#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:O82804 uniprotkb:O04211 intact:EBI-16415030|ensemblplants:AT2G25930.1|uniprotkb:O04419|uniprotkb:Q8L7A2 intact:EBI-16415004|ensemblplants:AT2G40080.1 psi-mi:elf3_arath(display_long)|uniprotkb:Nematode-responsive protein(gene name synonym)|uniprotkb:ELF3(gene name)|psi-mi:ELF3(display_short)|uniprotkb:PYK20(gene name synonym)|uniprotkb:F17H15.25(orf name)|uniprotkb:T19L18.26(orf name)|uniprotkb:At2g25930(locus name) psi-mi:elf4_arath(display_long)|uniprotkb:Protein ARRHYTHMIC 44(gene name synonym)|uniprotkb:T28M21.24(orf name)|uniprotkb:At2g40080(locus name)|uniprotkb:ELF4(gene name)|psi-mi:ELF4(display_short)|uniprotkb:ARR08(gene name synonym)|uniprotkb:ARR16(gene name synonym)|uniprotkb:ARR19(gene name synonym)|uniprotkb:ARR44(gene name synonym)|uniprotkb:ARR80(gene name synonym) psi-mi:"MI:0018"(two hybrid) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415204|imex:IM-26118-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0007623"(circadian rhythm)|go:"GO:0009409"(response to cold)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009733"(response to auxin)|go:"GO:0009737"(response to abscisic acid)|go:"GO:0005634"(nucleus)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010031"(circumnutation)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:2000028"(regulation of photoperiodism, flowering)|ensemblplants:AT2G25930(gene)|ensemblplants:AT2G25930.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|refseq:NP_180164.1|interpro:IPR039319 ensemblplants:AT2G40080(gene)|ensemblplants:AT2G40080.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009648"(photoperiodism)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0009908"(flower development)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010017"(red or far-red light signaling pathway)|go:"GO:0010114"(response to red light)|go:"GO:0042753"(positive regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048511"(rhythmic process)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0080167"(response to karrikin)|refseq:NP_565922.1|interpro:IPR009741(Protein of unknown function DUF1313)|interpro:IPR040462 - - - figure legend:1B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/09/11 2017/10/04 rogid:aqjvd7/HtcvS7pz64Vp0DltP3Xc3702 rogid:Qe2de5XZqO9WmXprF+WqRAhTuO43702 rigid:njGzIB8GXI7g1gDUGikcxUDj+OA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9SNB4 uniprotkb:O82804 intact:EBI-15406721|ensemblplants:AT3G46640.1|ensemblplants:AT3G46640.2|uniprotkb:B9DI71 intact:EBI-16415030|ensemblplants:AT2G25930.1|uniprotkb:O04419|uniprotkb:Q8L7A2 psi-mi:pcl1_arath(display_long)|uniprotkb:LUX(gene name)|psi-mi:LUX(display_short)|uniprotkb:PCL1(gene name synonym)|uniprotkb:Protein LUX ARRHYTHMO(gene name synonym)|uniprotkb:Protein PHYTOCLOCK 1(gene name synonym)|uniprotkb:F12A12.160(orf name)|uniprotkb:At3g46640(locus name) psi-mi:elf3_arath(display_long)|uniprotkb:Nematode-responsive protein(gene name synonym)|uniprotkb:ELF3(gene name)|psi-mi:ELF3(display_short)|uniprotkb:PYK20(gene name synonym)|uniprotkb:F17H15.25(orf name)|uniprotkb:T19L18.26(orf name)|uniprotkb:At2g25930(locus name) psi-mi:"MI:0018"(two hybrid) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415211|imex:IM-26118-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT3G46640(gene)|ensemblplants:AT3G46640.1(transcript)|ensemblplants:AT3G46640.2(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0007623"(circadian rhythm)|go:"GO:0042753"(positive regulation of circadian rhythm)|interpro:IPR044841|interpro:IPR006447(Myb-like DNA-binding region, SHAQKYF class)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017930|refseq:NP_001030823.1|refseq:NP_190248.1|rcsb pdb:6QEC|rcsb pdb:5LXU go:"GO:0007623"(circadian rhythm)|go:"GO:0009409"(response to cold)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009733"(response to auxin)|go:"GO:0009737"(response to abscisic acid)|go:"GO:0005634"(nucleus)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010031"(circumnutation)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:2000028"(regulation of photoperiodism, flowering)|ensemblplants:AT2G25930(gene)|ensemblplants:AT2G25930.