#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B intact:EBI-10948707 uniprotkb:P53617 rnacentral:URS00001C2E5F_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:snr74 yeast(display_short)|psi-mi:EBI-10948707(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16587220|imex:IM-26267-61 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 4D|comment:This protein is involved in snr74 maturation and binds downstream the mature snRNA 3' end|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/12/01 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10922160 uniprotkb:P08518 rnacentral:URS00004957CB_559292 intact:EBI-15767|uniprotkb:Q12738|uniprotkb:Q7Z9Y0|uniprotkb:D6W2K8|ensemblfungi:YOR151C psi-mi:snr13 yeast(display_short)|psi-mi:EBI-10922160(display_long) psi-mi:rpb2_yeast(display_long)|uniprotkb:YOR151C(locus name)|uniprotkb:RPB2(gene name)|psi-mi:RPB2(display_short)|uniprotkb:RPB150(gene name synonym)|uniprotkb:RPO22(gene name synonym)|uniprotkb:DNA-directed RNA polymerase II 140 kDa polypeptide(gene name synonym)|uniprotkb:B150(gene name synonym) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631415|imex:IM-26267-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - sgd:S000005677|refseq:NP_014794.3|dip:DIP-14N|mint:P08518|ensemblfungi:YOR151C(gene)|ensemblfungi:YOR151C_mRNA(transcript)|go:"GO:0001172"(transcription, RNA-templated)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR037033|interpro:IPR037034|rcsb pdb:1I3Q|rcsb pdb:1I50|rcsb pdb:1I6H|rcsb pdb:1K83|rcsb pdb:1NIK|rcsb pdb:1NT9|rcsb pdb:1PQV|rcsb pdb:1R5U|rcsb pdb:1R9S|rcsb pdb:1R9T|rcsb pdb:1SFO|rcsb pdb:1TWA|rcsb pdb:1TWC|rcsb pdb:1TWF|rcsb pdb:1TWG|rcsb pdb:1TWH|rcsb pdb:1WCM|rcsb pdb:1Y1V|rcsb pdb:1Y1W|rcsb pdb:1Y1Y|rcsb pdb:1Y77|rcsb pdb:2B63|rcsb pdb:2B8K|rcsb pdb:2E2H|rcsb pdb:2E2I|rcsb pdb:2E2J|rcsb pdb:2JA5|rcsb pdb:2JA6|rcsb pdb:2JA7|rcsb pdb:2JA8|rcsb pdb:2NVQ|rcsb pdb:2NVT|rcsb pdb:2NVX|rcsb pdb:2NVY|rcsb pdb:2NVZ|rcsb pdb:2R7Z|rcsb pdb:2R92|rcsb pdb:2R93|rcsb pdb:2VUM|rcsb pdb:2YU9|rcsb pdb:3CQZ|rcsb pdb:3FKI|rcsb pdb:3GTG|rcsb pdb:3GTJ|rcsb pdb:3GTK|rcsb pdb:3GTL|rcsb pdb:3GTM|rcsb pdb:3GTO|rcsb pdb:3GTP|rcsb pdb:3GTQ|rcsb pdb:3H3V|rcsb pdb:3HOU|rcsb pdb:3HOV|rcsb pdb:3HOW|rcsb pdb:3HOX|rcsb pdb:3HOY|rcsb pdb:3HOZ|rcsb pdb:3I4M|rcsb pdb:3I4N|rcsb pdb:3J0K|rcsb pdb:3J1N|rcsb pdb:3K1F|rcsb pdb:3K7A|rcsb pdb:3M3Y|rcsb pdb:3M4O|rcsb pdb:3PO2|rcsb pdb:3PO3|rcsb pdb:3QT1|rcsb pdb:3RZD|rcsb pdb:3RZO|rcsb pdb:3S14|rcsb pdb:3S15|rcsb pdb:3S16|rcsb pdb:3S17|rcsb pdb:3S1M|rcsb pdb:3S1N|rcsb pdb:3S1Q|rcsb pdb:3S1R|rcsb pdb:3S2D|rcsb pdb:3S2H|rcsb pdb:4A3B|rcsb pdb:4A3C|rcsb pdb:4A3D|rcsb pdb:4A3E|rcsb pdb:4A3F|rcsb pdb:4A3G|rcsb pdb:4A3I|rcsb pdb:4A3J|rcsb pdb:4A3K|rcsb pdb:4A3L|rcsb pdb:4A3M|rcsb pdb:4A93|rcsb pdb:4BBR|rcsb pdb:4BBS|rcsb pdb:4BXX|rcsb pdb:4BXZ|rcsb pdb:4BY1|rcsb pdb:4BY7|rcsb pdb:4V1M|rcsb pdb:4V1N|rcsb pdb:4V1O|rcsb pdb:4X67|rcsb pdb:4X6A|rcsb pdb:4Y52|rcsb pdb:4Y7N|rcsb pdb:5C3E|rcsb pdb:5C44|rcsb pdb:5C4A|rcsb pdb:5C4J|rcsb pdb:5C4X|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5IP7|rcsb pdb:5IP9|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5OT2|rcsb pdb:5SVA|rcsb pdb:5U5Q|rcsb pdb:5VVR|rcsb pdb:5VVS|rcsb pdb:5W4U|rcsb pdb:5W51|rcsb pdb:6BLO|rcsb pdb:6BLP|rcsb pdb:6BM2|rcsb pdb:6BM4|rcsb pdb:6BQF|rcsb pdb:6GYK|rcsb pdb:6GYL|rcsb pdb:6GYM|rcsb pdb:6I84|rcsb pdb:6O6C|rcsb pdb:6UPX|rcsb pdb:6UPY|rcsb pdb:6UPZ|rcsb pdb:6UQ0|rcsb pdb:6UQ1|rcsb pdb:6UQ2|rcsb pdb:6UQ3|rcsb pdb:7KED|rcsb pdb:7KEE|rcsb pdb:7KEF|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-6807505|reactome:R-SCE-72086|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|reactome:R-SCE-9018519 - - crc64:BABD03212C0A583E figure legend:Fig 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/27 - rogid:OtaUDREazRORKDcfBajDLPlXovY559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38996 intact:EBI-10922160 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS00004957CB_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:snr13 yeast(display_short)|psi-mi:EBI-10922160(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631421|imex:IM-26267-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 2|comment:This protein is involved in snr13 maturation and binds 10-50 nucleotides downstream the mature snRNA|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/27 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P08518 intact:EBI-10916101 intact:EBI-15767|uniprotkb:Q12738|uniprotkb:Q7Z9Y0|uniprotkb:D6W2K8|ensemblfungi:YOR151C rnacentral:URS00003F80CD_559292 psi-mi:rpb2_yeast(display_long)|uniprotkb:YOR151C(locus name)|uniprotkb:RPB2(gene name)|psi-mi:RPB2(display_short)|uniprotkb:RPB150(gene name synonym)|uniprotkb:RPO22(gene name synonym)|uniprotkb:DNA-directed RNA polymerase II 140 kDa polypeptide(gene name synonym)|uniprotkb:B150(gene name synonym) psi-mi:snr11 yeast(display_short)|psi-mi:EBI-10916101(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631822|imex:IM-26267-101 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) sgd:S000005677|refseq:NP_014794.3|dip:DIP-14N|mint:P08518|ensemblfungi:YOR151C(gene)|ensemblfungi:YOR151C_mRNA(transcript)|go:"GO:0001172"(transcription, RNA-templated)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR037033|interpro:IPR037034|rcsb pdb:1I3Q|rcsb pdb:1I50|rcsb pdb:1I6H|rcsb pdb:1K83|rcsb pdb:1NIK|rcsb pdb:1NT9|rcsb pdb:1PQV|rcsb pdb:1R5U|rcsb pdb:1R9S|rcsb pdb:1R9T|rcsb pdb:1SFO|rcsb pdb:1TWA|rcsb pdb:1TWC|rcsb pdb:1TWF|rcsb pdb:1TWG|rcsb pdb:1TWH|rcsb pdb:1WCM|rcsb pdb:1Y1V|rcsb pdb:1Y1W|rcsb pdb:1Y1Y|rcsb pdb:1Y77|rcsb pdb:2B63|rcsb pdb:2B8K|rcsb pdb:2E2H|rcsb pdb:2E2I|rcsb pdb:2E2J|rcsb pdb:2JA5|rcsb pdb:2JA6|rcsb pdb:2JA7|rcsb pdb:2JA8|rcsb pdb:2NVQ|rcsb pdb:2NVT|rcsb pdb:2NVX|rcsb pdb:2NVY|rcsb pdb:2NVZ|rcsb pdb:2R7Z|rcsb pdb:2R92|rcsb pdb:2R93|rcsb pdb:2VUM|rcsb pdb:2YU9|rcsb pdb:3CQZ|rcsb pdb:3FKI|rcsb pdb:3GTG|rcsb pdb:3GTJ|rcsb pdb:3GTK|rcsb pdb:3GTL|rcsb pdb:3GTM|rcsb pdb:3GTO|rcsb pdb:3GTP|rcsb pdb:3GTQ|rcsb pdb:3H3V|rcsb pdb:3HOU|rcsb pdb:3HOV|rcsb pdb:3HOW|rcsb pdb:3HOX|rcsb pdb:3HOY|rcsb pdb:3HOZ|rcsb pdb:3I4M|rcsb pdb:3I4N|rcsb pdb:3J0K|rcsb pdb:3J1N|rcsb pdb:3K1F|rcsb pdb:3K7A|rcsb pdb:3M3Y|rcsb pdb:3M4O|rcsb pdb:3PO2|rcsb pdb:3PO3|rcsb pdb:3QT1|rcsb pdb:3RZD|rcsb pdb:3RZO|rcsb pdb:3S14|rcsb pdb:3S15|rcsb pdb:3S16|rcsb pdb:3S17|rcsb pdb:3S1M|rcsb pdb:3S1N|rcsb pdb:3S1Q|rcsb pdb:3S1R|rcsb pdb:3S2D|rcsb pdb:3S2H|rcsb pdb:4A3B|rcsb pdb:4A3C|rcsb pdb:4A3D|rcsb pdb:4A3E|rcsb pdb:4A3F|rcsb pdb:4A3G|rcsb pdb:4A3I|rcsb pdb:4A3J|rcsb pdb:4A3K|rcsb pdb:4A3L|rcsb pdb:4A3M|rcsb pdb:4A93|rcsb pdb:4BBR|rcsb pdb:4BBS|rcsb pdb:4BXX|rcsb pdb:4BXZ|rcsb pdb:4BY1|rcsb pdb:4BY7|rcsb pdb:4V1M|rcsb pdb:4V1N|rcsb pdb:4V1O|rcsb pdb:4X67|rcsb pdb:4X6A|rcsb pdb:4Y52|rcsb pdb:4Y7N|rcsb pdb:5C3E|rcsb pdb:5C44|rcsb pdb:5C4A|rcsb pdb:5C4J|rcsb pdb:5C4X|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5IP7|rcsb pdb:5IP9|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5OT2|rcsb pdb:5SVA|rcsb pdb:5U5Q|rcsb pdb:5VVR|rcsb pdb:5VVS|rcsb pdb:5W4U|rcsb pdb:5W51|rcsb pdb:6BLO|rcsb pdb:6BLP|rcsb pdb:6BM2|rcsb pdb:6BM4|rcsb pdb:6BQF|rcsb pdb:6GYK|rcsb pdb:6GYL|rcsb pdb:6GYM|rcsb pdb:6I84|rcsb pdb:6O6C|rcsb pdb:6UPX|rcsb pdb:6UPY|rcsb pdb:6UPZ|rcsb pdb:6UQ0|rcsb pdb:6UQ1|rcsb pdb:6UQ2|rcsb pdb:6UQ3|rcsb pdb:7KED|rcsb pdb:7KEE|rcsb pdb:7KEF|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-6807505|reactome:R-SCE-72086|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|reactome:R-SCE-9018519 - - crc64:BABD03212C0A583E - figure legend:Fig 3A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 rogid:OtaUDREazRORKDcfBajDLPlXovY559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P08518 intact:EBI-10957299 intact:EBI-15767|uniprotkb:Q12738|uniprotkb:Q7Z9Y0|uniprotkb:D6W2K8|ensemblfungi:YOR151C rnacentral:URS000013DDAE_559292 psi-mi:rpb2_yeast(display_long)|uniprotkb:YOR151C(locus name)|uniprotkb:RPB2(gene name)|psi-mi:RPB2(display_short)|uniprotkb:RPB150(gene name synonym)|uniprotkb:RPO22(gene name synonym)|uniprotkb:DNA-directed RNA polymerase II 140 kDa polypeptide(gene name synonym)|uniprotkb:B150(gene name synonym) psi-mi:snr5 yeast(display_short)|psi-mi:EBI-10957299(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631828|imex:IM-26267-81 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) sgd:S000005677|refseq:NP_014794.3|dip:DIP-14N|mint:P08518|ensemblfungi:YOR151C(gene)|ensemblfungi:YOR151C_mRNA(transcript)|go:"GO:0001172"(transcription, RNA-templated)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR037033|interpro:IPR037034|rcsb pdb:1I3Q|rcsb pdb:1I50|rcsb pdb:1I6H|rcsb pdb:1K83|rcsb pdb:1NIK|rcsb pdb:1NT9|rcsb pdb:1PQV|rcsb pdb:1R5U|rcsb pdb:1R9S|rcsb pdb:1R9T|rcsb pdb:1SFO|rcsb pdb:1TWA|rcsb pdb:1TWC|rcsb pdb:1TWF|rcsb pdb:1TWG|rcsb pdb:1TWH|rcsb pdb:1WCM|rcsb pdb:1Y1V|rcsb pdb:1Y1W|rcsb pdb:1Y1Y|rcsb pdb:1Y77|rcsb pdb:2B63|rcsb pdb:2B8K|rcsb pdb:2E2H|rcsb pdb:2E2I|rcsb pdb:2E2J|rcsb pdb:2JA5|rcsb pdb:2JA6|rcsb pdb:2JA7|rcsb pdb:2JA8|rcsb pdb:2NVQ|rcsb pdb:2NVT|rcsb pdb:2NVX|rcsb pdb:2NVY|rcsb pdb:2NVZ|rcsb pdb:2R7Z|rcsb pdb:2R92|rcsb pdb:2R93|rcsb pdb:2VUM|rcsb pdb:2YU9|rcsb pdb:3CQZ|rcsb pdb:3FKI|rcsb pdb:3GTG|rcsb pdb:3GTJ|rcsb pdb:3GTK|rcsb pdb:3GTL|rcsb pdb:3GTM|rcsb pdb:3GTO|rcsb pdb:3GTP|rcsb pdb:3GTQ|rcsb pdb:3H3V|rcsb pdb:3HOU|rcsb pdb:3HOV|rcsb pdb:3HOW|rcsb pdb:3HOX|rcsb pdb:3HOY|rcsb pdb:3HOZ|rcsb pdb:3I4M|rcsb pdb:3I4N|rcsb pdb:3J0K|rcsb pdb:3J1N|rcsb pdb:3K1F|rcsb pdb:3K7A|rcsb pdb:3M3Y|rcsb pdb:3M4O|rcsb pdb:3PO2|rcsb pdb:3PO3|rcsb pdb:3QT1|rcsb pdb:3RZD|rcsb pdb:3RZO|rcsb pdb:3S14|rcsb pdb:3S15|rcsb pdb:3S16|rcsb pdb:3S17|rcsb pdb:3S1M|rcsb pdb:3S1N|rcsb pdb:3S1Q|rcsb pdb:3S1R|rcsb pdb:3S2D|rcsb pdb:3S2H|rcsb pdb:4A3B|rcsb pdb:4A3C|rcsb pdb:4A3D|rcsb pdb:4A3E|rcsb pdb:4A3F|rcsb pdb:4A3G|rcsb pdb:4A3I|rcsb pdb:4A3J|rcsb pdb:4A3K|rcsb pdb:4A3L|rcsb pdb:4A3M|rcsb pdb:4A93|rcsb pdb:4BBR|rcsb pdb:4BBS|rcsb pdb:4BXX|rcsb pdb:4BXZ|rcsb pdb:4BY1|rcsb pdb:4BY7|rcsb pdb:4V1M|rcsb pdb:4V1N|rcsb pdb:4V1O|rcsb pdb:4X67|rcsb pdb:4X6A|rcsb pdb:4Y52|rcsb pdb:4Y7N|rcsb pdb:5C3E|rcsb pdb:5C44|rcsb pdb:5C4A|rcsb pdb:5C4J|rcsb pdb:5C4X|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5IP7|rcsb pdb:5IP9|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5OT2|rcsb pdb:5SVA|rcsb pdb:5U5Q|rcsb pdb:5VVR|rcsb pdb:5VVS|rcsb pdb:5W4U|rcsb pdb:5W51|rcsb pdb:6BLO|rcsb pdb:6BLP|rcsb pdb:6BM2|rcsb pdb:6BM4|rcsb pdb:6BQF|rcsb pdb:6GYK|rcsb pdb:6GYL|rcsb pdb:6GYM|rcsb pdb:6I84|rcsb pdb:6O6C|rcsb pdb:6UPX|rcsb pdb:6UPY|rcsb pdb:6UPZ|rcsb pdb:6UQ0|rcsb pdb:6UQ1|rcsb pdb:6UQ2|rcsb pdb:6UQ3|rcsb pdb:7KED|rcsb pdb:7KEE|rcsb pdb:7KEF|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-6807505|reactome:R-SCE-72086|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|reactome:R-SCE-9018519 - - crc64:BABD03212C0A583E - figure legend:Fig 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 rogid:OtaUDREazRORKDcfBajDLPlXovY559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P08518 intact:EBI-10921921 intact:EBI-15767|uniprotkb:Q12738|uniprotkb:Q7Z9Y0|uniprotkb:D6W2K8|ensemblfungi:YOR151C rnacentral:URS0000111488_559292 psi-mi:rpb2_yeast(display_long)|uniprotkb:YOR151C(locus name)|uniprotkb:RPB2(gene name)|psi-mi:RPB2(display_short)|uniprotkb:RPB150(gene name synonym)|uniprotkb:RPO22(gene name synonym)|uniprotkb:DNA-directed RNA polymerase II 140 kDa polypeptide(gene name synonym)|uniprotkb:B150(gene name synonym) psi-mi:snr40 yeast(display_short)|psi-mi:EBI-10921921(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631833|imex:IM-26267-103 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) sgd:S000005677|refseq:NP_014794.3|dip:DIP-14N|mint:P08518|ensemblfungi:YOR151C(gene)|ensemblfungi:YOR151C_mRNA(transcript)|go:"GO:0001172"(transcription, RNA-templated)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR037033|interpro:IPR037034|rcsb pdb:1I3Q|rcsb pdb:1I50|rcsb pdb:1I6H|rcsb pdb:1K83|rcsb pdb:1NIK|rcsb pdb:1NT9|rcsb pdb:1PQV|rcsb pdb:1R5U|rcsb pdb:1R9S|rcsb pdb:1R9T|rcsb pdb:1SFO|rcsb pdb:1TWA|rcsb pdb:1TWC|rcsb pdb:1TWF|rcsb pdb:1TWG|rcsb pdb:1TWH|rcsb pdb:1WCM|rcsb pdb:1Y1V|rcsb pdb:1Y1W|rcsb pdb:1Y1Y|rcsb pdb:1Y77|rcsb pdb:2B63|rcsb pdb:2B8K|rcsb pdb:2E2H|rcsb pdb:2E2I|rcsb pdb:2E2J|rcsb pdb:2JA5|rcsb pdb:2JA6|rcsb pdb:2JA7|rcsb pdb:2JA8|rcsb pdb:2NVQ|rcsb pdb:2NVT|rcsb pdb:2NVX|rcsb pdb:2NVY|rcsb pdb:2NVZ|rcsb pdb:2R7Z|rcsb pdb:2R92|rcsb pdb:2R93|rcsb pdb:2VUM|rcsb pdb:2YU9|rcsb pdb:3CQZ|rcsb pdb:3FKI|rcsb pdb:3GTG|rcsb pdb:3GTJ|rcsb pdb:3GTK|rcsb pdb:3GTL|rcsb pdb:3GTM|rcsb pdb:3GTO|rcsb pdb:3GTP|rcsb pdb:3GTQ|rcsb pdb:3H3V|rcsb pdb:3HOU|rcsb pdb:3HOV|rcsb pdb:3HOW|rcsb pdb:3HOX|rcsb pdb:3HOY|rcsb pdb:3HOZ|rcsb pdb:3I4M|rcsb pdb:3I4N|rcsb pdb:3J0K|rcsb pdb:3J1N|rcsb pdb:3K1F|rcsb pdb:3K7A|rcsb pdb:3M3Y|rcsb pdb:3M4O|rcsb pdb:3PO2|rcsb pdb:3PO3|rcsb pdb:3QT1|rcsb pdb:3RZD|rcsb pdb:3RZO|rcsb pdb:3S14|rcsb pdb:3S15|rcsb pdb:3S16|rcsb pdb:3S17|rcsb pdb:3S1M|rcsb pdb:3S1N|rcsb pdb:3S1Q|rcsb pdb:3S1R|rcsb pdb:3S2D|rcsb pdb:3S2H|rcsb pdb:4A3B|rcsb pdb:4A3C|rcsb pdb:4A3D|rcsb pdb:4A3E|rcsb pdb:4A3F|rcsb pdb:4A3G|rcsb pdb:4A3I|rcsb pdb:4A3J|rcsb pdb:4A3K|rcsb pdb:4A3L|rcsb pdb:4A3M|rcsb pdb:4A93|rcsb pdb:4BBR|rcsb pdb:4BBS|rcsb pdb:4BXX|rcsb pdb:4BXZ|rcsb pdb:4BY1|rcsb pdb:4BY7|rcsb pdb:4V1M|rcsb pdb:4V1N|rcsb pdb:4V1O|rcsb pdb:4X67|rcsb pdb:4X6A|rcsb pdb:4Y52|rcsb pdb:4Y7N|rcsb pdb:5C3E|rcsb pdb:5C44|rcsb pdb:5C4A|rcsb pdb:5C4J|rcsb pdb:5C4X|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5IP7|rcsb pdb:5IP9|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5OT2|rcsb pdb:5SVA|rcsb pdb:5U5Q|rcsb pdb:5VVR|rcsb pdb:5VVS|rcsb pdb:5W4U|rcsb pdb:5W51|rcsb pdb:6BLO|rcsb pdb:6BLP|rcsb pdb:6BM2|rcsb pdb:6BM4|rcsb pdb:6BQF|rcsb pdb:6GYK|rcsb pdb:6GYL|rcsb pdb:6GYM|rcsb pdb:6I84|rcsb pdb:6O6C|rcsb pdb:6UPX|rcsb pdb:6UPY|rcsb pdb:6UPZ|rcsb pdb:6UQ0|rcsb pdb:6UQ1|rcsb pdb:6UQ2|rcsb pdb:6UQ3|rcsb pdb:7KED|rcsb pdb:7KEE|rcsb pdb:7KEF|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-6807505|reactome:R-SCE-72086|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|reactome:R-SCE-9018519 - - crc64:BABD03212C0A583E - figure legend:Fig 3D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 rogid:OtaUDREazRORKDcfBajDLPlXovY559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P08518 intact:EBI-10916343 intact:EBI-15767|uniprotkb:Q12738|uniprotkb:Q7Z9Y0|uniprotkb:D6W2K8|ensemblfungi:YOR151C rnacentral:URS00000284F1_559292 psi-mi:rpb2_yeast(display_long)|uniprotkb:YOR151C(locus name)|uniprotkb:RPB2(gene name)|psi-mi:RPB2(display_short)|uniprotkb:RPB150(gene name synonym)|uniprotkb:RPO22(gene name synonym)|uniprotkb:DNA-directed RNA polymerase II 140 kDa polypeptide(gene name synonym)|uniprotkb:B150(gene name synonym) psi-mi:snr45 yeast(display_short)|psi-mi:EBI-10916343(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631838|imex:IM-26267-83 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) sgd:S000005677|refseq:NP_014794.3|dip:DIP-14N|mint:P08518|ensemblfungi:YOR151C(gene)|ensemblfungi:YOR151C_mRNA(transcript)|go:"GO:0001172"(transcription, RNA-templated)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR037033|interpro:IPR037034|rcsb pdb:1I3Q|rcsb pdb:1I50|rcsb pdb:1I6H|rcsb pdb:1K83|rcsb pdb:1NIK|rcsb pdb:1NT9|rcsb pdb:1PQV|rcsb pdb:1R5U|rcsb pdb:1R9S|rcsb pdb:1R9T|rcsb pdb:1SFO|rcsb pdb:1TWA|rcsb pdb:1TWC|rcsb pdb:1TWF|rcsb pdb:1TWG|rcsb pdb:1TWH|rcsb pdb:1WCM|rcsb pdb:1Y1V|rcsb pdb:1Y1W|rcsb pdb:1Y1Y|rcsb pdb:1Y77|rcsb pdb:2B63|rcsb pdb:2B8K|rcsb pdb:2E2H|rcsb pdb:2E2I|rcsb pdb:2E2J|rcsb pdb:2JA5|rcsb pdb:2JA6|rcsb pdb:2JA7|rcsb pdb:2JA8|rcsb pdb:2NVQ|rcsb pdb:2NVT|rcsb pdb:2NVX|rcsb pdb:2NVY|rcsb pdb:2NVZ|rcsb pdb:2R7Z|rcsb pdb:2R92|rcsb pdb:2R93|rcsb pdb:2VUM|rcsb pdb:2YU9|rcsb pdb:3CQZ|rcsb pdb:3FKI|rcsb pdb:3GTG|rcsb pdb:3GTJ|rcsb pdb:3GTK|rcsb pdb:3GTL|rcsb pdb:3GTM|rcsb pdb:3GTO|rcsb pdb:3GTP|rcsb pdb:3GTQ|rcsb pdb:3H3V|rcsb pdb:3HOU|rcsb pdb:3HOV|rcsb pdb:3HOW|rcsb pdb:3HOX|rcsb pdb:3HOY|rcsb pdb:3HOZ|rcsb pdb:3I4M|rcsb pdb:3I4N|rcsb pdb:3J0K|rcsb pdb:3J1N|rcsb pdb:3K1F|rcsb pdb:3K7A|rcsb pdb:3M3Y|rcsb pdb:3M4O|rcsb pdb:3PO2|rcsb pdb:3PO3|rcsb pdb:3QT1|rcsb pdb:3RZD|rcsb pdb:3RZO|rcsb pdb:3S14|rcsb pdb:3S15|rcsb pdb:3S16|rcsb pdb:3S17|rcsb pdb:3S1M|rcsb pdb:3S1N|rcsb pdb:3S1Q|rcsb pdb:3S1R|rcsb pdb:3S2D|rcsb pdb:3S2H|rcsb pdb:4A3B|rcsb pdb:4A3C|rcsb pdb:4A3D|rcsb pdb:4A3E|rcsb pdb:4A3F|rcsb pdb:4A3G|rcsb pdb:4A3I|rcsb pdb:4A3J|rcsb pdb:4A3K|rcsb pdb:4A3L|rcsb pdb:4A3M|rcsb pdb:4A93|rcsb pdb:4BBR|rcsb pdb:4BBS|rcsb pdb:4BXX|rcsb pdb:4BXZ|rcsb pdb:4BY1|rcsb pdb:4BY7|rcsb pdb:4V1M|rcsb pdb:4V1N|rcsb pdb:4V1O|rcsb pdb:4X67|rcsb pdb:4X6A|rcsb pdb:4Y52|rcsb pdb:4Y7N|rcsb pdb:5C3E|rcsb pdb:5C44|rcsb pdb:5C4A|rcsb pdb:5C4J|rcsb pdb:5C4X|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5IP7|rcsb pdb:5IP9|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5OT2|rcsb pdb:5SVA|rcsb pdb:5U5Q|rcsb pdb:5VVR|rcsb pdb:5VVS|rcsb pdb:5W4U|rcsb pdb:5W51|rcsb pdb:6BLO|rcsb pdb:6BLP|rcsb pdb:6BM2|rcsb pdb:6BM4|rcsb pdb:6BQF|rcsb pdb:6GYK|rcsb pdb:6GYL|rcsb pdb:6GYM|rcsb pdb:6I84|rcsb pdb:6O6C|rcsb pdb:6UPX|rcsb pdb:6UPY|rcsb pdb:6UPZ|rcsb pdb:6UQ0|rcsb pdb:6UQ1|rcsb pdb:6UQ2|rcsb pdb:6UQ3|rcsb pdb:7KED|rcsb pdb:7KEE|rcsb pdb:7KEF|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-6807505|reactome:R-SCE-72086|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|reactome:R-SCE-9018519 - - crc64:BABD03212C0A583E - figure legend:Fig 3C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 rogid:OtaUDREazRORKDcfBajDLPlXovY559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38996 intact:EBI-10916101 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS00003F80CD_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:snr11 yeast(display_short)|psi-mi:EBI-10916101(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631843|imex:IM-26267-21 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38996 intact:EBI-10957299 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS000013DDAE_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:snr5 yeast(display_short)|psi-mi:EBI-10957299(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631850|imex:IM-26267-63 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38996 intact:EBI-10921921 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS0000111488_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:snr40 yeast(display_short)|psi-mi:EBI-10921921(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631856|imex:IM-26267-23 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38996 intact:EBI-10916343 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS00000284F1_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:snr45 yeast(display_short)|psi-mi:EBI-10916343(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631862|imex:IM-26267-41 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10916101 uniprotkb:P53617 rnacentral:URS00003F80CD_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:snr11 yeast(display_short)|psi-mi:EBI-10916101(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631870|imex:IM-26267-25 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 3A, Fig5B,C|comment:This protein is involved in snr11 maturation and mainly binds downstream the mature 3' end. In the absence of glucose a second binding region appears within the mature snorna.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P53617 intact:EBI-10957299 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS000013DDAE_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:snr5 yeast(display_short)|psi-mi:EBI-10957299(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631877|imex:IM-26267-27 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P53617 intact:EBI-10916343 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS00000284F1_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:snr45 yeast(display_short)|psi-mi:EBI-10916343(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631883|imex:IM-26267-105 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P53617 intact:EBI-10921921 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS0000111488_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:snr40 yeast(display_short)|psi-mi:EBI-10921921(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631889|imex:IM-26267-85 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q00416 intact:EBI-10916101 intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4 rnacentral:URS00003F80CD_559292 psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym) psi-mi:snr11 yeast(display_short)|psi-mi:EBI-10916101(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631919|imex:IM-26267-87 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416 - - crc64:88F0FF95B3A8BD89 - figure legend:Fig3A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q00416 intact:EBI-10957299 intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4 rnacentral:URS000013DDAE_559292 psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym) psi-mi:snr5 yeast(display_short)|psi-mi:EBI-10957299(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16631939|imex:IM-26267-89 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416 - - crc64:88F0FF95B3A8BD89 - figure legend:Fig3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10922011 uniprotkb:P53617 rnacentral:URS0000312DD7_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:snr50 yeast(display_short)|psi-mi:EBI-10922011(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16632034|imex:IM-26267-43 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 4A,B|comment:This protein is involved in snr50 maturation and mainly binds upstream the mature 5' end|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10922574 uniprotkb:P38996 rnacentral:URS0000346AFC_559292 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 psi-mi:snr54 yeast(display_short)|psi-mi:EBI-10922574(display_long) psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16632050|imex:IM-26267-65 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 figure legend:Fig 4C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 - rogid:iVBA824UReQJmvua7xganVlrm9U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P53617 intact:EBI-10922574 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS0000346AFC_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:snr54 yeast(display_short)|psi-mi:EBI-10922574(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16632058|imex:IM-26267-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 4C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/11/28 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38996 intact:EBI-10948707 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS00001C2E5F_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:snr74 yeast(display_short)|psi-mi:EBI-10948707(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16640583|imex:IM-26267-45 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 4D|comment:This protein is involved in snr74 maturation and binds downstream the mature snRNA|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/12/01 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10954474 uniprotkb:P38996 rnacentral:URS000022B680_559292 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 psi-mi:snr72 yeast-1(display_short)|psi-mi:EBI-10954474(display_long) psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16640591|imex:IM-26267-67 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 figure legend:Fig 4D|comment:This protein is involved in snr72 maturation and binds downstream the mature snRNA|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/12/01 - rogid:iVBA824UReQJmvua7xganVlrm9U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10948704 uniprotkb:P38996 rnacentral:URS00003E7141_559292 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 psi-mi:snr73 yeast(display_short)|psi-mi:EBI-10948704(display_long) psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16640597|imex:IM-26267-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 figure legend:Fig 4D|comment:This protein is involved in snr73 maturation and binds downstream the mature snRNA|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/12/01 - rogid:iVBA824UReQJmvua7xganVlrm9U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-11711579 uniprotkb:P38996 rnacentral:URS0000507CED_559292 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 psi-mi:snr78 yeast(display_short)|psi-mi:EBI-11711579(display_long) psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16640603|imex:IM-26267-69 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 figure legend:Fig 4D|comment:This protein is involved in snr78 maturation and binds downstream the mature snRNA|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/12/01 - rogid:iVBA824UReQJmvua7xganVlrm9U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10948722 uniprotkb:P53617 rnacentral:URS000022816F_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:snr77 yeast(display_short)|psi-mi:EBI-10948722(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16640615|imex:IM-26267-107 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 4D|comment:This protein is involved in snr77 maturation and binds downstream the mature snRNA 3' end|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/12/01 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P53617 intact:EBI-10948704 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS00003E7141_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:snr73 yeast(display_short)|psi-mi:EBI-10948704(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16640621|imex:IM-26267-9 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 4D|comment:This protein is involved in snr73 maturation and binds downstream the mature snRNA 3' end|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/12/01 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10954926 uniprotkb:P53617 rnacentral:URS00004E8887_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:snr76 yeast(display_short)|psi-mi:EBI-10954926(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16640627|imex:IM-26267-71 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 4D|comment:This protein is involved in snr76 maturation and binds downstream the mature snRNA 3' end|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/12/01 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-11711579 uniprotkb:P53617 rnacentral:URS0000507CED_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:snr78 yeast(display_short)|psi-mi:EBI-11711579(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16640633|imex:IM-26267-47 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 4D|comment:This protein is involved in snr78 maturation and binds downstream the mature snRNA 3' end|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2017/12/01 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10824860 uniprotkb:P53617 rnacentral:URS00000E463C_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:snr3 yeast(display_short)|psi-mi:EBI-10824860(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16640947|imex:IM-26267-29 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig5A|comment:This protein is involved in snr3 maturation and mainly binds downstream the mature 3' end. In the absence of glucose a second binding region appears within the mature snorna.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/22 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P53617 intact:EBI-10922160 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS00004957CB_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:snr13 yeast(display_short)|psi-mi:EBI-10922160(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16746713|imex:IM-26267-109 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 2|comment:This protein is involved in snr13 maturation and binds downstream the mature snRNA|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/22 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P53617 intact:EBI-10054789 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS000012D749_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:snr19_u1_yeast(display_short)|psi-mi:EBI-10054789(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16746903|imex:IM-26267-91 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0607"(small nuclear rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 6A|comment:This protein is involved in snr19 maturation and mainly binds downstream the mature 3' end.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/23 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10860871 uniprotkb:P53617 rnacentral:URS000023C730_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:lsr1_snr20_u2 yeast(display_short)|psi-mi:EBI-10860871(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16746912|imex:IM-26267-73 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0607"(small nuclear rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 6B|comment:This protein is involved in snr19 maturation and mainly binds downstream the mature 3' end. I|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/23 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-2213511 uniprotkb:P53617 rnacentral:URS0000348061_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:tlc1_yeast_rna(display_short)|psi-mi:EBI-2213511(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16746998|imex:IM-26267-31 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0320"(ribonucleic acid) psi-mi:"MI:0326"(protein) sgd:S000006657(see-also) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - comment:"TLC1 RNA contains a template sequence that Est2p uses to add irregular repeats of TG(1-3) residues onto a DNA end; RNA template component of telomerase" crc64:75082BDB0C42AE37 figure legend:Fig 6C|comment:This protein is involved in tlc1 RNA maturation and mainly binds downstream the mature 3' end in the precursor RNA.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/23 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-11666765 uniprotkb:P53617 ensembl:YLR136C|genbank identifier:NM_001182023 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:cth2 yeast(display_short)|psi-mi:EBI-11666765(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747211|imex:IM-26267-33 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0324"(messenger rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 7A|comment:This protein is involved in mRNA maturation and mainly binds downstream the mature 3' end.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-16747193 uniprotkb:P53617 ensemblgenomes:YLR109W intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:ahp1_ylr109w(display_short)|psi-mi:EBI-16747193(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747219|imex:IM-26267-11 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0324"(messenger rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 7B|comment:This protein is involved in mRNA maturation and mainly binds downstream the mature 3' end.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-16747195 uniprotkb:P53617 ensemblgenomes:YKL216W intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:ura1_ykl216w(display_short)|psi-mi:EBI-16747195(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747225|imex:IM-26267-111 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0324"(messenger rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 7C|comment:This protein is involved in mRNA maturation and mainly binds downstream the mature 3' end.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-16747198 uniprotkb:P53617 ensemblgenomes:YJL151C intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:sna3_yjl151c(display_short)|psi-mi:EBI-16747198(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747242|imex:IM-26267-75 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0324"(messenger rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 7D|comment:This protein is involved in mRNA maturation and mainly binds downstream the mature 3' end.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q00416 intact:EBI-16747193 intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4 ensemblgenomes:YLR109W psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym) psi-mi:ahp1_ylr109w(display_short)|psi-mi:EBI-16747193(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747275|imex:IM-26267-49 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0324"(messenger rna) refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416 - - crc64:88F0FF95B3A8BD89 - figure legend:Fig 7B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-16747195 uniprotkb:Q00416 ensemblgenomes:YKL216W intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4 psi-mi:ura1_ykl216w(display_short)|psi-mi:EBI-16747195(display_long) psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747281|imex:IM-26267-13 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0324"(messenger rna) psi-mi:"MI:0326"(protein) - refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416 - - crc64:88F0FF95B3A8BD89 figure legend:Fig 7C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 - rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-11705578 uniprotkb:P38996 rnacentral:URS00000890D0_559292 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 psi-mi:trna phe gaa precursor(display_short)|psi-mi:EBI-11705578(display_long) psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747330|imex:IM-26267-93 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0325"(transfer rna) psi-mi:"MI:0326"(protein) - interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 figure legend:Fig 8B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 - rogid:iVBA824UReQJmvua7xganVlrm9U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38996 intact:EBI-16747317 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS00001AB1C5_4932 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:trna pro ugg precursor(display_short)|psi-mi:EBI-16747317(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747377|imex:IM-26267-77 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 8A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-11705578 uniprotkb:P53617 rnacentral:URS00000890D0_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:trna phe gaa precursor(display_short)|psi-mi:EBI-11705578(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747383|imex:IM-26267-15 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0325"(transfer rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 8B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P08518 intact:EBI-16747317 intact:EBI-15767|uniprotkb:Q12738|uniprotkb:Q7Z9Y0|uniprotkb:D6W2K8|ensemblfungi:YOR151C rnacentral:URS00001AB1C5_4932 psi-mi:rpb2_yeast(display_long)|uniprotkb:YOR151C(locus name)|uniprotkb:RPB2(gene name)|psi-mi:RPB2(display_short)|uniprotkb:RPB150(gene name synonym)|uniprotkb:RPO22(gene name synonym)|uniprotkb:DNA-directed RNA polymerase II 140 kDa polypeptide(gene name synonym)|uniprotkb:B150(gene name synonym) psi-mi:trna pro ugg precursor(display_short)|psi-mi:EBI-16747317(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747397|imex:IM-26267-51 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) sgd:S000005677|refseq:NP_014794.3|dip:DIP-14N|mint:P08518|ensemblfungi:YOR151C(gene)|ensemblfungi:YOR151C_mRNA(transcript)|go:"GO:0001172"(transcription, RNA-templated)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR037033|interpro:IPR037034|rcsb pdb:1I3Q|rcsb pdb:1I50|rcsb pdb:1I6H|rcsb pdb:1K83|rcsb pdb:1NIK|rcsb pdb:1NT9|rcsb pdb:1PQV|rcsb pdb:1R5U|rcsb pdb:1R9S|rcsb pdb:1R9T|rcsb pdb:1SFO|rcsb pdb:1TWA|rcsb pdb:1TWC|rcsb pdb:1TWF|rcsb pdb:1TWG|rcsb pdb:1TWH|rcsb pdb:1WCM|rcsb pdb:1Y1V|rcsb pdb:1Y1W|rcsb pdb:1Y1Y|rcsb pdb:1Y77|rcsb pdb:2B63|rcsb pdb:2B8K|rcsb pdb:2E2H|rcsb pdb:2E2I|rcsb pdb:2E2J|rcsb pdb:2JA5|rcsb pdb:2JA6|rcsb pdb:2JA7|rcsb pdb:2JA8|rcsb pdb:2NVQ|rcsb pdb:2NVT|rcsb pdb:2NVX|rcsb pdb:2NVY|rcsb pdb:2NVZ|rcsb pdb:2R7Z|rcsb pdb:2R92|rcsb pdb:2R93|rcsb pdb:2VUM|rcsb pdb:2YU9|rcsb pdb:3CQZ|rcsb pdb:3FKI|rcsb pdb:3GTG|rcsb pdb:3GTJ|rcsb pdb:3GTK|rcsb pdb:3GTL|rcsb pdb:3GTM|rcsb pdb:3GTO|rcsb pdb:3GTP|rcsb pdb:3GTQ|rcsb pdb:3H3V|rcsb pdb:3HOU|rcsb pdb:3HOV|rcsb pdb:3HOW|rcsb pdb:3HOX|rcsb pdb:3HOY|rcsb pdb:3HOZ|rcsb pdb:3I4M|rcsb pdb:3I4N|rcsb pdb:3J0K|rcsb pdb:3J1N|rcsb pdb:3K1F|rcsb pdb:3K7A|rcsb pdb:3M3Y|rcsb pdb:3M4O|rcsb pdb:3PO2|rcsb pdb:3PO3|rcsb pdb:3QT1|rcsb pdb:3RZD|rcsb pdb:3RZO|rcsb pdb:3S14|rcsb pdb:3S15|rcsb pdb:3S16|rcsb pdb:3S17|rcsb pdb:3S1M|rcsb pdb:3S1N|rcsb pdb:3S1Q|rcsb pdb:3S1R|rcsb pdb:3S2D|rcsb pdb:3S2H|rcsb pdb:4A3B|rcsb pdb:4A3C|rcsb pdb:4A3D|rcsb pdb:4A3E|rcsb pdb:4A3F|rcsb pdb:4A3G|rcsb pdb:4A3I|rcsb pdb:4A3J|rcsb pdb:4A3K|rcsb pdb:4A3L|rcsb pdb:4A3M|rcsb pdb:4A93|rcsb pdb:4BBR|rcsb pdb:4BBS|rcsb pdb:4BXX|rcsb pdb:4BXZ|rcsb pdb:4BY1|rcsb pdb:4BY7|rcsb pdb:4V1M|rcsb pdb:4V1N|rcsb pdb:4V1O|rcsb pdb:4X67|rcsb pdb:4X6A|rcsb pdb:4Y52|rcsb pdb:4Y7N|rcsb pdb:5C3E|rcsb pdb:5C44|rcsb pdb:5C4A|rcsb pdb:5C4J|rcsb pdb:5C4X|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5IP7|rcsb pdb:5IP9|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5OT2|rcsb pdb:5SVA|rcsb pdb:5U5Q|rcsb pdb:5VVR|rcsb pdb:5VVS|rcsb pdb:5W4U|rcsb pdb:5W51|rcsb pdb:6BLO|rcsb pdb:6BLP|rcsb pdb:6BM2|rcsb pdb:6BM4|rcsb pdb:6BQF|rcsb pdb:6GYK|rcsb pdb:6GYL|rcsb pdb:6GYM|rcsb pdb:6I84|rcsb pdb:6O6C|rcsb pdb:6UPX|rcsb pdb:6UPY|rcsb pdb:6UPZ|rcsb pdb:6UQ0|rcsb pdb:6UQ1|rcsb pdb:6UQ2|rcsb pdb:6UQ3|rcsb pdb:7KED|rcsb pdb:7KEE|rcsb pdb:7KEF|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-6807505|reactome:R-SCE-72086|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|reactome:R-SCE-9018519 - - crc64:BABD03212C0A583E - figure legend:Fig 8A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 rogid:OtaUDREazRORKDcfBajDLPlXovY559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P08518 intact:EBI-11705578 intact:EBI-15767|uniprotkb:Q12738|uniprotkb:Q7Z9Y0|uniprotkb:D6W2K8|ensemblfungi:YOR151C rnacentral:URS00000890D0_559292 psi-mi:rpb2_yeast(display_long)|uniprotkb:YOR151C(locus name)|uniprotkb:RPB2(gene name)|psi-mi:RPB2(display_short)|uniprotkb:RPB150(gene name synonym)|uniprotkb:RPO22(gene name synonym)|uniprotkb:DNA-directed RNA polymerase II 140 kDa polypeptide(gene name synonym)|uniprotkb:B150(gene name synonym) psi-mi:trna phe gaa precursor(display_short)|psi-mi:EBI-11705578(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747403|imex:IM-26267-17 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) sgd:S000005677|refseq:NP_014794.3|dip:DIP-14N|mint:P08518|ensemblfungi:YOR151C(gene)|ensemblfungi:YOR151C_mRNA(transcript)|go:"GO:0001172"(transcription, RNA-templated)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR037033|interpro:IPR037034|rcsb pdb:1I3Q|rcsb pdb:1I50|rcsb pdb:1I6H|rcsb pdb:1K83|rcsb pdb:1NIK|rcsb pdb:1NT9|rcsb pdb:1PQV|rcsb pdb:1R5U|rcsb pdb:1R9S|rcsb pdb:1R9T|rcsb pdb:1SFO|rcsb pdb:1TWA|rcsb pdb:1TWC|rcsb pdb:1TWF|rcsb pdb:1TWG|rcsb pdb:1TWH|rcsb pdb:1WCM|rcsb pdb:1Y1V|rcsb pdb:1Y1W|rcsb pdb:1Y1Y|rcsb pdb:1Y77|rcsb pdb:2B63|rcsb pdb:2B8K|rcsb pdb:2E2H|rcsb pdb:2E2I|rcsb pdb:2E2J|rcsb pdb:2JA5|rcsb pdb:2JA6|rcsb pdb:2JA7|rcsb pdb:2JA8|rcsb pdb:2NVQ|rcsb pdb:2NVT|rcsb pdb:2NVX|rcsb pdb:2NVY|rcsb pdb:2NVZ|rcsb pdb:2R7Z|rcsb pdb:2R92|rcsb pdb:2R93|rcsb pdb:2VUM|rcsb pdb:2YU9|rcsb pdb:3CQZ|rcsb pdb:3FKI|rcsb pdb:3GTG|rcsb pdb:3GTJ|rcsb pdb:3GTK|rcsb pdb:3GTL|rcsb pdb:3GTM|rcsb pdb:3GTO|rcsb pdb:3GTP|rcsb pdb:3GTQ|rcsb pdb:3H3V|rcsb pdb:3HOU|rcsb pdb:3HOV|rcsb pdb:3HOW|rcsb pdb:3HOX|rcsb pdb:3HOY|rcsb pdb:3HOZ|rcsb pdb:3I4M|rcsb pdb:3I4N|rcsb pdb:3J0K|rcsb pdb:3J1N|rcsb pdb:3K1F|rcsb pdb:3K7A|rcsb pdb:3M3Y|rcsb pdb:3M4O|rcsb pdb:3PO2|rcsb pdb:3PO3|rcsb pdb:3QT1|rcsb pdb:3RZD|rcsb pdb:3RZO|rcsb pdb:3S14|rcsb pdb:3S15|rcsb pdb:3S16|rcsb pdb:3S17|rcsb pdb:3S1M|rcsb pdb:3S1N|rcsb pdb:3S1Q|rcsb pdb:3S1R|rcsb pdb:3S2D|rcsb pdb:3S2H|rcsb pdb:4A3B|rcsb pdb:4A3C|rcsb pdb:4A3D|rcsb pdb:4A3E|rcsb pdb:4A3F|rcsb pdb:4A3G|rcsb pdb:4A3I|rcsb pdb:4A3J|rcsb pdb:4A3K|rcsb pdb:4A3L|rcsb pdb:4A3M|rcsb pdb:4A93|rcsb pdb:4BBR|rcsb pdb:4BBS|rcsb pdb:4BXX|rcsb pdb:4BXZ|rcsb pdb:4BY1|rcsb pdb:4BY7|rcsb pdb:4V1M|rcsb pdb:4V1N|rcsb pdb:4V1O|rcsb pdb:4X67|rcsb pdb:4X6A|rcsb pdb:4Y52|rcsb pdb:4Y7N|rcsb pdb:5C3E|rcsb pdb:5C44|rcsb pdb:5C4A|rcsb pdb:5C4J|rcsb pdb:5C4X|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5IP7|rcsb pdb:5IP9|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5OT2|rcsb pdb:5SVA|rcsb pdb:5U5Q|rcsb pdb:5VVR|rcsb pdb:5VVS|rcsb pdb:5W4U|rcsb pdb:5W51|rcsb pdb:6BLO|rcsb pdb:6BLP|rcsb pdb:6BM2|rcsb pdb:6BM4|rcsb pdb:6BQF|rcsb pdb:6GYK|rcsb pdb:6GYL|rcsb pdb:6GYM|rcsb pdb:6I84|rcsb pdb:6O6C|rcsb pdb:6UPX|rcsb pdb:6UPY|rcsb pdb:6UPZ|rcsb pdb:6UQ0|rcsb pdb:6UQ1|rcsb pdb:6UQ2|rcsb pdb:6UQ3|rcsb pdb:7KED|rcsb pdb:7KEE|rcsb pdb:7KEF|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-6807505|reactome:R-SCE-72086|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|reactome:R-SCE-9018519 - - crc64:BABD03212C0A583E - figure legend:Fig 8B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 rogid:OtaUDREazRORKDcfBajDLPlXovY559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-11705578 uniprotkb:Q00416 rnacentral:URS00000890D0_559292 intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4 psi-mi:trna phe gaa precursor(display_short)|psi-mi:EBI-11705578(display_long) psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747409|imex:IM-26267-113 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0325"(transfer rna) psi-mi:"MI:0326"(protein) - refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416 - - crc64:88F0FF95B3A8BD89 figure legend:Fig 8B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 - rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q00416 intact:EBI-16747317 intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4 rnacentral:URS00001AB1C5_4932 psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym) psi-mi:trna pro ugg precursor(display_short)|psi-mi:EBI-16747317(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747415|imex:IM-26267-95 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416 - - crc64:88F0FF95B3A8BD89 - figure legend:Fig 8A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P53617 intact:EBI-16747450 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS0000160847_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:trna thr cgu(display_short)|psi-mi:EBI-16747450(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747437|imex:IM-26267-35 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 9A|comment:This protein may be involved in tRNA regulation. The binding only appears In the absence of glucose.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-16747317 uniprotkb:P53617 rnacentral:URS00001AB1C5_4932 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:trna pro ugg precursor(display_short)|psi-mi:EBI-16747317(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747465|imex:IM-26267-37 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0325"(transfer rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 8A, 9A|comment:This protein may be involved in tRNA regulation. The binding only appears In the absence of glucose.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P53617 intact:EBI-16747447 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS00002C74E0_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:trna val cac(display_short)|psi-mi:EBI-16747447(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747471|imex:IM-26267-97 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 9A|comment:This protein may be involved in tRNA regulation. The binding only appears In the absence of glucose.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-16747444 uniprotkb:P53617 rnacentral:URS000006F3EE_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:trna leu gag(display_short)|psi-mi:EBI-16747444(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747477|imex:IM-26267-115 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0325"(transfer rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 9A|comment:This protein may be involved in tRNA regulation. The binding only appears In the absence of glucose.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-11621275 uniprotkb:P53617 rnacentral:URS0000413C32_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:rpr1 yeast(display_short)|psi-mi:EBI-11621275(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747483|imex:IM-26267-79 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0320"(ribonucleic acid) psi-mi:"MI:0326"(protein) sgd:S000006490(see-also) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 9B|comment:This protein may be involved in RNA regulation. The binding only appears In the absence of glucose.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P53617 intact:EBI-11681762 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS0000410E6D_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:trna lys cuu(display_short)|psi-mi:EBI-11681762(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747489|imex:IM-26267-39 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 9A|comment:This protein may be involved in tRNA regulation. The binding only appears In the absence of glucose.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P53617 intact:EBI-16747453 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS00000CCDAD_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:trna arg ccg(display_short)|psi-mi:EBI-16747453(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16747499|imex:IM-26267-99 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 9A|comment:This protein may be involved in tRNA regulation. The binding only appears In the absence of glucose.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/01/24 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10954474 uniprotkb:P53617 rnacentral:URS000022B680_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:snr72 yeast-1(display_short)|psi-mi:EBI-10954474(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16764018|imex:IM-26267-19 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig 4D|comment:This protein is involved in snr11 maturation and mainly binds downstream the mature 3' end. In the absence of glucose a second binding region appears within the mature snorna.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/02/11 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10948710 uniprotkb:P38996 rnacentral:URS0000544237_559292 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 psi-mi:snr75 yeast(display_short)|psi-mi:EBI-10948710(display_long) psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16764026|imex:IM-26267-53 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 figure legend:Fig 4D|comment:This protein is involved in snr74 maturation and binds downstream the mature snRNA|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/02/11 - rogid:iVBA824UReQJmvua7xganVlrm9U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10954926 uniprotkb:P38996 rnacentral:URS00004E8887_559292 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 psi-mi:snr76 yeast(display_short)|psi-mi:EBI-10954926(display_long) psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16764033|imex:IM-26267-55 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 figure legend:Fig 4D|comment:This protein is involved in snr74 maturation and binds downstream the mature snRNA|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/02/11 - rogid:iVBA824UReQJmvua7xganVlrm9U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38996 intact:EBI-10948722 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS000022816F_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:snr77 yeast(display_short)|psi-mi:EBI-10948722(display_long) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16764039|imex:IM-26267-117 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 4D|comment:This protein is involved in snr74 maturation and binds downstream the mature snRNA|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/02/11 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10824860 uniprotkb:P53617 rnacentral:URS00000E463C_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:snr3 yeast(display_short)|psi-mi:EBI-10824860(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16764048|imex:IM-26267-57 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig5A|comment:This protein is involved in snr3 maturation and mainly binds downstream the mature 3' end. In the absence of glucose a second binding region appears within the mature snorna.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/02/11 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-10916101 uniprotkb:P53617 rnacentral:URS00003F80CD_559292 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 psi-mi:snr11 yeast(display_short)|psi-mi:EBI-10916101(display_long) psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:"MI:2188"(par-clip) Jamonnak et al. (2011) pubmed:21954178|imex:IM-26267 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16764066|imex:IM-26267-59 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0609"(small nucleolar rna) psi-mi:"MI:0326"(protein) - ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 figure legend:Fig5B,C|comment:This protein is involved in snr11 maturation and mainly binds downstream the mature 3' end. In the absence of glucose a second binding region appears within the mature snorna.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2017/02/22 2018/02/11 - rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - false - tandem tag:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification)