#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:Q99325	uniprotkb:P38182	intact:EBI-3681992|uniprotkb:D6W2K9|ensemblfungi:YOR152C	intact:EBI-2684|uniprotkb:D6VPS5|ensemblfungi:YBL078C	psi-mi:atg40_yeast(display_long)|uniprotkb:ATG40(gene name)|psi-mi:ATG40(display_short)|uniprotkb:O3536(orf name)|uniprotkb:YOR152C(locus name)	psi-mi:atg8_yeast(display_long)|uniprotkb:ATG8(gene name)|psi-mi:ATG8(display_short)|uniprotkb:APG8(gene name synonym)|uniprotkb:AUT7(gene name synonym)|uniprotkb:YBL078C(locus name)|uniprotkb:YBL0732(orf name)|uniprotkb:CVT5(gene name synonym)|uniprotkb:Autophagy-related ubiquitin-like modifier ATG8(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 5(gene name synonym)	psi-mi:"MI:0018"(two hybrid)	Mochida et al. (2015)	pubmed:26040717|doi:10.1038/nature14506|imex:IM-24569	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0465"(DIP)	intact:EBI-16158827|imex:IM-24569-3|dip:DIP-199218E	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000005678|refseq:NP_014795.1|dip:DIP-61576N|ensemblfungi:YOR152C(gene)|ensemblfungi:YOR152C_mRNA(transcript)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0032541"(cortical endoplasmic reticulum)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0061709"(reticulophagy)|rcsb pdb:7BRN	sgd:S000000174|refseq:NP_009475.1|dip:DIP-1197N|mint:P38182|ensemblfungi:YBL078C(gene)|ensemblfungi:YBL078C_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0008429"(phosphatidylethanolamine binding)|go:"GO:0016236"(macroautophagy)|go:"GO:0016241"(regulation of macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0031386"(protein tag)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0033110"(Cvt vesicle membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0034629"|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0044805"(late nucleophagy)|go:"GO:0061025"(membrane fusion)|go:"GO:0061709"(reticulophagy)|go:"GO:0071211"(protein targeting to vacuole involved in autophagy)|go:"GO:0120095"(vacuole-isolation membrane contact site)|go:"GO:1905153"(regulation of membrane invagination)|interpro:IPR004241("Light chain 3 (LC3)")|interpro:IPR029071|rcsb pdb:2KQ7|rcsb pdb:2KWC|rcsb pdb:2LI5|rcsb pdb:2ZPN|rcsb pdb:3RUI|rcsb pdb:3VH3|rcsb pdb:3VH4|rcsb pdb:3VXW|rcsb pdb:5YEC|rcsb pdb:6AAG|rcsb pdb:6WY6|rcsb pdb:7BRN|reactome:R-SCE-1632852|reactome:R-SCE-8854214|reactome:R-SCE-8934903	psi-mi:"MI:0465"(dip)	crc64:FD4951C817E2AD0F	crc64:1246CEFF5A038819	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2017/08/08	2017/08/10	rogid:iq3f8d2kcGe15PAwXwFtpWYvNdE559292	rogid:UlmpBW3JgdYFHLkZCQeJeb7DpK4559292	rigid:0/Cgme9Ul4y9sHuzeysRrSRiUZQ	false	-	mutation disrupting interaction strength:67-67,52-52	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q06159	uniprotkb:P38182	intact:EBI-33888|uniprotkb:D6VYV5|ensemblfungi:YLR312C	intact:EBI-2684|uniprotkb:D6VPS5|ensemblfungi:YBL078C	psi-mi:atg39_yeast(display_long)|uniprotkb:ATG39(gene name)|psi-mi:ATG39(display_short)|uniprotkb:YLR312C(locus name)	psi-mi:atg8_yeast(display_long)|uniprotkb:ATG8(gene name)|psi-mi:ATG8(display_short)|uniprotkb:APG8(gene name synonym)|uniprotkb:AUT7(gene name synonym)|uniprotkb:YBL078C(locus name)|uniprotkb:YBL0732(orf name)|uniprotkb:CVT5(gene name synonym)|uniprotkb:Autophagy-related ubiquitin-like modifier ATG8(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 5(gene name synonym)	psi-mi:"MI:0018"(two hybrid)	Mochida et al. (2015)	pubmed:26040717|doi:10.1038/nature14506|imex:IM-24569	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0465"(DIP)	intact:EBI-16158806|imex:IM-24569-2|dip:DIP-199217E	