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|refseq:NP_180164.1|interpro:IPR039319 - - - figure legend:1C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/09/11 2017/10/04 rogid:CUo/duDuOW6LQ6vNHS6Edtb8DyY3702 rogid:aqjvd7/HtcvS7pz64Vp0DltP3Xc3702 rigid:t1la+KMha/UZn/DeZi9hYB0YSl8 false sufficient binding region:143..144-c - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:O04211 uniprotkb:Q9SNB4 intact:EBI-16415004|ensemblplants:AT2G40080.1 intact:EBI-15406721|ensemblplants:AT3G46640.1|ensemblplants:AT3G46640.2|uniprotkb:B9DI71 psi-mi:elf4_arath(display_long)|uniprotkb:Protein ARRHYTHMIC 44(gene name synonym)|uniprotkb:T28M21.24(orf name)|uniprotkb:At2g40080(locus name)|uniprotkb:ELF4(gene name)|psi-mi:ELF4(display_short)|uniprotkb:ARR08(gene name synonym)|uniprotkb:ARR16(gene name synonym)|uniprotkb:ARR19(gene name synonym)|uniprotkb:ARR44(gene name synonym)|uniprotkb:ARR80(gene name synonym) psi-mi:pcl1_arath(display_long)|uniprotkb:LUX(gene name)|psi-mi:LUX(display_short)|uniprotkb:PCL1(gene name synonym)|uniprotkb:Protein LUX ARRHYTHMO(gene name synonym)|uniprotkb:Protein PHYTOCLOCK 1(gene name synonym)|uniprotkb:F12A12.160(orf name)|uniprotkb:At3g46640(locus name) psi-mi:"MI:0588"(three hybrid) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415247|imex:IM-26118-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT2G40080(gene)|ensemblplants:AT2G40080.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009648"(photoperiodism)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0009908"(flower development)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010017"(red or far-red light signaling pathway)|go:"GO:0010114"(response to red light)|go:"GO:0042753"(positive regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048511"(rhythmic process)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0080167"(response to karrikin)|refseq:NP_565922.1|interpro:IPR009741(Protein of unknown function DUF1313)|interpro:IPR040462 ensemblplants:AT3G46640(gene)|ensemblplants:AT3G46640.1(transcript)|ensemblplants:AT3G46640.2(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0007623"(circadian rhythm)|go:"GO:0042753"(positive regulation of circadian rhythm)|interpro:IPR044841|interpro:IPR006447(Myb-like DNA-binding region, SHAQKYF class)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017930|refseq:NP_001030823.1|refseq:NP_190248.1|rcsb pdb:6QEC|rcsb pdb:5LXU - - - figure legend:1D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/09/11 2017/09/14 rogid:Qe2de5XZqO9WmXprF+WqRAhTuO43702 rogid:CUo/duDuOW6LQ6vNHS6Edtb8DyY3702 rigid:2l3MiGbBIrk+RMPIixFo5IsNfJ4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:O04211 uniprotkb:O82804 intact:EBI-16415004|ensemblplants:AT2G40080.1 intact:EBI-16415030|ensemblplants:AT2G25930.1|uniprotkb:O04419|uniprotkb:Q8L7A2 psi-mi:elf4_arath(display_long)|uniprotkb:Protein ARRHYTHMIC 44(gene name synonym)|uniprotkb:T28M21.24(orf name)|uniprotkb:At2g40080(locus name)|uniprotkb:ELF4(gene name)|psi-mi:ELF4(display_short)|uniprotkb:ARR08(gene name synonym)|uniprotkb:ARR16(gene name synonym)|uniprotkb:ARR19(gene name synonym)|uniprotkb:ARR44(gene name synonym)|uniprotkb:ARR80(gene name synonym) psi-mi:elf3_arath(display_long)|uniprotkb:Nematode-responsive protein(gene name synonym)|uniprotkb:ELF3(gene name)|psi-mi:ELF3(display_short)|uniprotkb:PYK20(gene name synonym)|uniprotkb:F17H15.25(orf name)|uniprotkb:T19L18.26(orf name)|uniprotkb:At2g25930(locus name) psi-mi:"MI:0588"(three hybrid) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415247|imex:IM-26118-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT2G40080(gene)|ensemblplants:AT2G40080.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009648"(photoperiodism)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0009908"(flower development)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010017"(red or far-red light signaling pathway)|go:"GO:0010114"(response to red light)|go:"GO:0042753"(positive regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048511"(rhythmic process)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0080167"(response to karrikin)|refseq:NP_565922.1|interpro:IPR009741(Protein of unknown function DUF1313)|interpro:IPR040462 go:"GO:0007623"(circadian rhythm)|go:"GO:0009409"(response to cold)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009733"(response to auxin)|go:"GO:0009737"(response to abscisic acid)|go:"GO:0005634"(nucleus)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010031"(circumnutation)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:2000028"(regulation of photoperiodism, flowering)|ensemblplants:AT2G25930(gene)|ensemblplants:AT2G25930.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|refseq:NP_180164.1|interpro:IPR039319 - - - figure legend:1D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/09/11 2017/09/14 rogid:Qe2de5XZqO9WmXprF+WqRAhTuO43702 rogid:aqjvd7/HtcvS7pz64Vp0DltP3Xc3702 rigid:2l3MiGbBIrk+RMPIixFo5IsNfJ4 false - flag tag:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:O04211 uniprotkb:Q9LTH4 intact:EBI-16415004|ensemblplants:AT2G40080.1 intact:EBI-15197663|ensemblplants:AT5G59570.1|ensemblplants:AT5G59570.2|uniprotkb:Q8LA15 psi-mi:elf4_arath(display_long)|uniprotkb:Protein ARRHYTHMIC 44(gene name synonym)|uniprotkb:T28M21.24(orf name)|uniprotkb:At2g40080(locus name)|uniprotkb:ELF4(gene name)|psi-mi:ELF4(display_short)|uniprotkb:ARR08(gene name synonym)|uniprotkb:ARR16(gene name synonym)|uniprotkb:ARR19(gene name synonym)|uniprotkb:ARR44(gene name synonym)|uniprotkb:ARR80(gene name synonym) psi-mi:pcll_arath(display_long)|uniprotkb:BOA(gene name)|psi-mi:BOA(display_short)|uniprotkb:PCLL(gene name synonym)|uniprotkb:Protein BROTHER OF LUX ARRHYTHMO(gene name synonym)|uniprotkb:Protein PHYTOCLOCK 1-like(gene name synonym)|uniprotkb:F2O15.230(orf name)|uniprotkb:At5g59570(locus name) psi-mi:"MI:0588"(three hybrid) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415475|imex:IM-26118-25 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT2G40080(gene)|ensemblplants:AT2G40080.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009648"(photoperiodism)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0009908"(flower development)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010017"(red or far-red light signaling pathway)|go:"GO:0010114"(response to red light)|go:"GO:0042753"(positive regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048511"(rhythmic process)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0080167"(response to karrikin)|refseq:NP_565922.1|interpro:IPR009741(Protein of unknown function DUF1313)|interpro:IPR040462 interpro:IPR044841|ensemblplants:AT5G59570(gene)|ensemblplants:AT5G59570.1(transcript)|ensemblplants:AT5G59570.2(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009909"(regulation of flower development)|interpro:IPR006447(Myb-like DNA-binding region, SHAQKYF class)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017930|refseq:NP_001331374.1|refseq:NP_200765.1 - - - figure legend:Supp 10A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/09/11 2017/09/14 rogid:Qe2de5XZqO9WmXprF+WqRAhTuO43702 rogid:cVrLBXOjPc2vLJgDPEynr1e3M583702 rigid:ON4rQTP+3tU3B2ES/B/r2MAYtok false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:O04211 uniprotkb:O82804 intact:EBI-16415004|ensemblplants:AT2G40080.1 intact:EBI-16415030|ensemblplants:AT2G25930.1|uniprotkb:O04419|uniprotkb:Q8L7A2 psi-mi:elf4_arath(display_long)|uniprotkb:Protein ARRHYTHMIC 44(gene name synonym)|uniprotkb:T28M21.24(orf name)|uniprotkb:At2g40080(locus name)|uniprotkb:ELF4(gene name)|psi-mi:ELF4(display_short)|uniprotkb:ARR08(gene name synonym)|uniprotkb:ARR16(gene name synonym)|uniprotkb:ARR19(gene name synonym)|uniprotkb:ARR44(gene name synonym)|uniprotkb:ARR80(gene name synonym) psi-mi:elf3_arath(display_long)|uniprotkb:Nematode-responsive protein(gene name synonym)|uniprotkb:ELF3(gene name)|psi-mi:ELF3(display_short)|uniprotkb:PYK20(gene name synonym)|uniprotkb:F17H15.25(orf name)|uniprotkb:T19L18.26(orf name)|uniprotkb:At2g25930(locus name) psi-mi:"MI:0588"(three hybrid) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415475|imex:IM-26118-25 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT2G40080(gene)|ensemblplants:AT2G40080.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009648"(photoperiodism)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0009908"(flower development)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010017"(red or far-red light signaling pathway)|go:"GO:0010114"(response to red light)|go:"GO:0042753"(positive regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048511"(rhythmic process)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0080167"(response to karrikin)|refseq:NP_565922.1|interpro:IPR009741(Protein of unknown function DUF1313)|interpro:IPR040462 go:"GO:0007623"(circadian rhythm)|go:"GO:0009409"(response to cold)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009733"(response to auxin)|go:"GO:0009737"(response to abscisic acid)|go:"GO:0005634"(nucleus)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010031"(circumnutation)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:2000028"(regulation of photoperiodism, flowering)|ensemblplants:AT2G25930(gene)|ensemblplants:AT2G25930.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|refseq:NP_180164.1|interpro:IPR039319 - - - figure legend:Supp 10A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/09/11 2017/09/14 rogid:Qe2de5XZqO9WmXprF+WqRAhTuO43702 rogid:aqjvd7/HtcvS7pz64Vp0DltP3Xc3702 rigid:ON4rQTP+3tU3B2ES/B/r2MAYtok false - flag tag:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:O04211 uniprotkb:Q9SNB4 intact:EBI-16415004|ensemblplants:AT2G40080.1 intact:EBI-15406721|ensemblplants:AT3G46640.1|ensemblplants:AT3G46640.2|uniprotkb:B9DI71 psi-mi:elf4_arath(display_long)|uniprotkb:Protein ARRHYTHMIC 44(gene name synonym)|uniprotkb:T28M21.24(orf name)|uniprotkb:At2g40080(locus name)|uniprotkb:ELF4(gene name)|psi-mi:ELF4(display_short)|uniprotkb:ARR08(gene name synonym)|uniprotkb:ARR16(gene name synonym)|uniprotkb:ARR19(gene name synonym)|uniprotkb:ARR44(gene name synonym)|uniprotkb:ARR80(gene name synonym) psi-mi:pcl1_arath(display_long)|uniprotkb:LUX(gene name)|psi-mi:LUX(display_short)|uniprotkb:PCL1(gene name synonym)|uniprotkb:Protein LUX ARRHYTHMO(gene name synonym)|uniprotkb:Protein PHYTOCLOCK 1(gene name synonym)|uniprotkb:F12A12.160(orf name)|uniprotkb:At3g46640(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415262|imex:IM-26118-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT2G40080(gene)|ensemblplants:AT2G40080.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009648"(photoperiodism)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0009908"(flower development)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010017"(red or far-red light signaling pathway)|go:"GO:0010114"(response to red light)|go:"GO:0042753"(positive regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048511"(rhythmic process)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0080167"(response to karrikin)|refseq:NP_565922.1|interpro:IPR009741(Protein of unknown function DUF1313)|interpro:IPR040462 ensemblplants:AT3G46640(gene)|ensemblplants:AT3G46640.1(transcript)|ensemblplants:AT3G46640.2(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0007623"(circadian rhythm)|go:"GO:0042753"(positive regulation of circadian rhythm)|interpro:IPR044841|interpro:IPR006447(Myb-like DNA-binding region, SHAQKYF class)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017930|refseq:NP_001030823.1|refseq:NP_190248.1|rcsb pdb:6QEC|rcsb pdb:5LXU - - - figure legend:Figure 2, Supp fig 2F/Fig 6|comment:The presence of ELF3 is necessary for the co-immunoprecipitation of LUX by ELF4–HA.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2017/09/11 2017/09/14 rogid:Qe2de5XZqO9WmXprF+WqRAhTuO43702 rogid:CUo/duDuOW6LQ6vNHS6Edtb8DyY3702 rigid:2l3MiGbBIrk+RMPIixFo5IsNfJ4 false ha tag:c-c - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:O04211 uniprotkb:O82804 intact:EBI-16415004|ensemblplants:AT2G40080.1 intact:EBI-16415030|ensemblplants:AT2G25930.1|uniprotkb:O04419|uniprotkb:Q8L7A2 psi-mi:elf4_arath(display_long)|uniprotkb:Protein ARRHYTHMIC 44(gene name synonym)|uniprotkb:T28M21.24(orf name)|uniprotkb:At2g40080(locus name)|uniprotkb:ELF4(gene name)|psi-mi:ELF4(display_short)|uniprotkb:ARR08(gene name synonym)|uniprotkb:ARR16(gene name synonym)|uniprotkb:ARR19(gene name synonym)|uniprotkb:ARR44(gene name synonym)|uniprotkb:ARR80(gene name synonym) psi-mi:elf3_arath(display_long)|uniprotkb:Nematode-responsive protein(gene name synonym)|uniprotkb:ELF3(gene name)|psi-mi:ELF3(display_short)|uniprotkb:PYK20(gene name synonym)|uniprotkb:F17H15.25(orf name)|uniprotkb:T19L18.26(orf name)|uniprotkb:At2g25930(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415262|imex:IM-26118-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT2G40080(gene)|ensemblplants:AT2G40080.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009648"(photoperiodism)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0009908"(flower development)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010017"(red or far-red light signaling pathway)|go:"GO:0010114"(response to red light)|go:"GO:0042753"(positive regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048511"(rhythmic process)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0080167"(response to karrikin)|refseq:NP_565922.1|interpro:IPR009741(Protein of unknown function DUF1313)|interpro:IPR040462 go:"GO:0007623"(circadian rhythm)|go:"GO:0009409"(response to cold)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009733"(response to auxin)|go:"GO:0009737"(response to abscisic acid)|go:"GO:0005634"(nucleus)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010031"(circumnutation)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:2000028"(regulation of photoperiodism, flowering)|ensemblplants:AT2G25930(gene)|ensemblplants:AT2G25930.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|refseq:NP_180164.1|interpro:IPR039319 - - - figure legend:Figure 2, Supp fig 2F/Fig 6|comment:The presence of ELF3 is necessary for the co-immunoprecipitation of LUX by ELF4–HA.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2017/09/11 2017/09/14 rogid:Qe2de5XZqO9WmXprF+WqRAhTuO43702 rogid:aqjvd7/HtcvS7pz64Vp0DltP3Xc3702 rigid:2l3MiGbBIrk+RMPIixFo5IsNfJ4 false ha tag:c-c - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9SNB4 ensemblgenomes:AT3G59060 intact:EBI-15406721|ensemblplants:AT3G46640.1|ensemblplants:AT3G46640.2|uniprotkb:B9DI71 intact:EBI-16415364 psi-mi:pcl1_arath(display_long)|uniprotkb:LUX(gene name)|psi-mi:LUX(display_short)|uniprotkb:PCL1(gene name synonym)|uniprotkb:Protein LUX ARRHYTHMO(gene name synonym)|uniprotkb:Protein PHYTOCLOCK 1(gene name synonym)|uniprotkb:F12A12.160(orf name)|uniprotkb:At3g46640(locus name) psi-mi:pif5_arath_gene(display_short)|psi-mi:AT3G59060(display_long) psi-mi:"MI:0432"(one hybrid) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415360|imex:IM-26118-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0250"(gene) ensemblplants:AT3G46640(gene)|ensemblplants:AT3G46640.1(transcript)|ensemblplants:AT3G46640.2(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0007623"(circadian rhythm)|go:"GO:0042753"(positive regulation of circadian rhythm)|interpro:IPR044841|interpro:IPR006447(Myb-like DNA-binding region, SHAQKYF class)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017930|refseq:NP_001030823.1|refseq:NP_190248.1|rcsb pdb:6QEC|rcsb pdb:5LXU - - - - figure legend:3C|comment:"LUX binding to the PIF5 promoter (from −481 to +13 base pairs) was lost when the consensus LBS was mutated."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/09/11 2017/09/13 rogid:CUo/duDuOW6LQ6vNHS6Edtb8DyY3702 - - false - sufficient binding region:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9SNB4 ensemblgenomes:AT2G43010 intact:EBI-15406721|ensemblplants:AT3G46640.1|ensemblplants:AT3G46640.2|uniprotkb:B9DI71 intact:EBI-16415375 psi-mi:pcl1_arath(display_long)|uniprotkb:LUX(gene name)|psi-mi:LUX(display_short)|uniprotkb:PCL1(gene name synonym)|uniprotkb:Protein LUX ARRHYTHMO(gene name synonym)|uniprotkb:Protein PHYTOCLOCK 1(gene name synonym)|uniprotkb:F12A12.160(orf name)|uniprotkb:At3g46640(locus name) psi-mi:pif4_arath_gene(display_short)|psi-mi:AT2G43010(display_long) psi-mi:"MI:0432"(one hybrid) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415381|imex:IM-26118-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0250"(gene) ensemblplants:AT3G46640(gene)|ensemblplants:AT3G46640.1(transcript)|ensemblplants:AT3G46640.2(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0007623"(circadian rhythm)|go:"GO:0042753"(positive regulation of circadian rhythm)|interpro:IPR044841|interpro:IPR006447(Myb-like DNA-binding region, SHAQKYF class)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017930|refseq:NP_001030823.1|refseq:NP_190248.1|rcsb pdb:6QEC|rcsb pdb:5LXU - - - - figure legend:3C-2|comment:"LUX binding to the PIF5 promoter (from −481 to +13 base pairs) was lost when the consensus LBS was mutated."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/09/11 2017/09/13 rogid:CUo/duDuOW6LQ6vNHS6Edtb8DyY3702 - - false - sufficient binding region:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9SNB4 ensemblgenomes:AT2G43010 intact:EBI-15406721|ensemblplants:AT3G46640.1|ensemblplants:AT3G46640.2|uniprotkb:B9DI71 intact:EBI-16415375 psi-mi:pcl1_arath(display_long)|uniprotkb:LUX(gene name)|psi-mi:LUX(display_short)|uniprotkb:PCL1(gene name synonym)|uniprotkb:Protein LUX ARRHYTHMO(gene name synonym)|uniprotkb:Protein PHYTOCLOCK 1(gene name synonym)|uniprotkb:F12A12.160(orf name)|uniprotkb:At3g46640(locus name) psi-mi:pif4_arath_gene(display_short)|psi-mi:AT2G43010(display_long) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415398|imex:IM-26118-12 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0250"(gene) ensemblplants:AT3G46640(gene)|ensemblplants:AT3G46640.1(transcript)|ensemblplants:AT3G46640.2(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0007623"(circadian rhythm)|go:"GO:0042753"(positive regulation of circadian rhythm)|interpro:IPR044841|interpro:IPR006447(Myb-like DNA-binding region, SHAQKYF class)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017930|refseq:NP_001030823.1|refseq:NP_190248.1|rcsb pdb:6QEC|rcsb pdb:5LXU - - - - figure legend:3D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2017/09/11 2017/09/13 rogid:CUo/duDuOW6LQ6vNHS6Edtb8DyY3702 - - false green fluorescent protein tag:c-c sufficient binding region:?-? - - psi-mi:"MI:1195"(quantitative pcr) psi-mi:"MI:1195"(quantitative pcr) uniprotkb:O82804 ensemblgenomes:AT2G43010 intact:EBI-16415030|ensemblplants:AT2G25930.1|uniprotkb:O04419|uniprotkb:Q8L7A2 intact:EBI-16415375 psi-mi:elf3_arath(display_long)|uniprotkb:Nematode-responsive protein(gene name synonym)|uniprotkb:ELF3(gene name)|psi-mi:ELF3(display_short)|uniprotkb:PYK20(gene name synonym)|uniprotkb:F17H15.25(orf name)|uniprotkb:T19L18.26(orf name)|uniprotkb:At2g25930(locus name) psi-mi:pif4_arath_gene(display_short)|psi-mi:AT2G43010(display_long) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415407|imex:IM-26118-14 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0250"(gene) go:"GO:0007623"(circadian rhythm)|go:"GO:0009409"(response to cold)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009733"(response to auxin)|go:"GO:0009737"(response to abscisic acid)|go:"GO:0005634"(nucleus)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010031"(circumnutation)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:2000028"(regulation of photoperiodism, flowering)|ensemblplants:AT2G25930(gene)|ensemblplants:AT2G25930.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|refseq:NP_180164.1|interpro:IPR039319 - - - - figure legend:3E, 3G, supp fig 8/9|comment:ELF3 did not bind when NOX and LUX genes were silenced.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2017/09/11 2017/09/12 rogid:aqjvd7/HtcvS7pz64Vp0DltP3Xc3702 - - false green fluorescent protein tag:c-c sufficient binding region:?-? - - psi-mi:"MI:1195"(quantitative pcr) psi-mi:"MI:1195"(quantitative pcr) uniprotkb:O04211 ensemblgenomes:AT2G43010 intact:EBI-16415004|ensemblplants:AT2G40080.1 intact:EBI-16415375 psi-mi:elf4_arath(display_long)|uniprotkb:Protein ARRHYTHMIC 44(gene name synonym)|uniprotkb:T28M21.24(orf name)|uniprotkb:At2g40080(locus name)|uniprotkb:ELF4(gene name)|psi-mi:ELF4(display_short)|uniprotkb:ARR08(gene name synonym)|uniprotkb:ARR16(gene name synonym)|uniprotkb:ARR19(gene name synonym)|uniprotkb:ARR44(gene name synonym)|uniprotkb:ARR80(gene name synonym) psi-mi:pif4_arath_gene(display_short)|psi-mi:AT2G43010(display_long) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415415|imex:IM-26118-16 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0250"(gene) ensemblplants:AT2G40080(gene)|ensemblplants:AT2G40080.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009648"(photoperiodism)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0009908"(flower development)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010017"(red or far-red light signaling pathway)|go:"GO:0010114"(response to red light)|go:"GO:0042753"(positive regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048511"(rhythmic process)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0080167"(response to karrikin)|refseq:NP_565922.1|interpro:IPR009741(Protein of unknown function DUF1313)|interpro:IPR040462 - - - - figure legend:3F|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2017/09/11 2017/09/14 rogid:Qe2de5XZqO9WmXprF+WqRAhTuO43702 - - false ha tag:c-c sufficient binding region:?-? - - psi-mi:"MI:1195"(quantitative pcr) psi-mi:"MI:1195"(quantitative pcr) uniprotkb:O04211 ensemblgenomes:AT3G59060 intact:EBI-16415004|ensemblplants:AT2G40080.1 intact:EBI-16415364 psi-mi:elf4_arath(display_long)|uniprotkb:Protein ARRHYTHMIC 44(gene name synonym)|uniprotkb:T28M21.24(orf name)|uniprotkb:At2g40080(locus name)|uniprotkb:ELF4(gene name)|psi-mi:ELF4(display_short)|uniprotkb:ARR08(gene name synonym)|uniprotkb:ARR16(gene name synonym)|uniprotkb:ARR19(gene name synonym)|uniprotkb:ARR44(gene name synonym)|uniprotkb:ARR80(gene name synonym) psi-mi:pif5_arath_gene(display_short)|psi-mi:AT3G59060(display_long) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415424|imex:IM-26118-18 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0250"(gene) ensemblplants:AT2G40080(gene)|ensemblplants:AT2G40080.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009648"(photoperiodism)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0009908"(flower development)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010017"(red or far-red light signaling pathway)|go:"GO:0010114"(response to red light)|go:"GO:0042753"(positive regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048511"(rhythmic process)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0080167"(response to karrikin)|refseq:NP_565922.1|interpro:IPR009741(Protein of unknown function DUF1313)|interpro:IPR040462 - - - - figure legend:3F-2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2017/09/11 2017/09/14 rogid:Qe2de5XZqO9WmXprF+WqRAhTuO43702 - - false ha tag:c-c sufficient binding region:?-? - - psi-mi:"MI:1195"(quantitative pcr) psi-mi:"MI:1195"(quantitative pcr) uniprotkb:Q9SNB4 ensemblgenomes:AT3G59060 intact:EBI-15406721|ensemblplants:AT3G46640.1|ensemblplants:AT3G46640.2|uniprotkb:B9DI71 intact:EBI-16415364 psi-mi:pcl1_arath(display_long)|uniprotkb:LUX(gene name)|psi-mi:LUX(display_short)|uniprotkb:PCL1(gene name synonym)|uniprotkb:Protein LUX ARRHYTHMO(gene name synonym)|uniprotkb:Protein PHYTOCLOCK 1(gene name synonym)|uniprotkb:F12A12.160(orf name)|uniprotkb:At3g46640(locus name) psi-mi:pif5_arath_gene(display_short)|psi-mi:AT3G59060(display_long) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415437|imex:IM-26118-20 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0250"(gene) ensemblplants:AT3G46640(gene)|ensemblplants:AT3G46640.1(transcript)|ensemblplants:AT3G46640.2(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0007623"(circadian rhythm)|go:"GO:0042753"(positive regulation of circadian rhythm)|interpro:IPR044841|interpro:IPR006447(Myb-like DNA-binding region, SHAQKYF class)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017930|refseq:NP_001030823.1|refseq:NP_190248.1|rcsb pdb:6QEC|rcsb pdb:5LXU - - - - figure legend:3D-2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2017/09/11 2017/09/13 rogid:CUo/duDuOW6LQ6vNHS6Edtb8DyY3702 - - false green fluorescent protein tag:c-c sufficient binding region:?-? - - psi-mi:"MI:1195"(quantitative pcr) psi-mi:"MI:1195"(quantitative pcr) uniprotkb:O82804 ensemblgenomes:AT3G59060 intact:EBI-16415030|ensemblplants:AT2G25930.1|uniprotkb:O04419|uniprotkb:Q8L7A2 intact:EBI-16415364 psi-mi:elf3_arath(display_long)|uniprotkb:Nematode-responsive protein(gene name synonym)|uniprotkb:ELF3(gene name)|psi-mi:ELF3(display_short)|uniprotkb:PYK20(gene name synonym)|uniprotkb:F17H15.25(orf name)|uniprotkb:T19L18.26(orf name)|uniprotkb:At2g25930(locus name) psi-mi:pif5_arath_gene(display_short)|psi-mi:AT3G59060(display_long) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Nusinow et al. (2011) pubmed:21753751|imex:IM-26118 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-16415445|imex:IM-26118-22 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0250"(gene) go:"GO:0007623"(circadian rhythm)|go:"GO:0009409"(response to cold)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009733"(response to auxin)|go:"GO:0009737"(response to abscisic acid)|go:"GO:0005634"(nucleus)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0009909"(regulation of flower development)|go:"GO:0010031"(circumnutation)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:2000028"(regulation of photoperiodism, flowering)|ensemblplants:AT2G25930(gene)|ensemblplants:AT2G25930.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|refseq:NP_180164.1|interpro:IPR039319 - - - - figure legend:3E, 3G, supp fig 8/9|comment:ELF3 did not bind when NOX and LUX genes were silenced.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2017/09/11 2017/09/12 rogid:aqjvd7/HtcvS7pz64Vp0DltP3Xc3702 - - false green fluorescent protein tag:c-c sufficient binding region:?-? - - psi-mi:"MI:1195"(quantitative pcr) psi-mi:"MI:1195"(quantitative pcr)