#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q8R326 uniprotkb:O88609 intact:EBI-309927|uniprotkb:Q3TUK2|uniprotkb:Q9CYH1|uniprotkb:Q9D0M8|ensembl:ENSMUSP00000022507 intact:EBI-13951208|uniprotkb:Q0VEN6 psi-mi:pspc1_mouse(display_long)|uniprotkb:Pspc1(gene name)|psi-mi:Pspc1(display_short)|uniprotkb:Psp1(gene name synonym)|uniprotkb:Paraspeckle protein 1(gene name synonym) psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:"MI:0096"(pull down) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951247|imex:IM-25687-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_079958.3|ensembl:ENSMUSG00000021938(gene)|ensembl:ENSMUST00000022507(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001650"(fibrillar center)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0045087"(innate immune response)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0048511"(rhythmic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034522|interpro:IPR034523|interpro:IPR035979|mint:Q8R326 go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) - - - figure legend:Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/03/29 rogid:ytx7HwtwAo7SxG0MsNz1YR1dKiQ10090 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rigid:mTdwPDdHjq33GzNyBFjJTDwNSgg false - myc tag:c-c|his tag:c-c - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VIJ6 uniprotkb:Q8R326 intact:EBI-6094576|uniprotkb:A2A7U6|uniprotkb:Q9ERW2|ensembl:ENSMUSP00000030623 intact:EBI-309927|uniprotkb:Q3TUK2|uniprotkb:Q9CYH1|uniprotkb:Q9D0M8|ensembl:ENSMUSP00000022507 psi-mi:sfpq_mouse(display_long)|uniprotkb:Sfpq(gene name)|psi-mi:Sfpq(display_short)|uniprotkb:DNA-binding p52/p100 complex, 100 kDa subunit(gene name synonym)|uniprotkb:Polypyrimidine tract-binding protein-associated-splicing factor(gene name synonym)|uniprotkb:Psf(gene name synonym) psi-mi:pspc1_mouse(display_long)|uniprotkb:Pspc1(gene name)|psi-mi:Pspc1(display_short)|uniprotkb:Psp1(gene name synonym)|uniprotkb:Paraspeckle protein 1(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951276|imex:IM-25687-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076092.1|ensembl:ENSMUSG00000028820(gene)|ensembl:ENSMUST00000030623(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000380"(alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0032839"(dendrite cytoplasm)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042754"(negative regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0045087"(innate immune response)|go:"GO:0045876"(positive regulation of sister chromatid cohesion)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048511"(rhythmic process)|go:"GO:0051276"(chromosome organization)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0070932"(histone H3 deacetylation)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:0098963"(dendritic transport of messenger ribonucleoprotein complex)|go:"GO:1902177"(positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034525|interpro:IPR034526|interpro:IPR035979|mint:Q8VIJ6|reactome:R-MMU-8849468 refseq:NP_079958.3|ensembl:ENSMUSG00000021938(gene)|ensembl:ENSMUST00000022507(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001650"(fibrillar center)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0045087"(innate immune response)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0048511"(rhythmic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034522|interpro:IPR034523|interpro:IPR035979|mint:Q8R326 - - - figure legend:4A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-embryonic_brain)|taxid:10090(Mouse embryonic brain) - 2017/03/20 2017/03/20 rogid:9mciNgfKrEvyAv7kjs55FHlUtRY10090 rogid:ytx7HwtwAo7SxG0MsNz1YR1dKiQ10090 rigid:B6Usu8bTinPb2xE0FrUeqPYeVcc false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:O88609 uniprotkb:Q8VIJ6 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-6094576|uniprotkb:A2A7U6|uniprotkb:Q9ERW2|ensembl:ENSMUSP00000030623 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:sfpq_mouse(display_long)|uniprotkb:Sfpq(gene name)|psi-mi:Sfpq(display_short)|uniprotkb:DNA-binding p52/p100 complex, 100 kDa subunit(gene name synonym)|uniprotkb:Polypyrimidine tract-binding protein-associated-splicing factor(gene name synonym)|uniprotkb:Psf(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951350|imex:IM-25687-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) refseq:NP_076092.1|ensembl:ENSMUSG00000028820(gene)|ensembl:ENSMUST00000030623(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000380"(alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0032839"(dendrite cytoplasm)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042754"(negative regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0045087"(innate immune response)|go:"GO:0045876"(positive regulation of sister chromatid cohesion)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048511"(rhythmic process)|go:"GO:0051276"(chromosome organization)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0070932"(histone H3 deacetylation)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:0098963"(dendritic transport of messenger ribonucleoprotein complex)|go:"GO:1902177"(positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034525|interpro:IPR034526|interpro:IPR035979|mint:Q8VIJ6|reactome:R-MMU-8849468 - - - figure legend:4D, 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-embryonic_brain)|taxid:10090(Mouse embryonic brain) - 2017/03/20 2017/03/20 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:9mciNgfKrEvyAv7kjs55FHlUtRY10090 rigid:ZjcJC/ti3+sjNWZ1yBG2JZ2oyK0 false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q8VIJ6 uniprotkb:Q8R326 intact:EBI-6094576|uniprotkb:A2A7U6|uniprotkb:Q9ERW2|ensembl:ENSMUSP00000030623 intact:EBI-309927|uniprotkb:Q3TUK2|uniprotkb:Q9CYH1|uniprotkb:Q9D0M8|ensembl:ENSMUSP00000022507 psi-mi:sfpq_mouse(display_long)|uniprotkb:Sfpq(gene name)|psi-mi:Sfpq(display_short)|uniprotkb:DNA-binding p52/p100 complex, 100 kDa subunit(gene name synonym)|uniprotkb:Polypyrimidine tract-binding protein-associated-splicing factor(gene name synonym)|uniprotkb:Psf(gene name synonym) psi-mi:pspc1_mouse(display_long)|uniprotkb:Pspc1(gene name)|psi-mi:Pspc1(display_short)|uniprotkb:Psp1(gene name synonym)|uniprotkb:Paraspeckle protein 1(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951289|imex:IM-25687-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076092.1|ensembl:ENSMUSG00000028820(gene)|ensembl:ENSMUST00000030623(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000380"(alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0032839"(dendrite cytoplasm)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042754"(negative regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0045087"(innate immune response)|go:"GO:0045876"(positive regulation of sister chromatid cohesion)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048511"(rhythmic process)|go:"GO:0051276"(chromosome organization)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0070932"(histone H3 deacetylation)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:0098963"(dendritic transport of messenger ribonucleoprotein complex)|go:"GO:1902177"(positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034525|interpro:IPR034526|interpro:IPR035979|mint:Q8VIJ6|reactome:R-MMU-8849468 refseq:NP_079958.3|ensembl:ENSMUSG00000021938(gene)|ensembl:ENSMUST00000022507(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001650"(fibrillar center)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0045087"(innate immune response)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0048511"(rhythmic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034522|interpro:IPR034523|interpro:IPR035979|mint:Q8R326 - - - figure legend:4B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/03/20 rogid:9mciNgfKrEvyAv7kjs55FHlUtRY10090 rogid:ytx7HwtwAo7SxG0MsNz1YR1dKiQ10090 rigid:B6Usu8bTinPb2xE0FrUeqPYeVcc false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:O88609 uniprotkb:Q8VIJ6 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-6094576|uniprotkb:A2A7U6|uniprotkb:Q9ERW2|ensembl:ENSMUSP00000030623 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:sfpq_mouse(display_long)|uniprotkb:Sfpq(gene name)|psi-mi:Sfpq(display_short)|uniprotkb:DNA-binding p52/p100 complex, 100 kDa subunit(gene name synonym)|uniprotkb:Polypyrimidine tract-binding protein-associated-splicing factor(gene name synonym)|uniprotkb:Psf(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951313|imex:IM-25687-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) refseq:NP_076092.1|ensembl:ENSMUSG00000028820(gene)|ensembl:ENSMUST00000030623(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000380"(alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0032839"(dendrite cytoplasm)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042754"(negative regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0045087"(innate immune response)|go:"GO:0045876"(positive regulation of sister chromatid cohesion)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048511"(rhythmic process)|go:"GO:0051276"(chromosome organization)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0070932"(histone H3 deacetylation)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:0098963"(dendritic transport of messenger ribonucleoprotein complex)|go:"GO:1902177"(positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034525|interpro:IPR034526|interpro:IPR035979|mint:Q8VIJ6|reactome:R-MMU-8849468 - - - figure legend:4B, C, E, 5A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/03/20 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:9mciNgfKrEvyAv7kjs55FHlUtRY10090 rigid:ZjcJC/ti3+sjNWZ1yBG2JZ2oyK0 false his tag:c-c - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q8VIJ6 uniprotkb:Q06219 intact:EBI-6094576|uniprotkb:A2A7U6|uniprotkb:Q9ERW2|ensembl:ENSMUSP00000030623 intact:EBI-2337255|uniprotkb:O08690|ensembl:ENSMUSP00000028166|ensembl:ENSMUSP00000108248 psi-mi:sfpq_mouse(display_long)|uniprotkb:Sfpq(gene name)|psi-mi:Sfpq(display_short)|uniprotkb:DNA-binding p52/p100 complex, 100 kDa subunit(gene name synonym)|uniprotkb:Polypyrimidine tract-binding protein-associated-splicing factor(gene name synonym)|uniprotkb:Psf(gene name synonym) psi-mi:nr4a2_mouse(display_long)|uniprotkb:Nr4a2(gene name)|psi-mi:Nr4a2(display_short)|uniprotkb:Nurr1(gene name synonym)|uniprotkb:Orphan nuclear receptor NURR1(gene name synonym)|uniprotkb:NUR-related factor 1(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951354|imex:IM-25687-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076092.1|ensembl:ENSMUSG00000028820(gene)|ensembl:ENSMUST00000030623(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000380"(alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0032839"(dendrite cytoplasm)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042754"(negative regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0045087"(innate immune response)|go:"GO:0045876"(positive regulation of sister chromatid cohesion)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048511"(rhythmic process)|go:"GO:0051276"(chromosome organization)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0070932"(histone H3 deacetylation)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:0098963"(dendritic transport of messenger ribonucleoprotein complex)|go:"GO:1902177"(positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034525|interpro:IPR034526|interpro:IPR035979|mint:Q8VIJ6|reactome:R-MMU-8849468 refseq:XP_011237335.1|refseq:XP_011237336.1|refseq:NP_001132981.1|refseq:NP_038641.1|ensembl:ENSMUSG00000026826(gene)|ensembl:ENSMUST00000028166(transcript)|ensembl:ENSMUST00000112629(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001666"(response to hypoxia)|go:"GO:0001764"(neuron migration)|go:"GO:0001975"(response to amphetamine)|go:"GO:0003677"(DNA binding)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007399"(nervous system development)|go:"GO:0007611"(learning or memory)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008344"(adult locomotory behavior)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010035"(response to inorganic substance)|go:"GO:0010467"(gene expression)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0016607"(nuclear speck)|go:"GO:0017085"(response to insecticide)|go:"GO:0021952"(central nervous system projection neuron axonogenesis)|go:"GO:0021953"(central nervous system neuron differentiation)|go:"GO:0021986"(habenula development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0031668"(cellular response to extracellular stimulus)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0035259"(glucocorticoid receptor binding)|go:"GO:0042053"(regulation of dopamine metabolic process)|go:"GO:0042416"(dopamine biosynthetic process)|go:"GO:0042417"(dopamine metabolic process)|go:"GO:0042551"(neuron maturation)|go:"GO:0043085"(positive regulation of catalytic activity)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0043576"(regulation of respiratory gaseous exchange)|go:"GO:0045444"(fat cell differentiation)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051866"(general adaptation syndrome)|go:"GO:0071376"(cellular response to corticotropin-releasing hormone stimulus)|go:"GO:0071542"(dopaminergic neuron differentiation)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:2001234"(negative regulation of apoptotic signaling pathway)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR003070(Orphan nuclear receptor)|interpro:IPR003073(Orphan nuclear receptor, NURR type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|reactome:R-MMU-383280 - - - figure legend:4E|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/03/20 rogid:9mciNgfKrEvyAv7kjs55FHlUtRY10090 rogid:CK0Kua7DlmmUoBPZe0SdkqHeg9s10090 rigid:jwTnFqz78+gpUfVravnEjbrrDr4 false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:O88609 uniprotkb:Q8VIJ6 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-6094576|uniprotkb:A2A7U6|uniprotkb:Q9ERW2|ensembl:ENSMUSP00000030623 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:sfpq_mouse(display_long)|uniprotkb:Sfpq(gene name)|psi-mi:Sfpq(display_short)|uniprotkb:DNA-binding p52/p100 complex, 100 kDa subunit(gene name synonym)|uniprotkb:Polypyrimidine tract-binding protein-associated-splicing factor(gene name synonym)|uniprotkb:Psf(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951300|imex:IM-25687-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) refseq:NP_076092.1|ensembl:ENSMUSG00000028820(gene)|ensembl:ENSMUST00000030623(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000380"(alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0032839"(dendrite cytoplasm)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042754"(negative regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0045087"(innate immune response)|go:"GO:0045876"(positive regulation of sister chromatid cohesion)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048511"(rhythmic process)|go:"GO:0051276"(chromosome organization)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0070932"(histone H3 deacetylation)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:0098963"(dendritic transport of messenger ribonucleoprotein