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004303|refseq:NP_013415.1|mint:Q06159|dip:DIP-1453N|ensemblfungi:YLR312C(gene)|ensemblfungi:YLR312C_mRNA(transcript)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0061709"(reticulophagy)|go:"GO:0097038"(perinuclear endoplasmic reticulum)	sgd:S000000174|refseq:NP_009475.1|dip:DIP-1197N|mint:P38182|ensemblfungi:YBL078C(gene)|ensemblfungi:YBL078C_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0008429"(phosphatidylethanolamine binding)|go:"GO:0016236"(macroautophagy)|go:"GO:0016241"(regulation of macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0031386"(protein tag)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0033110"(Cvt vesicle membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0034629"|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0044805"(late nucleophagy)|go:"GO:0061025"(membrane fusion)|go:"GO:0061709"(reticulophagy)|go:"GO:0071211"(protein targeting to vacuole involved in autophagy)|go:"GO:0120095"(vacuole-isolation membrane contact site)|go:"GO:1905153"(regulation of membrane invagination)|interpro:IPR004241("Light chain 3 (LC3)")|interpro:IPR029071|rcsb pdb:2KQ7|rcsb pdb:2KWC|rcsb pdb:2LI5|rcsb pdb:2ZPN|rcsb pdb:3RUI|rcsb pdb:3VH3|rcsb pdb:3VH4|rcsb pdb:3VXW|rcsb pdb:5YEC|rcsb pdb:6AAG|rcsb pdb:6WY6|rcsb pdb:7BRN|reactome:R-SCE-1632852|reactome:R-SCE-8854214|reactome:R-SCE-8934903	psi-mi:"MI:0465"(dip)	crc64:0592D785516D9F90	crc64:1246CEFF5A038819	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2017/08/08	2017/08/10	rogid:Q5U8fE6sOBBkY7yOTORPUtLa+cw559292	rogid:UlmpBW3JgdYFHLkZCQeJeb7DpK4559292	rigid:27YmXMnI/kyAzFCjDZT+J1Lz8JM	false	-	mutation disrupting interaction strength:67-67,52-52	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q06159	uniprotkb:P38182	intact:EBI-33888|uniprotkb:D6VYV5|ensemblfungi:YLR312C	intact:EBI-2684|uniprotkb:D6VPS5|ensemblfungi:YBL078C	psi-mi:atg39_yeast(display_long)|uniprotkb:ATG39(gene name)|psi-mi:ATG39(display_short)|uniprotkb:YLR312C(locus name)	psi-mi:atg8_yeast(display_long)|uniprotkb:ATG8(gene name)|psi-mi:ATG8(display_short)|uniprotkb:APG8(gene name synonym)|uniprotkb:AUT7(gene name synonym)|uniprotkb:YBL078C(locus name)|uniprotkb:YBL0732(orf name)|uniprotkb:CVT5(gene name synonym)|uniprotkb:Autophagy-related ubiquitin-like modifier ATG8(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 5(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Mochida et al. (2015)	pubmed:26040717|doi:10.1038/nature14506|imex:IM-24569	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0465"(DIP)	intact:EBI-16158781|imex:IM-24569-1|dip:DIP-199217E	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004303|refseq:NP_013415.1|mint:Q06159|dip:DIP-1453N|ensemblfungi:YLR312C(gene)|ensemblfungi:YLR312C_mRNA(transcript)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0061709"(reticulophagy)|go:"GO:0097038"(perinuclear endoplasmic reticulum)	sgd:S000000174|refseq:NP_009475.1|dip:DIP-1197N|mint:P38182|ensemblfungi:YBL078C(gene)|ensemblfungi:YBL078C_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0008429"(phosphatidylethanolamine binding)|go:"GO:0016236"(macroautophagy)|go:"GO:0016241"(regulation of macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0031386"(protein tag)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0033110"(Cvt vesicle membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0034629"|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0044805"(late nucleophagy)|go:"GO:0061025"(membrane fusion)|go:"GO:0061709"(reticulophagy)|go:"GO:0071211"(protein targeting to vacuole involved in autophagy)|go:"GO:0120095"(vacuole-isolation membrane contact site)|go:"GO:1905153"(regulation of membrane invagination)|interpro:IPR004241("Light chain 3 (LC3)")|interpro:IPR029071|rcsb pdb:2KQ7|rcsb pdb:2KWC|rcsb pdb:2LI5|rcsb pdb:2ZPN|rcsb pdb:3RUI|rcsb pdb:3VH3|rcsb pdb:3VH4|rcsb pdb:3VXW|rcsb pdb:5YEC|rcsb pdb:6AAG|rcsb pdb:6WY6|rcsb pdb:7BRN|reactome:R-SCE-1632852|reactome:R-SCE-8854214|reactome:R-SCE-8934903	psi-mi:"MI:0465"(dip)	crc64:0592D785516D9F90	crc64:1246CEFF5A038819	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2017/08/08	2017/08/10	rogid:Q5U8fE6sOBBkY7yOTORPUtLa+cw559292	rogid:UlmpBW3JgdYFHLkZCQeJeb7DpK4559292	rigid:27YmXMnI/kyAzFCjDZT+J1Lz8JM	false	ha tag:c-c|mutation disrupting interaction strength:8-8,11-11	green fluorescent protein tag:c-c	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q12527	uniprotkb:Q99325	intact:EBI-31977|uniprotkb:D6W457|ensemblfungi:YPR049C	intact:EBI-3681992|uniprotkb:D6W2K9|ensemblfungi:YOR152C	psi-mi:atg11_yeast(display_long)|uniprotkb:Cytoplasm to vacuole targeting protein 9(gene name synonym)|uniprotkb:ATG11(gene name)|psi-mi:ATG11(display_short)|uniprotkb:CVT9(gene name synonym)|uniprotkb:YPR049C(locus name)|uniprotkb:YP9499.07c(orf name)	psi-mi:atg40_yeast(display_long)|uniprotkb:ATG40(gene name)|psi-mi:ATG40(display_short)|uniprotkb:O3536(orf name)|uniprotkb:YOR152C(locus name)	psi-mi:"MI:0018"(two hybrid)	Mochida et al. (2015)	pubmed:26040717|doi:10.1038/nature14506|imex:IM-24569	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0465"(DIP)	intact:EBI-16158848|imex:IM-24569-4|dip:DIP-199220E	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015374.1|sgd:S000006253|dip:DIP-1492N|mint:Q12527|ensemblfungi:YPR049C(gene)|ensemblfungi:YPR049C_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000149"(SNARE binding)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0006914"(autophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0034629"|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0061709"(reticulophagy)|go:"GO:0140255"(regulation of cellular response to phosphate starvation)|go:"GO:1990316"(Atg1/ULK1 kinase complex)|go:"GO:2000786"(positive regulation of autophagosome assembly)|interpro:IPR019460|interpro:IPR040040|rcsb pdb:6VZF|reactome:R-SCE-1632852	sgd:S000005678|refseq:NP_014795.1|dip:DIP-61576N|ensemblfungi:YOR152C(gene)|ensemblfungi:YOR152C_mRNA(transcript)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0032541"(cortical endoplasmic reticulum)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0061709"(reticulophagy)|rcsb pdb:7BRN	psi-mi:"MI:0465"(dip)	crc64:A904B92E9AE79449	crc64:FD4951C817E2AD0F	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2017/08/08	2017/08/10	rogid:26PElwvrl3YKwoQU7YdkmR0ln3o559292	rogid:iq3f8d2kcGe15PAwXwFtpWYvNdE559292	rigid:+zjLuLfx1ZGenQ8RIQSo6MvJKG4	false	-	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q99325	uniprotkb:P38182	intact:EBI-3681992|uniprotkb:D6W2K9|ensemblfungi:YOR152C	intact:EBI-2684|uniprotkb:D6VPS5|ensemblfungi:YBL078C	psi-mi:atg40_yeast(display_long)|uniprotkb:ATG40(gene name)|psi-mi:ATG40(display_short)|uniprotkb:O3536(orf name)|uniprotkb:YOR152C(locus name)	psi-mi:atg8_yeast(display_long)|uniprotkb:ATG8(gene name)|psi-mi:ATG8(display_short)|uniprotkb:APG8(gene name synonym)|uniprotkb:AUT7(gene name synonym)|uniprotkb:YBL078C(locus name)|uniprotkb:YBL0732(orf name)|uniprotkb:CVT5(gene name synonym)|uniprotkb:Autophagy-related ubiquitin-like modifier ATG8(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 5(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Mochida et al. (2015)	pubmed:26040717|doi:10.1038/nature14506|imex:IM-24569	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0465"(DIP)	intact:EBI-16158865|imex:IM-24569-5|dip:DIP-199218E	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000005678|refseq:NP_014795.1|dip:DIP-61576N|ensemblfungi:YOR152C(gene)|ensemblfungi:YOR152C_mRNA(transcript)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0032541"(cortical endoplasmic reticulum)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0061709"(reticulophagy)|rcsb pdb:7BRN	sgd:S000000174|refseq:NP_009475.1|dip:DIP-1197N|mint:P38182|ensemblfungi:YBL078C(gene)|ensemblfungi:YBL078C_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0008429"(phosphatidylethanolamine binding)|go:"GO:0016236"(macroautophagy)|go:"GO:0016241"(regulation of macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0031386"(protein tag)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0033110"(Cvt vesicle membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0034629"|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0044805"(late nucleophagy)|go:"GO:0061025"(membrane fusion)|go:"GO:0061709"(reticulophagy)|go:"GO:0071211"(protein targeting to vacuole involved in autophagy)|go:"GO:0120095"(vacuole-isolation membrane contact site)|go:"GO:1905153"(regulation of membrane invagination)|interpro:IPR004241("Light chain 3 (LC3)")|interpro:IPR029071|rcsb pdb:2KQ7|rcsb pdb:2KWC|rcsb pdb:2LI5|rcsb pdb:2ZPN|rcsb pdb:3RUI|rcsb pdb:3VH3|rcsb pdb:3VH4|rcsb pdb:3VXW|rcsb pdb:5YEC|rcsb pdb:6AAG|rcsb pdb:6WY6|rcsb pdb:7BRN|reactome:R-SCE-1632852|reactome:R-SCE-8854214|reactome:R-SCE-8934903	psi-mi:"MI:0465"(dip)	crc64:FD4951C817E2AD0F	crc64:1246CEFF5A038819	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2017/08/08	2017/08/10	rogid:iq3f8d2kcGe15PAwXwFtpWYvNdE559292	rogid:UlmpBW3JgdYFHLkZCQeJeb7DpK4559292	rigid:0/Cgme9Ul4y9sHuzeysRrSRiUZQ	false	ha tag:c-c	green fluorescent protein tag:c-c|mutation disrupting interaction strength:67-67,52-52	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q12527	uniprotkb:Q06159	intact:EBI-31977|uniprotkb:D6W457|ensemblfungi:YPR049C	intact:EBI-33888|uniprotkb:D6VYV5|ensemblfungi:YLR312C	psi-mi:atg11_yeast(display_long)|uniprotkb:Cytoplasm to vacuole targeting protein 9(gene name synonym)|uniprotkb:ATG11(gene name)|psi-mi:ATG11(display_short)|uniprotkb:CVT9(gene name synonym)|uniprotkb:YPR049C(locus name)|uniprotkb:YP9499.07c(orf name)	psi-mi:atg39_yeast(display_long)|uniprotkb:ATG39(gene name)|psi-mi:ATG39(display_short)|uniprotkb:YLR312C(locus name)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Mochida et al. (2015)	pubmed:26040717|doi:10.1038/nature14506|imex:IM-24569	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0465"(DIP)	intact:EBI-16158932|imex:IM-24569-8|dip:DIP-199219E	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015374.1|sgd:S000006253|dip:DIP-1492N|mint:Q12527|ensemblfungi:YPR049C(gene)|ensemblfungi:YPR049C_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000149"(SNARE binding)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0006914"(autophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0034629"|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0061709"(reticulophagy)|go:"GO:0140255"(regulation of cellular response to phosphate starvation)|go:"GO:1990316"(Atg1/ULK1 kinase complex)|go:"GO:2000786"(positive regulation of autophagosome assembly)|interpro:IPR019460|interpro:IPR040040|rcsb pdb:6VZF|reactome:R-SCE-1632852	sgd:S000004303|refseq:NP_013415.1|mint:Q06159|dip:DIP-1453N|ensemblfungi:YLR312C(gene)|ensemblfungi:YLR312C_mRNA(transcript)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0061709"(reticulophagy)|go:"GO:0097038"(perinuclear endoplasmic reticulum)	psi-mi:"MI:0465"(dip)	crc64:A904B92E9AE79449	crc64:0592D785516D9F90	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2017/08/08	2017/08/10	rogid:26PElwvrl3YKwoQU7YdkmR0ln3o559292	rogid:Q5U8fE6sOBBkY7yOTORPUtLa+cw559292	rigid:U8jRLwGyZueAIE3MPOa2dVseUSk	false	-	mutation disrupting interaction strength:59-59,58-58,57-57,56-56,55-55,54-54,53-53,52-52|green fluorescent protein tag:c-c	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q12527	uniprotkb:Q06159	intact:EBI-31977|uniprotkb:D6W457|ensemblfungi:YPR049C	intact:EBI-33888|uniprotkb:D6VYV5|ensemblfungi:YLR312C	psi-mi:atg11_yeast(display_long)|uniprotkb:Cytoplasm to vacuole targeting protein 9(gene name synonym)|uniprotkb:ATG11(gene name)|psi-mi:ATG11(display_short)|uniprotkb:CVT9(gene name synonym)|uniprotkb:YPR049C(locus name)|uniprotkb:YP9499.07c(orf name)	psi-mi:atg39_yeast(display_long)|uniprotkb:ATG39(gene name)|psi-mi:ATG39(display_short)|uniprotkb:YLR312C(locus name)	psi-mi:"MI:0018"(two hybrid)	Mochida et al. (2015)	pubmed:26040717|doi:10.1038/nature14506|imex:IM-24569	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0465"(DIP)	intact:EBI-16158915|imex:IM-24569-7|dip:DIP-199219E	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015374.1|sgd:S000006253|dip:DIP-1492N|mint:Q12527|ensemblfungi:YPR049C(gene)|ensemblfungi:YPR049C_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000149"(SNARE binding)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0006914"(autophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0034629"|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0061709"(reticulophagy)|go:"GO:0140255"(regulation of cellular response to phosphate starvation)|go:"GO:1990316"(Atg1/ULK1 kinase complex)|go:"GO:2000786"(positive regulation of autophagosome assembly)|interpro:IPR019460|interpro:IPR040040|rcsb pdb:6VZF|reactome:R-SCE-1632852	sgd:S000004303|refseq:NP_013415.1|mint:Q06159|dip:DIP-1453N|ensemblfungi:YLR312C(gene)|ensemblfungi:YLR312C_mRNA(transcript)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0061709"(reticulophagy)|go:"GO:0097038"(perinuclear endoplasmic reticulum)	psi-mi:"MI:0465"(dip)	crc64:A904B92E9AE79449	crc64:0592D785516D9F90	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2017/08/08	2017/08/10	rogid:26PElwvrl3YKwoQU7YdkmR0ln3o559292	rogid:Q5U8fE6sOBBkY7yOTORPUtLa+cw559292	rigid:U8jRLwGyZueAIE3MPOa2dVseUSk	false	-	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q99325	uniprotkb:P38182	intact:EBI-3681992|uniprotkb:D6W2K9|ensemblfungi:YOR152C	intact:EBI-2684|uniprotkb:D6VPS5|ensemblfungi:YBL078C	psi-mi:atg40_yeast(display_long)|uniprotkb:ATG40(gene name)|psi-mi:ATG40(display_short)|uniprotkb:O3536(orf name)|uniprotkb:YOR152C(locus name)	psi-mi:atg8_yeast(display_long)|uniprotkb:ATG8(gene name)|psi-mi:ATG8(display_short)|uniprotkb:APG8(gene name synonym)|uniprotkb:AUT7(gene name synonym)|uniprotkb:YBL078C(locus name)|uniprotkb:YBL0732(orf name)|uniprotkb:CVT5(gene name synonym)|uniprotkb:Autophagy-related ubiquitin-like modifier ATG8(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 5(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Mochida et al. (2015)	pubmed:26040717|doi:10.1038/nature14506|imex:IM-24569	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0465"(DIP)	intact:EBI-16158890|imex:IM-24569-6|dip:DIP-199218E	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000005678|refseq:NP_014795.1|dip:DIP-61576N|ensemblfungi:YOR152C(gene)|ensemblfungi:YOR152C_mRNA(transcript)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0032541"(cortical endoplasmic reticulum)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0061709"(reticulophagy)|rcsb pdb:7BRN	sgd:S000000174|refseq:NP_009475.1|dip:DIP-1197N|mint:P38182|ensemblfungi:YBL078C(gene)|ensemblfungi:YBL078C_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0008429"(phosphatidylethanolamine binding)|go:"GO:0016236"(macroautophagy)|go:"GO:0016241"(regulation of macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0031386"(protein tag)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0033110"(Cvt vesicle membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0034629"|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0044805"(late nucleophagy)|go:"GO:0061025"(membrane fusion)|go:"GO:0061709"(reticulophagy)|go:"GO:0071211"(protein targeting to vacuole involved in autophagy)|go:"GO:0120095"(vacuole-isolation membrane contact site)|go:"GO:1905153"(regulation of membrane invagination)|interpro:IPR004241("Light chain 3 (LC3)")|interpro:IPR029071|rcsb pdb:2KQ7|rcsb pdb:2KWC|rcsb pdb:2LI5|rcsb pdb:2ZPN|rcsb pdb:3RUI|rcsb pdb:3VH3|rcsb pdb:3VH4|rcsb pdb:3VXW|rcsb pdb:5YEC|rcsb pdb:6AAG|rcsb pdb:6WY6|rcsb pdb:7BRN|reactome:R-SCE-1632852|reactome:R-SCE-8854214|reactome:R-SCE-8934903	psi-mi:"MI:0465"(dip)	crc64:FD4951C817E2AD0F	crc64:1246CEFF5A038819	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2017/08/08	2017/08/10	rogid:iq3f8d2kcGe15PAwXwFtpWYvNdE559292	rogid:UlmpBW3JgdYFHLkZCQeJeb7DpK4559292	rigid:0/Cgme9Ul4y9sHuzeysRrSRiUZQ	false	ha tag:c-c|mutation disrupting interaction strength:245-245,242-242	green fluorescent protein tag:c-c	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q06159	uniprotkb:P38182	intact:EBI-33888|uniprotkb:D6VYV5|ensemblfungi:YLR312C	intact:EBI-2684|uniprotkb:D6VPS5|ensemblfungi:YBL078C	psi-mi:atg39_yeast(display_long)|uniprotkb:ATG39(gene name)|psi-mi:ATG39(display_short)|uniprotkb:YLR312C(locus name)	psi-mi:atg8_yeast(display_long)|uniprotkb:ATG8(gene name)|psi-mi:ATG8(display_short)|uniprotkb:APG8(gene name synonym)|uniprotkb:AUT7(gene name synonym)|uniprotkb:YBL078C(locus name)|uniprotkb:YBL0732(orf name)|uniprotkb:CVT5(gene name synonym)|uniprotkb:Autophagy-related ubiquitin-like modifier ATG8(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 5(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Mochida et al. (2015)	pubmed:26040717|doi:10.1038/nature14506|imex:IM-24569	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0465"(DIP)	intact:EBI-16158961|imex:IM-24569-9|dip:DIP-199217E	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004303|refseq:NP_013415.1|mint:Q06159|dip:DIP-1453N|ensemblfungi:YLR312C(gene)|ensemblfungi:YLR312C_mRNA(transcript)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0061709"(reticulophagy)|go:"GO:0097038"(perinuclear endoplasmic reticulum)	sgd:S000000174|refseq:NP_009475.1|dip:DIP-1197N|mint:P38182|ensemblfungi:YBL078C(gene)|ensemblfungi:YBL078C_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0008429"(phosphatidylethanolamine binding)|go:"GO:0016236"(macroautophagy)|go:"GO:0016241"(regulation of macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0031386"(protein tag)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0033110"(Cvt vesicle membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0034629"|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0044805"(late nucleophagy)|go:"GO:0061025"(membrane fusion)|go:"GO:0061709"(reticulophagy)|go:"GO:0071211"(protein targeting to vacuole involved in autophagy)|go:"GO:0120095"(vacuole-isolation membrane contact site)|go:"GO:1905153"(regulation of membrane invagination)|interpro:IPR004241("Light chain 3 (LC3)")|interpro:IPR029071|rcsb pdb:2KQ7|rcsb pdb:2KWC|rcsb pdb:2LI5|rcsb pdb:2ZPN|rcsb pdb:3RUI|rcsb pdb:3VH3|rcsb pdb:3VH4|rcsb pdb:3VXW|rcsb pdb:5YEC|rcsb pdb:6AAG|rcsb pdb:6WY6|rcsb pdb:7BRN|reactome:R-SCE-1632852|reactome:R-SCE-8854214|reactome:R-SCE-8934903	psi-mi:"MI:0465"(dip)	crc64:0592D785516D9F90	crc64:1246CEFF5A038819	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2017/08/08	2017/08/10	rogid:Q5U8fE6sOBBkY7yOTORPUtLa+cw559292	rogid:UlmpBW3JgdYFHLkZCQeJeb7DpK4559292	rigid:27YmXMnI/kyAzFCjDZT+J1Lz8JM	false	ha tag:c-c	green fluorescent protein tag:c-c|mutation decreasing interaction strength:67-67,52-52	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)