#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P94077 uniprotkb:Q8RY25 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796369|ensemblplants:AT1G10390.1|ensemblplants:AT1G10390.2|ensemblplants:AT1G10390.3|uniprotkb:Q9SY83 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:nu98a_arath(display_long)|uniprotkb:NUP98A(gene name)|psi-mi:NUP98A(display_short)|uniprotkb:Nucleoporin 98A(gene name synonym)|uniprotkb:Nucleoporin autopeptidase(gene name synonym)|uniprotkb:F14N23.29(orf name)|uniprotkb:At1g10390(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) ensemblplants:AT1G10390(gene)|ensemblplants:AT1G10390.1(transcript)|ensemblplants:AT1G10390.2(transcript)|ensemblplants:AT1G10390.3(transcript)|go:"GO:0000973"(posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005737"(cytoplasm)|go:"GO:0006405"(RNA export from nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031965"(nuclear membrane)|go:"GO:0044614"(nuclear pore cytoplasmic filaments)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:1902446"(regulation of shade avoidance)|refseq:NP_001031018.1|refseq:NP_001320682.1|refseq:NP_172510.2|interpro:IPR037665|interpro:IPR007230(Peptidase S59, nucleoporin)|interpro:IPR036903 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:iLD8Hq07pk2+AiqJdr4uAwhL2cM3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9FM97 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-4466149|ensemblplants:AT5G56350.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:q9fm97_arath(display_long)|uniprotkb:At5g56350(locus name)|uniprotkb:At5g56350/MCD7.8(locus name)|uniprotkb:MCD7.8(gene name)|psi-mi:MCD7.8(display_short)|uniprotkb:MCD7_8(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) interpro:IPR015806(Pyruvate kinase, beta-barrel)|refseq:NP_200446.1|interpro:IPR001697(Pyruvate kinase)|interpro:IPR015813(Pyruvate/Phosphoenolpyruvate kinase, catalytic core)|interpro:IPR011037(Pyruvate kinase, beta-barrel-like)|interpro:IPR018209|interpro:IPR015793(Pyruvate kinase, barrel)|interpro:IPR015795(Pyruvate kinase, C-terminal-like)|interpro:IPR036918|interpro:IPR040442|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006096"(glycolytic process)|go:"GO:0009536"(plastid)|go:"GO:0016301"(kinase activity)|go:"GO:0030955"(potassium ion binding)|ensemblplants:AT5G56350(gene)|ensemblplants:AT5G56350.1(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004743"(pyruvate kinase activity) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:JMfIVMBgk8MLOUXupOZ1IlNnynU3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q42586 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796343|ensemblplants:AT3G54470.1|uniprotkb:Q9M1I0 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:umps_arath(display_long)|uniprotkb:PYRE-F(gene name)|psi-mi:PYRE-F(display_short)|uniprotkb:UMPS(gene name synonym)|uniprotkb:T14E10.40(orf name)|uniprotkb:At3g54470(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) ensemblplants:AT3G54470(gene)|ensemblplants:AT3G54470.1(transcript)|go:"GO:0004588"(orotate phosphoribosyltransferase activity)|go:"GO:0004590"(orotidine-5'-phosphate decarboxylase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006207"('de novo' pyrimidine nucleobase biosynthetic process)|go:"GO:0006222"(UMP biosynthetic process)|go:"GO:0009116"(nucleoside metabolic process)|go:"GO:0016036"(cellular response to phosphate starvation)|go:"GO:0019856"(pyrimidine nucleobase biosynthetic process)|go:"GO:0044205"('de novo' UMP biosynthetic process)|go:"GO:0046686"(response to cadmium ion)|refseq:NP_680130.1|interpro:IPR013785(Aldolase-type TIM barrel)|interpro:IPR014732(Orotidine 5'-phosphate decarboxylase, subfamily 1, core)|interpro:IPR018089|interpro:IPR001754(Orotidine 5'-phosphate decarboxylase, core)|interpro:IPR023031|interpro:IPR004467(Orotate phosphoribosyl transferase)|interpro:IPR000836(Phosphoribosyltransferase)|interpro:IPR029057|interpro:IPR011060(Ribulose-phosphate binding barrel) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:TCDQMzJXRD/qyT7aeypGpumNiuM3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:F4JVN6 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796315|ensemblplants:AT4G20850.1|uniprotkb:Q8L640|uniprotkb:Q9SUC7 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:tppii_arath(display_long)|uniprotkb:TPP2(gene name)|psi-mi:TPP2(display_short)|uniprotkb:Tripeptidyl-peptidase II(gene name synonym)|uniprotkb:T13K14.10(orf name)|uniprotkb:At4g20850(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) ensemblplants:AT4G20850(gene)|ensemblplants:AT4G20850.1(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004177"(aminopeptidase activity)|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005773"(vacuole)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006508"(proteolysis)|go:"GO:0008240"(tripeptidyl-peptidase activity)|go:"GO:0009507"(chloroplast)|go:"GO:0022626"(cytosolic ribosome)|refseq:NP_193817.2|interpro:IPR000209(Peptidase S8 and S53, subtilisin, kexin, sedolisin)|interpro:IPR036852|interpro:IPR022398|interpro:IPR023828|interpro:IPR015500(Peptidase S8, subtilisin-related)|interpro:IPR022229|interpro:IPR034051 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:35ath6x2ufCbh0Z/gDQW8f0G5J83702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q42522 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796292|ensemblplants:AT3G48730.1|uniprotkb:Q1JPM9|uniprotkb:Q9SMM6 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:gsa2_arath(display_long)|uniprotkb:FNE1(gene name synonym)|uniprotkb:GSA2(gene name)|psi-mi:GSA2(display_short)|uniprotkb:HEML2(gene name synonym)|uniprotkb:T8P19.240(orf name)|uniprotkb:At3g48730(locus name)|uniprotkb:Glutamate-1-semialdehyde aminotransferase 2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) ensemblplants:AT3G48730(gene)|ensemblplants:AT3G48730.1(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0006779"(porphyrin-containing compound biosynthetic process)|go:"GO:0006782"(protoporphyrinogen IX biosynthetic process)|go:"GO:0008483"(transaminase activity)|go:"GO:0009507"(chloroplast)|go:"GO:0009570"(chloroplast stroma)|go:"GO:0009941"(chloroplast envelope)|go:"GO:0015995"(chlorophyll biosynthetic process)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0042286"(glutamate-1-semialdehyde 2,1-aminomutase activity)|go:"GO:0042803"(protein homodimerization activity)|refseq:NP_190442.1|interpro:IPR004639(Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase)|interpro:IPR005814(Aminotransferase class-III)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR015422(Pyridoxal phosphate-dependent transferase, major region, subdomain 2)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:1dFVnanyIi3GZVr2AP/HWUiaTgA3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q39173 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796276|ensemblplants:AT5G16990.1|uniprotkb:Q9LFK3 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:p2_arath(display_long)|uniprotkb:P2(gene name)|psi-mi:P2(display_short)|uniprotkb:F2K13_140(orf name)|uniprotkb:At5g16990(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) interpro:IPR041694|ensemblplants:AT5G16990(gene)|ensemblplants:AT5G16990.1(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0009536"(plastid)|go:"GO:0032440"("2-alkenal reductase [NAD(P)+] activity")|refseq:NP_197201.1|interpro:IPR013149(Alcohol dehydrogenase, zinc-binding)|interpro:IPR011032(GroES-like)|interpro:IPR036291|interpro:IPR020843 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:GmH+q2tRkple9pmdh0Bur3F42bo3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:O23254 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-6589432|ensemblplants:AT4G13930.1|uniprotkb:Q8LBY1|uniprotkb:Q9FPJ3 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:glyc4_arath(display_long)|uniprotkb:SHM4(gene name)|psi-mi:SHM4(display_short)|uniprotkb:Glycine hydroxymethyltransferase 4(gene name synonym)|uniprotkb:SHMT4(gene name synonym)|uniprotkb:Serine methylase 4(gene name synonym)|uniprotkb:FCAALL.160(orf name)|uniprotkb:dl3005c(orf name)|uniprotkb:At4g13930(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) ensemblplants:AT4G13930(gene)|go:"GO:0006565"(L-serine catabolic process)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0007623"(circadian rhythm)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009506"(plasmodesma)|go:"GO:0019264"(glycine biosynthetic process from serine)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0046653"(tetrahydrofolate metabolic process)|go:"GO:0046655"(folic acid metabolic process)|ensemblplants:AT4G13930.1(transcript)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0050897"(cobalt ion binding)|go:"GO:0070905"(serine binding)|go:"GO:0004372"(glycine hydroxymethyltransferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015422(Pyridoxal phosphate-dependent transferase, major region, subdomain 2)|interpro:IPR001085(Glycine hydroxymethyltransferase)|interpro:IPR019798|refseq:NP_193129.1|interpro:IPR039429|rcsb pdb:6SMR - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:M+EtXiCQaiPQos8oiUtb8NojVWk3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9LK36 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796249|uniprotkb:Q8LPS8|uniprotkb:Q944K5|uniprotkb:Q949Z9|ensemblplants:AT3G23810.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:sahh2_arath(display_long)|uniprotkb:SAHH2(gene name)|psi-mi:SAHH2(display_short)|uniprotkb:S-adenosyl-L-homocysteine hydrolase 1(gene name synonym)|uniprotkb:SAH hydrolase 2(gene name synonym)|uniprotkb:MYM9.16(orf name)|uniprotkb:MYM9_15(orf name)|uniprotkb:At3g23810(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_189023.1|ensemblplants:AT3G23810(gene)|ensemblplants:AT3G23810.1(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004013"(adenosylhomocysteinase activity)|go:"GO:0005773"(vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0033353"(S-adenosylmethionine cycle)|interpro:IPR042172|interpro:IPR000043(S-adenosyl-L-homocysteine hydrolase)|interpro:IPR015878(S-adenosyl-L-homocysteine hydrolase, NAD binding)|interpro:IPR036291|interpro:IPR020082 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:dPkUKIhEjSbHBcwwKzsOPgj+GbA3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9SF85 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796219|uniprotkb:B3LFB3|ensemblplants:AT3G09820.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:adk1_arath(display_long)|uniprotkb:ADK1(gene name)|psi-mi:ADK1(display_short)|uniprotkb:Adenosine 5'-phosphotransferase 1(gene name synonym)|uniprotkb:F8A24.13(orf name)|uniprotkb:At3g09820(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) interpro:IPR001805(Adenosine kinase)|interpro:IPR002173(Carbohydrate/puine kinase, PfkB, conserved site)|interpro:IPR011611(Carbohydrate/purine kinase)|interpro:IPR029056|refseq:NP_187593.1|refseq:NP_974269.1|ensemblplants:AT3G09820(gene)|ensemblplants:AT3G09820.1(transcript)|go:"GO:0004001"(adenosine kinase activity)|go:"GO:0005507"(copper ion binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006169"(adenosine salvage)|go:"GO:0009506"(plasmodesma)|go:"GO:0044209"(AMP salvage)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0048046"(apoplast)|go:"GO:0080094"(response to trehalose-6-phosphate) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:jTjA6E2tCmA0vw/qICcfPUPEzCM3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9LIA8 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-2130957|uniprotkb:Q8L8N1|uniprotkb:Q944R8|ensemblplants:AT3G29360.1|ensemblplants:AT3G29360.2 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:ugdh2_arath(display_long)|uniprotkb:UGD2(gene name)|psi-mi:UGD2(display_short)|uniprotkb:At-UGD2(gene name synonym)|uniprotkb:UGD(gene name synonym)|uniprotkb:MUO10.18(orf name)|uniprotkb:MUO10_6(orf name)|uniprotkb:At3g29360(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) interpro:IPR028356|interpro:IPR036220|interpro:IPR036291|refseq:NP_001030792.1|refseq:NP_189582.1|interpro:IPR008927(6-phosphogluconate dehydrogenase, C-terminal-like)|interpro:IPR017476(Nucleotide sugar dehydrogenase)|interpro:IPR014027(UDP-glucose/GDP-mannose dehydrogenase, C-terminal)|interpro:IPR014026(UDP-glucose/GDP-mannose dehydrogenase, dimerisation)|interpro:IPR001732(UDP-glucose/GDP-mannose dehydrogenase, N-terminal)|ensemblplants:AT3G29360(gene)|ensemblplants:AT3G29360.1(transcript)|ensemblplants:AT3G29360.2(transcript)|go:"GO:0003979"(UDP-glucose 6-dehydrogenase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005975"(carbohydrate metabolic process)|go:"GO:0006024"(glycosaminoglycan biosynthetic process)|go:"GO:0006065"(UDP-glucuronate biosynthetic process)|go:"GO:0051287"(NAD binding)|go:"GO:0052546"(cell wall pectin metabolic process)|go:"GO:0099503"(secretory vesicle) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:UB7bSz+LbIW5xTy46Wt9nW/wxzc3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:P93033 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-2355288|uniprotkb:O24649|ensemblplants:AT2G47510.1|ensemblplants:AT2G47510.2|ensemblplants:AT2G47510.3 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:fum1_arath(display_long)|uniprotkb:FUM1(gene name)|psi-mi:FUM1(display_short)|uniprotkb:T30B22.19(orf name)|uniprotkb:At2g47510(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_001078075.1|refseq:NP_182273.1|interpro:IPR005677(Fumarate hydratase, class II)|interpro:IPR018951|interpro:IPR000362(Fumarate lyase)|interpro:IPR020557|interpro:IPR008948(L-Aspartase-like)|interpro:IPR024083|interpro:IPR022761|refseq:NP_001324328.1|ensemblplants:AT2G47510(gene)|ensemblplants:AT2G47510.1(transcript)|ensemblplants:AT2G47510.2(transcript)|ensemblplants:AT2G47510.3(transcript)|go:"GO:0004333"(fumarate hydratase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0006106"(fumarate metabolic process)|go:"GO:0006108"(malate metabolic process)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0045239"(tricarboxylic acid cycle enzyme complex)|go:"GO:0048868"(pollen tube development)|go:"GO:0051262"(protein tetramerization) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:UiIXvFrTDefPrP9Pm8ZLuDChhTA3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9SRZ6 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-449319|ensemblplants:AT1G65930.1|uniprotkb:Q8L9Z4|uniprotkb:Q8RWH2|uniprotkb:Q8RYD5 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:icdhc_arath(display_long)|uniprotkb:CICDH(gene name)|psi-mi:CICDH(display_short)|uniprotkb:F12P19.10(orf name)|uniprotkb:At1g65930(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) ensemblplants:AT1G65930(gene)|ensemblplants:AT1G65930.1(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004450"("isocitrate dehydrogenase (NADP+) activity")|go:"GO:0005507"(copper ion binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0006102"(isocitrate metabolic process)|go:"GO:0006739"(NADP metabolic process)|go:"GO:0009506"(plasmodesma)|go:"GO:0009570"(chloroplast stroma)|go:"GO:0010043"(response to zinc ion)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0048046"(apoplast)|go:"GO:0051287"(NAD binding)|refseq:NP_176768.1|interpro:IPR019818|interpro:IPR004790(Isocitrate dehydrogenase NADP-dependent, eukaryotic)|interpro:IPR024084 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:6GjllvVdUC2iAL/Lu9CMwB/Ja303702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:P42643 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-876602|uniprotkb:Q945M2|uniprotkb:Q9M0S7|ensemblplants:AT4G09000.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:14331_arath(display_long)|uniprotkb:General regulatory factor 1(gene name synonym)|uniprotkb:At4g09000(locus name)|uniprotkb:GRF1(gene name)|psi-mi:GRF1(display_short)|uniprotkb:F23J3.30(orf name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_567344.1|interpro:IPR000308(14-3-3 protein)|interpro:IPR023409|interpro:IPR023410|interpro:IPR036815|ensemblplants:AT4G09000(gene)|ensemblplants:AT4G09000.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019222"(regulation of metabolic process) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:Qjd2dg4YMRe7FxcCVI6OryQpefg3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9M1R2 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-2294777|ensemblplants:AT3G62120.1|ensemblplants:AT3G62120.2 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:sypc_arath(display_long)|uniprotkb:Prolyl-tRNA synthetase(gene name synonym)|uniprotkb:T17J13.80(orf name)|uniprotkb:At3g62120(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_191771.1|refseq:NP_850736.1|interpro:IPR002314("Aminoacyl-tRNA synthetase, class II (G, H, P and S)")|interpro:IPR006195(Aminoacyl-tRNA synthetase, class II)|interpro:IPR004154(Anticodon-binding)|interpro:IPR002316(Prolyl-tRNA synthetase, class IIa)|interpro:IPR004499(Prolyl-tRNA synthetase, class IIa, prokaryotic-type)|interpro:IPR017449(Prolyl-tRNA synthetase, class II)|interpro:IPR016061(Prolyl-tRNA synthetase, class II, C-terminal)|interpro:IPR033721|interpro:IPR036621|ensemblplants:AT3G62120(gene)|ensemblplants:AT3G62120.1(transcript)|ensemblplants:AT3G62120.2(transcript)|go:"GO:0004827"(proline-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006433"(prolyl-tRNA aminoacylation)|go:"GO:0009506"(plasmodesma)|go:"GO:0017101"(aminoacyl-tRNA synthetase multienzyme complex) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:2YGJrSUFLIPBgofIpvnwVp/Z9BM3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9SW96 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796194|uniprotkb:A4FVR0|ensemblplants:AT5G56680.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:sync1_arath(display_long)|uniprotkb:SYNC1(gene name)|psi-mi:SYNC1(display_short)|uniprotkb:EMB2755(gene name synonym)|uniprotkb:Asparaginyl-tRNA synthetase 1(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 2755(gene name synonym)|uniprotkb:MIK19.13(orf name)|uniprotkb:At5g56680(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_200479.1|interpro:IPR004364("Aminoacyl-tRNA synthetase, class II (D, K and N)")|interpro:IPR006195(Aminoacyl-tRNA synthetase, class II)|interpro:IPR004522(Asparaginyl-tRNA synthetase, class IIb)|interpro:IPR002312(Aspartyl-tRNA synthetase, class IIb)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR004365(Nucleic acid binding, OB-fold, tRNA/helicase-type)|interpro:IPR000738(WHEP-TRS)|ensemblplants:AT5G56680(gene)|ensemblplants:AT5G56680.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006421"(asparaginyl-tRNA aminoacylation)|go:"GO:0009507"(chloroplast)|go:"GO:0009536"(plastid)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0004816"(asparagine-tRNA ligase activity) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:5kZ+3WHjEYExSM54LPcQdloMBlA3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:O04630 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-1999248|uniprotkb:O81907|uniprotkb:Q84TG4|uniprotkb:Q94AG0|ensemblplants:AT5G26830.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:sytm1_arath(display_long)|uniprotkb:THRRS(gene name)|psi-mi:THRRS(display_short)|uniprotkb:Threonyl-tRNA synthetase(gene name synonym)|uniprotkb:F2P16.7(orf name)|uniprotkb:At5g26830(locus name)|uniprotkb:AtSYT1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795895|imex:IM-25758-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_198035.2|interpro:IPR002314("Aminoacyl-tRNA synthetase, class II (G, H, P and S)")|interpro:IPR006195(Aminoacyl-tRNA synthetase, class II)|interpro:IPR004154(Anticodon-binding)|interpro:IPR012675(Beta-grasp fold, ferredoxin-type)|interpro:IPR004095(TGS)|interpro:IPR012676(TGS-like)|interpro:IPR002320(Threonyl-tRNA synthetase, class IIa)|interpro:IPR018163|interpro:IPR012947(Threonyl/alanyl tRNA synthetase, SAD)|interpro:IPR033728|interpro:IPR036621|ensemblplants:AT5G26830(gene)|ensemblplants:AT5G26830.1(transcript)|go:"GO:0004829"(threonine-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006435"(threonyl-tRNA aminoacylation)|go:"GO:0009507"(chloroplast)|go:"GO:0009536"(plastid)|go:"GO:0046872"(metal ion binding) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:uGz0bgkJ18XnhTKNOTfiYXE1Uhk3702 rigid:I4CRFhobb0V47t7COVasPIFKRg4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9FM97 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-4466149|ensemblplants:AT5G56350.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:q9fm97_arath(display_long)|uniprotkb:At5g56350(locus name)|uniprotkb:At5g56350/MCD7.8(locus name)|uniprotkb:MCD7.8(gene name)|psi-mi:MCD7.8(display_short)|uniprotkb:MCD7_8(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) interpro:IPR015806(Pyruvate kinase, beta-barrel)|refseq:NP_200446.1|interpro:IPR001697(Pyruvate kinase)|interpro:IPR015813(Pyruvate/Phosphoenolpyruvate kinase, catalytic core)|interpro:IPR011037(Pyruvate kinase, beta-barrel-like)|interpro:IPR018209|interpro:IPR015793(Pyruvate kinase, barrel)|interpro:IPR015795(Pyruvate kinase, C-terminal-like)|interpro:IPR036918|interpro:IPR040442|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006096"(glycolytic process)|go:"GO:0009536"(plastid)|go:"GO:0016301"(kinase activity)|go:"GO:0030955"(potassium ion binding)|ensemblplants:AT5G56350(gene)|ensemblplants:AT5G56350.1(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004743"(pyruvate kinase activity) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:JMfIVMBgk8MLOUXupOZ1IlNnynU3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9SRT9 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-2925996|uniprotkb:O22427|ensemblplants:AT3G02230.1|uniprotkb:W8PVH6 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:rgp1_arath(display_long)|uniprotkb:F14P3.12(orf name)|uniprotkb:RGP1(gene name)|psi-mi:RGP1(display_short)|uniprotkb:Reversibly glycosylated polypeptide 1(gene name synonym)|uniprotkb:UDP-L-arabinose mutase 1(gene name synonym)|uniprotkb:At3g02230(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) ensemblplants:AT3G02230(gene)|ensemblplants:AT3G02230.1(transcript)|go:"GO:0000138"(Golgi trans cisterna)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005618"(cell wall)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0005829"(cytosol)|go:"GO:0009555"(pollen development)|go:"GO:0009832"(plant-type cell wall biogenesis)|go:"GO:0016760"("cellulose synthase (UDP-forming) activity")|go:"GO:0016866"(intramolecular transferase activity)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0033356"(UDP-L-arabinose metabolic process)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0052691"(UDP-arabinopyranose mutase activity)|go:"GO:0071555"(cell wall organization)|go:"GO:0071669"(plant-type cell wall organization or biogenesis)|refseq:NP_186872.1|interpro:IPR004901(Alpha-1,4-glucan-protein synthase, UDP-forming)|interpro:IPR029044|interpro:IPR037595 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:OKON5ld78ygKrICMLRczlAMDGig3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:O49482 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-1248137|uniprotkb:Q53ZN0|ensemblplants:AT4G34230.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:cadh5_arath(display_long)|uniprotkb:LCAD-D(gene name synonym)|uniprotkb:Cinnamyl alcohol dehydrogenase D(gene name synonym)|uniprotkb:At4g34230(locus name)|uniprotkb:F28A23.10(orf name)|uniprotkb:CAD-D(gene name synonym)|uniprotkb:CAD6(gene name synonym)|uniprotkb:CAD5(gene name)|psi-mi:CAD5(display_short) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_195149.1|interpro:IPR013149(Alcohol dehydrogenase, zinc-binding)|interpro:IPR013154(Alcohol dehydrogenase GroES-like)|interpro:IPR002328(Alcohol dehydrogenase, zinc-containing, conserved site)|interpro:IPR011032(GroES-like)|rcsb pdb:2CF5|rcsb pdb:2CF6|interpro:IPR020843|interpro:IPR036291|ensemblplants:AT4G34230(gene)|ensemblplants:AT4G34230.1(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009809"(lignin biosynthetic process)|go:"GO:0016616"(oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor)|go:"GO:0045551"(cinnamyl-alcohol dehydrogenase activity)|go:"GO:0052747"(sinapyl alcohol dehydrogenase activity) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:3KicNPM1ZJ5ShpdV2JOraHFsXKQ3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q94JW0 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796153|uniprotkb:Q9M2J8|ensemblplants:AT3G58180.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:dohh_arath(display_long)|uniprotkb:Deoxyhypusine dioxygenase(gene name synonym)|uniprotkb:Deoxyhypusine monooxygenase(gene name synonym)|uniprotkb:F9D24.90(orf name)|uniprotkb:At3g58180(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_567062.1|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR027517|interpro:IPR004155(PBS lyase HEAT-like repeat)|ensemblplants:AT3G58180(gene)|ensemblplants:AT3G58180.1(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008612"(peptidyl-lysine modification to peptidyl-hypusine)|go:"GO:0016491"(oxidoreductase activity)|go:"GO:0019135"(deoxyhypusine monooxygenase activity)|go:"GO:0046872"(metal ion binding) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:sQMCjZS8yeHnYxb+C3KMOIoEMvg3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:P24100 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-371713|uniprotkb:Q29Q50|uniprotkb:Q8RX68|uniprotkb:Q9M307|ensemblplants:AT3G48750.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:cdka1_arath(display_long)|uniprotkb:CDKA-1(gene name)|psi-mi:CDKA-1(display_short)|uniprotkb:Cell division control protein 2 homolog A(gene name synonym)|uniprotkb:CDC2(gene name synonym)|uniprotkb:At3g48750(locus name)|uniprotkb:CDC2A(gene name synonym)|uniprotkb:T21J18.20(orf name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_566911.1|interpro:IPR011009(Protein kinase-like)|interpro:IPR000719(Protein kinase, core)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|ensemblplants:AT3G48750(gene)|ensemblplants:AT3G48750.1(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000307"(cyclin-dependent protein kinase holoenzyme complex)|go:"GO:0000911"(cytokinesis by cell plate formation)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004693"(cyclin-dependent protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009409"(response to cold)|go:"GO:0009555"(pollen development)|go:"GO:0009574"(preprophase band)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0010005"(cortical microtubule, transverse to long axis)|go:"GO:0010235"(guard mother cell cytokinesis)|go:"GO:0010389"(regulation of G2/M transition of mitotic cell cycle)|go:"GO:0010444"(guard mother cell differentiation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0016301"(kinase activity)|go:"GO:0030332"(cyclin binding)|go:"GO:0033206"(meiotic cytokinesis)|go:"GO:0040020"(regulation of meiotic nuclear division)|go:"GO:0042023"(DNA endoreduplication)|go:"GO:0048229"(gametophyte development)|go:"GO:0051445"(regulation of meiotic cell cycle)|go:"GO:0098725"(symmetric cell division)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1902806"(regulation of cell cycle G1/S phase transition)|go:"GO:0008353"(RNA polymerase II CTD heptapeptide repeat kinase activity) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:1T1gIp21T5rt408IqjMzU6RF1gA3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9LZQ9 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-4429316|ensemblplants:AT3G62310.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:deah2_arath(display_long)|uniprotkb:DEAH RNA helicase homolog PRP43(gene name synonym)|uniprotkb:T12C14_10(orf name)|uniprotkb:At3g62310(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_191790.1|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR007502(Helicase-associated region)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR027417|ensemblplants:AT3G62310(gene)|ensemblplants:AT3G62310.1(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR044756 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:QIJzSu/rE0FPznjQwSvaUvVF0QU3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q94CK1 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796144|ensemblplants:AT5G12410.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:q94ck1_arath(display_long)|uniprotkb:At5g12410(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_568274.1|interpro:IPR004114(THUMP)|ensemblplants:AT5G12410(gene)|ensemblplants:AT5G12410.1(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006400"(tRNA modification)|interpro:IPR040183 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:Yp8tFjXtKG+aU2WWdVvrZ2qCO7o3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9LPT6 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796120|uniprotkb:A0A178W4L6|ensemblplants:AT1G50670.1|ensemblplants:AT1G50670.2|ensemblplants:AT1G50670.3 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:otu2_arath(display_long)|uniprotkb:OTU2(gene name)|psi-mi:OTU2(display_short)|uniprotkb:Deubiquitinating enzyme OTU2(gene name synonym)|uniprotkb:F17J6.19(orf name)|uniprotkb:At1g50670(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_001321194.1|refseq:NP_001321195.1|refseq:NP_175482.1|interpro:IPR039138|interpro:IPR003323(Ovarian tumour, otubain)|interpro:IPR038765|ensemblplants:AT1G50670(gene)|ensemblplants:AT1G50670.1(transcript)|ensemblplants:AT1G50670.2(transcript)|ensemblplants:AT1G50670.3(transcript)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:3TzpjKcPmjLmJ12eWBCuYOKntA43702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:P92974 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796092|ensemblplants:AT5G06460.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:ube12_arath(display_long)|uniprotkb:UBA2(gene name)|psi-mi:UBA2(display_short)|uniprotkb:MHF15.2(orf name)|uniprotkb:At5g06460(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) interpro:IPR042063|refseq:NP_568168.1|interpro:IPR032420|interpro:IPR032418|interpro:IPR000594(UBA/THIF-type NAD/FAD binding fold)|interpro:IPR018965|interpro:IPR038252|interpro:IPR019572|interpro:IPR035985|interpro:IPR018075|interpro:IPR018074|interpro:IPR033127|interpro:IPR000011(Ubiquitin-activating enzyme, E1)|ensemblplants:AT5G06460(gene)|ensemblplants:AT5G06460.1(transcript)|go:"GO:0004839"(ubiquitin activating enzyme activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0032446"(protein modification by small protein conjugation)|interpro:IPR042449|interpro:IPR042302 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:7PDWKpi01M3mMtbVXbSW65avQKE3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q8LFT2 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-2265511|uniprotkb:Q8LPH8|uniprotkb:Q8S8A4|uniprotkb:Q8S943|uniprotkb:Q9SI47|ensemblplants:AT2G14120.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:drp3b_arath(display_long)|uniprotkb:DRP3B(gene name)|psi-mi:DRP3B(display_short)|uniprotkb:ADL2B(gene name synonym)|uniprotkb:Dynamin-like protein 2b(gene name synonym)|uniprotkb:T22C12.1(orf name)|uniprotkb:At2g14120(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) interpro:IPR030381|refseq:NP_565362.1|interpro:IPR022812|interpro:IPR000375(Dynamin central region)|interpro:IPR001401(Dynamin, GTPase region)|interpro:IPR019762|interpro:IPR003130(Dynamin GTPase effector)|interpro:IPR020850|interpro:IPR027417|ensemblplants:AT2G14120(gene)|ensemblplants:AT2G14120.1(transcript)|go:"GO:0000266"(mitochondrial fission)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005777"(peroxisome)|go:"GO:0007031"(peroxisome organization)|go:"GO:0007049"(cell cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0016020"(membrane)|go:"GO:0051301"(cell division) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:KAmZ5h9ZPc2CmNC3+4c+/6Y9C4w3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q8S944 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-2265428|uniprotkb:O22403|uniprotkb:O81882|uniprotkb:Q94CF3|ensemblplants:AT4G33650.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:drp3a_arath(display_long)|uniprotkb:DRP3A(gene name)|psi-mi:DRP3A(display_short)|uniprotkb:ADL2(gene name synonym)|uniprotkb:ADL2A(gene name synonym)|uniprotkb:Dynamin-like protein 2a(gene name synonym)|uniprotkb:Dynamin-like protein 2(gene name synonym)|uniprotkb:T16L1.140(orf name)|uniprotkb:At4g33650(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_567931.1|dip:DIP-47338N|ensemblplants:AT4G33650(gene)|ensemblplants:AT4G33650.1(transcript)|go:"GO:0000266"(mitochondrial fission)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005777"(peroxisome)|go:"GO:0007031"(peroxisome organization)|go:"GO:0007049"(cell cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0051301"(cell division)|interpro:IPR000375(Dynamin central region)|interpro:IPR001401(Dynamin, GTPase region)|interpro:IPR003130(Dynamin GTPase effector)|interpro:IPR019762|interpro:IPR020850|interpro:IPR022812|interpro:IPR027417|interpro:IPR030381 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:DGFib0QGXYSARwzfaQD5PCOwgX03702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q949X7 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796073|uniprotkb:Q9LUL0|ensemblplants:AT3G14390.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:dcda1_arath(display_long)|uniprotkb:LYSA1(gene name)|psi-mi:LYSA1(display_short)|uniprotkb:MLN21.17(orf name)|uniprotkb:At3g14390(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) interpro:IPR009006(Alanine racemase/group IV decarboxylase, C-terminal)|interpro:IPR002986(Diaminopimelate decarboxylase)|interpro:IPR022643|interpro:IPR022657|interpro:IPR022644|interpro:IPR022653|interpro:IPR000183(Orn/DAP/Arg decarboxylase 2)|interpro:IPR029066|refseq:NP_188056.1|ensemblplants:AT3G14390(gene)|ensemblplants:AT3G14390.1(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008836"(diaminopimelate decarboxylase activity)|go:"GO:0009089"(lysine biosynthetic process via diaminopimelate)|go:"GO:0009507"(chloroplast)|go:"GO:0009570"(chloroplast stroma)|rcsb pdb:6N2A - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:uc0qVJe9p8a89+jMl+AJnxToJR03702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9LFG2 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796057|ensemblplants:AT3G53580.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:dapf_arath(display_long)|uniprotkb:DAPF(gene name)|psi-mi:DAPF(display_short)|uniprotkb:F4P12.280(orf name)|uniprotkb:At3g53580(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_190926.1|rcsb pdb:3EJX|rcsb pdb:3EKM|interpro:IPR018510|interpro:IPR001653(Diaminopimelate epimerase)|ensemblplants:AT3G53580(gene)|ensemblplants:AT3G53580.1(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008837"(diaminopimelate epimerase activity)|go:"GO:0009089"(lysine biosynthetic process via diaminopimelate)|go:"GO:0009507"(chloroplast)|go:"GO:0009570"(chloroplast stroma) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:nd7BGNvA9CPJkMg3m13DnAJf72o3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:O80585 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-3386861|ensemblplants:AT2G44160.1|uniprotkb:Q56ZL2|uniprotkb:Q94JZ1|uniprotkb:Q9SE59|uniprotkb:Q9SUJ0 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:mthr2_arath(display_long)|uniprotkb:MTHFR2(gene name)|psi-mi:MTHFR2(display_short)|uniprotkb:F6E13.29(orf name)|uniprotkb:At2g44160(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_566011.1|interpro:IPR004621(Eukaryotic-type methylenetetrahydrofolate reductase)|interpro:IPR003171(Methylenetetrahydrofolate reductase)|ensemblplants:AT2G44160(gene)|ensemblplants:AT2G44160.1(transcript)|go:"GO:0004489"("methylenetetrahydrofolate reductase (NAD(P)H) activity")|go:"GO:0005829"(cytosol)|go:"GO:0009086"(methionine biosynthetic process)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0071949"(FAD binding)|go:"GO:0106312"(methylenetetrahydrofolate reductase NADH activity)|go:"GO:0106313"(methylenetetrahydrofolate reductase NADPH activity)|interpro:IPR029041 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:iHR3JrwmubsfeBVyRiDaiP4o5Tc3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9SE60 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796038|ensemblplants:AT3G59970.3|uniprotkb:Q3EAG9 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:mthr1_arath(display_long)|uniprotkb:MTHFR1(gene name)|psi-mi:MTHFR1(display_short)|uniprotkb:F24G16.240(orf name)|uniprotkb:At3g59970(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_850723.1|interpro:IPR029041|interpro:IPR004621(Eukaryotic-type methylenetetrahydrofolate reductase)|interpro:IPR003171(Methylenetetrahydrofolate reductase)|interpro:IPR004620(5,10-methylenetetrahydrofolate reductase)|ensemblplants:AT3G59970(gene)|ensemblplants:AT3G59970.3(transcript)|go:"GO:0004489"("methylenetetrahydrofolate reductase (NAD(P)H) activity")|go:"GO:0005829"(cytosol)|go:"GO:0009086"(methionine biosynthetic process)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0071949"(FAD binding)|go:"GO:0106312"(methylenetetrahydrofolate reductase NADH activity)|go:"GO:0106313"(methylenetetrahydrofolate reductase NADPH activity)|refseq:NP_191556.1 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:pehvXFehkBhGbKhp5qBjOtK5uu43702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:P05466 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20796018|ensemblplants:AT2G45300.1|ensemblplants:AT2G45300.2|ensemblplants:AT2G45300.4|uniprotkb:O22142|uniprotkb:Q501E1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:aroa_arath(display_long)|uniprotkb:5-enolpyruvylshikimate-3-phosphate synthase(gene name synonym)|uniprotkb:F4L23.19(orf name)|uniprotkb:At2g45300(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) ensemblplants:AT2G45300(gene)|ensemblplants:AT2G45300.1(transcript)|ensemblplants:AT2G45300.2(transcript)|ensemblplants:AT2G45300.4(transcript)|go:"GO:0003866"(3-phosphoshikimate 1-carboxyvinyltransferase activity)|go:"GO:0008652"(cellular amino acid biosynthetic process)|go:"GO:0009073"(aromatic amino acid family biosynthetic process)|go:"GO:0009423"(chorismate biosynthetic process)|go:"GO:0009507"(chloroplast)|go:"GO:0009570"(chloroplast stroma)|refseq:NP_001318428.1|refseq:NP_001324852.1|refseq:NP_182055.1|interpro:IPR001986(3-phosphoshikimate 1-carboxyvinyltransferase, core)|interpro:IPR036968|interpro:IPR006264(3-phosphoshikimate 1-carboxyvinyltransferase, subgroup)|interpro:IPR023193|interpro:IPR013792(RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:JRvnKHUasJpjMtjwlrycbqbXwws3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9LMI0 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20795997|ensemblplants:AT1G06410.1|ensemblplants:AT1G06410.2|ensemblplants:AT1G06410.3|uniprotkb:Q0WPW3 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:tps7_arath(display_long)|uniprotkb:TPS7(gene name)|psi-mi:TPS7(display_short)|uniprotkb:TPSA(gene name synonym)|uniprotkb:Trehalose-6-phosphate synthase 7(gene name synonym)|uniprotkb:T2D23.11(orf name)|uniprotkb:At1g06410(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) ensemblplants:AT1G06410(gene)|ensemblplants:AT1G06410.1(transcript)|ensemblplants:AT1G06410.2(transcript)|ensemblplants:AT1G06410.3(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0016311"(dephosphorylation)|go:"GO:0016757"(glycosyltransferase activity)|refseq:NP_001321475.1|refseq:NP_001321476.1|refseq:NP_172129.1|interpro:IPR001830(Glycosyl transferase, family 20)|interpro:IPR036412|interpro:IPR006379(HAD-superfamily hydrolase, subfamily IIB)|interpro:IPR023214|interpro:IPR003337(Trehalose-phosphatase) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:ua6K7nztghUZQoyjA0IG6u5Z3Ik3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q8W4M5 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20795974|ensemblplants:AT1G12000.1|uniprotkb:O65379 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:pfpb1_arath(display_long)|uniprotkb:PFP-BETA1(gene name)|psi-mi:PFP-BETA1(display_short)|uniprotkb:6-phosphofructokinase, pyrophosphate dependent 1(gene name synonym)|uniprotkb:PPi-PFK 1(gene name synonym)|uniprotkb:Pyrophosphate-dependent 6-phosphofructose-1-kinase 1(gene name synonym)|uniprotkb:F12F1.13(orf name)|uniprotkb:At1g12000(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) ensemblplants:AT1G12000(gene)|ensemblplants:AT1G12000.1(transcript)|go:"GO:0003872"(6-phosphofructokinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005829"(cytosol)|go:"GO:0006002"(fructose 6-phosphate metabolic process)|go:"GO:0008443"(phosphofructokinase activity)|go:"GO:0009749"(response to glucose)|go:"GO:0015979"(photosynthesis)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0046872"(metal ion binding)|go:"GO:0047334"(diphosphate-fructose-6-phosphate 1-phosphotransferase activity)|refseq:NP_172664.1|interpro:IPR022953|interpro:IPR011183(Pyrophosphate-dependent phosphofructokinase PfpB)|interpro:IPR000023(Phosphofructokinase)|interpro:IPR035966 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:3cbNlSvHgwP/8P17KWVJekl0o6w3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9FFR3 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-2299038|uniprotkb:Q8LG34|ensemblplants:AT5G41670.1|ensemblplants:AT5G41670.2|ensemblplants:AT5G41670.3|ensemblplants:AT5G41670.4 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:6pgd3_arath(display_long)|uniprotkb:PGD3(gene name)|psi-mi:PGD3(display_short)|uniprotkb:MBK23.20(orf name)|uniprotkb:At5g41670(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_198982.1|refseq:NP_851113.1|interpro:IPR008927(6-phosphogluconate dehydrogenase, C-terminal-like)|interpro:IPR006114(6-phosphogluconate dehydrogenase, C-terminal)|interpro:IPR006113(6-phosphogluconate dehydrogenase, decarboxylating)|interpro:IPR006115(6-phosphogluconate dehydrogenase, NAD-binding)|interpro:IPR013328(Dehydrogenase, multihelical)|interpro:IPR006183(6-phosphogluconate dehydrogenase)|refseq:NP_001318724.1|refseq:NP_001332670.1|interpro:IPR036291|ensemblplants:AT5G41670(gene)|ensemblplants:AT5G41670.1(transcript)|ensemblplants:AT5G41670.2(transcript)|ensemblplants:AT5G41670.3(transcript)|ensemblplants:AT5G41670.4(transcript)|go:"GO:0004616"("phosphogluconate dehydrogenase (decarboxylating) activity")|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0008114"(phosphogluconate 2-dehydrogenase activity)|go:"GO:0009051"(pentose-phosphate shunt, oxidative branch)|go:"GO:0009506"(plasmodesma)|go:"GO:0009507"(chloroplast)|go:"GO:0009536"(plastid)|go:"GO:0009570"(chloroplast stroma)|go:"GO:0009744"(response to sucrose)|go:"GO:0009749"(response to glucose)|go:"GO:0009750"(response to fructose)|go:"GO:0046177"(D-gluconate catabolic process)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0050661"(NADP binding)|go:"GO:0099503"(secretory vesicle) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:8QwKCNtMzMJLIsY3n7NiY1UheAg3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9SH69 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-9348443|ensemblplants:AT1G64190.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:6pgd1_arath(display_long)|uniprotkb:PGD1(gene name)|psi-mi:PGD1(display_short)|uniprotkb:F22C12.5(orf name)|uniprotkb:At1g64190(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) interpro:IPR006183(6-phosphogluconate dehydrogenase)|refseq:NP_176601.1|interpro:IPR008927(6-phosphogluconate dehydrogenase, C-terminal-like)|interpro:IPR006114(6-phosphogluconate dehydrogenase, C-terminal)|interpro:IPR006113(6-phosphogluconate dehydrogenase, decarboxylating)|interpro:IPR006115(6-phosphogluconate dehydrogenase, NAD-binding)|interpro:IPR013328(Dehydrogenase, multihelical)|interpro:IPR036291|ensemblplants:AT1G64190(gene)|ensemblplants:AT1G64190.1(transcript)|go:"GO:0004616"("phosphogluconate dehydrogenase (decarboxylating) activity")|go:"GO:0005829"(cytosol)|go:"GO:0008114"(phosphogluconate 2-dehydrogenase activity)|go:"GO:0009051"(pentose-phosphate shunt, oxidative branch)|go:"GO:0009507"(chloroplast)|go:"GO:0009536"(plastid)|go:"GO:0009570"(chloroplast stroma)|go:"GO:0046177"(D-gluconate catabolic process)|go:"GO:0050661"(NADP binding)|go:"GO:0099503"(secretory vesicle) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:CTRyaBgF2YjhZMOLUzy/SDN4bto3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9LIA8 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-2130957|uniprotkb:Q8L8N1|uniprotkb:Q944R8|ensemblplants:AT3G29360.1|ensemblplants:AT3G29360.2 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:ugdh2_arath(display_long)|uniprotkb:UGD2(gene name)|psi-mi:UGD2(display_short)|uniprotkb:At-UGD2(gene name synonym)|uniprotkb:UGD(gene name synonym)|uniprotkb:MUO10.18(orf name)|uniprotkb:MUO10_6(orf name)|uniprotkb:At3g29360(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) interpro:IPR028356|interpro:IPR036220|interpro:IPR036291|refseq:NP_001030792.1|refseq:NP_189582.1|interpro:IPR008927(6-phosphogluconate dehydrogenase, C-terminal-like)|interpro:IPR017476(Nucleotide sugar dehydrogenase)|interpro:IPR014027(UDP-glucose/GDP-mannose dehydrogenase, C-terminal)|interpro:IPR014026(UDP-glucose/GDP-mannose dehydrogenase, dimerisation)|interpro:IPR001732(UDP-glucose/GDP-mannose dehydrogenase, N-terminal)|ensemblplants:AT3G29360(gene)|ensemblplants:AT3G29360.1(transcript)|ensemblplants:AT3G29360.2(transcript)|go:"GO:0003979"(UDP-glucose 6-dehydrogenase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005975"(carbohydrate metabolic process)|go:"GO:0006024"(glycosaminoglycan biosynthetic process)|go:"GO:0006065"(UDP-glucuronate biosynthetic process)|go:"GO:0051287"(NAD binding)|go:"GO:0052546"(cell wall pectin metabolic process)|go:"GO:0099503"(secretory vesicle) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:UB7bSz+LbIW5xTy46Wt9nW/wxzc3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:F4JLM5 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20795947|ensemblplants:AT4G10320.1|uniprotkb:O82613|uniprotkb:Q9SV89 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:syic_arath(display_long)|uniprotkb:Isoleucyl-tRNA synthetase(gene name synonym)|uniprotkb:F24G24.120(orf name)|uniprotkb:T9A4.4(orf name)|uniprotkb:At4g10320(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) ensemblplants:AT4G10320(gene)|ensemblplants:AT4G10320.1(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0002161"(aminoacyl-tRNA editing activity)|go:"GO:0004822"(isoleucine-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0006428"(isoleucyl-tRNA aminoacylation)|go:"GO:0046686"(response to cadmium ion)|refseq:NP_192770.2|interpro:IPR001412(Aminoacyl-tRNA synthetase, class I, conserved site)|interpro:IPR002300(Aminoacyl-tRNA synthetase, class Ia)|interpro:IPR033709|interpro:IPR002301(Isoleucyl-tRNA synthetase, class Ia)|interpro:IPR023586|interpro:IPR013155(Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR009080(Aminoacyl-tRNA synthetase, class 1a, anticodon-binding)|interpro:IPR009008(Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:MAQWgdTsCJc08TwBIGLfRbMAPYg3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:F4I116 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20795925|ensemblplants:AT1G09620.1|uniprotkb:Q56WB9 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:sylc_arath(display_long)|uniprotkb:Leucyl-tRNA synthetase(gene name synonym)|uniprotkb:At1g09620(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) ensemblplants:AT1G09620(gene)|ensemblplants:AT1G09620.1(transcript)|go:"GO:0002161"(aminoacyl-tRNA editing activity)|go:"GO:0004823"(leucine-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0006429"(leucyl-tRNA aminoacylation)|go:"GO:0009506"(plasmodesma)|go:"GO:0009507"(chloroplast)|refseq:NP_172433.2|interpro:IPR001412(Aminoacyl-tRNA synthetase, class I, conserved site)|interpro:IPR002300(Aminoacyl-tRNA synthetase, class Ia)|interpro:IPR004493(Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic)|interpro:IPR013155(Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding)|interpro:IPR009080(Aminoacyl-tRNA synthetase, class 1a, anticodon-binding)|interpro:IPR009008(Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:kD7xW6e5yp5HT/ztaSfH21LkUeM3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:Q9ZPI1 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-20795905|ensemblplants:AT3G11710.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:sykc_arath(display_long)|uniprotkb:Lysyl-tRNA synthetase(gene name synonym)|uniprotkb:Lysyl-tRNA synthetase 1(gene name synonym)|uniprotkb:T19F11.11(orf name)|uniprotkb:At3g11710(locus name) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) ensemblplants:AT3G11710(gene)|ensemblplants:AT3G11710.1(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004824"(lysine-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0006430"(lysyl-tRNA aminoacylation)|go:"GO:0009506"(plasmodesma)|go:"GO:0046872"(metal ion binding)|refseq:NP_187777.1|interpro:IPR004364("Aminoacyl-tRNA synthetase, class II (D, K and N)")|interpro:IPR006195(Aminoacyl-tRNA synthetase, class II)|interpro:IPR002313(Lysyl-tRNA synthetase, class II)|interpro:IPR034762|interpro:IPR018149|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR004365(Nucleic acid binding, OB-fold, tRNA/helicase-type)|interpro:IPR044136 - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:yyhnQ7pPxSSEdoWBofbgGNK6REc3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P94077 uniprotkb:O04630 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-1999248|uniprotkb:O81907|uniprotkb:Q84TG4|uniprotkb:Q94AG0|ensemblplants:AT5G26830.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:sytm1_arath(display_long)|uniprotkb:THRRS(gene name)|psi-mi:THRRS(display_short)|uniprotkb:Threonyl-tRNA synthetase(gene name synonym)|uniprotkb:F2P16.7(orf name)|uniprotkb:At5g26830(locus name)|uniprotkb:AtSYT1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-20795900|imex:IM-25758-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_198035.2|interpro:IPR002314("Aminoacyl-tRNA synthetase, class II (G, H, P and S)")|interpro:IPR006195(Aminoacyl-tRNA synthetase, class II)|interpro:IPR004154(Anticodon-binding)|interpro:IPR012675(Beta-grasp fold, ferredoxin-type)|interpro:IPR004095(TGS)|interpro:IPR012676(TGS-like)|interpro:IPR002320(Threonyl-tRNA synthetase, class IIa)|interpro:IPR018163|interpro:IPR012947(Threonyl/alanyl tRNA synthetase, SAD)|interpro:IPR033728|interpro:IPR036621|ensemblplants:AT5G26830(gene)|ensemblplants:AT5G26830.1(transcript)|go:"GO:0004829"(threonine-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006435"(threonyl-tRNA aminoacylation)|go:"GO:0009507"(chloroplast)|go:"GO:0009536"(plastid)|go:"GO:0046872"(metal ion binding) - - - figure legend:Table1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/10/15 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:uGz0bgkJ18XnhTKNOTfiYXE1Uhk3702 rigid:1QBiklIyY6anS5IzcPQxAZRRX/4 false tandem tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9SU72 uniprotkb:Q9SU72 intact:EBI-1390454|uniprotkb:B9DFM5|ensemblplants:AT3G48090.1 intact:EBI-1390454|uniprotkb:B9DFM5|ensemblplants:AT3G48090.1 psi-mi:eds1c_arath(display_long)|uniprotkb:EDS1(gene name)|psi-mi:EDS1(display_short)|uniprotkb:EDS1-90(gene name synonym)|uniprotkb:EDS1A(gene name synonym)|uniprotkb:Enhanced disease susceptibility 1(gene name synonym)|uniprotkb:T17F15.40(orf name)|uniprotkb:At3g48090(locus name) psi-mi:eds1c_arath(display_long)|uniprotkb:EDS1(gene name)|psi-mi:EDS1(display_short)|uniprotkb:EDS1-90(gene name synonym)|uniprotkb:EDS1A(gene name synonym)|uniprotkb:Enhanced disease susceptibility 1(gene name synonym)|uniprotkb:T17F15.40(orf name)|uniprotkb:At3g48090(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813331|imex:IM-25758-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_190392.1|interpro:IPR002921(Lipase, class 3)|refseq:NP_001030829.1|interpro:IPR029058|interpro:IPR044214|interpro:IPR041266|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006629"(lipid metabolic process)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009627"(systemic acquired resistance)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010618"(aerenchyma formation)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0016298"(lipase activity)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0060866"(leaf abscission)|ensemblplants:AT3G48090(gene)|ensemblplants:AT3G48090.1(transcript)|go:"GO:0000304"(response to singlet oxygen)|go:"GO:0001666"(response to hypoxia) refseq:NP_190392.1|interpro:IPR002921(Lipase, class 3)|refseq:NP_001030829.1|interpro:IPR029058|interpro:IPR044214|interpro:IPR041266|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006629"(lipid metabolic process)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009627"(systemic acquired resistance)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010618"(aerenchyma formation)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0016298"(lipase activity)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0060866"(leaf abscission)|ensemblplants:AT3G48090(gene)|ensemblplants:AT3G48090.1(transcript)|go:"GO:0000304"(response to singlet oxygen)|go:"GO:0001666"(response to hypoxia) go:"GO:0005634"(nucleus) - - figure legend:supplementary table 3, supplementary Fig 4A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:121+PBgHGiGtxGt/JF98lYtysH03702 rogid:121+PBgHGiGtxGt/JF98lYtysH03702 rigid:NmYsbv34qpIZgcoNTGrUpJOzVbY false cGFP:c-c nGFP:c-c - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9S745 uniprotkb:Q9SU72 intact:EBI-1390441|uniprotkb:B0ZUC0|ensemblplants:AT3G52430.1 intact:EBI-1390454|uniprotkb:B9DFM5|ensemblplants:AT3G48090.1 psi-mi:pad4_arath(display_long)|uniprotkb:PAD4(gene name)|psi-mi:PAD4(display_short)|uniprotkb:EDS9(gene name synonym)|uniprotkb:Protein ENHANCED DISEASE SUSCEPTIBILITY 9(gene name synonym)|uniprotkb:Protein PHYTOALEXIN DEFICIENT 4(gene name synonym)|uniprotkb:F22O6.190(orf name)|uniprotkb:At3g52430(locus name) psi-mi:eds1c_arath(display_long)|uniprotkb:EDS1(gene name)|psi-mi:EDS1(display_short)|uniprotkb:EDS1-90(gene name synonym)|uniprotkb:EDS1A(gene name synonym)|uniprotkb:Enhanced disease susceptibility 1(gene name synonym)|uniprotkb:T17F15.40(orf name)|uniprotkb:At3g48090(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813364|imex:IM-25758-18 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_190811.1|interpro:IPR002921(Lipase, class 3)|interpro:IPR029058|interpro:IPR041266|ensemblplants:AT3G52430(gene)|ensemblplants:AT3G52430.1(transcript)|go:"GO:0001666"(response to hypoxia)|go:"GO:0002213"(defense response to insect)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009617"(response to bacterium)|go:"GO:0009625"(response to insect)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009627"(systemic acquired resistance)|go:"GO:0009751"(response to salicylic acid)|go:"GO:0009862"(systemic acquired resistance, salicylic acid mediated signaling pathway)|go:"GO:0009873"(ethylene-activated signaling pathway)|go:"GO:0010105"(negative regulation of ethylene-activated signaling pathway)|go:"GO:0010150"(leaf senescence)|go:"GO:0010225"(response to UV-C)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010618"(aerenchyma formation)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0016042"(lipid catabolic process)|go:"GO:0016298"(lipase activity)|go:"GO:0016740"(transferase activity)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0051707"(response to other organism)|go:"GO:0060866"(leaf abscission)|go:"GO:0071327"(cellular response to trehalose stimulus)|go:"GO:0080142"(regulation of salicylic acid biosynthetic process)|go:"GO:0080151"(positive regulation of salicylic acid mediated signaling pathway)|go:"GO:1900367"(positive regulation of defense response to insect)|go:"GO:1900426"(positive regulation of defense response to bacterium)|go:"GO:1901183"(positive regulation of camalexin biosynthetic process)|go:"GO:2000022"(regulation of jasmonic acid mediated signaling pathway)|go:"GO:2000031"(regulation of salicylic acid mediated signaling pathway) refseq:NP_190392.1|interpro:IPR002921(Lipase, class 3)|refseq:NP_001030829.1|interpro:IPR029058|interpro:IPR044214|interpro:IPR041266|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006629"(lipid metabolic process)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009627"(systemic acquired resistance)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010618"(aerenchyma formation)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0016298"(lipase activity)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0060866"(leaf abscission)|ensemblplants:AT3G48090(gene)|ensemblplants:AT3G48090.1(transcript)|go:"GO:0000304"(response to singlet oxygen)|go:"GO:0001666"(response to hypoxia) go:"GO:0005634"(nucleus) - - figure legend:supplementary table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:4tXV4uJP8u584SM8gEyqbxTmggM3702 rogid:121+PBgHGiGtxGt/JF98lYtysH03702 rigid:MlpsutaaGcgw5OuRwbe90GpqE1A false cGFP:n-n nGFP:c-c - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9S745 uniprotkb:Q9SU72 intact:EBI-1390441|uniprotkb:B0ZUC0|ensemblplants:AT3G52430.1 intact:EBI-1390454|uniprotkb:B9DFM5|ensemblplants:AT3G48090.1 psi-mi:pad4_arath(display_long)|uniprotkb:PAD4(gene name)|psi-mi:PAD4(display_short)|uniprotkb:EDS9(gene name synonym)|uniprotkb:Protein ENHANCED DISEASE SUSCEPTIBILITY 9(gene name synonym)|uniprotkb:Protein PHYTOALEXIN DEFICIENT 4(gene name synonym)|uniprotkb:F22O6.190(orf name)|uniprotkb:At3g52430(locus name) psi-mi:eds1c_arath(display_long)|uniprotkb:EDS1(gene name)|psi-mi:EDS1(display_short)|uniprotkb:EDS1-90(gene name synonym)|uniprotkb:EDS1A(gene name synonym)|uniprotkb:Enhanced disease susceptibility 1(gene name synonym)|uniprotkb:T17F15.40(orf name)|uniprotkb:At3g48090(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813375|imex:IM-25758-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_190811.1|interpro:IPR002921(Lipase, class 3)|interpro:IPR029058|interpro:IPR041266|ensemblplants:AT3G52430(gene)|ensemblplants:AT3G52430.1(transcript)|go:"GO:0001666"(response to hypoxia)|go:"GO:0002213"(defense response to insect)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009617"(response to bacterium)|go:"GO:0009625"(response to insect)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009627"(systemic acquired resistance)|go:"GO:0009751"(response to salicylic acid)|go:"GO:0009862"(systemic acquired resistance, salicylic acid mediated signaling pathway)|go:"GO:0009873"(ethylene-activated signaling pathway)|go:"GO:0010105"(negative regulation of ethylene-activated signaling pathway)|go:"GO:0010150"(leaf senescence)|go:"GO:0010225"(response to UV-C)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010618"(aerenchyma formation)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0016042"(lipid catabolic process)|go:"GO:0016298"(lipase activity)|go:"GO:0016740"(transferase activity)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0051707"(response to other organism)|go:"GO:0060866"(leaf abscission)|go:"GO:0071327"(cellular response to trehalose stimulus)|go:"GO:0080142"(regulation of salicylic acid biosynthetic process)|go:"GO:0080151"(positive regulation of salicylic acid mediated signaling pathway)|go:"GO:1900367"(positive regulation of defense response to insect)|go:"GO:1900426"(positive regulation of defense response to bacterium)|go:"GO:1901183"(positive regulation of camalexin biosynthetic process)|go:"GO:2000022"(regulation of jasmonic acid mediated signaling pathway)|go:"GO:2000031"(regulation of salicylic acid mediated signaling pathway) refseq:NP_190392.1|interpro:IPR002921(Lipase, class 3)|refseq:NP_001030829.1|interpro:IPR029058|interpro:IPR044214|interpro:IPR041266|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006629"(lipid metabolic process)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009627"(systemic acquired resistance)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010618"(aerenchyma formation)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0016298"(lipase activity)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0060866"(leaf abscission)|ensemblplants:AT3G48090(gene)|ensemblplants:AT3G48090.1(transcript)|go:"GO:0000304"(response to singlet oxygen)|go:"GO:0001666"(response to hypoxia) go:"GO:0005634"(nucleus) - - figure legend:supplementary table 3, supplementary Fig 4A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:4tXV4uJP8u584SM8gEyqbxTmggM3702 rogid:121+PBgHGiGtxGt/JF98lYtysH03702 rigid:MlpsutaaGcgw5OuRwbe90GpqE1A false cGFP:n-n nGFP:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P94077 uniprotkb:Q9SU72 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-1390454|uniprotkb:B9DFM5|ensemblplants:AT3G48090.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:eds1c_arath(display_long)|uniprotkb:EDS1(gene name)|psi-mi:EDS1(display_short)|uniprotkb:EDS1-90(gene name synonym)|uniprotkb:EDS1A(gene name synonym)|uniprotkb:Enhanced disease susceptibility 1(gene name synonym)|uniprotkb:T17F15.40(orf name)|uniprotkb:At3g48090(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813386|imex:IM-25758-28 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_190392.1|interpro:IPR002921(Lipase, class 3)|refseq:NP_001030829.1|interpro:IPR029058|interpro:IPR044214|interpro:IPR041266|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006629"(lipid metabolic process)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009627"(systemic acquired resistance)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010618"(aerenchyma formation)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0016298"(lipase activity)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0060866"(leaf abscission)|ensemblplants:AT3G48090(gene)|ensemblplants:AT3G48090.1(transcript)|go:"GO:0000304"(response to singlet oxygen)|go:"GO:0001666"(response to hypoxia) go:"GO:0005634"(nucleus) - - figure legend:supplementary table 3, F2A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:121+PBgHGiGtxGt/JF98lYtysH03702 rigid:ujIshbXRYNv/IQujLPHytGk0XPw false cGFP:c-c nGFP:c-c - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9SU72 uniprotkb:P94077 intact:EBI-1390454|uniprotkb:B9DFM5|ensemblplants:AT3G48090.1 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:eds1c_arath(display_long)|uniprotkb:EDS1(gene name)|psi-mi:EDS1(display_short)|uniprotkb:EDS1-90(gene name synonym)|uniprotkb:EDS1A(gene name synonym)|uniprotkb:Enhanced disease susceptibility 1(gene name synonym)|uniprotkb:T17F15.40(orf name)|uniprotkb:At3g48090(locus name) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813397|imex:IM-25758-62 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_190392.1|interpro:IPR002921(Lipase, class 3)|refseq:NP_001030829.1|interpro:IPR029058|interpro:IPR044214|interpro:IPR041266|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006629"(lipid metabolic process)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009627"(systemic acquired resistance)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010618"(aerenchyma formation)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0016298"(lipase activity)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0060866"(leaf abscission)|ensemblplants:AT3G48090(gene)|ensemblplants:AT3G48090.1(transcript)|go:"GO:0000304"(response to singlet oxygen)|go:"GO:0001666"(response to hypoxia) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) go:"GO:0005634"(nucleus) - - figure legend:supplementary table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:121+PBgHGiGtxGt/JF98lYtysH03702 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rigid:ujIshbXRYNv/IQujLPHytGk0XPw false cGFP:c-c nGFP:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9SU72 uniprotkb:Q9S745 intact:EBI-1390454|uniprotkb:B9DFM5|ensemblplants:AT3G48090.1 intact:EBI-1390441|uniprotkb:B0ZUC0|ensemblplants:AT3G52430.1 psi-mi:eds1c_arath(display_long)|uniprotkb:EDS1(gene name)|psi-mi:EDS1(display_short)|uniprotkb:EDS1-90(gene name synonym)|uniprotkb:EDS1A(gene name synonym)|uniprotkb:Enhanced disease susceptibility 1(gene name synonym)|uniprotkb:T17F15.40(orf name)|uniprotkb:At3g48090(locus name) psi-mi:pad4_arath(display_long)|uniprotkb:PAD4(gene name)|psi-mi:PAD4(display_short)|uniprotkb:EDS9(gene name synonym)|uniprotkb:Protein ENHANCED DISEASE SUSCEPTIBILITY 9(gene name synonym)|uniprotkb:Protein PHYTOALEXIN DEFICIENT 4(gene name synonym)|uniprotkb:F22O6.190(orf name)|uniprotkb:At3g52430(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813342|imex:IM-25758-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_190392.1|interpro:IPR002921(Lipase, class 3)|refseq:NP_001030829.1|interpro:IPR029058|interpro:IPR044214|interpro:IPR041266|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006629"(lipid metabolic process)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009627"(systemic acquired resistance)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010618"(aerenchyma formation)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0016298"(lipase activity)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0060866"(leaf abscission)|ensemblplants:AT3G48090(gene)|ensemblplants:AT3G48090.1(transcript)|go:"GO:0000304"(response to singlet oxygen)|go:"GO:0001666"(response to hypoxia) refseq:NP_190811.1|interpro:IPR002921(Lipase, class 3)|interpro:IPR029058|interpro:IPR041266|ensemblplants:AT3G52430(gene)|ensemblplants:AT3G52430.1(transcript)|go:"GO:0001666"(response to hypoxia)|go:"GO:0002213"(defense response to insect)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009617"(response to bacterium)|go:"GO:0009625"(response to insect)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009627"(systemic acquired resistance)|go:"GO:0009751"(response to salicylic acid)|go:"GO:0009862"(systemic acquired resistance, salicylic acid mediated signaling pathway)|go:"GO:0009873"(ethylene-activated signaling pathway)|go:"GO:0010105"(negative regulation of ethylene-activated signaling pathway)|go:"GO:0010150"(leaf senescence)|go:"GO:0010225"(response to UV-C)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010618"(aerenchyma formation)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0016042"(lipid catabolic process)|go:"GO:0016298"(lipase activity)|go:"GO:0016740"(transferase activity)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0051707"(response to other organism)|go:"GO:0060866"(leaf abscission)|go:"GO:0071327"(cellular response to trehalose stimulus)|go:"GO:0080142"(regulation of salicylic acid biosynthetic process)|go:"GO:0080151"(positive regulation of salicylic acid mediated signaling pathway)|go:"GO:1900367"(positive regulation of defense response to insect)|go:"GO:1900426"(positive regulation of defense response to bacterium)|go:"GO:1901183"(positive regulation of camalexin biosynthetic process)|go:"GO:2000022"(regulation of jasmonic acid mediated signaling pathway)|go:"GO:2000031"(regulation of salicylic acid mediated signaling pathway) go:"GO:0005634"(nucleus) - - figure legend:supplementary table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:121+PBgHGiGtxGt/JF98lYtysH03702 rogid:4tXV4uJP8u584SM8gEyqbxTmggM3702 rigid:MlpsutaaGcgw5OuRwbe90GpqE1A false cGFP:n-n nGFP:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9S745 uniprotkb:Q9SU72 intact:EBI-1390441|uniprotkb:B0ZUC0|ensemblplants:AT3G52430.1 intact:EBI-1390454|uniprotkb:B9DFM5|ensemblplants:AT3G48090.1 psi-mi:pad4_arath(display_long)|uniprotkb:PAD4(gene name)|psi-mi:PAD4(display_short)|uniprotkb:EDS9(gene name synonym)|uniprotkb:Protein ENHANCED DISEASE SUSCEPTIBILITY 9(gene name synonym)|uniprotkb:Protein PHYTOALEXIN DEFICIENT 4(gene name synonym)|uniprotkb:F22O6.190(orf name)|uniprotkb:At3g52430(locus name) psi-mi:eds1c_arath(display_long)|uniprotkb:EDS1(gene name)|psi-mi:EDS1(display_short)|uniprotkb:EDS1-90(gene name synonym)|uniprotkb:EDS1A(gene name synonym)|uniprotkb:Enhanced disease susceptibility 1(gene name synonym)|uniprotkb:T17F15.40(orf name)|uniprotkb:At3g48090(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813353|imex:IM-25758-26 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_190811.1|interpro:IPR002921(Lipase, class 3)|interpro:IPR029058|interpro:IPR041266|ensemblplants:AT3G52430(gene)|ensemblplants:AT3G52430.1(transcript)|go:"GO:0001666"(response to hypoxia)|go:"GO:0002213"(defense response to insect)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009617"(response to bacterium)|go:"GO:0009625"(response to insect)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009627"(systemic acquired resistance)|go:"GO:0009751"(response to salicylic acid)|go:"GO:0009862"(systemic acquired resistance, salicylic acid mediated signaling pathway)|go:"GO:0009873"(ethylene-activated signaling pathway)|go:"GO:0010105"(negative regulation of ethylene-activated signaling pathway)|go:"GO:0010150"(leaf senescence)|go:"GO:0010225"(response to UV-C)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010618"(aerenchyma formation)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0016042"(lipid catabolic process)|go:"GO:0016298"(lipase activity)|go:"GO:0016740"(transferase activity)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0051707"(response to other organism)|go:"GO:0060866"(leaf abscission)|go:"GO:0071327"(cellular response to trehalose stimulus)|go:"GO:0080142"(regulation of salicylic acid biosynthetic process)|go:"GO:0080151"(positive regulation of salicylic acid mediated signaling pathway)|go:"GO:1900367"(positive regulation of defense response to insect)|go:"GO:1900426"(positive regulation of defense response to bacterium)|go:"GO:1901183"(positive regulation of camalexin biosynthetic process)|go:"GO:2000022"(regulation of jasmonic acid mediated signaling pathway)|go:"GO:2000031"(regulation of salicylic acid mediated signaling pathway) refseq:NP_190392.1|interpro:IPR002921(Lipase, class 3)|refseq:NP_001030829.1|interpro:IPR029058|interpro:IPR044214|interpro:IPR041266|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006629"(lipid metabolic process)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009627"(systemic acquired resistance)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010618"(aerenchyma formation)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0016298"(lipase activity)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0060866"(leaf abscission)|ensemblplants:AT3G48090(gene)|ensemblplants:AT3G48090.1(transcript)|go:"GO:0000304"(response to singlet oxygen)|go:"GO:0001666"(response to hypoxia) go:"GO:0005634"(nucleus) - - figure legend:supplementary table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:4tXV4uJP8u584SM8gEyqbxTmggM3702 rogid:121+PBgHGiGtxGt/JF98lYtysH03702 rigid:MlpsutaaGcgw5OuRwbe90GpqE1A false cGFP:c-c nGFP:c-c - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P94077 uniprotkb:Q8S944 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-2265428|uniprotkb:O22403|uniprotkb:O81882|uniprotkb:Q94CF3|ensemblplants:AT4G33650.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:drp3a_arath(display_long)|uniprotkb:DRP3A(gene name)|psi-mi:DRP3A(display_short)|uniprotkb:ADL2(gene name synonym)|uniprotkb:ADL2A(gene name synonym)|uniprotkb:Dynamin-like protein 2a(gene name synonym)|uniprotkb:Dynamin-like protein 2(gene name synonym)|uniprotkb:T16L1.140(orf name)|uniprotkb:At4g33650(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813408|imex:IM-25758-30 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_567931.1|dip:DIP-47338N|ensemblplants:AT4G33650(gene)|ensemblplants:AT4G33650.1(transcript)|go:"GO:0000266"(mitochondrial fission)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005777"(peroxisome)|go:"GO:0007031"(peroxisome organization)|go:"GO:0007049"(cell cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0051301"(cell division)|interpro:IPR000375(Dynamin central region)|interpro:IPR001401(Dynamin, GTPase region)|interpro:IPR003130(Dynamin GTPase effector)|interpro:IPR019762|interpro:IPR020850|interpro:IPR022812|interpro:IPR027417|interpro:IPR030381 - - - figure legend:supplementary table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:DGFib0QGXYSARwzfaQD5PCOwgX03702 rigid:Db5va4CTzbXr2JUBkaseRbpHD58 false cGFP:c-c nGFP:c-c - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P94077 uniprotkb:Q8S944 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-2265428|uniprotkb:O22403|uniprotkb:O81882|uniprotkb:Q94CF3|ensemblplants:AT4G33650.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:drp3a_arath(display_long)|uniprotkb:DRP3A(gene name)|psi-mi:DRP3A(display_short)|uniprotkb:ADL2(gene name synonym)|uniprotkb:ADL2A(gene name synonym)|uniprotkb:Dynamin-like protein 2a(gene name synonym)|uniprotkb:Dynamin-like protein 2(gene name synonym)|uniprotkb:T16L1.140(orf name)|uniprotkb:At4g33650(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813418|imex:IM-25758-20 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_567931.1|dip:DIP-47338N|ensemblplants:AT4G33650(gene)|ensemblplants:AT4G33650.1(transcript)|go:"GO:0000266"(mitochondrial fission)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005777"(peroxisome)|go:"GO:0007031"(peroxisome organization)|go:"GO:0007049"(cell cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0051301"(cell division)|interpro:IPR000375(Dynamin central region)|interpro:IPR001401(Dynamin, GTPase region)|interpro:IPR003130(Dynamin GTPase effector)|interpro:IPR019762|interpro:IPR020850|interpro:IPR022812|interpro:IPR027417|interpro:IPR030381 - - - figure legend:supplementary table 3, supplementary Fig 8i|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:DGFib0QGXYSARwzfaQD5PCOwgX03702 rigid:Db5va4CTzbXr2JUBkaseRbpHD58 false cGFP:c-c nGFP:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q8S944 uniprotkb:P94077 intact:EBI-2265428|uniprotkb:O22403|uniprotkb:O81882|uniprotkb:Q94CF3|ensemblplants:AT4G33650.1 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:drp3a_arath(display_long)|uniprotkb:DRP3A(gene name)|psi-mi:DRP3A(display_short)|uniprotkb:ADL2(gene name synonym)|uniprotkb:ADL2A(gene name synonym)|uniprotkb:Dynamin-like protein 2a(gene name synonym)|uniprotkb:Dynamin-like protein 2(gene name synonym)|uniprotkb:T16L1.140(orf name)|uniprotkb:At4g33650(locus name) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813428|imex:IM-25758-22 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_567931.1|dip:DIP-47338N|ensemblplants:AT4G33650(gene)|ensemblplants:AT4G33650.1(transcript)|go:"GO:0000266"(mitochondrial fission)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005777"(peroxisome)|go:"GO:0007031"(peroxisome organization)|go:"GO:0007049"(cell cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0051301"(cell division)|interpro:IPR000375(Dynamin central region)|interpro:IPR001401(Dynamin, GTPase region)|interpro:IPR003130(Dynamin GTPase effector)|interpro:IPR019762|interpro:IPR020850|interpro:IPR022812|interpro:IPR027417|interpro:IPR030381 refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:supplementary table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:DGFib0QGXYSARwzfaQD5PCOwgX03702 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rigid:Db5va4CTzbXr2JUBkaseRbpHD58 false cGFP:c-c nGFP:c-c - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q8S944 uniprotkb:P94077 intact:EBI-2265428|uniprotkb:O22403|uniprotkb:O81882|uniprotkb:Q94CF3|ensemblplants:AT4G33650.1 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:drp3a_arath(display_long)|uniprotkb:DRP3A(gene name)|psi-mi:DRP3A(display_short)|uniprotkb:ADL2(gene name synonym)|uniprotkb:ADL2A(gene name synonym)|uniprotkb:Dynamin-like protein 2a(gene name synonym)|uniprotkb:Dynamin-like protein 2(gene name synonym)|uniprotkb:T16L1.140(orf name)|uniprotkb:At4g33650(locus name) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813438|imex:IM-25758-12 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_567931.1|dip:DIP-47338N|ensemblplants:AT4G33650(gene)|ensemblplants:AT4G33650.1(transcript)|go:"GO:0000266"(mitochondrial fission)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005777"(peroxisome)|go:"GO:0007031"(peroxisome organization)|go:"GO:0007049"(cell cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0051301"(cell division)|interpro:IPR000375(Dynamin central region)|interpro:IPR001401(Dynamin, GTPase region)|interpro:IPR003130(Dynamin GTPase effector)|interpro:IPR019762|interpro:IPR020850|interpro:IPR022812|interpro:IPR027417|interpro:IPR030381 refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:supplementary table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:DGFib0QGXYSARwzfaQD5PCOwgX03702 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rigid:Db5va4CTzbXr2JUBkaseRbpHD58 false cGFP:c-c nGFP:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q8S944 uniprotkb:P94077 intact:EBI-2265428|uniprotkb:O22403|uniprotkb:O81882|uniprotkb:Q94CF3|ensemblplants:AT4G33650.1 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:drp3a_arath(display_long)|uniprotkb:DRP3A(gene name)|psi-mi:DRP3A(display_short)|uniprotkb:ADL2(gene name synonym)|uniprotkb:ADL2A(gene name synonym)|uniprotkb:Dynamin-like protein 2a(gene name synonym)|uniprotkb:Dynamin-like protein 2(gene name synonym)|uniprotkb:T16L1.140(orf name)|uniprotkb:At4g33650(locus name) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813448|imex:IM-25758-32 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_567931.1|dip:DIP-47338N|ensemblplants:AT4G33650(gene)|ensemblplants:AT4G33650.1(transcript)|go:"GO:0000266"(mitochondrial fission)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005777"(peroxisome)|go:"GO:0007031"(peroxisome organization)|go:"GO:0007049"(cell cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0051301"(cell division)|interpro:IPR000375(Dynamin central region)|interpro:IPR001401(Dynamin, GTPase region)|interpro:IPR003130(Dynamin GTPase effector)|interpro:IPR019762|interpro:IPR020850|interpro:IPR022812|interpro:IPR027417|interpro:IPR030381 refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:supplementary table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:DGFib0QGXYSARwzfaQD5PCOwgX03702 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rigid:Db5va4CTzbXr2JUBkaseRbpHD58 false cGFP:n-n nGFP:c-c - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q8S944 uniprotkb:P94077 intact:EBI-2265428|uniprotkb:O22403|uniprotkb:O81882|uniprotkb:Q94CF3|ensemblplants:AT4G33650.1 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:drp3a_arath(display_long)|uniprotkb:DRP3A(gene name)|psi-mi:DRP3A(display_short)|uniprotkb:ADL2(gene name synonym)|uniprotkb:ADL2A(gene name synonym)|uniprotkb:Dynamin-like protein 2a(gene name synonym)|uniprotkb:Dynamin-like protein 2(gene name synonym)|uniprotkb:T16L1.140(orf name)|uniprotkb:At4g33650(locus name) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813458|imex:IM-25758-14 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_567931.1|dip:DIP-47338N|ensemblplants:AT4G33650(gene)|ensemblplants:AT4G33650.1(transcript)|go:"GO:0000266"(mitochondrial fission)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005777"(peroxisome)|go:"GO:0007031"(peroxisome organization)|go:"GO:0007049"(cell cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0051301"(cell division)|interpro:IPR000375(Dynamin central region)|interpro:IPR001401(Dynamin, GTPase region)|interpro:IPR003130(Dynamin GTPase effector)|interpro:IPR019762|interpro:IPR020850|interpro:IPR022812|interpro:IPR027417|interpro:IPR030381 refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:supplementary table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:DGFib0QGXYSARwzfaQD5PCOwgX03702 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rigid:Db5va4CTzbXr2JUBkaseRbpHD58 false cGFP:n-n nGFP:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P94077 uniprotkb:Q8LFT2 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-2265511|uniprotkb:Q8LPH8|uniprotkb:Q8S8A4|uniprotkb:Q8S943|uniprotkb:Q9SI47|ensemblplants:AT2G14120.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:drp3b_arath(display_long)|uniprotkb:DRP3B(gene name)|psi-mi:DRP3B(display_short)|uniprotkb:ADL2B(gene name synonym)|uniprotkb:Dynamin-like protein 2b(gene name synonym)|uniprotkb:T22C12.1(orf name)|uniprotkb:At2g14120(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813468|imex:IM-25758-24 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) interpro:IPR030381|refseq:NP_565362.1|interpro:IPR022812|interpro:IPR000375(Dynamin central region)|interpro:IPR001401(Dynamin, GTPase region)|interpro:IPR019762|interpro:IPR003130(Dynamin GTPase effector)|interpro:IPR020850|interpro:IPR027417|ensemblplants:AT2G14120(gene)|ensemblplants:AT2G14120.1(transcript)|go:"GO:0000266"(mitochondrial fission)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005777"(peroxisome)|go:"GO:0007031"(peroxisome organization)|go:"GO:0007049"(cell cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0016020"(membrane)|go:"GO:0051301"(cell division) - - - figure legend:supplementary table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:KAmZ5h9ZPc2CmNC3+4c+/6Y9C4w3702 rigid:XFSMRAVtlGzVGenM7R31vlCzaZo false cGFP:c-c nGFP:c-c - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P94077 uniprotkb:Q8LFT2 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-2265511|uniprotkb:Q8LPH8|uniprotkb:Q8S8A4|uniprotkb:Q8S943|uniprotkb:Q9SI47|ensemblplants:AT2G14120.1 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:drp3b_arath(display_long)|uniprotkb:DRP3B(gene name)|psi-mi:DRP3B(display_short)|uniprotkb:ADL2B(gene name synonym)|uniprotkb:Dynamin-like protein 2b(gene name synonym)|uniprotkb:T22C12.1(orf name)|uniprotkb:At2g14120(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813478|imex:IM-25758-16 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) interpro:IPR030381|refseq:NP_565362.1|interpro:IPR022812|interpro:IPR000375(Dynamin central region)|interpro:IPR001401(Dynamin, GTPase region)|interpro:IPR019762|interpro:IPR003130(Dynamin GTPase effector)|interpro:IPR020850|interpro:IPR027417|ensemblplants:AT2G14120(gene)|ensemblplants:AT2G14120.1(transcript)|go:"GO:0000266"(mitochondrial fission)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005777"(peroxisome)|go:"GO:0007031"(peroxisome organization)|go:"GO:0007049"(cell cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0016020"(membrane)|go:"GO:0051301"(cell division) - - - figure legend:supplementary table 3, supplementary Fig 8k|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/11/01 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:KAmZ5h9ZPc2CmNC3+4c+/6Y9C4w3702 rigid:XFSMRAVtlGzVGenM7R31vlCzaZo false cGFP:c-c nGFP:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P94077 uniprotkb:P94077 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-21002732|imex:IM-25758-64 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) go:"GO:0005634"(nucleus) - - figure legend:supplementary table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") - 2017/06/07 2018/12/05 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 rigid:z/uCcoiub3apyfPhEyDxnKYMbck false cGFP:c-c nGFP:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) ensemblgenomes:AT3G55970 uniprotkb:P94077 intact:EBI-20813518 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:jrg21_arath_gene(display_short)|psi-mi:AT3G55970(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813520|imex:IM-25758-57 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) - refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/12/04 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT1G67980 uniprotkb:P94077 intact:EBI-20813506 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:ccoamt_arath_gene(display_short)|psi-mi:AT1G67980(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813508|imex:IM-25758-55 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) - refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/12/04 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT2G14610.1 uniprotkb:P94077 intact:EBI-20813542 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:pr1_arath_gene(display_short)|psi-mi:AT2G14610.1(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813545|imex:IM-25758-59 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) refseq:NP_179068.1(see-also) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/11/01 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT5G13320 uniprotkb:P94077 intact:EBI-20813530 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:gh3.12_arath_gene(display_short)|psi-mi:AT5G13320(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813532|imex:IM-25758-33 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) - refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/12/04 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT1G56600 uniprotkb:P94077 intact:EBI-20813494 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:gols2_arath_gene(display_short)|psi-mi:AT1G56600(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813496|imex:IM-25758-53 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) - refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/12/04 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT5G06520.1 uniprotkb:P94077 intact:EBI-20813649 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:q9fg18_arath_gene(display_short)|psi-mi:AT5G06520.1(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813652|imex:IM-25758-47 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) refseq:NP_196270.1(see-also) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/11/01 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT4G17470.4 uniprotkb:P94077 intact:EBI-20813630 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:q501g7_arath_gene(display_short)|psi-mi:AT4G17470.4(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813639|imex:IM-25758-45 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) refseq:NP_001190752.1(see-also)|refseq:NP_001190753.1(see-also)|refseq:NP_001319975.1(see-also)|refseq:NP_193477.1(see-also)|ensemblgenomes:AT4G17470.1(see-also)|ensemblgenomes:AT4G17470.2(see-also)|ensemblgenomes:AT4G17470.3(see-also) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/11/01 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT5G54610.1 uniprotkb:P94077 intact:EBI-20813674 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 uniprotkb:BAD1(gene name)|psi-mi:BAD1(display_short)|ensembl:bad1_arath_gene(shortlabel)|psi-mi:AT5G54610.1(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813678|imex:IM-25758-51 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) refseq:NP_200272.2(see-also) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/11/01 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT3G50770.1 uniprotkb:P94077 intact:EBI-20813579 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 uniprotkb:CML41(gene name)|psi-mi:CML41(display_short)|ensembl:cml41_arath_gene(shortlabel)|psi-mi:AT3G50770.1(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813583|imex:IM-25758-39 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) refseq:NP_190646.1(see-also) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/11/01 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT4G33720 uniprotkb:P94077 intact:EBI-20818785 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:cap_arath_gene(display_short)|psi-mi:AT4G33720(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813557|imex:IM-25758-35 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) - refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/12/04 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT2G26020 uniprotkb:P94077 intact:EBI-20813567 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:pdf1.2b_arath_gene(display_short)|psi-mi:AT2G26020(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813569|imex:IM-25758-37 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) - refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/12/04 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT1G16260 uniprotkb:P94077 intact:EBI-20813662 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:wakl8_arath_gene(display_short)|psi-mi:AT1G16260(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813664|imex:IM-25758-49 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) - refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/12/04 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT3G05950.1 uniprotkb:P94077 intact:EBI-20813605 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:gl17_arath_gene(display_short)|psi-mi:AT3G05950.1(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813608|imex:IM-25758-43 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) refseq:NP_187246.1(see-also) refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/11/01 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT4G11900 uniprotkb:P94077 intact:EBI-20813593 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:slpk_arath_gene(display_short)|psi-mi:AT4G11900(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813595|imex:IM-25758-41 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) - refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/12/04 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr) ensemblgenomes:AT3G12220 uniprotkb:P94077 intact:EBI-20813618 intact:EBI-5849461|uniprotkb:C0Z316|uniprotkb:Q8RXL2|ensemblplants:AT4G20380.2|ensemblplants:AT4G20380.7 psi-mi:scpl16_arath_gene(display_short)|psi-mi:AT3G12220(display_long) psi-mi:lsd1_arath(display_long)|uniprotkb:LSD1(gene name)|psi-mi:LSD1(display_short)|uniprotkb:CHS4(gene name synonym)|uniprotkb:Protein CHILLING SENSITIVE 4(gene name synonym)|uniprotkb:Protein LESION SIMULATING DISEASE 1(gene name synonym)|uniprotkb:Putative zinc finger LSD1(gene name synonym)|uniprotkb:F9F13.30(orf name)|uniprotkb:At4g20380(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Czarnocka et al. (2017) pubmed:28555890|imex:IM-25758|doi:10.1111/pce.12994 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-20813620|imex:IM-25758-61 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) - refseq:NP_001031678.1|refseq:NP_001031679.1|refseq:NP_001031680.2|refseq:NP_001078413.1|refseq:NP_567599.3|refseq:NP_849548.1|refseq:NP_849549.1|interpro:IPR005735(Zinc finger, LSD1-type)|mint:P94077|interpro:IPR040319|ensemblplants:AT4G20380(gene)|ensemblplants:AT4G20380.2(transcript)|ensemblplants:AT4G20380.7(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0043069"(negative regulation of programmed cell death) - - - figure legend:Table2, Table3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/06/07 2018/12/04 - rogid:HYafSNpK0tZcAUjHI8k2DDOeaaM3702 - false sufficient binding region:?-? green fluorescent protein tag:c-c - - psi-mi:"MI:0088"(primer specific pcr) psi-mi:"MI:0088"(primer specific pcr)