complex)|go:"GO:1902177"(positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034525|interpro:IPR034526|interpro:IPR035979|mint:Q8VIJ6|reactome:R-MMU-8849468 - - - figure legend:4B, C, E, 5A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/03/20 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:9mciNgfKrEvyAv7kjs55FHlUtRY10090 rigid:ZjcJC/ti3+sjNWZ1yBG2JZ2oyK0 false his tag:c-c - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:O88609 uniprotkb:Q8VIJ6 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-6094576|uniprotkb:A2A7U6|uniprotkb:Q9ERW2|ensembl:ENSMUSP00000030623 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:sfpq_mouse(display_long)|uniprotkb:Sfpq(gene name)|psi-mi:Sfpq(display_short)|uniprotkb:DNA-binding p52/p100 complex, 100 kDa subunit(gene name synonym)|uniprotkb:Polypyrimidine tract-binding protein-associated-splicing factor(gene name synonym)|uniprotkb:Psf(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951359|imex:IM-25687-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) refseq:NP_076092.1|ensembl:ENSMUSG00000028820(gene)|ensembl:ENSMUST00000030623(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000380"(alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0032839"(dendrite cytoplasm)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042754"(negative regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0045087"(innate immune response)|go:"GO:0045876"(positive regulation of sister chromatid cohesion)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048511"(rhythmic process)|go:"GO:0051276"(chromosome organization)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0070932"(histone H3 deacetylation)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:0098963"(dendritic transport of messenger ribonucleoprotein complex)|go:"GO:1902177"(positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034525|interpro:IPR034526|interpro:IPR035979|mint:Q8VIJ6|reactome:R-MMU-8849468 - - - figure legend:5A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/03/29 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:9mciNgfKrEvyAv7kjs55FHlUtRY10090 rigid:8nPOgBlxoH+c5fOeBrswlogWnGk false his tag:c-c - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:O88609 uniprotkb:Q8R326 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-309927|uniprotkb:Q3TUK2|uniprotkb:Q9CYH1|uniprotkb:Q9D0M8|ensembl:ENSMUSP00000022507 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:pspc1_mouse(display_long)|uniprotkb:Pspc1(gene name)|psi-mi:Pspc1(display_short)|uniprotkb:Psp1(gene name synonym)|uniprotkb:Paraspeckle protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951359|imex:IM-25687-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) refseq:NP_079958.3|ensembl:ENSMUSG00000021938(gene)|ensembl:ENSMUST00000022507(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001650"(fibrillar center)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0045087"(innate immune response)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0048511"(rhythmic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034522|interpro:IPR034523|interpro:IPR035979|mint:Q8R326 - - - figure legend:5A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/03/29 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:ytx7HwtwAo7SxG0MsNz1YR1dKiQ10090 rigid:8nPOgBlxoH+c5fOeBrswlogWnGk false his tag:c-c - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:O88609 uniprotkb:Q8VIJ6 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-6094576|uniprotkb:A2A7U6|uniprotkb:Q9ERW2|ensembl:ENSMUSP00000030623 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:sfpq_mouse(display_long)|uniprotkb:Sfpq(gene name)|psi-mi:Sfpq(display_short)|uniprotkb:DNA-binding p52/p100 complex, 100 kDa subunit(gene name synonym)|uniprotkb:Polypyrimidine tract-binding protein-associated-splicing factor(gene name synonym)|uniprotkb:Psf(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951343|imex:IM-25687-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) refseq:NP_076092.1|ensembl:ENSMUSG00000028820(gene)|ensembl:ENSMUST00000030623(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000380"(alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0032839"(dendrite cytoplasm)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042754"(negative regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0045087"(innate immune response)|go:"GO:0045876"(positive regulation of sister chromatid cohesion)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048511"(rhythmic process)|go:"GO:0051276"(chromosome organization)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0070932"(histone H3 deacetylation)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:0098963"(dendritic transport of messenger ribonucleoprotein complex)|go:"GO:1902177"(positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034525|interpro:IPR034526|interpro:IPR035979|mint:Q8VIJ6|reactome:R-MMU-8849468 - - - figure legend:4C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/03/20 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:9mciNgfKrEvyAv7kjs55FHlUtRY10090 rigid:ZjcJC/ti3+sjNWZ1yBG2JZ2oyK0 false his tag:c-c - - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q8R326 uniprotkb:O88609 intact:EBI-309927|uniprotkb:Q3TUK2|uniprotkb:Q9CYH1|uniprotkb:Q9D0M8|ensembl:ENSMUSP00000022507 intact:EBI-13951208|uniprotkb:Q0VEN6 psi-mi:pspc1_mouse(display_long)|uniprotkb:Pspc1(gene name)|psi-mi:Pspc1(display_short)|uniprotkb:Psp1(gene name synonym)|uniprotkb:Paraspeckle protein 1(gene name synonym) psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951367|imex:IM-25687-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_079958.3|ensembl:ENSMUSG00000021938(gene)|ensembl:ENSMUST00000022507(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001650"(fibrillar center)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0045087"(innate immune response)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0048511"(rhythmic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034522|interpro:IPR034523|interpro:IPR035979|mint:Q8R326 go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) - - - figure legend:5A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/03/20 rogid:ytx7HwtwAo7SxG0MsNz1YR1dKiQ10090 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rigid:mTdwPDdHjq33GzNyBFjJTDwNSgg false - his tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:O88609 uniprotkb:Q78DX7 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-7800362|ensembl:ENSMUSP00000020045|intact:MINT-192643|uniprotkb:Q60705 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:ros1_mouse(display_long)|uniprotkb:Ros1(gene name)|psi-mi:Ros1(display_short)|uniprotkb:Ros-1(gene name synonym)|uniprotkb:Proto-oncogene c-Ros(gene name synonym)|uniprotkb:Proto-oncogene c-Ros-1(gene name synonym)|uniprotkb:Receptor tyrosine kinase c-ros oncogene 1(gene name synonym)|uniprotkb:Ros(gene name synonym)|uniprotkb:c-Ros receptor tyrosine kinase(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951426|imex:IM-25687-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) go:"GO:0038083"(peptidyl-tyrosine autophosphorylation)|go:"GO:0043235"(receptor complex)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0070372"(regulation of ERK1 and ERK2 cascade)|interpro:IPR000033(Low-density lipoprotein receptor, YWTD repeat)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001245(Tyrosine protein kinase)|interpro:IPR003961(Fibronectin, type III)|interpro:IPR008266(Tyrosine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011042(Six-bladed beta-propeller, TolB-like)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR020635|interpro:IPR036116|ensembl:ENSMUSG00000019893(gene)|ensembl:ENSMUST00000020045(transcript)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0002066"(columnar/cuboidal epithelial cell development)|go:"GO:0004713"(protein tyrosine kinase activity)|go:"GO:0004714"(transmembrane receptor protein tyrosine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0007169"(transmembrane receptor protein tyrosine kinase signaling pathway)|go:"GO:0007283"(spermatogenesis)|go:"GO:0009986"(cell surface)|go:"GO:0010467"(gene expression)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010966"(regulation of phosphate transport)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032006"(regulation of TOR signaling)|go:"GO:0033674"(positive regulation of kinase activity)|refseq:NP_035412.2 - - comment:mint|function:This is probably a cell growth or differentiation factor receptor with a tyrosine-protein kinase activity figure legend:6, Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:LzNQ4xzyD5LlrcgEF8QU/ZCuNTU10090 - false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:Q01063 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-7764239|ensembl:ENSMUSP00000113488|ensembl:ENSMUSP00000136485|uniprotkb:Q8CG05|uniprotkb:Q8C4Q7|intact:UNK-5385073|uniprotkb:B2KF58|uniprotkb:Q6TRH9 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:pde4d_mouse(display_long)|uniprotkb:Pde4d(gene name)|psi-mi:Pde4d(display_short)|uniprotkb:DPDE3(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951426|imex:IM-25687-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) ensembl:ENSMUSG00000021699(gene)|ensembl:ENSMUST00000122041(transcript)|ensembl:ENSMUST00000177907(transcript)|go:"GO:0002027"(regulation of heart rate)|go:"GO:0004114"(3',5'-cyclic-nucleotide phosphodiesterase activity)|go:"GO:0004115"(3',5'-cyclic-AMP phosphodiesterase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005891"(voltage-gated calcium channel complex)|go:"GO:0006198"(cAMP catabolic process)|go:"GO:0006939"(smooth muscle contraction)|go:"GO:0007165"(signal transduction)|go:"GO:0007568"(aging)|go:"GO:0010880"(regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0030593"(neutrophil chemotaxis)|go:"GO:0033137"(negative regulation of peptidyl-serine phosphorylation)|go:"GO:0034704"(calcium channel complex)|go:"GO:0034705"(potassium channel complex)|go:"GO:0035264"(multicellular organism growth)|go:"GO:0043951"(negative regulation of cAMP-mediated signaling)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045822"(negative regulation of heart contraction)|go:"GO:0046872"(metal ion binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0060314"(regulation of ryanodine-sensitive calcium-release channel activity)|go:"GO:0061028"(establishment of endothelial barrier)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071320"(cellular response to cAMP)|go:"GO:0071872"(cellular response to epinephrine stimulus)|go:"GO:0086004"(regulation of cardiac muscle cell contraction)|go:"GO:1901844"(regulation of cell communication by electrical coupling involved in cardiac conduction)|go:"GO:1901898"(negative regulation of relaxation of cardiac muscle)|interpro:IPR002073(3'5'-cyclic nucleotide phosphodiesterase)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR023088|interpro:IPR023174|interpro:IPR036971|interpro:IPR040844|mint:Q01063|reactome:R-MMU-180024|reactome:R-MMU-418555|go:"GO:0050900"(leukocyte migration)|refseq:NP_035186.1|refseq:XP_006517710.1|dip:DIP-29706N - - comment:mint|function:Regulates the levels of cAMP in the cell figure legend:6, Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:AccySsTfwmeaWakWyiGRFhqJ+4Y10090 - false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:A2A863 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-9630531|uniprotkb:A2A865|uniprotkb:A2A866|uniprotkb:Q6PCS0|uniprotkb:Q8R3J1|uniprotkb:Q91W15|ensembl:ENSMUSP00000102066|ensembl:ENSMUSP00000102069 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:itb4_mouse(display_long)|uniprotkb:Itgb4(gene name)|psi-mi:Itgb4(display_short) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951426|imex:IM-25687-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) refseq:XP_006532635.1|refseq:XP_006532636.1|refseq:XP_006532637.1|interpro:IPR033760|interpro:IPR036116|interpro:IPR036349|interpro:IPR036465|interpro:IPR038081|interpro:IPR040622|reactome:R-MMU-3000157|reactome:R-MMU-3000170|reactome:R-MMU-446107|go:"GO:0007160"(cell-matrix adhesion)|go:"GO:0007229"(integrin-mediated signaling pathway)|go:"GO:0008305"(integrin complex)|go:"GO:0009611"(response to wounding)|go:"GO:0009925"(basal plasma membrane)|go:"GO:0009986"(cell surface)|go:"GO:0016020"(membrane)|go:"GO:0016477"(cell migration)|go:"GO:0022011"(myelination in peripheral nervous system)|go:"GO:0030054"(cell junction)|go:"GO:0030056"(hemidesmosome)|go:"GO:0031252"(cell leading edge)|ensembl:ENSMUSG00000020758(gene)|ensembl:ENSMUST00000106458(transcript)|ensembl:ENSMUST00000106461(transcript)|go:"GO:0001664"(G protein-coupled receptor binding)|go:"GO:0005178"(integrin binding)|go:"GO:0005604"(basement membrane)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0005938"(cell cortex)|go:"GO:0006914"(autophagy)|go:"GO:0007155"(cell adhesion)|go:"GO:0031581"(hemidesmosome assembly)|go:"GO:0031965"(nuclear membrane)|go:"GO:0031994"(insulin-like growth factor I binding)|go:"GO:0032290"(peripheral nervous system myelin formation)|go:"GO:0033627"(cell adhesion mediated by integrin)|go:"GO:0035878"(nail development)|go:"GO:0038132"(neuregulin binding)|go:"GO:0043235"(receptor complex)|go:"GO:0043589"(skin morphogenesis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0048333"(mesodermal cell differentiation)|go:"GO:0048870"(cell motility)|go:"GO:0061450"(trophoblast cell migration)|interpro:IPR000742(EGF-like, type 3)|interpro:IPR002369(Integrin beta subunit, N-terminal)|interpro:IPR003644(Na-Ca exchanger/integrin-beta4)|interpro:IPR003961(Fibronectin, type III)|interpro:IPR012013(Integrin beta-4 subunit)|interpro:IPR012896(Integrin beta subunit, tail)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR015812(Integrin beta subunit) - - - figure legend:6, Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:L62yPZPfhU3Z/HQ4GfCawekWt9810090 - false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:Q08274 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-11600857|uniprotkb:E9QLY4|ensembl:ENSMUSP00000032570 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:dmwd_mouse(display_long)|uniprotkb:Dmwd(gene name)|psi-mi:Dmwd(display_short)|uniprotkb:Dm9(gene name synonym)|uniprotkb:Dystrophia myotonica-containing WD repeat motif protein(gene name synonym)|uniprotkb:Protein DMR-N9(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951426|imex:IM-25687-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) refseq:NP_034188.2|ensembl:ENSMUSG00000030410(gene)|ensembl:ENSMUST00000032570(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0030425"(dendrite)|go:"GO:0043204"(perikaryon)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322 - - - figure legend:6, Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:oDYTNV8PMHv0aJ6VQk2KjLFYzJU10090 - false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 intact:EBI-14029902 intact:EBI-13951208|uniprotkb:Q0VEN6 - psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:hspa1a_hspa1b_mouse(display_short)|psi-mi:EBI-14029902(display_long) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951426|imex:IM-25687-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:1304"(molecule set) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) - - - comment:Q61696,P17879 figure legend:6, Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 - - false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:Q99JY9 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-773994|uniprotkb:Q9DC56|ensembl:ENSMUSP00000027579|ensembl:ENSMUSP00000137503 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:arp3_mouse(display_long)|uniprotkb:Actin-like protein 3(gene name synonym)|uniprotkb:Actr3(gene name)|psi-mi:Actr3(display_short)|uniprotkb:Arp3(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951426|imex:IM-25687-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) refseq:NP_001192314.1|refseq:NP_001192315.1|refseq:NP_076224.1|ensembl:ENSMUSG00000026341(gene)|ensembl:ENSMUST00000027579(transcript)|ensembl:ENSMUST00000178474(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001726"(ruffle)|go:"GO:0002102"(podosome)|go:"GO:0003779"(actin binding)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005885"(Arp2/3 protein complex)|go:"GO:0005903"(brush border)|go:"GO:0005911"(cell-cell junction)|go:"GO:0007163"(establishment or maintenance of cell polarity)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010592"(positive regulation of lamellipodium assembly)|go:"GO:0010763"(positive regulation of fibroblast migration)|go:"GO:0016344"(meiotic chromosome movement towards spindle pole)|go:"GO:0030027"(lamellipodium)|go:"GO:0030056"(hemidesmosome)|go:"GO:0030517"(negative regulation of axon extension)|go:"GO:0030838"(positive regulation of actin filament polymerization)|go:"GO:0031252"(cell leading edge)|go:"GO:0032092"(positive regulation of protein binding)|go:"GO:0033206"(meiotic cytokinesis)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0035861"(site of double-strand break)|go:"GO:0043519"(regulation of myosin II filament organization)|go:"GO:0045666"(positive regulation of neuron differentiation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048708"(astrocyte differentiation)|go:"GO:0048711"(positive regulation of astrocyte differentiation)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0051015"(actin filament binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0051491"(positive regulation of filopodium assembly)|go:"GO:0051653"(spindle localization)|go:"GO:0051965"(positive regulation of synapse assembly)|go:"GO:0060076"(excitatory synapse)|go:"GO:0060271"(cilium assembly)|go:"GO:0061003"(positive regulation of dendritic spine morphogenesis)|go:"GO:0061825"(podosome core)|go:"GO:0061828"(apical tubulobulbar complex)|go:"GO:0061830"(concave side of sperm head)|go:"GO:0061831"(apical ectoplasmic specialization)|go:"GO:0061832"(basal ectoplasmic specialization)|go:"GO:0061851"(leading edge of lamellipodium)|go:"GO:0071346"(cellular response to interferon-gamma)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071560"(cellular response to transforming growth factor beta stimulus)|go:"GO:0090314"(positive regulation of protein targeting to membrane)|go:"GO:0098794"(postsynapse)|go:"GO:0098974"(postsynaptic actin cytoskeleton organization)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:1903078"(positive regulation of protein localization to plasma membrane)|go:"GO:1904171"(negative regulation of bleb assembly)|go:"GO:2000251"(positive regulation of actin cytoskeleton reorganization)|interpro:IPR004000(Actin/actin-like)|interpro:IPR015623(Actin-related protein 3)|interpro:IPR020902|interpro:IPR043129|mint:Q99JY9|rcsb pdb:7AQK|reactome:R-MMU-2029482|reactome:R-MMU-3928662|reactome:R-MMU-5663213|reactome:R-MMU-8856828 - - - figure legend:6, Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:FBCctn7WChHon0MhVlJUO4ctinE10090 - false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:P23475 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-822760|uniprotkb:Q3UJL8|uniprotkb:Q6GTV8|uniprotkb:Q8QZX7|uniprotkb:O88212|uniprotkb:Q62027|uniprotkb:Q62382|uniprotkb:Q62453 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:xrcc6_mouse(display_long)|uniprotkb:ATP-dependent DNA helicase II 70 kDa subunit(gene name synonym)|uniprotkb:Ku autoantigen protein p70 homolog(gene name synonym)|uniprotkb:CTC box-binding factor 75 kDa subunit(gene name synonym)|uniprotkb:DNA repair protein XRCC6(gene name synonym)|uniprotkb:Xrcc6(gene name)|psi-mi:Xrcc6(display_short)|uniprotkb:G22p1(gene name synonym)|uniprotkb:Ku70(gene name synonym)|uniprotkb:5'-deoxyribose-5-phosphate lyase Ku70(gene name synonym)|uniprotkb:ATP-dependent DNA helicase 2 subunit 1(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951426|imex:IM-25687-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) mint:P23475|refseq:NP_034377.2|interpro:IPR006164(DNA helicase, ATP-dependent, Ku type)|interpro:IPR006165(DNA helicase, ATP-dependent, Ku70 subunit)|interpro:IPR005160(Ku70/Ku80 C-terminal arm)|interpro:IPR005161(Ku70/Ku80, N-terminal alpha/beta)|interpro:IPR003034(DNA-binding SAP)|interpro:IPR016194(Spen Paralogue and Orthologue C-terminal-like)|refseq:XP_006520505.1|refseq:XP_006520506.1|refseq:XP_011243758.1|interpro:IPR027388|interpro:IPR036361|interpro:IPR036465|go:"GO:0000723"(telomere maintenance)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005694"(chromosome)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0010212"(response to ionizing radiation)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030332"(cyclin binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0032993"(protein-DNA complex)|go:"GO:0033151"("V(D)J recombination")|go:"GO:0042162"(telomeric DNA binding)|go:"GO:0043564"("Ku70:Ku80 complex")|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045087"(innate immune response)|go:"GO:0045621"(positive regulation of lymphocyte differentiation)|go:"GO:0045860"(positive regulation of protein kinase activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048660"(regulation of smooth muscle cell proliferation)|go:"GO:0050769"(positive regulation of neurogenesis)|go:"GO:0051575"(5'-deoxyribose-5-phosphate lyase activity)|go:"GO:0070419"(nonhomologous end joining complex)|go:"GO:0071475"(cellular hyperosmotic salinity response)|go:"GO:0071480"(cellular response to gamma radiation)|go:"GO:0071481"(cellular response to X-ray)|go:"GO:0097680"(double-strand break repair via classical nonhomologous end joining)|reactome:R-MMU-5693571|reactome:R-MMU-6798695 - - - figure legend:6, Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:/A6ygYkLE2FpziX/3fMu5IvG0iI10090 - false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:A2AKB4 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-13951429|ensembl:ENSMUSP00000047232|ensembl:ENSMUSP00000103434|uniprotkb:Q80TN2|uniprotkb:Q80XK5|uniprotkb:Q8K0C0 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:frpd1_mouse(display_long)|uniprotkb:Frmpd1(gene name)|psi-mi:Frmpd1(display_short)|uniprotkb:Kiaa0967(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951426|imex:IM-25687-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) ensembl:ENSMUSG00000035615(gene)|ensembl:ENSMUST00000044773(transcript)|ensembl:ENSMUST00000107804(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005938"(cell cortex)|go:"GO:0007165"(signal transduction)|go:"GO:0008277"(regulation of G protein-coupled receptor signaling pathway)|go:"GO:0032991"(protein-containing complex)|go:"GO:0090150"(establishment of protein localization to membrane)|interpro:IPR000159(Ras-association)|interpro:IPR000299(Band 4.1, N-terminal)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR014352(FERM/acyl-CoA-binding protein, 3-helical bundle)|interpro:IPR019748|interpro:IPR019749|interpro:IPR029071|interpro:IPR035963|interpro:IPR036034|interpro:IPR041779|refseq:NP_001074641.1|refseq:XP_006538238.1|refseq:XP_006538239.1|refseq:XP_006538240.1|refseq:XP_006538241.1|refseq:XP_011248387.1 - - - figure legend:6, Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:Rqm+C42IjXBvruH7tAVn2I1SjXM10090 - false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:Q61029 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-6172136|ensembl:ENSMUSP00000072092|uniprotkb:Q3UCI5|uniprotkb:Q61030|uniprotkb:Q61031|uniprotkb:Q61032 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:lap2b_mouse(display_long)|uniprotkb:Tmpo(gene name)|psi-mi:Tmpo(display_short)|uniprotkb:Lap2(gene name synonym)|uniprotkb:Thymopoietin isoforms beta/delta/epsilon/gamma(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951426|imex:IM-25687-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) ensembl:ENSMUSG00000019961(gene)|ensembl:ENSMUST00000072239(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005637"(nuclear inner membrane)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031965"(nuclear membrane)|interpro:IPR003887(Lamino-associated polypeptide 2/emerin)|interpro:IPR011015(LEM-like fold)|interpro:IPR013146(Thymopoietin LEM)|mint:Q61029|refseq:NP_001073598.1|refseq:NP_001073600.1|refseq:NP_001073601.1 - - - figure legend:6, Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:Gjr5NZyUa8Moc4L8lJlRPq29mQE10090 - false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:Q9WTI7 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-777558|ensembl:ENSMUSP00000099563|uniprotkb:Q3TBQ4|uniprotkb:Q3U231|uniprotkb:Q5ND46|uniprotkb:Q5ND48|uniprotkb:Q5ND49|uniprotkb:Q9ERB6|uniprotkb:O08571|uniprotkb:O08834|uniprotkb:Q9QW54 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:myo1c_mouse(display_long)|uniprotkb:Myosin I beta(gene name synonym)|uniprotkb:Myo1c(gene name)|psi-mi:Myo1c(display_short) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951426|imex:IM-25687-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) ensembl:ENSMUSG00000017774(gene)|ensembl:ENSMUST00000102505(transcript)|go:"GO:0000146"(microfilament motor activity)|go:"GO:0003779"(actin binding)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005643"(nuclear pore)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005902"(microvillus)|go:"GO:0005903"(brush border)|go:"GO:0006605"(protein targeting)|go:"GO:0006612"(protein targeting to membrane)|go:"GO:0007015"(actin filament organization)|mint:Q9WTI7|rcsb pdb:4R8G|reactome:R-MMU-2029482|reactome:R-MMU-5250924|interpro:IPR036961|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009925"(basal plasma membrane)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0016459"(myosin complex)|go:"GO:0016604"(nuclear body)|go:"GO:0030050"(vesicle transport along actin filament)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030838"(positive regulation of actin filament polymerization)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031941"(filamentous actin)|go:"GO:0031982"(vesicle)|go:"GO:0032420"(stereocilium)|go:"GO:0032421"(stereocilium bundle)|go:"GO:0032587"(ruffle membrane)|go:"GO:0038089"(positive regulation of cell migration by vascular endothelial growth factor signaling pathway)|go:"GO:0045121"(membrane raft)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0051015"(actin filament binding)|go:"GO:0051028"(mRNA transport)|go:"GO:0060171"(stereocilium membrane)|go:"GO:0071346"(cellular response to interferon-gamma)|go:"GO:0090314"(positive regulation of protein targeting to membrane)|go:"GO:1900078"(positive regulation of cellular response to insulin stimulus)|go:"GO:1900748"(positive regulation of vascular endothelial growth factor signaling pathway)|go:"GO:2000810"(regulation of bicellular tight junction assembly)|interpro:IPR000048(IQ calmodulin-binding region)|interpro:IPR001609(Myosin head, motor region)|interpro:IPR010926(Myosin tail 2)|interpro:IPR027417|interpro:IPR036072|refseq:NP_001074243.1|refseq:NP_001074244.1|refseq:NP_032685.1|refseq:XP_006532492.1|dip:DIP-35498N - - - figure legend:6, Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:E25nufEJATQnH9pvQlkmAdEOAd810090 - false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 intact:EBI-14029902 intact:EBI-13951208|uniprotkb:Q0VEN6 - psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:hspa1a_hspa1b_mouse(display_short)|psi-mi:EBI-14029902(display_long) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951850|imex:IM-25687-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:1304"(molecule set) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) - - - comment:Q61696,P17879 figure legend:6, Table 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 - - false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:Q61029 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-6172136|ensembl:ENSMUSP00000072092|uniprotkb:Q3UCI5|uniprotkb:Q61030|uniprotkb:Q61031|uniprotkb:Q61032 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:lap2b_mouse(display_long)|uniprotkb:Tmpo(gene name)|psi-mi:Tmpo(display_short)|uniprotkb:Lap2(gene name synonym)|uniprotkb:Thymopoietin isoforms beta/delta/epsilon/gamma(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951850|imex:IM-25687-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) ensembl:ENSMUSG00000019961(gene)|ensembl:ENSMUST00000072239(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005637"(nuclear inner membrane)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031965"(nuclear membrane)|interpro:IPR003887(Lamino-associated polypeptide 2/emerin)|interpro:IPR011015(LEM-like fold)|interpro:IPR013146(Thymopoietin LEM)|mint:Q61029|refseq:NP_001073598.1|refseq:NP_001073600.1|refseq:NP_001073601.1 - - - figure legend:6, Table 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:Gjr5NZyUa8Moc4L8lJlRPq29mQE10090 - false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:O70133 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-2657677|uniprotkb:O35931|uniprotkb:O54703|uniprotkb:Q5FWY1|uniprotkb:Q6R5F7|uniprotkb:Q9CSA2 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:dhx9_mouse(display_long)|uniprotkb:Dhx9(gene name)|psi-mi:Dhx9(display_short)|uniprotkb:Ddx9(gene name synonym)|uniprotkb:Nuclear DNA helicase II(gene name synonym)|uniprotkb:DEAH box protein 9(gene name synonym)|uniprotkb:RNA helicase A(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951850|imex:IM-25687-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) refseq:NP_031868.2|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR014720(Double-stranded RNA-binding-like)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR007502(Helicase-associated region)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|go:"GO:0000380"(alternative mRNA splicing, via spliceosome)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001069"(regulatory region RNA binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0003727"(single-stranded RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005726"(perichromatin fibrils)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005844"(polysome)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006954"(inflammatory response)|go:"GO:0007623"(circadian rhythm)|go:"GO:0010501"(RNA secondary structure unwinding)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0016442"(RISC complex)|go:"GO:0016604"(nuclear body)|go:"GO:0017111"(nucleoside-triphosphatase activity)|go:"GO:0030423"(targeting of mRNA for destruction involved in RNA interference)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0032508"(DNA duplex unwinding)|go:"GO:0032727"(positive regulation of interferon-alpha production)|go:"GO:0032728"(positive regulation of interferon-beta production)|go:"GO:0032741"(positive regulation of interleukin-18 production)|go:"GO:0032755"(positive regulation of interleukin-6 production)|go:"GO:0032760"(positive regulation of tumor necrosis factor production)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033679"(3'-5' DNA/RNA helicase activity)|go:"GO:0034458"(3'-5' RNA helicase activity)|go:"GO:0034605"(cellular response to heat)|go:"GO:0034622"|go:"GO:0035197"(siRNA binding)|go:"GO:0035613"(RNA stem-loop binding)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0039695"(DNA-templated viral transcription)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0043138"(3'-5' DNA helicase activity)|go:"GO:0044806"(G-quadruplex DNA unwinding)|go:"GO:0045087"(innate immune response)|go:"GO:0045089"(positive regulation of innate immune response)|go:"GO:0045142"(triplex DNA binding)|go:"GO:0045739"(positive regulation of DNA repair)|go:"GO:0045740"(positive regulation of DNA replication)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046833"(positive regulation of RNA export from nucleus)|go:"GO:0046872"(metal ion binding)|go:"GO:0047429"(nucleoside-triphosphate diphosphatase activity)|go:"GO:0048146"(positive regulation of fibroblast proliferation)|go:"GO:0050434"(positive regulation of viral transcription)|go:"GO:0050684"(regulation of mRNA processing)|go:"GO:0050691"(regulation of defense response to virus by host)|go:"GO:0050729"(positive regulation of inflammatory response)|go:"GO:0051028"(mRNA transport)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0060760"(positive regulation of response to cytokine stimulus)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0070063"(RNA polymerase binding)|go:"GO:0070269"(pyroptosis)|go:"GO:0070578"(RISC-loading complex)|go:"GO:0070922"(small RNA loading onto RISC)|go:"GO:0070934"(CRD-mediated mRNA stabilization)|go:"GO:0070937"(CRD-mediated mRNA stability complex)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071360"(cellular response to exogenous dsRNA)|go:"GO:0097165"(nuclear stress granule)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1903608"(protein localization to cytoplasmic stress granule)|go:"GO:1904973"(positive regulation of viral translation)|go:"GO:1905172"(RISC complex binding)|go:"GO:1905538"(polysome binding)|go:"GO:1905698"(positive regulation of polysome binding)|go:"GO:1990518"(single-stranded 3'-5' DNA helicase activity)|go:"GO:1990825"(sequence-specific mRNA binding)|go:"GO:1990841"(promoter-specific chromatin binding)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000373"("positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity")|go:"GO:2000637"(positive regulation of gene silencing by miRNA)|go:"GO:2000765"(regulation of cytoplasmic translation)|go:"GO:2000767"(positive regulation of cytoplasmic translation)|rcsb pdb:1UIL|rcsb pdb:1WHQ|rcsb pdb:2RS6|rcsb pdb:2RS7|reactome:R-MMU-1810476|reactome:R-MMU-3134963|reactome:R-MMU-72163|interpro:IPR027417|mint:O70133|interpro:IPR044445|interpro:IPR044446|interpro:IPR044447 - - - figure legend:6, Table 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:8NHxvbw0StglewhGm3e7Pi/8oOg10090 - false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:Q62504 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-8399884|intact:MINT-4101967|uniprotkb:Q80TN9|uniprotkb:Q9QZW2|uniprotkb:Q99PS4 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:mint_mouse(display_long)|uniprotkb:Spen(gene name)|psi-mi:Spen(display_short)|uniprotkb:Kiaa0929(gene name synonym)|uniprotkb:Mint(gene name synonym)|uniprotkb:Sharp(gene name synonym)|uniprotkb:SPEN homolog(gene name synonym)|uniprotkb:SMART/HDAC1-associated repressor protein(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951518|imex:IM-25687-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) interpro:IPR016194(Spen Paralogue and Orthologue C-terminal-like)|refseq:NP_062737.2|interpro:IPR034172|interpro:IPR034173|interpro:IPR034174|interpro:IPR034175|interpro:IPR035979|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|mint:Q62504|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0007219"(Notch signaling pathway)|go:"GO:0017053"(transcription repressor complex)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0050769"(positive regulation of neurogenesis)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|reactome:R-MMU-9013422|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR010912(Spen paralogue and orthologue C-terminal, metazoa)|interpro:IPR012921(Spen paralogue and orthologue C-terminal) - - comment:mint|function:Essential corepressor protein, which probably regulates different key pathways such as the Notch pathway. Negative regulator of the Notch pathway via its interaction with RBPSUH, which prevents the association between NOTCH1 and RBPSUH, and therefore suppresses the transactivation activity of Notch signaling. Blocks the differentiation of precursor B-cells into marginal zone B-cells. Probably represses transcription via the recruitment of large complexes containing histone deacetylase proteins. May bind both to DNA and RNA figure legend:6, Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:rrMAxGMsDguPq4w+oVxrHB3LbVg10090 rigid:06051nMYCMcUC489wGpReDEOlG4 false his tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:Q91YM2 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-8320638|uniprotkb:Q3UGY1|intact:MINT-4096884|uniprotkb:Q69ZC4|ensembl:ENSMUSP00000075242|ensembl:ENSMUSP00000127379 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:rhg35_mouse(display_long)|uniprotkb:Grlf1(gene name synonym)|uniprotkb:Kiaa1722(gene name synonym)|uniprotkb:Arhgap35(gene name)|psi-mi:Arhgap35(display_short)|uniprotkb:Glucocorticoid receptor DNA-binding factor 1(gene name synonym)|uniprotkb:P190A(gene name synonym)|uniprotkb:p190ARHOGAP(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951518|imex:IM-25687-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) refseq:XP_011248814.1|refseq:NP_766327.3|refseq:XP_006539872.1|ensembl:ENSMUSG00000058230(gene)|ensembl:ENSMUST00000075845(transcript)|ensembl:ENSMUST00000171937(transcript)|go:"GO:0001843"(neural tube closure)|go:"GO:0003677"(DNA binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0007229"(integrin-mediated signaling pathway)|go:"GO:0007411"(axon guidance)|go:"GO:0007413"(axonal fasciculation)|go:"GO:0008064"(regulation of actin polymerization or depolymerization)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0016477"(cell migration)|go:"GO:0021955"(central nervous system neuron axonogenesis)|go:"GO:0030879"(mammary gland development)|go:"GO:0030900"(forebrain development)|go:"GO:0030950"(establishment or maintenance of actin cytoskeleton polarity)|go:"GO:0031668"(cellular response to extracellular stimulus)|go:"GO:0032794"(GTPase activating protein binding)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0035024"(negative regulation of Rho protein signal transduction)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043010"(camera-type eye development)|go:"GO:0043116"(negative regulation of vascular permeability)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0044319"(wound healing, spreading of cells)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045724"(positive regulation of cilium assembly)|go:"GO:0050770"(regulation of axonogenesis)|go:"GO:0097485"(neuron projection guidance)|interpro:IPR000198(RhoGAP)|interpro:IPR001806(Ras GTPase)|interpro:IPR002713(FF)|interpro:IPR008936(Rho GTPase activation protein)|interpro:IPR027417|interpro:IPR032835|interpro:IPR036517|interpro:IPR039006|interpro:IPR039007|mint:Q91YM2|reactome:R-MMU-416550|reactome:R-MMU-8849471|reactome:R-MMU-8980692|reactome:R-MMU-9013026|reactome:R-MMU-9013106|reactome:R-MMU-9013148|reactome:R-MMU-9013149|reactome:R-MMU-9013404|reactome:R-MMU-9013405|reactome:R-MMU-9013406|reactome:R-MMU-9013408|reactome:R-MMU-9013409|reactome:R-MMU-9013423|reactome:R-MMU-9696264|reactome:R-MMU-9696270|reactome:R-MMU-9696273 - - function:"Represses transcription of the glucocorticoid receptor by binding to the cis-acting regulatory sequence 5'-GAGAAAAGAAACTGGAGAAACTC-3'. May participate in the regulation of retinal development and degeneration. May transduce signals from p21-ras to the nucleus, acting via the ras GTPase-activating protein (GAP). May also act as a tumor suppressor"|comment:mint figure legend:6, Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:UAGwtzIn+9Sf3irxrFfVKtsQ9ys10090 rigid:06051nMYCMcUC489wGpReDEOlG4 false his tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:Q2LKV2 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-14029912|uniprotkb:Q2LK60 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:nl1b4_mouse(display_long)|uniprotkb:Nlrp1b(gene name)|psi-mi:Nlrp1b(display_short)|uniprotkb:Nalp1b(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951518|imex:IM-25687-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006919"(activation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0019899"(enzyme binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030163"(protein catabolic process)|go:"GO:0032731"(positive regulation of interleukin-1 beta production)|go:"GO:0051402"(neuron apoptotic process)|go:"GO:0051607"(defense response to virus)|go:"GO:0061702"(inflammasome complex)|go:"GO:0070269"(pyroptosis)|go:"GO:0072558"(NLRP1 inflammasome complex)|go:"GO:0097264"(self proteolysis)|go:"GO:0140374"(antiviral innate immune response)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1904784"(NLRP1 inflammasome complex assembly)|interpro:IPR025307|interpro:IPR007111(NACHT nucleoside triphosphatase)|interpro:IPR027417|interpro:IPR041075|interpro:IPR041267|interpro:IPR032675 - - - figure legend:6, Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:Bfh5Pbzd8wKREDT6UExycKVDj6M10090 rigid:06051nMYCMcUC489wGpReDEOlG4 false his tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:Q9D9R9 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-13951479 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:f186a_mouse(display_long)|uniprotkb:FAM186A(gene name)|psi-mi:FAM186A(display_short)|uniprotkb:Gm920(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951518|imex:IM-25687-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) refseq:NP_082456.1|interpro:IPR039332 - - - figure legend:6, Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:zngDpojec0EpfZ+Vsef0CN6EcAg10090 rigid:06051nMYCMcUC489wGpReDEOlG4 false his tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:Q3UFQ8 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-13951462|ensembl:ENSMUSP00000075587|uniprotkb:Q6KAP3 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:carl3_mouse(display_long)|uniprotkb:Carmil3(gene name)|psi-mi:Carmil3(display_short)|uniprotkb:Lrrc16b(gene name synonym)|uniprotkb:Capping protein regulator and myosin 1 linker protein 3(gene name synonym)|uniprotkb:Leucine-rich repeat-containing protein 16B(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951518|imex:IM-25687-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) ensembl:ENSMUSG00000022211(gene)|ensembl:ENSMUST00000076236(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR029766|interpro:IPR031943|interpro:IPR032675|interpro:IPR041245|mint:Q3UFQ8|refseq:NP_001019816.1 - - - figure legend:6, Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:gPESbxfNq/mOFgUYRM0Yw83jUYk10090 rigid:06051nMYCMcUC489wGpReDEOlG4 false his tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:Q8C9M2 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-2553334|uniprotkb:Q8CBK5|uniprotkb:Q8BQB1|uniprotkb:Q8BRD7|ensembl:ENSMUSP00000150207|ensembl:ENSMUSP00000159312 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:ccd15_mouse(display_long)|uniprotkb:Ccdc15(gene name)|psi-mi:Ccdc15(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951518|imex:IM-25687-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) ensembl:ENSMUSG00000034303(gene)|ensembl:ENSMUST00000213633(transcript)|ensembl:ENSMUST00000239439(transcript)|go:"GO:0005813"(centrosome)|interpro:IPR037693|refseq:NP_001074898.1|refseq:XP_006510404.1 - - - figure legend:6, Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:a5ymYG1uGegkStygCqph/na+XsY10090 rigid:06051nMYCMcUC489wGpReDEOlG4 false his tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O88609 uniprotkb:Q70KF4 intact:EBI-13951208|uniprotkb:Q0VEN6 intact:EBI-782290|uniprotkb:Q70X91|uniprotkb:Q9CV01|uniprotkb:Q9CV02|uniprotkb:Q9ER93|uniprotkb:Q9ER96 psi-mi:lmx1b_mouse(display_long)|uniprotkb:Lmx1b(gene name)|psi-mi:Lmx1b(display_short)|uniprotkb:LIM/homeobox protein 1.2(gene name synonym)|uniprotkb:LIM/homeobox protein LMX1B(gene name synonym) psi-mi:cmya5_mouse(display_long)|uniprotkb:Sr553(gene name synonym)|uniprotkb:Srfsd(gene name synonym)|uniprotkb:Tims(gene name synonym)|uniprotkb:Myospryn(gene name synonym)|uniprotkb:Heart and skeletal muscle-specific and sprouty domain-containing(gene name synonym)|uniprotkb:Stretch-responsive fibronectin protein type 3(gene name synonym)|uniprotkb:Stretch-response protein 553(gene name synonym)|uniprotkb:TRIM-like protein(gene name synonym)|uniprotkb:Cmya5(gene name)|psi-mi:Cmya5(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Hoekstra et al. (2012) pubmed:23308148|imex:IM-25687 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-13951518|imex:IM-25687-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0002930"(trabecular meshwork development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007613"(memory)|go:"GO:0007626"(locomotory behavior)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009953"(dorsal/ventral pattern formation)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0021587"(cerebellum morphogenesis)|refseq:NP_034855.2|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:0021954"(central nervous system neuron development)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0030326"(embryonic limb morphogenesis)|go:"GO:0030901"(midbrain development)|go:"GO:0032386"(regulation of intracellular transport)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0035265"(organ growth)|go:"GO:0042048"(olfactory behavior)|go:"GO:0043010"(camera-type eye development)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050808"(synapse organization)|go:"GO:0071542"(dopaminergic neuron differentiation)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR001781(Zinc finger, LIM-type) interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003961(Fibronectin, type III)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR036116|interpro:IPR043136|go:"GO:0005634"(nucleus)|go:"GO:0014733"(regulation of skeletal muscle adaptation)|go:"GO:0016529"(sarcoplasmic reticulum)|go:"GO:0031430"(M band)|go:"GO:0032515"(negative regulation of phosphoprotein phosphatase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0043034"(costamere)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0070885"(negative regulation of calcineurin-NFAT signaling cascade) - - - figure legend:6, Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-mn9d)|taxid:10090(Mus musculus MN9D neuronal cells) - 2017/03/20 2017/04/11 rogid:cuCwa39MvAWc7sWkxjHWeNZSKns10090 rogid:ek9n/S3fFk+0nfdkXmcpuCie/2k10090 rigid:06051nMYCMcUC489wGpReDEOlG4 false his tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification)