#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:O81098 uniprotkb:P18616 intact:EBI-2312459|ensemblplants:AT3G22320.1 intact:EBI-1540537|uniprotkb:P31635|uniprotkb:Q9SZS8|uniprotkb:Q56Z04|ensemblplants:AT4G35800.1|ensemblplants:AT4G35800.2 psi-mi:rpb5a_arath(display_long)|uniprotkb:NRPB5A(gene name)|psi-mi:NRPB5A(display_short)|uniprotkb:DNA-directed RNA polymerase II subunit E(gene name synonym)|uniprotkb:NRPD5A(gene name synonym)|uniprotkb:RNA polymerase I, II and III 24.3 kDa subunit(gene name synonym)|uniprotkb:RPABC24.3(gene name synonym)|uniprotkb:MCB17.4(orf name)|uniprotkb:MCB17_5(orf name)|uniprotkb:At3g22320(locus name) psi-mi:nrpb1_arath(display_long)|uniprotkb:DNA-directed RNA polymerase II largest subunit(gene name synonym)|uniprotkb:DNA-directed RNA polymerase II subunit 1(gene name synonym)|uniprotkb:NRPB1(gene name)|psi-mi:NRPB1(display_short)|uniprotkb:RPB1(gene name synonym)|uniprotkb:RPB205(gene name synonym)|uniprotkb:RPII(gene name synonym)|uniprotkb:F4B14.70(orf name)|uniprotkb:At4g35800(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Lahmy et al. (2009) pubmed:19141635|doi:10.1073/pnas.0810310106|imex:IM-14553 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-15751342|imex:IM-14553-1|dip:DIP-103467E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_188871.1|dip:DIP-48677N|ensemblplants:AT3G22320(gene)|ensemblplants:AT3G22320.1(transcript)|go:"GO:0000418"(RNA polymerase IV complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0006351"(transcription, DNA-templated)|interpro:IPR000783(RNA polymerase, subunit H/Rpb5 C-terminal)|interpro:IPR005571(RNA polymerase, Rpb5, N-terminal)|interpro:IPR014381(DNA-directed RNA polymerase, RPB5 subunit)|interpro:IPR020608|interpro:IPR020609|interpro:IPR035913|interpro:IPR036710|interpro:IPR039531 refseq:NP_195305.2|refseq:NP_001329346.1|dip:DIP-40008N|ensemblplants:AT4G35800(gene)|ensemblplants:AT4G35800.1(transcript)|ensemblplants:AT4G35800.2(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005773"(vacuole)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0009506"(plasmodesma)|go:"GO:0046872"(metal ion binding)|interpro:IPR000684(RNA polymerase II, heptapeptide repeat, eukaryotic)|interpro:IPR000722(RNA polymerase, alpha subunit)|interpro:IPR006592(RNA polymerase, N-terminal)|interpro:IPR007066(RNA polymerase Rpb1, domain 3)|interpro:IPR007073(RNA polymerase Rpb1, domain 7)|interpro:IPR007075(RNA polymerase Rpb1, domain 6)|interpro:IPR007080(RNA polymerase Rpb1, domain 1)|interpro:IPR007081(RNA polymerase Rpb1, domain 5)|interpro:IPR007083(RNA polymerase Rpb1, domain 4)|interpro:IPR038120|interpro:IPR038593|interpro:IPR042102 psi-mi:"MI:0465"(dip) - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/08/06 2017/08/10 rogid:rS85PQGMv2PdHZbFgmt1sJunKuI3702 rogid:d+KJYil9+hodjkCjOaNefD/uBDo3702 rigid:r+Bjti7Xelgjc0XIQxrQF6KHHPY false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9M1J2 uniprotkb:Q5D869 intact:EBI-15751359|ensemblplants:AT3G57080.1 intact:EBI-2352263|uniprotkb:O04206|uniprotkb:O04207|uniprotkb:Q1L5X4|ensemblplants:AT2G40030.1 psi-mi:rpe5a_arath(display_long)|uniprotkb:NRPE5A(gene name)|psi-mi:NRPE5A(display_short)|uniprotkb:RPB23.7(gene name synonym)|uniprotkb:RPB5b(gene name synonym)|uniprotkb:F24I3.160(orf name)|uniprotkb:At3g57080(locus name) psi-mi:nrpe1_arath(display_long)|uniprotkb:NRPE1(gene name)|psi-mi:NRPE1(display_short)|uniprotkb:DMS5(gene name synonym)|uniprotkb:At2g40030(locus name)|uniprotkb:DRD3(gene name synonym)|uniprotkb:NRPD1b(gene name synonym)|uniprotkb:RMD1(gene name synonym)|uniprotkb:RPE1(gene name synonym)|uniprotkb:DNA-directed RNA polymerase D subunit 1b(gene name synonym)|uniprotkb:Protein DEFECTIVE IN MERISTEM SILENCING 5(gene name synonym)|uniprotkb:Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 3(gene name synonym)|uniprotkb:Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 1(gene name synonym)|uniprotkb:RNA polymerase IV subunit 1(gene name synonym)|uniprotkb:T28M21.19(orf name)|uniprotkb:DNA-directed RNA polymerase E subunit 1(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Lahmy et al. (2009) pubmed:19141635|doi:10.1073/pnas.0810310106|imex:IM-14553 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-15751394|imex:IM-14553-2|dip:DIP-103468E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT3G57080(gene)|ensemblplants:AT3G57080.1(transcript)|go:"GO:0000419"(RNA polymerase V complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|interpro:IPR000783(RNA polymerase, subunit H/Rpb5 C-terminal)|interpro:IPR005571(RNA polymerase, Rpb5, N-terminal)|interpro:IPR014381(DNA-directed RNA polymerase, RPB5 subunit)|interpro:IPR035913|interpro:IPR036710|interpro:IPR039531|refseq:NP_191267.1|dip:DIP-48680N refseq:NP_181532.2|dip:DIP-48678N|ensemblplants:AT2G40030(gene)|ensemblplants:AT2G40030.1(transcript)|go:"GO:0000419"(RNA polymerase V complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006306"(DNA methylation)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0016604"(nuclear body)|go:"GO:0030422"(production of siRNA involved in RNA interference)|go:"GO:0035194"(post-transcriptional gene silencing by RNA)|go:"GO:0046872"(metal ion binding)|go:"GO:0050832"(defense response to fungus)|interpro:IPR000722(RNA polymerase, alpha subunit)|interpro:IPR006592(RNA polymerase, N-terminal)|interpro:IPR007066(RNA polymerase Rpb1, domain 3)|interpro:IPR007081(RNA polymerase Rpb1, domain 5)|interpro:IPR040402|interpro:IPR040403|interpro:IPR042102 psi-mi:"MI:0465"(dip) - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/08/06 2017/08/10 rogid:MU7/tXAtYsKN1u1XXpZjfWfiNe83702 rogid:6ybhh5BEMBi/ieZFd4n7wFyWr/E3702 rigid:wKXfO1XUMdEIQXzUekWd6b30VFo false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9M1J2 uniprotkb:Q5D869 intact:EBI-15751359|ensemblplants:AT3G57080.1 intact:EBI-2352263|uniprotkb:O04206|uniprotkb:O04207|uniprotkb:Q1L5X4|ensemblplants:AT2G40030.1 psi-mi:rpe5a_arath(display_long)|uniprotkb:NRPE5A(gene name)|psi-mi:NRPE5A(display_short)|uniprotkb:RPB23.7(gene name synonym)|uniprotkb:RPB5b(gene name synonym)|uniprotkb:F24I3.160(orf name)|uniprotkb:At3g57080(locus name) psi-mi:nrpe1_arath(display_long)|uniprotkb:NRPE1(gene name)|psi-mi:NRPE1(display_short)|uniprotkb:DMS5(gene name synonym)|uniprotkb:At2g40030(locus name)|uniprotkb:DRD3(gene name synonym)|uniprotkb:NRPD1b(gene name synonym)|uniprotkb:RMD1(gene name synonym)|uniprotkb:RPE1(gene name synonym)|uniprotkb:DNA-directed RNA polymerase D subunit 1b(gene name synonym)|uniprotkb:Protein DEFECTIVE IN MERISTEM SILENCING 5(gene name synonym)|uniprotkb:Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 3(gene name synonym)|uniprotkb:Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 1(gene name synonym)|uniprotkb:RNA polymerase IV subunit 1(gene name synonym)|uniprotkb:T28M21.19(orf name)|uniprotkb:DNA-directed RNA polymerase E subunit 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lahmy et al. (2009) pubmed:19141635|doi:10.1073/pnas.0810310106|imex:IM-14553 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-15751411|imex:IM-14553-3|dip:DIP-103468E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT3G57080(gene)|ensemblplants:AT3G57080.1(transcript)|go:"GO:0000419"(RNA polymerase V complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|interpro:IPR000783(RNA polymerase, subunit H/Rpb5 C-terminal)|interpro:IPR005571(RNA polymerase, Rpb5, N-terminal)|interpro:IPR014381(DNA-directed RNA polymerase, RPB5 subunit)|interpro:IPR035913|interpro:IPR036710|interpro:IPR039531|refseq:NP_191267.1|dip:DIP-48680N refseq:NP_181532.2|dip:DIP-48678N|ensemblplants:AT2G40030(gene)|ensemblplants:AT2G40030.1(transcript)|go:"GO:0000419"(RNA polymerase V complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006306"(DNA methylation)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0016604"(nuclear body)|go:"GO:0030422"(production of siRNA involved in RNA interference)|go:"GO:0035194"(post-transcriptional gene silencing by RNA)|go:"GO:0046872"(metal ion binding)|go:"GO:0050832"(defense response to fungus)|interpro:IPR000722(RNA polymerase, alpha subunit)|interpro:IPR006592(RNA polymerase, N-terminal)|interpro:IPR007066(RNA polymerase Rpb1, domain 3)|interpro:IPR007081(RNA polymerase Rpb1, domain 5)|interpro:IPR040402|interpro:IPR040403|interpro:IPR042102 psi-mi:"MI:0465"(dip) - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/08/06 2017/08/10 rogid:MU7/tXAtYsKN1u1XXpZjfWfiNe83702 rogid:6ybhh5BEMBi/ieZFd4n7wFyWr/E3702 rigid:wKXfO1XUMdEIQXzUekWd6b30VFo false - flag tag:c-c - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9LQ02 uniprotkb:O81098 intact:EBI-15751430|ensemblplants:AT1G63020.1|ensemblplants:AT1G63020.2 intact:EBI-2312459|ensemblplants:AT3G22320.1 psi-mi:nrpd1_arath(display_long)|uniprotkb:NRPD1(gene name)|psi-mi:NRPD1(display_short)|uniprotkb:NRPD1a(gene name synonym)|uniprotkb:RMD3(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDE4(gene name synonym)|uniprotkb:SMD2(gene name synonym)|uniprotkb:F16M19.19(orf name)|uniprotkb:F16P17.19(orf name)|uniprotkb:At1g63020(locus name)|uniprotkb:DNA-directed RNA polymerase D subunit 1(gene name synonym)|uniprotkb:Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 3(gene name synonym)|uniprotkb:Protein SILENCING DEFECTIVE 4(gene name synonym)|uniprotkb:Protein SILENCING MOVEMENT DEFICIENT 2(gene name synonym)|uniprotkb:RNA polymerase IV subunit 1a(gene name synonym) psi-mi:rpb5a_arath(display_long)|uniprotkb:NRPB5A(gene name)|psi-mi:NRPB5A(display_short)|uniprotkb:DNA-directed RNA polymerase II subunit E(gene name synonym)|uniprotkb:NRPD5A(gene name synonym)|uniprotkb:RNA polymerase I, II and III 24.3 kDa subunit(gene name synonym)|uniprotkb:RPABC24.3(gene name synonym)|uniprotkb:MCB17.4(orf name)|uniprotkb:MCB17_5(orf name)|uniprotkb:At3g22320(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lahmy et al. (2009) pubmed:19141635|doi:10.1073/pnas.0810310106|imex:IM-14553 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-15751470|imex:IM-14553-4|dip:DIP-103469E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT1G63020(gene)|ensemblplants:AT1G63020.1(transcript)|ensemblplants:AT1G63020.2(transcript)|go:"GO:0000418"(RNA polymerase IV complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0010495"(long-distance posttranscriptional gene silencing)|go:"GO:0030422"(production of siRNA involved in RNA interference)|go:"GO:0031047"(gene silencing by RNA)|go:"GO:0046872"(metal ion binding)|interpro:IPR000722(RNA polymerase, alpha subunit)|interpro:IPR006592(RNA polymerase, N-terminal)|interpro:IPR007066(RNA polymerase Rpb1, domain 3)|interpro:IPR007083(RNA polymerase Rpb1, domain 4)|interpro:IPR038120|interpro:IPR040402|interpro:IPR040403|interpro:IPR042102|refseq:NP_001185298.1|refseq:NP_176490.2|dip:DIP-48679N refseq:NP_188871.1|dip:DIP-48677N|ensemblplants:AT3G22320(gene)|ensemblplants:AT3G22320.1(transcript)|go:"GO:0000418"(RNA polymerase IV complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0006351"(transcription, DNA-templated)|interpro:IPR000783(RNA polymerase, subunit H/Rpb5 C-terminal)|interpro:IPR005571(RNA polymerase, Rpb5, N-terminal)|interpro:IPR014381(DNA-directed RNA polymerase, RPB5 subunit)|interpro:IPR020608|interpro:IPR020609|interpro:IPR035913|interpro:IPR036710|interpro:IPR039531 psi-mi:"MI:0465"(dip) - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2017/08/06 2017/08/10 rogid:MR1N0Y7gXY8niITdHvprvIHW4Fw3702 rogid:rS85PQGMv2PdHZbFgmt1sJunKuI3702 rigid:7v149u6SFZIxMiZCBbXf4uRB/38 false flag tag:c-c - - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot)