DIP-4974N|mint:P25368|ensembl:YCL031C(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - crc64:768F43B0057788F2 crc64:9A2B5C885493D7D3 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:fovz4jwoSdxp4Yh7KCDYpv3f0mc559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:IT1nRY6ODuY9yxj2KQpRSW7nxU4 false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P20448 uniprotkb:P53254 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692406|imex:IM-25795-103 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) - - crc64:9A2B5C885493D7D3 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:Zle7B9YPzxGT5+k62pTfNApSJvg false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12099 uniprotkb:Q06132 intact:EBI-6776|uniprotkb:D6VS07|ensemblfungi:YDR021W intact:EBI-34377|uniprotkb:D6VYX6|ensemblfungi:YLR336C psi-mi:fal1_yeast(display_long)|uniprotkb:FAL1(gene name)|psi-mi:FAL1(display_short)|uniprotkb:YDR021W(locus name)|uniprotkb:YD9335.07(orf name)|uniprotkb:PZC399(orf name)|uniprotkb:Translation initiation factor four A-like protein 1(gene name synonym) psi-mi:sgd1_yeast(display_long)|uniprotkb:SGD1(gene name)|psi-mi:SGD1(display_short)|uniprotkb:YLR336C(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692388|imex:IM-25795-227 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010304.3|sgd:S000002428|dip:DIP-4516N|mint:Q12099|ensemblfungi:YDR021W(gene)|ensemblfungi:YDR021W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097078"(FAL1-SGD1 complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|reactome:R-SCE-429947|reactome:R-SCE-975957|ensembl:YDR021W(identity) refseq:NP_013440.1|sgd:S000004328|mint:Q06132|dip:DIP-6333N|ensemblfungi:YLR336C(gene)|ensemblfungi:YLR336C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006972"(hyperosmotic response)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0097078"(FAL1-SGD1 complex)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|ensembl:YLR336C(identity) - crc64:76A3441728D21253 crc64:8EEFDB8258407FF3 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpSu5iJlZBXbp7bqquc7csKCN+Y559292 rogid:FxZCxGejbcvEs/J2h1HEaWeVZLQ559292 rigid:9lpXxcKQRLZ1wpnG+8C0GJCn9mU false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12136 uniprotkb:P47083 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692370|imex:IM-25795-357 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:9278BF873834FC7E crc64:DEAF52FC003A0FFD figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:imE8PJqkQbN71UY+uoDlpxf3jjg false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53941 uniprotkb:P47083 intact:EBI-9243|ensemblfungi:YNL075W|uniprotkb:D6W1A4 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:imp4_yeast(display_long)|uniprotkb:IMP4(gene name)|psi-mi:IMP4(display_short)|uniprotkb:YNL075W(locus name)|uniprotkb:N2353(orf name)|uniprotkb:Interacting with MPP10 protein 4(gene name synonym) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692352|imex:IM-25795-647 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YNL075W(gene)|ensemblfungi:YNL075W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|sgd:S000005019|refseq:NP_014324.3|reactome:R-SCE-6791226|dip:DIP-4362N|ensembl:YNL075W(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - - crc64:DEAF52FC003A0FFD figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vbv+Sx/noAJOmIh7OYonw2J9ckI559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:OaPu5bl1RoAsR4nScshs8YR3V5o false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P32899 uniprotkb:P47083 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692334|imex:IM-25795-753 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:2CA16A3425691DBD crc64:DEAF52FC003A0FFD figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:LKcPuhniWXqwiyZvfw9A9I7lwS4 false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12136 uniprotkb:Q03532 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692316|imex:IM-25795-431 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - crc64:9278BF873834FC7E crc64:EE15D51A7F6BE1A2 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:YuY9baobfSipmc+FYp2aI9K/8vM false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12481 uniprotkb:Q03532 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692298|imex:IM-25795-847 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - - crc64:EE15D51A7F6BE1A2 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:dp6UFck7cb3i7f5JMYeZAO89rPo false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53866 uniprotkb:Q03532 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692280|imex:IM-25795-539 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - - crc64:EE15D51A7F6BE1A2 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:UMsPcz6UJcL3FR7PKhHF8I1waNw false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P47083 uniprotkb:Q03532 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692262|imex:IM-25795-639 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - crc64:DEAF52FC003A0FFD crc64:EE15D51A7F6BE1A2 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:eOxUAfq105Yl6HqJbnnAQelYObM false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53743 uniprotkb:Q03532 intact:EBI-28537|uniprotkb:D6W1M9|ensemblfungi:YNR054C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:esf2_yeast(display_long)|uniprotkb:YNR054C(locus name)|uniprotkb:N3491(orf name)|uniprotkb:ESF2(gene name)|psi-mi:ESF2(display_short)|uniprotkb:ABT1(gene name synonym)|uniprotkb:18S rRNA factor 2(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692244|imex:IM-25795-751 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014452.1|sgd:S000005337|dip:DIP-6417N|mint:P53743|ensemblfungi:YNR054C(gene)|ensemblfungi:YNR054C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034462"(small-subunit processome assembly)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034353|interpro:IPR035979|interpro:IPR039119|ensembl:YNR054C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - crc64:5F38B88CDEEFC01F crc64:EE15D51A7F6BE1A2 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:DpGFLD2Mpm+THb0Mr2vBXePdNBk559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:1cr0BviPJbFqai3fTI3ap1ghXJQ false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P20448 uniprotkb:Q03532 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692226|imex:IM-25795-429 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|ensembl:YMR290C(identity) - - crc64:EE15D51A7F6BE1A2 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:7hKEn0LCSXP0h2CSJtZcxM8UbgY false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P43639 uniprotkb:P19454 intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 intact:EBI-9548|ensemblfungi:YOR061W|uniprotkb:D6W2C4 psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:csk22_yeast(display_long)|uniprotkb:CKA2(gene name)|psi-mi:CKA2(display_short)|uniprotkb:YOR29-12(orf name)|uniprotkb:YOR061W(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692208|imex:IM-25795-749 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) ensemblfungi:YOR061W(gene)|ensemblfungi:YOR061W_mRNA(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0071470"(cellular response to osmotic stress)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|refseq:NP_014704.1|sgd:S000005587|mint:P19454|dip:DIP-1038N|ensembl:YOR061W(identity) - crc64:9ACA8D285E6990AF crc64:30E214BD852824D0 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rogid:E39eioYivVEqVSUhL99a2iGvisg559292 rigid:LTXHUvkEIYJNbSvfGCKF2WAFdEU false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53335 uniprotkb:P15790 intact:EBI-23652|uniprotkb:D6VV57|uniprotkb:Q8TG89|intact:EBI-33325|ensemblfungi:YGR280C intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:pxr1_yeast(display_long)|uniprotkb:PXR1(gene name)|psi-mi:PXR1(display_short)|uniprotkb:GNO1(gene name synonym)|uniprotkb:PinX1-related protein 1(gene name synonym)|uniprotkb:G-patch nucleolar protein(gene name synonym)|uniprotkb:YGR280C(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692190|imex:IM-25795-845 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011796.1|sgd:S000003512|dip:DIP-4308N|mint:P53335|ensemblfungi:YGR280C(gene)|ensemblfungi:YGR280C_mRNA(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010521"(telomerase inhibitor activity)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|interpro:IPR000467(D111/G-patch)|ensembl:YGR280C(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:D5AB6EB2C129922D crc64:6A1A7F1BF47250C9 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:SzQtp13uvK3KbuNHyZQPJxKMzwY559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:6HD5UyE20QT0YMUJBlbI3mJ+wwg false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P20448 uniprotkb:P15790 intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692172|imex:IM-25795-225 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|ensembl:YJL033W(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - - crc64:6A1A7F1BF47250C9 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:PTfVqPWlYEi9XpEyZVEH96r8nlo false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P43639 uniprotkb:P15790 intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8 intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692154|imex:IM-25795-427 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N|ensembl:YGL019W(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - crc64:9ACA8D285E6990AF crc64:6A1A7F1BF47250C9 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:CBVMW3krEAcKWK84ijWYT8wM2UY false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12481 uniprotkb:P15790 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7 psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692136|imex:IM-25795-843 author score:0.77 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N|ensembl:YIL035C(identity) - - crc64:6A1A7F1BF47250C9 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292 rigid:hsXWbVr0n5lhxPA6YELobVzA37k false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53254 uniprotkb:Q04177 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693346|imex:IM-25795-439 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - crc64:9A2B5C885493D7D3 crc64:7A6F60C7C6F46C2A figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:24ckA3funOyhrnYw//H+HkD0exs false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12136 uniprotkb:P32899 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692824|imex:IM-25795-375 author score:0.78 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) - crc64:9278BF873834FC7E crc64:2CA16A3425691DBD figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rigid:bB4jfzZzkxbcddzxEErkTtterK0 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q02354 uniprotkb:Q12136 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693310|imex:IM-25795-137 author score:0.76 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:60FD2E0E1B3B79B3 crc64:9278BF873834FC7E figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:KpuzxdO5ST9bP0SGKIUEDkgxcV4 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12136 uniprotkb:Q12136 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693292|imex:IM-25795-239 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:9278BF873834FC7E crc64:9278BF873834FC7E figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:xogpJJiSsaGRWDiIH871Ivoj5YM false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q99207 uniprotkb:Q12136 intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693274|imex:IM-25795-437 author score:0.94 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:F7615D96B02E15DE crc64:9278BF873834FC7E figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:76gShUBKEyMd3EgGdf/N535mLrU false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P25586 uniprotkb:Q12136 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693256|imex:IM-25795-559 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:7A7F964E2C7FD056 crc64:9278BF873834FC7E figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:SLzxx4q3TJTqhNUHQiyt1yVW+LI false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12136 uniprotkb:P40498 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693238|imex:IM-25795-237 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - crc64:9278BF873834FC7E - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:9n0DRJjgZpVuLnzcxNoqG5x0IkE false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53254 uniprotkb:P40498 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693220|imex:IM-25795-861 author score:0.92 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - crc64:9A2B5C885493D7D3 - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:KSBHgZUSEsbC5RXcbPadeHPCuCo false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12481 uniprotkb:P40498 intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693202|imex:IM-25795-557 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - - - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:7kV1IydqW80tgp5SXvhvpNSeNGE false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P47083 uniprotkb:P40498 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693184|imex:IM-25795-779 author score:0.78 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - crc64:DEAF52FC003A0FFD - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:9DrwKV3Eb089ayByGukz3jyaV2k false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P36009 uniprotkb:P40498 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-25113|uniprotkb:D6VVJ6|ensemblfungi:YIL091C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:utp25_yeast(display_long)|uniprotkb:YIL091C(locus name)|uniprotkb:UTP25(gene name)|psi-mi:UTP25(display_short)|uniprotkb:U three protein 25(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693166|imex:IM-25795-435 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_012175.1|sgd:S000001353|mint:P40498|dip:DIP-5629N|ensemblfungi:YIL091C(gene)|ensemblfungi:YIL091C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR010678(Protein of unknown function DUF1253)|interpro:IPR027417|reactome:R-SCE-6791226|ensembl:YIL091C(identity) - crc64:AAFA78B5F6215D89 - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:9OTjSNDfUXoxYLjdDlhobs3AKa8559292 rigid:v85TmG/ySr4HFF1kiuX1rubEGnI false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53254 uniprotkb:Q99207 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693148|imex:IM-25795-235 author score:0.78 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - crc64:9A2B5C885493D7D3 crc64:F7615D96B02E15DE figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:0AX8NRY6Rq+4s/WjLLpM7i+N2Uw false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q06512 uniprotkb:Q99207 intact:EBI-36459|uniprotkb:D6W4E1|ensemblfungi:YPR144C intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:noc4_yeast(display_long)|uniprotkb:NOC4(gene name)|psi-mi:NOC4(display_short)|uniprotkb:UTP19(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 19(gene name synonym)|uniprotkb:U three protein 19(gene name synonym)|uniprotkb:YPR144C(locus name) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693130|imex:IM-25795-659 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015470.1|sgd:S000006348|mint:Q06512|dip:DIP-4555N|ensemblfungi:YPR144C(gene)|ensemblfungi:YPR144C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR005612(CBF)|interpro:IPR027193|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YPR144C(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - - crc64:F7615D96B02E15DE figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:M+Te42uFKtlIFUYnsmPmKzkSCZw559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:3U8wMs7QabM0fj7bmBAg82f00q8 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53254 uniprotkb:P40362 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693112|imex:IM-25795-379 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:9A2B5C885493D7D3 crc64:0FEBD4540CF039DA figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:gtGiyPIpk0nC4Ve82SsGJXdAA+8 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P25586 uniprotkb:P40362 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693094|imex:IM-25795-657 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:7A7F964E2C7FD056 crc64:0FEBD4540CF039DA figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:VtoUtSx5sF0cxIbNqAIvJ/znTxY false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P32899 uniprotkb:P40362 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693076|imex:IM-25795-135 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:2CA16A3425691DBD crc64:0FEBD4540CF039DA figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:EFaAJuTKM0gw+HG0KxBDfzV97S4 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P36009 uniprotkb:P40362 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-4534|uniprotkb:D6VWB4|ensemblfungi:YJL069C psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:utp18_yeast(display_long)|uniprotkb:YJL069C(locus name)|uniprotkb:J1098(orf name)|uniprotkb:HRE594(orf name)|uniprotkb:UTP18(gene name)|psi-mi:UTP18(display_short)|uniprotkb:U three protein 18(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693058|imex:IM-25795-377 author score:0.84 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) refseq:NP_012466.1|sgd:S000003605|dip:DIP-6392N|mint:P40362|ensemblfungi:YJL069C(gene)|ensemblfungi:YJL069C_mRNA(transcript)|go:"GO:0000292"(RNA fragment catabolic process)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL069C(identity) - crc64:AAFA78B5F6215D89 crc64:0FEBD4540CF039DA figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:lmOAbQt7Qj6BTcyEZHjuQ1hFQTM559292 rigid:7uQggD0r5Grv1AVnG5O6yj8giG4 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12136 uniprotkb:Q12481 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-31770|uniprotkb:D6W2Y5|ensemblfungi:YOR287C psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:rrp36_yeast(display_long)|uniprotkb:RRP36(gene name)|psi-mi:RRP36(display_short)|uniprotkb:Ribosomal RNA-processing protein 36(gene name synonym)|uniprotkb:YOR287C(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693040|imex:IM-25795-655 author score:0.94 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) refseq:NP_014930.1|sgd:S000005813|interpro:IPR009292(Protein of unknown function DUF947)|mint:Q12481|ensemblfungi:YOR287C(gene)|ensemblfungi:YOR287C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|reactome:R-SCE-6791226|ensembl:YOR287C(identity) - crc64:9278BF873834FC7E - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:q1HXpxSZvQpnhGzVXmnBNEfWTzI559292 rigid:OjaMCjAN1XQXBDSL5D+2Ps/y2Gw false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53254 uniprotkb:P45818 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-15686|uniprotkb:D6VTY1|ensemblfungi:YGL171W psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:rok1_yeast(display_long)|uniprotkb:ROK1(gene name)|psi-mi:ROK1(display_short)|uniprotkb:YGL171W(locus name)|uniprotkb:G1651(orf name)|uniprotkb:Rescuer of KEM1 protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693022|imex:IM-25795-555 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_011344.1|sgd:S000003139|ensemblfungi:YGL171W(gene)|ensemblfungi:YGL171W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0048254"(snoRNA localization)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR044764|reactome:R-SCE-6791226|dip:DIP-5111N|mint:P45818|ensembl:YGL171W(identity) - crc64:9A2B5C885493D7D3 crc64:CACB950B8A15D5A2 figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:Id8imuuTKPSw1r4qwGClHrYAxpQ559292 rigid:JLz1Bg166X8wdybovJHtiYsKR1I false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P36009 uniprotkb:P53131 intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693004|imex:IM-25795-653 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|ensembl:YKL078W(identity) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|ensembl:YGL120C(identity) - crc64:AAFA78B5F6215D89 crc64:DA8A085EC50FF430 figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rigid:g4wlduUb2SJXPBz72a0vqPrc7FM false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53254 uniprotkb:P53866 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692986|imex:IM-25795-119 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:9A2B5C885493D7D3 - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:cisMXSj1QOTgyWSiK0gKZ3jgcqc false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53131 uniprotkb:P53866 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692968|imex:IM-25795-553 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|ensembl:YGL120C(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:DA8A085EC50FF430 - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:YccIs1EqaSuCfIjPqHJQv8aJqP0 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P25586 uniprotkb:P53866 intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692950|imex:IM-25795-433 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:7A7F964E2C7FD056 - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:UO8W3l3sKo1zwmaJ0XAPBw5D+AU false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P32899 uniprotkb:P53866 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 intact:EBI-29168|uniprotkb:D6W0W6|ensemblfungi:YNL224C psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:sqs1_yeast(display_long)|uniprotkb:Squelch of splicing suppression protein 1(gene name synonym)|uniprotkb:YNL224C(locus name)|uniprotkb:N1269(orf name)|uniprotkb:SQS1(gene name)|psi-mi:SQS1(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692932|imex:IM-25795-551 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) refseq:NP_014175.1|sgd:S000005168|dip:DIP-6728N|mint:P53866|ensemblfungi:YNL224C(gene)|ensemblfungi:YNL224C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0051096"(positive regulation of helicase activity)|interpro:IPR000467(D111/G-patch)|interpro:IPR034082|interpro:IPR036867|ensembl:YNL224C(identity) - crc64:2CA16A3425691DBD - figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rogid:1SI9Z4+ileBAQJdISG0uhYtjy4c559292 rigid:Yz+SE7JvHl9XWLINEVEMBlgdvhU false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q02354 uniprotkb:P47083 intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692914|imex:IM-25795-117 author score:0.99 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDR449C(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:60FD2E0E1B3B79B3 crc64:DEAF52FC003A0FFD figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:cHwddnKRAhjNNmuCEz0CDz/F6NY false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53254 uniprotkb:P47083 intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692896|imex:IM-25795-859 author score:0.75 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YGR090W(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:9A2B5C885493D7D3 crc64:DEAF52FC003A0FFD figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:ash0Z7R8OjpMqtUBJWAuTWq0qkA false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P42945 uniprotkb:P47083 intact:EBI-1884|uniprotkb:D6VW75|ensemblfungi:YJL109C intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:utp10_yeast(display_long)|uniprotkb:UTP10(gene name)|psi-mi:UTP10(display_short)|uniprotkb:t-UTP10(gene name synonym)|uniprotkb:U three protein 10(gene name synonym)|uniprotkb:U3 protein 10 required for transcription(gene name synonym)|uniprotkb:J0808(orf name)|uniprotkb:YJL109C(locus name) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692878|imex:IM-25795-115 author score:0.7 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012426.1|sgd:S000003645|dip:DIP-6466N|mint:P42945|ensemblfungi:YJL109C(gene)|ensemblfungi:YJL109C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012954(BP28, C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR022125|interpro:IPR040191|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YJL109C(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:064480D1D249B241 crc64:DEAF52FC003A0FFD figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:c7sxmixQnRLFmjuUMDkqZ260ebg559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:U3HiLc0w7BaXywk9/HsjwoE75/Q false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P47083 uniprotkb:P47083 intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692860|imex:IM-25795-777 author score:0.65 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:DEAF52FC003A0FFD crc64:DEAF52FC003A0FFD figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:dsTl0QO/haZFiuXYOpRntqmcawQ false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12136 uniprotkb:P47083 intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16692842|imex:IM-25795-113 author score:1 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N|ensembl:YJR002W(identity) - crc64:9278BF873834FC7E crc64:DEAF52FC003A0FFD figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 rigid:imE8PJqkQbN71UY+uoDlpxf3jjg false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P32899 uniprotkb:Q04177 intact:EBI-9237|ensemblfungi:YHR148W|uniprotkb:D3DL97 intact:EBI-35844|uniprotkb:D6VT31|ensemblfungi:YDR398W psi-mi:imp3_yeast(display_long)|uniprotkb:IMP3(gene name)|psi-mi:IMP3(display_short)|uniprotkb:Interacting with MPP10 protein 3(gene name synonym)|uniprotkb:YHR148W(locus name) psi-mi:utp5_yeast(display_long)|uniprotkb:U three protein 5(gene name synonym)|uniprotkb:U3 protein 5 required for transcription(gene name synonym)|uniprotkb:D9509.17(orf name)|uniprotkb:YDR398W(locus name)|uniprotkb:UTP5(gene name)|psi-mi:UTP5(display_short)|uniprotkb:t-UTP5(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16693328|imex:IM-25795-259 author score:0.63 - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|ensemblfungi:YHR148W(gene)|ensemblfungi:YHR148W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|go:"GO:0006364"(rRNA processing)|rcsb pdb:7AJT|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001912(Ribosomal protein S4)|interpro:IPR002942(RNA-binding S4)|interpro:IPR022801|interpro:IPR036986|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:7AJU|refseq:NP_012018.1|sgd:S000001191|dip:DIP-5009N|reactome:R-SCE-6791226|ensembl:YHR148W(identity) refseq:NP_010686.1|sgd:S000002806|mint:Q04177|dip:DIP-1317N|ensemblfungi:YDR398W(gene)|ensemblfungi:YDR398W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:6LQS|ensembl:YDR398W(identity) - crc64:2CA16A3425691DBD crc64:7A6F60C7C6F46C2A figure legend:Table S4, Fig. 3A, Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:jXa2/NXLf3eCVaDzxd43PH3XApg559292 rogid:cpoFrHdK29TtGOfAINI5ceEgO3U559292 rigid:IdLIRoqvjNhwdv+kM0bHU+KxXbc false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q05498 uniprotkb:P25586 intact:EBI-30765|uniprotkb:D6VSX1|ensemblfungi:YDR339C intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C psi-mi:fcf1_yeast(display_long)|uniprotkb:FAF1-copurifying factor 1(gene name synonym)|uniprotkb:FCF1(gene name)|psi-mi:FCF1(display_short)|uniprotkb:D9651.9(orf name)|uniprotkb:YDR339C(locus name) psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:"MI:0029"(cosedimentation through density gradient) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-16693371|imex:IM-25795-139 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010626.1|sgd:S000002747|reactome:R-SCE-6791226|dip:DIP-6627N|ensemblfungi:YDR339C(gene)|ensemblfungi:YDR339C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002716(PilT protein, N-terminal)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|interpro:IPR037503|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YDR339C(identity) refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)|ensembl:YCL059C(identity) - crc64:0089AD246BA08473 crc64:7A7F964E2C7FD056 comment:"Glycerol gradient analysis of 42 of the 74 (57%) SPAFs revealed three main classes of sedimentation profiles visualized by western blotting of the tagged proteins. The first class of proteins sedimented in discrete peaks smaller than the SSU processome (examples and full list in Figure 5A; additional examples in Supplemental Figure 3; Supplemental Table 7). These proteins likely form building blocks of the SSU processome. The second class of proteins sedimented in only the fastest sedimenting fractions, which are the fractions in which the mature SSU processome sediments (examples in Fig 5B; additional examples in Supplemental Figure 3; Supplemental Table 7). The third class of proteins sedimented in all fractions of the glycerol gradient (examples in Supplemental Figure 3; Supplemental Table 7). These proteins did not form discrete subcomplexes, and were excluded from further analysis (Supplemental Table 7)."|figure legend:Figure S3, Figure 5B, Table S7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vXv6E9iWmq4OoPoF1JmK/LyE5G8559292 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rigid:cEhTt0m5q1ApnQcdQ5dwntYfzgw false flag tag:c-c tandem tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q05498 uniprotkb:Q99207 intact:EBI-30765|uniprotkb:D6VSX1|ensemblfungi:YDR339C intact:EBI-35157|uniprotkb:D6VRK0|ensemblfungi:YDL148C psi-mi:fcf1_yeast(display_long)|uniprotkb:FAF1-copurifying factor 1(gene name synonym)|uniprotkb:FCF1(gene name)|psi-mi:FCF1(display_short)|uniprotkb:D9651.9(orf name)|uniprotkb:YDR339C(locus name) psi-mi:nop14_yeast(display_long)|uniprotkb:NOP14(gene name)|psi-mi:NOP14(display_short)|uniprotkb:UTP2(gene name synonym)|uniprotkb:YDL148C(locus name)|uniprotkb:D1566(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 2(gene name synonym)|uniprotkb:U three protein 2(gene name synonym) psi-mi:"MI:0029"(cosedimentation through density gradient) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-16693371|imex:IM-25795-139 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010626.1|sgd:S000002747|reactome:R-SCE-6791226|dip:DIP-6627N|ensemblfungi:YDR339C(gene)|ensemblfungi:YDR339C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002716(PilT protein, N-terminal)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|interpro:IPR037503|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YDR339C(identity) refseq:NP_010133.1|sgd:S000002307|mint:Q99207|dip:DIP-4733N|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0030692"(Noc4p-Nop14p complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007276(Nop14-like protein)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YDL148C(gene)|ensemblfungi:YDL148C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|ensembl:YDL148C(identity) - crc64:0089AD246BA08473 crc64:F7615D96B02E15DE comment:"Glycerol gradient analysis of 42 of the 74 (57%) SPAFs revealed three main classes of sedimentation profiles visualized by western blotting of the tagged proteins. The first class of proteins sedimented in discrete peaks smaller than the SSU processome (examples and full list in Figure 5A; additional examples in Supplemental Figure 3; Supplemental Table 7). These proteins likely form building blocks of the SSU processome. The second class of proteins sedimented in only the fastest sedimenting fractions, which are the fractions in which the mature SSU processome sediments (examples in Fig 5B; additional examples in Supplemental Figure 3; Supplemental Table 7). The third class of proteins sedimented in all fractions of the glycerol gradient (examples in Supplemental Figure 3; Supplemental Table 7). These proteins did not form discrete subcomplexes, and were excluded from further analysis (Supplemental Table 7)."|figure legend:Figure S3, Figure 5B, Table S7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vXv6E9iWmq4OoPoF1JmK/LyE5G8559292 rogid:gI9SxINx8uFUHP91VaGXVXzjspQ559292 rigid:cEhTt0m5q1ApnQcdQ5dwntYfzgw false flag tag:c-c v5 tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q05498 uniprotkb:P47077 intact:EBI-30765|uniprotkb:D6VSX1|ensemblfungi:YDR339C intact:EBI-25778|uniprotkb:D6VWG7|ensemblfungi:YJL010C psi-mi:fcf1_yeast(display_long)|uniprotkb:FAF1-copurifying factor 1(gene name synonym)|uniprotkb:FCF1(gene name)|psi-mi:FCF1(display_short)|uniprotkb:D9651.9(orf name)|uniprotkb:YDR339C(locus name) psi-mi:nop9_yeast(display_long)|uniprotkb:YJL010C(locus name)|uniprotkb:J1357(orf name)|uniprotkb:NOP9(gene name)|psi-mi:NOP9(display_short)|uniprotkb:Pumilio domain-containing protein NOP9(gene name synonym) psi-mi:"MI:0029"(cosedimentation through density gradient) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-16693371|imex:IM-25795-139 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010626.1|sgd:S000002747|reactome:R-SCE-6791226|dip:DIP-6627N|ensemblfungi:YDR339C(gene)|ensemblfungi:YDR339C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002716(PilT protein, N-terminal)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|interpro:IPR037503|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YDR339C(identity) sgd:S000003547|refseq:NP_012524.3|mint:P47077|dip:DIP-5668N|ensemblfungi:YJL010C(gene)|ensemblfungi:YJL010C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR001313(Pumilio RNA-binding region)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040000|rcsb pdb:5SVD|rcsb pdb:5WTX|rcsb pdb:5WTY|rcsb pdb:6WPI|ensembl:YJL010C(identity) - crc64:0089AD246BA08473 - comment:"Glycerol gradient analysis of 42 of the 74 (57%) SPAFs revealed three main classes of sedimentation profiles visualized by western blotting of the tagged proteins. The first class of proteins sedimented in discrete peaks smaller than the SSU processome (examples and full list in Figure 5A; additional examples in Supplemental Figure 3; Supplemental Table 7). These proteins likely form building blocks of the SSU processome. The second class of proteins sedimented in only the fastest sedimenting fractions, which are the fractions in which the mature SSU processome sediments (examples in Fig 5B; additional examples in Supplemental Figure 3; Supplemental Table 7). The third class of proteins sedimented in all fractions of the glycerol gradient (examples in Supplemental Figure 3; Supplemental Table 7). These proteins did not form discrete subcomplexes, and were excluded from further analysis (Supplemental Table 7)."|figure legend:Figure S3, Figure 5B, Table S7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vXv6E9iWmq4OoPoF1JmK/LyE5G8559292 rogid:zlvVoDVv08jbqC1RJk7A/DhmIbE559292 rigid:cEhTt0m5q1ApnQcdQ5dwntYfzgw false flag tag:c-c flag tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q05498 uniprotkb:P36144 intact:EBI-30765|uniprotkb:D6VSX1|ensemblfungi:YDR339C intact:EBI-26459|uniprotkb:D6VXC1|ensemblfungi:YKR060W psi-mi:fcf1_yeast(display_long)|uniprotkb:FAF1-copurifying factor 1(gene name synonym)|uniprotkb:FCF1(gene name)|psi-mi:FCF1(display_short)|uniprotkb:D9651.9(orf name)|uniprotkb:YDR339C(locus name) psi-mi:rl1d1_yeast(display_long)|uniprotkb:YKR060W(locus name)|uniprotkb:UTP30(gene name)|psi-mi:UTP30(display_short)|uniprotkb:U3 snoRNP-associated protein UTP30(gene name synonym) psi-mi:"MI:0029"(cosedimentation through density gradient) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-16693371|imex:IM-25795-139 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010626.1|sgd:S000002747|reactome:R-SCE-6791226|dip:DIP-6627N|ensemblfungi:YDR339C(gene)|ensemblfungi:YDR339C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002716(PilT protein, N-terminal)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|interpro:IPR037503|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YDR339C(identity) refseq:NP_012986.1|sgd:S000001768|dip:DIP-1926N|ensemblfungi:YKR060W(gene)|ensemblfungi:YKR060W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR023674|interpro:IPR028364|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:5YDT|rcsb pdb:5YDU|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|ensembl:YKR060W(identity) - crc64:0089AD246BA08473 crc64:897F2B8C54CE8030 comment:"Glycerol gradient analysis of 42 of the 74 (57%) SPAFs revealed three main classes of sedimentation profiles visualized by western blotting of the tagged proteins. The first class of proteins sedimented in discrete peaks smaller than the SSU processome (examples and full list in Figure 5A; additional examples in Supplemental Figure 3; Supplemental Table 7). These proteins likely form building blocks of the SSU processome. The second class of proteins sedimented in only the fastest sedimenting fractions, which are the fractions in which the mature SSU processome sediments (examples in Fig 5B; additional examples in Supplemental Figure 3; Supplemental Table 7). The third class of proteins sedimented in all fractions of the glycerol gradient (examples in Supplemental Figure 3; Supplemental Table 7). These proteins did not form discrete subcomplexes, and were excluded from further analysis (Supplemental Table 7)."|figure legend:Figure S3, Figure 5B, Table S7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vXv6E9iWmq4OoPoF1JmK/LyE5G8559292 rogid:55z0clHNVhTle5uf71rBOLbjouo559292 rigid:cEhTt0m5q1ApnQcdQ5dwntYfzgw false flag tag:c-c tandem tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q05498 uniprotkb:P45818 intact:EBI-30765|uniprotkb:D6VSX1|ensemblfungi:YDR339C intact:EBI-15686|uniprotkb:D6VTY1|ensemblfungi:YGL171W psi-mi:fcf1_yeast(display_long)|uniprotkb:FAF1-copurifying factor 1(gene name synonym)|uniprotkb:FCF1(gene name)|psi-mi:FCF1(display_short)|uniprotkb:D9651.9(orf name)|uniprotkb:YDR339C(locus name) psi-mi:rok1_yeast(display_long)|uniprotkb:ROK1(gene name)|psi-mi:ROK1(display_short)|uniprotkb:YGL171W(locus name)|uniprotkb:G1651(orf name)|uniprotkb:Rescuer of KEM1 protein 1(gene name synonym) psi-mi:"MI:0029"(cosedimentation through density gradient) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-16693371|imex:IM-25795-139 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010626.1|sgd:S000002747|reactome:R-SCE-6791226|dip:DIP-6627N|ensemblfungi:YDR339C(gene)|ensemblfungi:YDR339C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002716(PilT protein, N-terminal)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|interpro:IPR037503|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YDR339C(identity) refseq:NP_011344.1|sgd:S000003139|ensemblfungi:YGL171W(gene)|ensemblfungi:YGL171W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0048254"(snoRNA localization)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR044764|reactome:R-SCE-6791226|dip:DIP-5111N|mint:P45818|ensembl:YGL171W(identity) - crc64:0089AD246BA08473 crc64:CACB950B8A15D5A2 comment:"Glycerol gradient analysis of 42 of the 74 (57%) SPAFs revealed three main classes of sedimentation profiles visualized by western blotting of the tagged proteins. The first class of proteins sedimented in discrete peaks smaller than the SSU processome (examples and full list in Figure 5A; additional examples in Supplemental Figure 3; Supplemental Table 7). These proteins likely form building blocks of the SSU processome. The second class of proteins sedimented in only the fastest sedimenting fractions, which are the fractions in which the mature SSU processome sediments (examples in Fig 5B; additional examples in Supplemental Figure 3; Supplemental Table 7). The third class of proteins sedimented in all fractions of the glycerol gradient (examples in Supplemental Figure 3; Supplemental Table 7). These proteins did not form discrete subcomplexes, and were excluded from further analysis (Supplemental Table 7)."|figure legend:Figure S3, Figure 5B, Table S7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vXv6E9iWmq4OoPoF1JmK/LyE5G8559292 rogid:Id8imuuTKPSw1r4qwGClHrYAxpQ559292 rigid:cEhTt0m5q1ApnQcdQ5dwntYfzgw false flag tag:c-c tandem tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q05498 uniprotkb:P25368 intact:EBI-30765|uniprotkb:D6VSX1|ensemblfungi:YDR339C intact:EBI-16019|uniprotkb:D6VQY4|ensemblfungi:YCL031C psi-mi:fcf1_yeast(display_long)|uniprotkb:FAF1-copurifying factor 1(gene name synonym)|uniprotkb:FCF1(gene name)|psi-mi:FCF1(display_short)|uniprotkb:D9651.9(orf name)|uniprotkb:YDR339C(locus name) psi-mi:rrp7_yeast(display_long)|uniprotkb:RRP7(gene name)|psi-mi:RRP7(display_short)|uniprotkb:YCL184(orf name)|uniprotkb:YCL31C(orf name)|uniprotkb:YCL031C(locus name) psi-mi:"MI:0029"(cosedimentation through density gradient) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-16693371|imex:IM-25795-139 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010626.1|sgd:S000002747|reactome:R-SCE-6791226|dip:DIP-6627N|ensemblfungi:YDR339C(gene)|ensemblfungi:YDR339C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002716(PilT protein, N-terminal)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|interpro:IPR037503|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YDR339C(identity) refseq:NP_009899.1|sgd:S000000536|interpro:IPR040446|interpro:IPR040447|rcsb pdb:2MBY|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensemblfungi:YCL031C(gene)|ensemblfungi:YCL031C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR024326|dip:DIP-4974N|mint:P25368|ensembl:YCL031C(identity) - crc64:0089AD246BA08473 crc64:768F43B0057788F2 comment:"Glycerol gradient analysis of 42 of the 74 (57%) SPAFs revealed three main classes of sedimentation profiles visualized by western blotting of the tagged proteins. The first class of proteins sedimented in discrete peaks smaller than the SSU processome (examples and full list in Figure 5A; additional examples in Supplemental Figure 3; Supplemental Table 7). These proteins likely form building blocks of the SSU processome. The second class of proteins sedimented in only the fastest sedimenting fractions, which are the fractions in which the mature SSU processome sediments (examples in Fig 5B; additional examples in Supplemental Figure 3; Supplemental Table 7). The third class of proteins sedimented in all fractions of the glycerol gradient (examples in Supplemental Figure 3; Supplemental Table 7). These proteins did not form discrete subcomplexes, and were excluded from further analysis (Supplemental Table 7)."|figure legend:Figure S3, Figure 5B, Table S7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vXv6E9iWmq4OoPoF1JmK/LyE5G8559292 rogid:fovz4jwoSdxp4Yh7KCDYpv3f0mc559292 rigid:cEhTt0m5q1ApnQcdQ5dwntYfzgw false flag tag:c-c - - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q05498 uniprotkb:Q12136 intact:EBI-30765|uniprotkb:D6VSX1|ensemblfungi:YDR339C intact:EBI-36084|uniprotkb:Q05842|uniprotkb:D6VRJ7|ensemblfungi:YDL153C psi-mi:fcf1_yeast(display_long)|uniprotkb:FAF1-copurifying factor 1(gene name synonym)|uniprotkb:FCF1(gene name)|psi-mi:FCF1(display_short)|uniprotkb:D9651.9(orf name)|uniprotkb:YDR339C(locus name) psi-mi:sas10_yeast(display_long)|uniprotkb:SAS10(gene name)|psi-mi:SAS10(display_short)|uniprotkb:UTP3(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 3(gene name synonym)|uniprotkb:U3 snoRNA-associated protein 11(gene name synonym)|uniprotkb:U three protein 3(gene name synonym)|uniprotkb:YDL153C(locus name)|uniprotkb:D1545(orf name) psi-mi:"MI:0029"(cosedimentation through density gradient) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-16693371|imex:IM-25795-139 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010626.1|sgd:S000002747|reactome:R-SCE-6791226|dip:DIP-6627N|ensemblfungi:YDR339C(gene)|ensemblfungi:YDR339C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002716(PilT protein, N-terminal)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|interpro:IPR037503|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YDR339C(identity) refseq:NP_010128.1|sgd:S000002312|mint:Q12136|dip:DIP-5047N|ensemblfungi:YDL153C(gene)|ensemblfungi:YDL153C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042802"(identical protein binding)|interpro:IPR007146(Small-subunit processome, Utp3)|interpro:IPR018972|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YDL153C(identity) - crc64:0089AD246BA08473 crc64:9278BF873834FC7E comment:"Glycerol gradient analysis of 42 of the 74 (57%) SPAFs revealed three main classes of sedimentation profiles visualized by western blotting of the tagged proteins. The first class of proteins sedimented in discrete peaks smaller than the SSU processome (examples and full list in Figure 5A; additional examples in Supplemental Figure 3; Supplemental Table 7). These proteins likely form building blocks of the SSU processome. The second class of proteins sedimented in only the fastest sedimenting fractions, which are the fractions in which the mature SSU processome sediments (examples in Fig 5B; additional examples in Supplemental Figure 3; Supplemental Table 7). The third class of proteins sedimented in all fractions of the glycerol gradient (examples in Supplemental Figure 3; Supplemental Table 7). These proteins did not form discrete subcomplexes, and were excluded from further analysis (Supplemental Table 7)."|figure legend:Figure S3, Figure 5B, Table S7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vXv6E9iWmq4OoPoF1JmK/LyE5G8559292 rogid:uLbOXAobeGAjMPFU6ZzBbK101wo559292 rigid:cEhTt0m5q1ApnQcdQ5dwntYfzgw false flag tag:c-c flag tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q05498 uniprotkb:P34247 intact:EBI-30765|uniprotkb:D6VSX1|ensemblfungi:YDR339C intact:EBI-20162|uniprotkb:D6VXI8|ensemblfungi:YKL099C psi-mi:fcf1_yeast(display_long)|uniprotkb:FAF1-copurifying factor 1(gene name synonym)|uniprotkb:FCF1(gene name)|psi-mi:FCF1(display_short)|uniprotkb:D9651.9(orf name)|uniprotkb:YDR339C(locus name) psi-mi:utp11_yeast(display_long)|uniprotkb:UTP11(gene name)|psi-mi:UTP11(display_short)|uniprotkb:YKL099C(locus name)|uniprotkb:YKL449(orf name)|uniprotkb:U three protein 11(gene name synonym) psi-mi:"MI:0029"(cosedimentation through density gradient) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-16693371|imex:IM-25795-139 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010626.1|sgd:S000002747|reactome:R-SCE-6791226|dip:DIP-6627N|ensemblfungi:YDR339C(gene)|ensemblfungi:YDR339C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002716(PilT protein, N-terminal)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|interpro:IPR037503|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YDR339C(identity) refseq:NP_012823.2|sgd:S000001582|reactome:R-SCE-6791226|ensemblfungi:YKL099C(gene)|ensemblfungi:YKL099C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0006364"(rRNA processing)|go:"GO:0006412"(translation)|go:"GO:0032040"(small-subunit processome)|interpro:IPR007144(Small-subunit processome, Utp11)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|dip:DIP-6569N|ensembl:YKL099C(identity) - crc64:0089AD246BA08473 crc64:AA013651708C4DB6 comment:"Glycerol gradient analysis of 42 of the 74 (57%) SPAFs revealed three main classes of sedimentation profiles visualized by western blotting of the tagged proteins. The first class of proteins sedimented in discrete peaks smaller than the SSU processome (examples and full list in Figure 5A; additional examples in Supplemental Figure 3; Supplemental Table 7). These proteins likely form building blocks of the SSU processome. The second class of proteins sedimented in only the fastest sedimenting fractions, which are the fractions in which the mature SSU processome sediments (examples in Fig 5B; additional examples in Supplemental Figure 3; Supplemental Table 7). The third class of proteins sedimented in all fractions of the glycerol gradient (examples in Supplemental Figure 3; Supplemental Table 7). These proteins did not form discrete subcomplexes, and were excluded from further analysis (Supplemental Table 7)."|figure legend:Figure S3, Figure 5B, Table S7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vXv6E9iWmq4OoPoF1JmK/LyE5G8559292 rogid:vMwGUuqsRuE9MZMert1+O6QTWak559292 rigid:cEhTt0m5q1ApnQcdQ5dwntYfzgw false flag tag:c-c tandem tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q05498 uniprotkb:P35194 intact:EBI-30765|uniprotkb:D6VSX1|ensemblfungi:YDR339C intact:EBI-1871|uniprotkb:D6VPZ8|ensemblfungi:YBL004W psi-mi:fcf1_yeast(display_long)|uniprotkb:FAF1-copurifying factor 1(gene name synonym)|uniprotkb:FCF1(gene name)|psi-mi:FCF1(display_short)|uniprotkb:D9651.9(orf name)|uniprotkb:YDR339C(locus name) psi-mi:utp20_yeast(display_long)|uniprotkb:YBL004W(locus name)|uniprotkb:YBL0101(orf name)|uniprotkb:UTP20(gene name)|psi-mi:UTP20(display_short)|uniprotkb:U three protein 20(gene name synonym) psi-mi:"MI:0029"(cosedimentation through density gradient) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-16693371|imex:IM-25795-139 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010626.1|sgd:S000002747|reactome:R-SCE-6791226|dip:DIP-6627N|ensemblfungi:YDR339C(gene)|ensemblfungi:YDR339C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002716(PilT protein, N-terminal)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|interpro:IPR037503|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YDR339C(identity) refseq:NP_009551.2|sgd:S000000100|dip:DIP-2826N|mint:P35194|ensemblfungi:YBL004W(gene)|ensemblfungi:YBL004W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|interpro:IPR011430(Down-regulated in metastasis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YBL004W(identity) - crc64:0089AD246BA08473 crc64:F6ED4E3E9AE0F468 comment:"Glycerol gradient analysis of 42 of the 74 (57%) SPAFs revealed three main classes of sedimentation profiles visualized by western blotting of the tagged proteins. The first class of proteins sedimented in discrete peaks smaller than the SSU processome (examples and full list in Figure 5A; additional examples in Supplemental Figure 3; Supplemental Table 7). These proteins likely form building blocks of the SSU processome. The second class of proteins sedimented in only the fastest sedimenting fractions, which are the fractions in which the mature SSU processome sediments (examples in Fig 5B; additional examples in Supplemental Figure 3; Supplemental Table 7). The third class of proteins sedimented in all fractions of the glycerol gradient (examples in Supplemental Figure 3; Supplemental Table 7). These proteins did not form discrete subcomplexes, and were excluded from further analysis (Supplemental Table 7)."|figure legend:Figure S3, Figure 5B, Table S7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vXv6E9iWmq4OoPoF1JmK/LyE5G8559292 rogid:jHfpz76nt2tQEEWYeM1PJlP4G8Q559292 rigid:cEhTt0m5q1ApnQcdQ5dwntYfzgw false flag tag:c-c v5 tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q05498 uniprotkb:P40055 intact:EBI-30765|uniprotkb:D6VSX1|ensemblfungi:YDR339C intact:EBI-22597|uniprotkb:D3DLY9|ensemblfungi:YER082C psi-mi:fcf1_yeast(display_long)|uniprotkb:FAF1-copurifying factor 1(gene name synonym)|uniprotkb:FCF1(gene name)|psi-mi:FCF1(display_short)|uniprotkb:D9651.9(orf name)|uniprotkb:YDR339C(locus name) psi-mi:utp7_yeast(display_long)|uniprotkb:UTP7(gene name)|psi-mi:UTP7(display_short)|uniprotkb:KRE31(gene name synonym)|uniprotkb:U three protein 7(gene name synonym)|uniprotkb:YER082C(locus name) psi-mi:"MI:0029"(cosedimentation through density gradient) Vincent et al. (2017) pubmed:29054886|imex:IM-25795|doi:10.1261/rna.062927.117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-16693371|imex:IM-25795-139 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010626.1|sgd:S000002747|reactome:R-SCE-6791226|dip:DIP-6627N|ensemblfungi:YDR339C(gene)|ensemblfungi:YDR339C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002716(PilT protein, N-terminal)|interpro:IPR006984(Protein of unknown function DUF652)|interpro:IPR029060|interpro:IPR037503|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|ensembl:YDR339C(identity) refseq:NP_011005.1|sgd:S000000884|dip:DIP-5398N|mint:P40055|ensemblfungi:YER082C(gene)|ensemblfungi:YER082C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|interpro:IPR001680(WD40 repeat)|interpro:IPR012952(BING4, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR036322|interpro:IPR040315|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|ensembl:YER082C(identity) - crc64:0089AD246BA08473 crc64:A254AD9AC1142AA5 comment:"Glycerol gradient analysis of 42 of the 74 (57%) SPAFs revealed three main classes of sedimentation profiles visualized by western blotting of the tagged proteins. The first class of proteins sedimented in discrete peaks smaller than the SSU processome (examples and full list in Figure 5A; additional examples in Supplemental Figure 3; Supplemental Table 7). These proteins likely form building blocks of the SSU processome. The second class of proteins sedimented in only the fastest sedimenting fractions, which are the fractions in which the mature SSU processome sediments (examples in Fig 5B; additional examples in Supplemental Figure 3; Supplemental Table 7). The third class of proteins sedimented in all fractions of the glycerol gradient (examples in Supplemental Figure 3; Supplemental Table 7). These proteins did not form discrete subcomplexes, and were excluded from further analysis (Supplemental Table 7)."|figure legend:Figure S3, Figure 5B, Table S7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/07/11 2017/12/11 rogid:vXv6E9iWmq4OoPoF1JmK/LyE5G8559292 rogid:2uFPq4stCHLw5niaXwAZ/7rXjdQ559292 rigid:cEhTt0m5q1ApnQcdQ5dwntYfzgw false flag tag:c-c tandem tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot)