#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:Q12159	uniprotkb:P39081	intact:EBI-29516|uniprotkb:D6VT14|ensemblfungi:YDR381W	intact:EBI-12980|uniprotkb:Q04932|uniprotkb:D6VSL0|ensemblfungi:YDR228C	psi-mi:yra1_yeast(display_long)|uniprotkb:YRA1(gene name)|psi-mi:YRA1(display_short)|uniprotkb:D9481.2(orf name)|uniprotkb:D9509.1(orf name)|uniprotkb:YDR381W(locus name)	psi-mi:pcf11_yeast(display_long)|uniprotkb:PCF11(gene name)|psi-mi:PCF11(display_short)|uniprotkb:YDR228C(locus name)|uniprotkb:YD9934.13C(orf name)|uniprotkb:protein 1 of CF I(gene name synonym)	psi-mi:"MI:0096"(pull down)	Johnson et al. (2011)	pubmed:21947206|doi:10.1038/nsmb.2126|imex:IM-17085	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0407"(direct interaction)	psi-mi:"MI:0465"(DIP)	intact:EBI-15945817|imex:IM-17085-1|dip:DIP-187994E	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_010669.1|sgd:S000002789|dip:DIP-1791N|mint:Q12159|ensemblfungi:YDR381W(gene)|ensemblfungi:YDR381W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0003723"(RNA binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0043462"(regulation of ATP-dependent activity)|go:"GO:1902281"(negative regulation of RNA helicase activity)|go:"GO:1990119"(RNA helicase inhibitor activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034357|interpro:IPR035979|rcsb pdb:5SUP	sgd:S000002636|ensemblfungi:YDR228C(gene)|ensemblfungi:YDR228C_mRNA(transcript)|refseq:NP_010514.3|go:"GO:0000993"(RNA polymerase II complex binding)|dip:DIP-944N|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0030846"("termination of RNA polymerase II transcription, poly(A)-coupled")|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR021605|rcsb pdb:1SZ9|rcsb pdb:1SZA|rcsb pdb:2BF0|rcsb pdb:2NAX|rcsb pdb:2NPI|rcsb pdb:4C0B|rcsb pdb:4C0H|rcsb pdb:4OI4|rcsb pdb:5M9Z	psi-mi:"MI:0465"(dip)	crc64:480B5B6DC0D14BE9	crc64:66F91BA9577E82F1	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2017/08/07	2017/08/10	rogid:pLiU4X4uQRi7nw6fxaSJW7Ppum4559292	rogid:NT0NGp2ly1eBgnP0a3SbaAxU0ok559292	rigid:YyNBNcuSWwsGrVRtsfIZCbAVSOI	false	glutathione s tranferase tag:n-n	binding-associated region:420-608|his tag:c-c	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q12159	uniprotkb:P39081	intact:EBI-29516|uniprotkb:D6VT14|ensemblfungi:YDR381W	intact:EBI-12980|uniprotkb:Q04932|uniprotkb:D6VSL0|ensemblfungi:YDR228C	psi-mi:yra1_yeast(display_long)|uniprotkb:YRA1(gene name)|psi-mi:YRA1(display_short)|uniprotkb:D9481.2(orf name)|uniprotkb:D9509.1(orf name)|uniprotkb:YDR381W(locus name)	psi-mi:pcf11_yeast(display_long)|uniprotkb:PCF11(gene name)|psi-mi:PCF11(display_short)|uniprotkb:YDR228C(locus name)|uniprotkb:YD9934.13C(orf name)|uniprotkb:protein 1 of CF I(gene name synonym)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Johnson et al. (2011)	pubmed:21947206|doi:10.1038/nsmb.2126|imex:IM-17085	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0465"(DIP)	intact:EBI-15945859|imex:IM-17085-3|dip:DIP-187995E	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_010669.1|sgd:S000002789|dip:DIP-1791N|mint:Q12159|ensemblfungi:YDR381W(gene)|ensemblfungi:YDR381W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0003723"(RNA binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0043462"(regulation of ATP-dependent activity)|go:"GO:1902281"(negative regulation of RNA helicase activity)|go:"GO:1990119"(RNA helicase inhibitor activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034357|interpro:IPR035979|rcsb pdb:5SUP	sgd:S000002636|ensemblfungi:YDR228C(gene)|ensemblfungi:YDR228C_mRNA(transcript)|refseq:NP_010514.3|go:"GO:0000993"(RNA polymerase II complex binding)|dip:DIP-944N|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0030846"("termination of RNA polymerase II transcription, poly(A)-coupled")|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR021605|rcsb pdb:1SZ9|rcsb pdb:1SZA|rcsb pdb:2BF0|rcsb pdb:2NAX|rcsb pdb:2NPI|rcsb pdb:4C0B|rcsb pdb:4C0H|rcsb pdb:4OI4|rcsb pdb:5M9Z	psi-mi:"MI:0465"(dip)	crc64:480B5B6DC0D14BE9	crc64:66F91BA9577E82F1	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2017/08/07	2017/08/10	rogid:pLiU4X4uQRi7nw6fxaSJW7Ppum4559292	rogid:NT0NGp2ly1eBgnP0a3SbaAxU0ok559292	rigid:+Ae2JfVLs2fnCXo18wY4z3WnRGw	false	-	ha tag:c-c	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q12159	uniprotkb:Q07478	intact:EBI-29516|uniprotkb:D6VT14|ensemblfungi:YDR381W	intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5	psi-mi:yra1_yeast(display_long)|uniprotkb:YRA1(gene name)|psi-mi:YRA1(display_short)|uniprotkb:D9481.2(orf name)|uniprotkb:D9509.1(orf name)|uniprotkb:YDR381W(locus name)	psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Johnson et al. (2011)	pubmed:21947206|doi:10.1038/nsmb.2126|imex:IM-17085	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0465"(DIP)	intact:EBI-15945859|imex:IM-17085-3|dip:DIP-187995E	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_010669.1|sgd:S000002789|dip:DIP-1791N|mint:Q12159|ensemblfungi:YDR381W(gene)|ensemblfungi:YDR381W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0003723"(RNA binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0043462"(regulation of ATP-dependent activity)|go:"GO:1902281"(negative regulation of RNA helicase activity)|go:"GO:1990119"(RNA helicase inhibitor activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034357|interpro:IPR035979|rcsb pdb:5SUP	sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478	psi-mi:"MI:0465"(dip)	crc64:480B5B6DC0D14BE9	crc64:AB3605A8C38A560C	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2017/08/07	2017/08/10	rogid:pLiU4X4uQRi7nw6fxaSJW7Ppum4559292	rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292	rigid:+Ae2JfVLs2fnCXo18wY4z3WnRGw	false	-	-	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q08685	uniprotkb:P39081	intact:EBI-29732|uniprotkb:D6W2V1|ensemblfungi:YOR250C	intact:EBI-12980|uniprotkb:Q04932|uniprotkb:D6VSL0|ensemblfungi:YDR228C	psi-mi:clp1_yeast(display_long)|uniprotkb:CLP1(gene name)|psi-mi:CLP1(display_short)|uniprotkb:YOR250C(locus name)	psi-mi:pcf11_yeast(display_long)|uniprotkb:PCF11(gene name)|psi-mi:PCF11(display_short)|uniprotkb:YDR228C(locus name)|uniprotkb:YD9934.13C(orf name)|uniprotkb:protein 1 of CF I(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Johnson et al. (2011)	pubmed:21947206|doi:10.1038/nsmb.2126|imex:IM-17085	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0465"(DIP)	intact:EBI-15945840|imex:IM-17085-2|dip:DIP-1672E	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_014893.1|sgd:S000005776|dip:DIP-1487N|mint:Q08685|ensemblfungi:YOR250C(gene)|ensemblfungi:YOR250C_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0006388"(tRNA splicing, via endonucleolytic cleavage and ligation)|go:"GO:0006396"(RNA processing)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0051731"(polynucleotide 5'-hydroxyl-kinase activity)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR010655(Pre-mRNA cleavage complex II Clp1)|interpro:IPR027417|interpro:IPR028606|interpro:IPR032319|interpro:IPR032324|interpro:IPR038238|interpro:IPR038239|rcsb pdb:2NPI|rcsb pdb:4C0B|rcsb pdb:4C0H|rcsb pdb:4OI4	sgd:S000002636|ensemblfungi:YDR228C(gene)|ensemblfungi:YDR228C_mRNA(transcript)|refseq:NP_010514.3|go:"GO:0000993"(RNA polymerase II complex binding)|dip:DIP-944N|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0030846"("termination of RNA polymerase II transcription, poly(A)-coupled")|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR021605|rcsb pdb:1SZ9|rcsb pdb:1SZA|rcsb pdb:2BF0|rcsb pdb:2NAX|rcsb pdb:2NPI|rcsb pdb:4C0B|rcsb pdb:4C0H|rcsb pdb:4OI4|rcsb pdb:5M9Z	psi-mi:"MI:0465"(dip)	crc64:B00F7659E83090DA	crc64:66F91BA9577E82F1	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2017/08/07	2017/08/10	rogid:WiC5KIjGJ6qTn+XuPdCL9J/eYeo559292	rogid:NT0NGp2ly1eBgnP0a3SbaAxU0ok559292	rigid:H/LbnMks0Zmajvv8dl33rWynUJ0	false	-	ha tag:c-c	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:P39081	uniprotkb:Q07478	intact:EBI-12980|uniprotkb:Q04932|uniprotkb:D6VSL0|ensemblfungi:YDR228C	intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5	psi-mi:pcf11_yeast(display_long)|uniprotkb:PCF11(gene name)|psi-mi:PCF11(display_short)|uniprotkb:YDR228C(locus name)|uniprotkb:YD9934.13C(orf name)|uniprotkb:protein 1 of CF I(gene name synonym)	psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Johnson et al. (2011)	pubmed:21947206|doi:10.1038/nsmb.2126|imex:IM-17085	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0465"(DIP)	intact:EBI-15945879|imex:IM-17085-4|dip:DIP-187996E	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000002636|ensemblfungi:YDR228C(gene)|ensemblfungi:YDR228C_mRNA(transcript)|refseq:NP_010514.3|go:"GO:0000993"(RNA polymerase II complex binding)|dip:DIP-944N|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0030846"("termination of RNA polymerase II transcription, poly(A)-coupled")|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR021605|rcsb pdb:1SZ9|rcsb pdb:1SZA|rcsb pdb:2BF0|rcsb pdb:2NAX|rcsb pdb:2NPI|rcsb pdb:4C0B|rcsb pdb:4C0H|rcsb pdb:4OI4|rcsb pdb:5M9Z	sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478	psi-mi:"MI:0465"(dip)	crc64:66F91BA9577E82F1	crc64:AB3605A8C38A560C	full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2017/08/07	2017/08/10	rogid:NT0NGp2ly1eBgnP0a3SbaAxU0ok559292	rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292	rigid:HVr4FZyYruBJNLQwRe/8KzFuQYE	false	ha tag:c-c	-	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)