#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:Q00416	uniprotkb:P32598	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-13715|ensemblfungi:YER133W|uniprotkb:D3DM39	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:pp12_yeast(display_long)|uniprotkb:GLC7(gene name)|psi-mi:GLC7(display_short)|uniprotkb:CID1(gene name synonym)|uniprotkb:DIS2(gene name synonym)|uniprotkb:YER133W(locus name)	psi-mi:"MI:0018"(two hybrid)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16420905|imex:IM-26211-1	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YER133W(gene)|ensemblfungi:YER133W_mRNA(transcript)|go:"GO:0000076"(DNA replication checkpoint signaling)|go:"GO:0000077"(DNA damage checkpoint signaling)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000776"(kinetochore)|go:"GO:0001400"(mating projection base)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005847"(mRNA cleavage and polyadenylation specificity factor complex)|go:"GO:0005935"(cellular bud neck)|go:"GO:0005977"(glycogen metabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006873"(cellular ion homeostasis)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0007059"(chromosome segregation)|go:"GO:0007094"(mitotic spindle assembly checkpoint signaling)|go:"GO:0007116"(regulation of cell budding)|go:"GO:0007346"(regulation of mitotic cell cycle)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0009408"(response to heat)|go:"GO:0005816"(spindle pole body)|go:"GO:0016576"(histone dephosphorylation)|go:"GO:0030437"(ascospore formation)|go:"GO:0031297"(replication fork processing)|go:"GO:0032153"(cell division site)|go:"GO:0034501"(protein localization to kinetochore)|go:"GO:0035307"(positive regulation of protein dephosphorylation)|go:"GO:0046872"(metal ion binding)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070873"(regulation of glycogen metabolic process)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:1901901"(regulation of protein localization to cell division site involved in cytokinesis)|go:"GO:1903501"(positive regulation of mitotic actomyosin contractile ring assembly)|go:"GO:2000370"(positive regulation of clathrin-dependent endocytosis)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|interpro:IPR031675|interpro:IPR037981|go:"GO:0070940"(dephosphorylation of RNA polymerase II C-terminal domain)|sgd:S000000935|refseq:NP_011059.3|mint:P32598|dip:DIP-1336N	-	crc64:88F0FF95B3A8BD89	crc64:71B20E3A4ED93235	figure legend:Fig. 4A, 4B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/09/28	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:wXXOB38if1fxEN0yLxeYTCXsuyU559292	rigid:EklYvwchxs8SsLn3hQiwN568uC4	false	mutation with no effect:1999-1999|mutation disrupting interaction strength:2003-2003|sufficient binding region:1890-2092	necessary binding region:133-312|mutation disrupting interaction strength:256-256|mutation decreasing interaction strength:292-292|mutation disrupting interaction strength:256-256,292-292	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q00416	uniprotkb:P32598	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-13715|ensemblfungi:YER133W|uniprotkb:D3DM39	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:pp12_yeast(display_long)|uniprotkb:GLC7(gene name)|psi-mi:GLC7(display_short)|uniprotkb:CID1(gene name synonym)|uniprotkb:DIS2(gene name synonym)|uniprotkb:YER133W(locus name)	psi-mi:"MI:0018"(two hybrid)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16420955|imex:IM-26211-3	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YER133W(gene)|ensemblfungi:YER133W_mRNA(transcript)|go:"GO:0000076"(DNA replication checkpoint signaling)|go:"GO:0000077"(DNA damage checkpoint signaling)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000776"(kinetochore)|go:"GO:0001400"(mating projection base)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005847"(mRNA cleavage and polyadenylation specificity factor complex)|go:"GO:0005935"(cellular bud neck)|go:"GO:0005977"(glycogen metabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006873"(cellular ion homeostasis)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0007059"(chromosome segregation)|go:"GO:0007094"(mitotic spindle assembly checkpoint signaling)|go:"GO:0007116"(regulation of cell budding)|go:"GO:0007346"(regulation of mitotic cell cycle)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0009408"(response to heat)|go:"GO:0005816"(spindle pole body)|go:"GO:0016576"(histone dephosphorylation)|go:"GO:0030437"(ascospore formation)|go:"GO:0031297"(replication fork processing)|go:"GO:0032153"(cell division site)|go:"GO:0034501"(protein localization to kinetochore)|go:"GO:0035307"(positive regulation of protein dephosphorylation)|go:"GO:0046872"(metal ion binding)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070873"(regulation of glycogen metabolic process)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:1901901"(regulation of protein localization to cell division site involved in cytokinesis)|go:"GO:1903501"(positive regulation of mitotic actomyosin contractile ring assembly)|go:"GO:2000370"(positive regulation of clathrin-dependent endocytosis)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|interpro:IPR031675|interpro:IPR037981|go:"GO:0070940"(dephosphorylation of RNA polymerase II C-terminal domain)|sgd:S000000935|refseq:NP_011059.3|mint:P32598|dip:DIP-1336N	-	crc64:88F0FF95B3A8BD89	crc64:71B20E3A4ED93235	figure legend:Fig. 4A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/09/29	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:wXXOB38if1fxEN0yLxeYTCXsuyU559292	rigid:EklYvwchxs8SsLn3hQiwN568uC4	false	mutation with no effect:1999-1999|mutation disrupting interaction strength:2003-2003|sufficient binding region:1890-2092	necessary binding region:233-312	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P42073	uniprotkb:P32598	intact:EBI-14915|uniprotkb:D6VSH8|ensemblfungi:YDR195W	intact:EBI-13715|ensemblfungi:YER133W|uniprotkb:D3DM39	psi-mi:ref2_yeast(display_long)|uniprotkb:YD9346.06(orf name)|uniprotkb:YDR195W(locus name)|uniprotkb:REF2(gene name)|psi-mi:REF2(display_short)	psi-mi:pp12_yeast(display_long)|uniprotkb:GLC7(gene name)|psi-mi:GLC7(display_short)|uniprotkb:CID1(gene name synonym)|uniprotkb:DIS2(gene name synonym)|uniprotkb:YER133W(locus name)	psi-mi:"MI:0018"(two hybrid)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16420965|imex:IM-26211-5	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000002603|refseq:NP_010481.3|ensemblfungi:YDR195W(gene)|ensemblfungi:YDR195W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005847"(mRNA cleavage and polyadenylation specificity factor complex)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0030846"("termination of RNA polymerase II transcription, poly(A)-coupled")|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:1900364"(negative regulation of mRNA polyadenylation)|go:"GO:1901901"(regulation of protein localization to cell division site involved in cytokinesis)|go:"GO:1903501"(positive regulation of mitotic actomyosin contractile ring assembly)|go:"GO:0003723"(RNA binding)|dip:DIP-871N|mint:P42073	ensemblfungi:YER133W(gene)|ensemblfungi:YER133W_mRNA(transcript)|go:"GO:0000076"(DNA replication checkpoint signaling)|go:"GO:0000077"(DNA damage checkpoint signaling)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000776"(kinetochore)|go:"GO:0001400"(mating projection base)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005847"(mRNA cleavage and polyadenylation specificity factor complex)|go:"GO:0005935"(cellular bud neck)|go:"GO:0005977"(glycogen metabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006873"(cellular ion homeostasis)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0007059"(chromosome segregation)|go:"GO:0007094"(mitotic spindle assembly checkpoint signaling)|go:"GO:0007116"(regulation of cell budding)|go:"GO:0007346"(regulation of mitotic cell cycle)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0009408"(response to heat)|go:"GO:0005816"(spindle pole body)|go:"GO:0016576"(histone dephosphorylation)|go:"GO:0030437"(ascospore formation)|go:"GO:0031297"(replication fork processing)|go:"GO:0032153"(cell division site)|go:"GO:0034501"(protein localization to kinetochore)|go:"GO:0035307"(positive regulation of protein dephosphorylation)|go:"GO:0046872"(metal ion binding)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070873"(regulation of glycogen metabolic process)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:1901901"(regulation of protein localization to cell division site involved in cytokinesis)|go:"GO:1903501"(positive regulation of mitotic actomyosin contractile ring assembly)|go:"GO:2000370"(positive regulation of clathrin-dependent endocytosis)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|interpro:IPR031675|interpro:IPR037981|go:"GO:0070940"(dephosphorylation of RNA polymerase II C-terminal domain)|sgd:S000000935|refseq:NP_011059.3|mint:P32598|dip:DIP-1336N	-	crc64:36B0982B005697C4	crc64:71B20E3A4ED93235	figure legend:Fig. 2C, 4B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/09/29	rogid:NNnPcRDJ8H2zNMTTpptsUDY+fto559292	rogid:wXXOB38if1fxEN0yLxeYTCXsuyU559292	rigid:RZNKS/NfZFptGpPbRZUPAcdiFG8	false	mutation disrupting interaction strength:374-374	mutation disrupting interaction strength:256-256|mutation decreasing interaction strength:292-292|mutation disrupting interaction strength:256-256,292-292	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P36104	uniprotkb:P32598	intact:EBI-26608|uniprotkb:D6VXR8|ensemblfungi:YKL018W	intact:EBI-13715|ensemblfungi:YER133W|uniprotkb:D3DM39	psi-mi:swd2_yeast(display_long)|uniprotkb:CPS35(gene name synonym)|uniprotkb:YKL018W(locus name)|uniprotkb:SWD2(gene name)|psi-mi:SWD2(display_short)|uniprotkb:SAF37(gene name synonym)|uniprotkb:Complex proteins associated with SET1 protein SWD2(gene name synonym)|uniprotkb:Set1C component SWD2(gene name synonym)	psi-mi:pp12_yeast(display_long)|uniprotkb:GLC7(gene name)|psi-mi:GLC7(display_short)|uniprotkb:CID1(gene name synonym)|uniprotkb:DIS2(gene name synonym)|uniprotkb:YER133W(locus name)	psi-mi:"MI:0018"(two hybrid)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16420976|imex:IM-26211-7	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000001501|refseq:NP_012907.3|mint:P36104|dip:DIP-6844N|ensemblfungi:YKL018W(gene)|ensemblfungi:YKL018W_mRNA(transcript)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003682"(chromatin binding)|go:"GO:0005847"(mRNA cleavage and polyadenylation specificity factor complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034729"(histone H3-K79 methylation)|go:"GO:0048188"(Set1C/COMPASS complex)|go:"GO:0051568"(histone H3-K4 methylation)|go:"GO:0080182"(histone H3-K4 trimethylation)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037867	ensemblfungi:YER133W(gene)|ensemblfungi:YER133W_mRNA(transcript)|go:"GO:0000076"(DNA replication checkpoint signaling)|go:"GO:0000077"(DNA damage checkpoint signaling)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000776"(kinetochore)|go:"GO:0001400"(mating projection base)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005847"(mRNA cleavage and polyadenylation specificity factor complex)|go:"GO:0005935"(cellular bud neck)|go:"GO:0005977"(glycogen metabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006873"(cellular ion homeostasis)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0007059"(chromosome segregation)|go:"GO:0007094"(mitotic spindle assembly checkpoint signaling)|go:"GO:0007116"(regulation of cell budding)|go:"GO:0007346"(regulation of mitotic cell cycle)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0009408"(response to heat)|go:"GO:0005816"(spindle pole body)|go:"GO:0016576"(histone dephosphorylation)|go:"GO:0030437"(ascospore formation)|go:"GO:0031297"(replication fork processing)|go:"GO:0032153"(cell division site)|go:"GO:0034501"(protein localization to kinetochore)|go:"GO:0035307"(positive regulation of protein dephosphorylation)|go:"GO:0046872"(metal ion binding)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070873"(regulation of glycogen metabolic process)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:1901901"(regulation of protein localization to cell division site involved in cytokinesis)|go:"GO:1903501"(positive regulation of mitotic actomyosin contractile ring assembly)|go:"GO:2000370"(positive regulation of clathrin-dependent endocytosis)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|interpro:IPR031675|interpro:IPR037981|go:"GO:0070940"(dephosphorylation of RNA polymerase II C-terminal domain)|sgd:S000000935|refseq:NP_011059.3|mint:P32598|dip:DIP-1336N	-	crc64:5453C193A5C0AEEC	crc64:71B20E3A4ED93235	figure legend:Fig. 4B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/09/29	rogid:XvCuGlH+mrlrlbO3LN/z+8E0cQI559292	rogid:wXXOB38if1fxEN0yLxeYTCXsuyU559292	rigid:FN29+7zkY5OGynqTs3AA4g5MgyY	false	-	mutation disrupting interaction strength:256-256|mutation decreasing interaction strength:292-292|mutation disrupting interaction strength:256-256,292-292	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P38996	uniprotkb:P38996	intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8	intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8	psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym)	psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym)	psi-mi:"MI:0018"(two hybrid)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421171|imex:IM-26211-15	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N	interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N	-	crc64:CD6D2C7F24A44993	crc64:CD6D2C7F24A44993	figure legend:Fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/09/29	rogid:iVBA824UReQJmvua7xganVlrm9U559292	rogid:iVBA824UReQJmvua7xganVlrm9U559292	rigid:1XFnFX7SGZUPFXqMD/7njfUz3uM	false	-	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q00416	uniprotkb:P38996	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym)	psi-mi:"MI:0018"(two hybrid)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421175|imex:IM-26211-17	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N	-	crc64:88F0FF95B3A8BD89	crc64:CD6D2C7F24A44993	figure legend:Fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/09/29	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:iVBA824UReQJmvua7xganVlrm9U559292	rigid:vfMND7THwAPn/iFi0CGkD+5+DDY	false	sufficient binding region:1890-2092|mutation with no effect:1999-1999|mutation with no effect:2003-2003	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q00416	uniprotkb:P38996	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym)	psi-mi:"MI:0018"(two hybrid)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421185|imex:IM-26211-19	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N	-	crc64:88F0FF95B3A8BD89	crc64:CD6D2C7F24A44993	figure legend:Fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/09/29	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:iVBA824UReQJmvua7xganVlrm9U559292	rigid:vfMND7THwAPn/iFi0CGkD+5+DDY	false	sufficient binding region:1890-2092|mutation with no effect:1999-1999|mutation with no effect:2003-2003	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q00416	uniprotkb:P32598	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-13715|ensemblfungi:YER133W|uniprotkb:D3DM39	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:pp12_yeast(display_long)|uniprotkb:GLC7(gene name)|psi-mi:GLC7(display_short)|uniprotkb:CID1(gene name synonym)|uniprotkb:DIS2(gene name synonym)|uniprotkb:YER133W(locus name)	psi-mi:"MI:0096"(pull down)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421010|imex:IM-26211-9	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YER133W(gene)|ensemblfungi:YER133W_mRNA(transcript)|go:"GO:0000076"(DNA replication checkpoint signaling)|go:"GO:0000077"(DNA damage checkpoint signaling)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000776"(kinetochore)|go:"GO:0001400"(mating projection base)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005847"(mRNA cleavage and polyadenylation specificity factor complex)|go:"GO:0005935"(cellular bud neck)|go:"GO:0005977"(glycogen metabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006873"(cellular ion homeostasis)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0007059"(chromosome segregation)|go:"GO:0007094"(mitotic spindle assembly checkpoint signaling)|go:"GO:0007116"(regulation of cell budding)|go:"GO:0007346"(regulation of mitotic cell cycle)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0009408"(response to heat)|go:"GO:0005816"(spindle pole body)|go:"GO:0016576"(histone dephosphorylation)|go:"GO:0030437"(ascospore formation)|go:"GO:0031297"(replication fork processing)|go:"GO:0032153"(cell division site)|go:"GO:0034501"(protein localization to kinetochore)|go:"GO:0035307"(positive regulation of protein dephosphorylation)|go:"GO:0046872"(metal ion binding)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070873"(regulation of glycogen metabolic process)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:1901901"(regulation of protein localization to cell division site involved in cytokinesis)|go:"GO:1903501"(positive regulation of mitotic actomyosin contractile ring assembly)|go:"GO:2000370"(positive regulation of clathrin-dependent endocytosis)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|interpro:IPR031675|interpro:IPR037981|go:"GO:0070940"(dephosphorylation of RNA polymerase II C-terminal domain)|sgd:S000000935|refseq:NP_011059.3|mint:P32598|dip:DIP-1336N	-	crc64:88F0FF95B3A8BD89	crc64:71B20E3A4ED93235	figure legend:Fig. 4C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:wXXOB38if1fxEN0yLxeYTCXsuyU559292	rigid:EklYvwchxs8SsLn3hQiwN568uC4	false	glutathione s tranferase tag:?-?|sufficient binding region:1890-2092	his tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q00416	uniprotkb:Q06205	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-6956|uniprotkb:D6VZ83|ensemblfungi:YLR449W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:fkbp4_yeast(display_long)|uniprotkb:FPR4(gene name)|psi-mi:FPR4(display_short)|uniprotkb:YLR449W(locus name)|uniprotkb:L9324.3(orf name)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Rotamase(gene name synonym)|uniprotkb:Histone proline isomerase(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	sgd:S000004441|refseq:NP_013554.3|dip:DIP-909N|mint:Q06205|ensemblfungi:YLR449W(gene)|ensemblfungi:YLR449W_mRNA(transcript)|go:"GO:0000412"(histone peptidyl-prolyl isomerization)|go:"GO:0000415"(negative regulation of histone H3-K36 methylation)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|rcsb pdb:4BF8	-	crc64:88F0FF95B3A8BD89	crc64:CF90C6714F04572E	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:rDmDSGEgRbtgkLBoJTzmzxxY7B4559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P22138	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-15736|uniprotkb:D6W421|ensemblfungi:YPR010C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:rpa2_yeast(display_long)|uniprotkb:RPA135(gene name)|psi-mi:RPA135(display_short)|uniprotkb:RPA2(gene name synonym)|uniprotkb:RRN2(gene name synonym)|uniprotkb:SRP3(gene name synonym)|uniprotkb:YPR010C(locus name)|uniprotkb:YP9531.03C(orf name)|uniprotkb:DNA-directed RNA polymerase I polypeptide 2(gene name synonym)|uniprotkb:DNA-directed RNA polymerase I 135 kDa polypeptide(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_015335.1|sgd:S000006214|rcsb pdb:5M5Y|rcsb pdb:5M64|rcsb pdb:5N5Y|rcsb pdb:5N5Z|rcsb pdb:5N60|rcsb pdb:5N61|rcsb pdb:5OA1|rcsb pdb:5W5Y|rcsb pdb:5W64|rcsb pdb:5M5X|rcsb pdb:5W65|rcsb pdb:5W66|rcsb pdb:6H67|rcsb pdb:6H68|rcsb pdb:6HKO|rcsb pdb:6HLQ|rcsb pdb:6HLR|rcsb pdb:6HLS|rcsb pdb:6RQH|rcsb pdb:6RQL|rcsb pdb:6RQT|rcsb pdb:6RRD|rcsb pdb:6RUI|rcsb pdb:6RUO|rcsb pdb:6RWE|rcsb pdb:6TPS|reactome:R-SCE-73762|reactome:R-SCE-73772|ensemblfungi:YPR010C(gene)|ensemblfungi:YPR010C_mRNA(transcript)|go:"GO:0001054"(RNA polymerase I activity)|go:"GO:0003677"(DNA binding)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042790"(nucleolar large rRNA transcription by RNA polymerase I)|go:"GO:0046872"(metal ion binding)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR009674(RNA polymerase I, Rpa2 specific)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR037033|interpro:IPR037034|rcsb pdb:4C2M|rcsb pdb:4C3H|rcsb pdb:4C3I|rcsb pdb:4C3J|rcsb pdb:4YM7|rcsb pdb:5G5L|rcsb pdb:5LMX|rcsb pdb:5M3F|rcsb pdb:5M3M|rcsb pdb:5M5W|dip:DIP-135N|mint:P22138	-	crc64:88F0FF95B3A8BD89	crc64:72FA95B66F98C5F8	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:9uVcBIikY0xLsnYo9ZZaqfLX2u8559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q12754	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)	-	crc64:88F0FF95B3A8BD89	crc64:92333BCD53CB095F	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:RP53JIWBThgT+cJh8AQgdOresC8559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q12532	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-33283|uniprotkb:D6W403|ensemblfungi:YPL009C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:rqc2_yeast(display_long)|uniprotkb:RQC2(gene name)|psi-mi:RQC2(display_short)|uniprotkb:TAE2(gene name synonym)|uniprotkb:Translation-associated element 2(gene name synonym)|uniprotkb:YP8132.04C(orf name)|uniprotkb:YPL009C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_015316.1|sgd:S000005930|mint:Q12532|dip:DIP-6570N|ensemblfungi:YPL009C(gene)|ensemblfungi:YPL009C_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0043023"(ribosomal large subunit binding)|go:"GO:0043043"(peptide biosynthetic process)|go:"GO:0072344"(rescue of stalled ribosome)|go:"GO:1990112"(RQC complex)|go:"GO:1990116"(ribosome-associated ubiquitin-dependent protein catabolic process)|interpro:IPR008532(Protein of unknown function DUF814)|interpro:IPR021846	-	crc64:88F0FF95B3A8BD89	crc64:C0ADE76922F26BE0	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:HeNNocT30IWWpF8oqP6Y0m2JyY0559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P36120	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-5629|uniprotkb:D6VX89|ensemblfungi:YKR024C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:dbp7_yeast(display_long)|uniprotkb:YKR024C(locus name)|uniprotkb:DBP7(gene name)|psi-mi:DBP7(display_short)|uniprotkb:DEAD box protein 7(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_012949.1|sgd:S000001732|dip:DIP-1833N|mint:P36120|ensemblfungi:YKR024C(gene)|ensemblfungi:YKR024C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417	-	crc64:88F0FF95B3A8BD89	crc64:A7E25BC16AE09A0B	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:WUW9Kewy2qZDmm61bzPIHxXo0dA559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P11632	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-12019|ensemblfungi:YPR052C|uniprotkb:D6W459	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nhp6a_yeast(display_long)|uniprotkb:NHP6A(gene name)|psi-mi:NHP6A(display_short)|uniprotkb:NHPA(gene name synonym)|uniprotkb:YPR052C(locus name)|uniprotkb:YP9499.09C(orf name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YPR052C(gene)|ensemblfungi:YPR052C_mRNA(transcript)|go:"GO:0001195"(maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase III promoter)|go:"GO:0005634"(nucleus)|go:"GO:0005694"(chromosome)|go:"GO:0006298"(mismatch repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0008301"(DNA binding, bending)|go:"GO:0031491"(nucleosome binding)|go:"GO:0032407"(MutSalpha complex binding)|go:"GO:0032993"(protein-DNA complex)|go:"GO:0043392"(negative regulation of DNA binding)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0065004"(protein-DNA complex assembly)|go:"GO:0070898"(RNA polymerase III preinitiation complex assembly)|rcsb pdb:1CG7|rcsb pdb:1J5N|rcsb pdb:1LWM|reactome:R-SCE-140342|reactome:R-SCE-5620971|reactome:R-SCE-5686938|reactome:R-SCE-6798695|go:"GO:0034724"(DNA replication-independent chromatin organization)|refseq:NP_015377.1|sgd:S000006256|interpro:IPR009071(High mobility group box, HMG)|mint:P11632|interpro:IPR036910	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:fbls09qQTu0Jt8gk8qhtEvOFYAI559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P53883	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-29032|uniprotkb:D6W110|ensemblfungi:YNL175C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nop13_yeast(display_long)|uniprotkb:NOP13(gene name)|psi-mi:NOP13(display_short)|uniprotkb:N1665(orf name)|uniprotkb:YNL175C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014224.2|sgd:S000005119|dip:DIP-4331N|mint:P53883|ensemblfungi:YNL175C(gene)|ensemblfungi:YNL175C_mRNA(transcript)|go:"GO:0001731"(formation of translation preinitiation complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030684"(preribosome)|go:"GO:0033592"(RNA strand annealing activity)|go:"GO:0034057"(RNA strand-exchange activity)|go:"GO:0043024"(ribosomal small subunit binding)|go:"GO:0097010"(eukaryotic translation initiation factor 4F complex assembly)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034225|interpro:IPR034226|interpro:IPR035979|reactome:R-SCE-156827|reactome:R-SCE-166208|reactome:R-SCE-429947|reactome:R-SCE-72649|reactome:R-SCE-72662|reactome:R-SCE-72702	-	crc64:88F0FF95B3A8BD89	crc64:FB1A0FB46B13C201	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:13Kj/Exmk8m6xKw1rbat8NkPius559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P38712	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-16007|uniprotkb:Q6TQT5|uniprotkb:Q6TQT6|ensemblfungi:YHR065C|uniprotkb:D3DL14	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:rrp3_yeast(display_long)|uniprotkb:RRP3(gene name)|psi-mi:RRP3(display_short)|uniprotkb:Ribosomal RNA-processing protein 3(gene name synonym)|uniprotkb:YHR065C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_011932.2|sgd:S000001107|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR044765|reactome:R-SCE-6791226|ensemblfungi:YHR065C(gene)|ensemblfungi:YHR065C_mRNA(transcript)|dip:DIP-6533N|mint:P38712	-	crc64:88F0FF95B3A8BD89	crc64:AA17798E0897272F	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:EDMS6kbydKXX1fn1HN5qH26h7oE559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:O14467	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-2043025|uniprotkb:D6W2Z8|uniprotkb:Q7LGJ8|uniprotkb:Q86ZS7|ensemblfungi:YOR298C-A	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:mbf1_yeast(display_long)|uniprotkb:MBF1(gene name)|psi-mi:MBF1(display_short)|uniprotkb:SUF13(gene name synonym)|uniprotkb:Suppressor of frameshift mutations protein 13(gene name synonym)|uniprotkb:YOR298C-A(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	sgd:S000007253|refseq:NP_014942.4|dip:DIP-8708N|ensemblfungi:YOR298C-A(gene)|ensemblfungi:YOR298C-A_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR001387(Helix-turn-helix type 3)|interpro:IPR010982(Lambda repressor-like, DNA-binding)|interpro:IPR013729(Multiprotein bridging factor 1, N-terminal)|rcsb pdb:6ZVI|rcsb pdb:7NRD	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:+4/YQ5EYKlmOd6zaBc3US/AycYw559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q04373	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-33208|uniprotkb:D6VTB8|ensemblfungi:YDR496C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:puf6_yeast(display_long)|uniprotkb:PUF6(gene name)|psi-mi:PUF6(display_short)|uniprotkb:D9719.2(orf name)|uniprotkb:YDR496C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_010784.1|sgd:S000002904|mint:Q04373|dip:DIP-6579N|ensemblfungi:YDR496C(gene)|ensemblfungi:YDR496C_mRNA(transcript)|go:"GO:0000900"(translation repressor activity, mRNA regulatory element binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005934"(cellular bud tip)|go:"GO:0006417"(regulation of translation)|go:"GO:0015934"(large ribosomal subunit)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0048027"(mRNA 5'-UTR binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0101031"(chaperone complex)|interpro:IPR001313(Pumilio RNA-binding region)|interpro:IPR012959(CPL)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR033133|interpro:IPR040059	-	crc64:88F0FF95B3A8BD89	crc64:4D172E8854326ECF	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:qvUqCO0jnVteddl3kPBZZC6xCZ8559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q01080	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-15741|uniprotkb:D6W0U5|ensemblfungi:YNL248C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:rpa49_yeast(display_long)|uniprotkb:RPA49(gene name)|psi-mi:RPA49(display_short)|uniprotkb:RRN13(gene name synonym)|uniprotkb:YNL248C(locus name)|uniprotkb:N0880(orf name)|uniprotkb:DNA-directed RNA polymerase I 49 kDa polypeptide(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014151.1|sgd:S000005192|rcsb pdb:6RQL|rcsb pdb:6RQT|rcsb pdb:6RRD|rcsb pdb:6RUI|rcsb pdb:6RUO|rcsb pdb:6RWE|rcsb pdb:6TPS|reactome:R-SCE-73762|reactome:R-SCE-73772|go:"GO:0003677"(DNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0008361"(regulation of cell size)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042790"(nucleolar large rRNA transcription by RNA polymerase I)|interpro:IPR009668(RNA polymerase I associated factor, A49-like)|rcsb pdb:3NFH|rcsb pdb:3NFI|rcsb pdb:4C2M|rcsb pdb:4C3H|rcsb pdb:4C3I|rcsb pdb:4C3J|rcsb pdb:4YM7|rcsb pdb:5G5L|rcsb pdb:5LMX|rcsb pdb:5M3F|ensemblfungi:YNL248C(gene)|rcsb pdb:5M3M|rcsb pdb:5M5W|rcsb pdb:5M5X|rcsb pdb:5M5Y|rcsb pdb:5M64|rcsb pdb:5N5Y|rcsb pdb:5N5Z|rcsb pdb:5N60|rcsb pdb:5N61|rcsb pdb:5OA1|rcsb pdb:5W5Y|ensemblfungi:YNL248C_mRNA(transcript)|rcsb pdb:5W64|rcsb pdb:5W65|rcsb pdb:5W66|go:"GO:0001054"(RNA polymerase I activity)|rcsb pdb:6H67|rcsb pdb:6H68|go:"GO:0001188"(RNA polymerase I preinitiation complex assembly)|rcsb pdb:6HKO|rcsb pdb:6RQH|dip:DIP-6577N|mint:Q01080	-	crc64:88F0FF95B3A8BD89	crc64:3D9BF05440D26021	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:B7Nabi651A5fAilRf/0F2GHps/U559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q07897	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-37851|uniprotkb:D6VY05|ensemblfungi:YLR003C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:cms1_yeast(display_long)|uniprotkb:Complementation of MCM10 suppressor protein 1(gene name synonym)|uniprotkb:CMS1(gene name)|psi-mi:CMS1(display_short)|uniprotkb:YLR003C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	sgd:S000003993|refseq:NP_013103.1|dip:DIP-2550N|ensemblfungi:YLR003C(gene)|ensemblfungi:YLR003C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0030686"(90S preribosome)|interpro:IPR032704	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:T/2phZIieB1ObKM7wCuxN7+yXYo559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P53741	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-28528|uniprotkb:D6W1M6|ensemblfungi:YNR051C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:bre5_yeast(display_long)|uniprotkb:BRE5(gene name)|psi-mi:BRE5(display_short)|uniprotkb:YNR051C(locus name)|uniprotkb:N3465(orf name)|uniprotkb:Brefeldin-A sensitivity protein 5(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014449.1|sgd:S000005334|dip:DIP-4254N|mint:P53741|ensemblfungi:YNR051C(gene)|ensemblfungi:YNR051C_mRNA(transcript)|go:"GO:0000932"(P-body)|go:"GO:0003729"(mRNA binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0034517"(ribophagy)|go:"GO:0042802"(identical protein binding)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0060628"(regulation of ER to Golgi vesicle-mediated transport)|go:"GO:1990861"(Ubp3-Bre5 deubiquitination complex)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002075(Nuclear transport factor 2)|interpro:IPR018222|interpro:IPR032710|interpro:IPR039539|rcsb pdb:1ZX2|rcsb pdb:2QIY	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:DIP3qqPEixSKoo2gi7O9Zsrj7wk559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P20448	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-5612|uniprotkb:Q6B1G2|uniprotkb:Q92329|uniprotkb:D6VWF0|ensemblfungi:YJL033W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:dbp4_yeast(display_long)|uniprotkb:HCA4(gene name)|psi-mi:HCA4(display_short)|uniprotkb:DBP4(gene name synonym)|uniprotkb:YJL033W(locus name)|uniprotkb:J1250(orf name)|uniprotkb:DEAD box protein 4(gene name synonym)|uniprotkb:Helicase CA4(gene name synonym)|uniprotkb:Helicase UF1(gene name synonym)|uniprotkb:ECM24(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_012501.1|sgd:S000003570|dip:DIP-6819N|mint:P20448|ensemblfungi:YJL033W(gene)|ensemblfungi:YJL033W_mRNA(transcript)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:hZC8PbpRO4cejcdtBNhcz4cBHkY559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P30619	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-16833|ensemblfungi:YDR164C|uniprotkb:D6VSE4	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:sec1_yeast(display_long)|uniprotkb:YD8358.18C(orf name)|uniprotkb:YDR164C(locus name)|uniprotkb:SEC1(gene name)|psi-mi:SEC1(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_010448.1|sgd:S000002571|ensemblfungi:YDR164C(gene)|ensemblfungi:YDR164C_mRNA(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019905"(syntaxin binding)|go:"GO:0031340"(positive regulation of vesicle fusion)|go:"GO:0071944"(cell periphery)|interpro:IPR001619(Sec1-like protein)|interpro:IPR027482|interpro:IPR036045|interpro:IPR043127|interpro:IPR043154|reactome:R-SCE-114516|reactome:R-SCE-114608|dip:DIP-2498N|mint:P30619	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:RzbrtUyiWvekBzyY1BbqMg3AyTM559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q06217	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-235|uniprotkb:D6VYS2|ensemblfungi:YLR275W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:smd2_yeast(display_long)|uniprotkb:SMD2(gene name)|psi-mi:SMD2(display_short)|uniprotkb:YLR275W(locus name)|uniprotkb:L9328.5(orf name)|uniprotkb:snRNP core protein D2(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	sgd:S000004265|refseq:NP_013377.1|mint:Q06217|dip:DIP-1421N|ensemblfungi:YLR275W(gene)|ensemblfungi:YLR275W_mRNA(transcript)|go:"GO:0000387"(spliceosomal snRNP assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005685"(U1 snRNP)|go:"GO:0005686"(U2 snRNP)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0071004"(U2-type prespliceosome)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR027248|rcsb pdb:3JCM|rcsb pdb:5GAM|rcsb pdb:5GAN|rcsb pdb:5GAO|rcsb pdb:5GM6|rcsb pdb:5GMK|rcsb pdb:5LJ3|rcsb pdb:5LJ5|rcsb pdb:5LQW|rcsb pdb:5MPS|rcsb pdb:5MQ0|rcsb pdb:5NRL|rcsb pdb:5WSG|rcsb pdb:5Y88|rcsb pdb:5YLZ|rcsb pdb:5ZWM|rcsb pdb:5ZWN|rcsb pdb:5ZWO|rcsb pdb:6BK8|rcsb pdb:6EXN|rcsb pdb:6G90|rcsb pdb:6J6G|rcsb pdb:6J6H|rcsb pdb:6J6N|rcsb pdb:6J6Q|rcsb pdb:6N7P|rcsb pdb:6N7R|rcsb pdb:6N7X|rcsb pdb:7B9V	-	crc64:88F0FF95B3A8BD89	crc64:7287070B10E090C0	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:rglZ3AQuJfa1rFYIeZLqiYj+L4U559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P39990	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-12032|ensemblfungi:YEL026W|uniprotkb:D3DLM2	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:snu13_yeast(display_long)|uniprotkb:YEL026W(locus name)|uniprotkb:SNU13(gene name)|psi-mi:SNU13(display_short)|uniprotkb:Small nuclear ribonucleoprotein-associated protein 1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YEL026W(gene)|ensemblfungi:YEL026W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030621"(U4 snRNA binding)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:1905216"(positive regulation of RNA binding)|interpro:IPR002415(High mobility group-like nuclear protein)|interpro:IPR004037(Ribosomal protein L7Ae)|interpro:IPR004038(Ribosomal protein L7Ae/L30e/S12e/Gadd45)|interpro:IPR018492|interpro:IPR029064|rcsb pdb:1ZWZ|rcsb pdb:2ALE|rcsb pdb:3JCM|go:"GO:0005654"(nucleoplasm)|rcsb pdb:5GAN|rcsb pdb:5GAP|rcsb pdb:5NRL|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|rcsb pdb:4NUT|reactome:R-SCE-6791226|refseq:NP_010888.1|sgd:S000000752|mint:P39990|dip:DIP-2870N	-	crc64:88F0FF95B3A8BD89	crc64:4489780153E8F182	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:4C07wkvZ4Nts4Oxw4/L7QMkwcmE559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P12945	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-11868|ensemblfungi:YDL040C|uniprotkb:D6VRV5	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nat1_yeast(display_long)|uniprotkb:NAT1(gene name)|psi-mi:NAT1(display_short)|uniprotkb:AAA1(gene name synonym)|uniprotkb:YDL040C(locus name)|uniprotkb:D2720(orf name)|uniprotkb:Amino-terminal, alpha-amino, acetyltransferase 1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YDL040C(gene)|ensemblfungi:YDL040C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006474"(N-terminal protein amino acid acetylation)|go:"GO:0017196"(N-terminal peptidyl-methionine acetylation)|go:"GO:0031415"(NatA complex)|go:"GO:0043022"(ribosome binding)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR021183|rcsb pdb:4HNW|rcsb pdb:4HNY|rcsb pdb:4XNH|rcsb pdb:4XPD|rcsb pdb:4Y49|rcsb pdb:6HD5|rcsb pdb:6HD7|rcsb pdb:6O07|refseq:NP_010244.1|sgd:S000002198|dip:DIP-6329N|mint:P12945	-	crc64:88F0FF95B3A8BD89	crc64:DCFB870D049F91E6	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:uzbL/wNoQ9nAcZzglVrbI4GKzOg559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P33201	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-26590|uniprotkb:D6VXS7|ensemblfungi:YKL009W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:mrt4_yeast(display_long)|uniprotkb:MRT4(gene name)|psi-mi:MRT4(display_short)|uniprotkb:mRNA turnover protein 4(gene name synonym)|uniprotkb:YKL160(orf name)|uniprotkb:YKL009W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_012916.1|sgd:S000001492|mint:P33201|dip:DIP-5283N|ensemblfungi:YKL009W(gene)|ensemblfungi:YKL009W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|interpro:IPR001790(Ribosomal protein L10)|interpro:IPR033867|interpro:IPR040637|interpro:IPR043141|interpro:IPR043164|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB	-	crc64:88F0FF95B3A8BD89	crc64:9FCFDEE9F009F427	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:IhMrxT728QbN9W/Nkc6CpzmCP5o559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P38934	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-3593|uniprotkb:D6W2Q7|ensemblfungi:YOR198C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:bfr1_yeast(display_long)|uniprotkb:Brefeldin A resistance protein 1(gene name synonym)|uniprotkb:YOR198C(locus name)|uniprotkb:BFR1(gene name)|psi-mi:BFR1(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014841.1|sgd:S000005724|dip:DIP-4128N|mint:P38934|ensemblfungi:YOR198C(gene)|ensemblfungi:YOR198C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005844"(polysome)|go:"GO:0007088"(regulation of mitotic nuclear division)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0035269"(protein O-linked mannosylation)|go:"GO:0042175"(nuclear outer membrane-endoplasmic reticulum membrane network)|go:"GO:0045048"(protein insertion into ER membrane)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR039604	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:JEqxluk8wRgU8RlJev2t1V1ygS0559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P37838	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838	-	crc64:88F0FF95B3A8BD89	crc64:61261815EA3DEE5C	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q99257	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-11642|ensemblfungi:YPL169C|uniprotkb:D6W3J9	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:mex67_yeast(display_long)|uniprotkb:MEX67(gene name)|psi-mi:MEX67(display_short)|uniprotkb:P2520(orf name)|uniprotkb:YPL169C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YPL169C(gene)|ensemblfungi:YPL169C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005643"(nuclear pore)|go:"GO:0005737"(cytoplasm)|go:"GO:0006406"(mRNA export from nucleus)|interpro:IPR032710|interpro:IPR040736|go:"GO:0015288"(porin activity)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0030619"(U1 snRNA binding)|rcsb pdb:1OF5|rcsb pdb:2JP7|rcsb pdb:2KHH|go:"GO:0030620"(U2 snRNA binding)|rcsb pdb:4WWU|go:"GO:0030621"(U4 snRNA binding)|go:"GO:0030623"(U5 snRNA binding)|go:"GO:0042272"(nuclear RNA export factor complex)|go:"GO:0051168"(nuclear export)|rcsb pdb:6EXZ|go:"GO:0055085"(transmembrane transport)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR005637(TAP, C-terminal)|interpro:IPR009060(UBA-like)|interpro:IPR018222|interpro:IPR030217|interpro:IPR032675|refseq:NP_015156.1|sgd:S000006090|mint:Q99257|dip:DIP-3984N	-	crc64:88F0FF95B3A8BD89	crc64:6CE55EEC6FA40B40	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:nIu6N+mnZtRkH8psmpu1AyfB5uo559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P04050	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-15760|uniprotkb:Q12364|uniprotkb:Q92315|uniprotkb:D6VRK8|intact:EBI-3652496|ensemblfungi:YDL140C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:rpb1_yeast(display_long)|uniprotkb:RPO21(gene name)|psi-mi:RPO21(display_short)|uniprotkb:RPB220(gene name synonym)|uniprotkb:RPB1(gene name synonym)|uniprotkb:SUA8(gene name synonym)|uniprotkb:YDL140C(locus name)|uniprotkb:D2150(orf name)|uniprotkb:DNA-directed RNA polymerase III largest subunit(gene name synonym)|uniprotkb:RNA polymerase II subunit B220(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_010141.1|sgd:S000002299|rcsb pdb:6GYL|rcsb pdb:6GYM|rcsb pdb:6I84|rcsb pdb:6NPW|rcsb pdb:6O6C|rcsb pdb:6UPX|rcsb pdb:6UPY|rcsb pdb:6UPZ|rcsb pdb:6UQ0|rcsb pdb:6UQ1|rcsb pdb:6UQ2|rcsb pdb:6UQ3|rcsb pdb:7KED|rcsb pdb:7KEE|rcsb pdb:7KEF|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-674695|go:"GO:0005634"(nucleus)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0019985"(translesion synthesis)|go:"GO:0046872"(metal ion binding)|interpro:IPR000684(RNA polymerase II, heptapeptide repeat, eukaryotic)|interpro:IPR000722(RNA polymerase, alpha subunit)|interpro:IPR006592(RNA polymerase, N-terminal)|interpro:IPR007066(RNA polymerase Rpb1, domain 3)|interpro:IPR007073(RNA polymerase Rpb1, domain 7)|interpro:IPR007075(RNA polymerase Rpb1, domain 6)|interpro:IPR007080(RNA polymerase Rpb1, domain 1)|interpro:IPR007081(RNA polymerase Rpb1, domain 5)|interpro:IPR007083(RNA polymerase Rpb1, domain 4)|interpro:IPR038120|interpro:IPR038593|interpro:IPR042102|rcsb pdb:1I3Q|rcsb pdb:1I50|rcsb pdb:1I6H|rcsb pdb:1K83|rcsb pdb:1NIK|rcsb pdb:1NT9|rcsb pdb:1PQV|rcsb pdb:1R5U|rcsb pdb:1R9S|rcsb pdb:1R9T|rcsb pdb:1SFO|rcsb pdb:1TWA|rcsb pdb:1TWC|rcsb pdb:1TWF|rcsb pdb:1TWG|rcsb pdb:1TWH|rcsb pdb:1WCM|rcsb pdb:1Y1V|rcsb pdb:1Y1W|rcsb pdb:1Y1Y|rcsb pdb:1Y77|rcsb pdb:2B63|rcsb pdb:2B8K|rcsb pdb:2E2H|rcsb pdb:2E2I|rcsb pdb:2E2J|rcsb pdb:2JA5|rcsb pdb:2JA6|rcsb pdb:2JA7|rcsb pdb:2JA8|rcsb pdb:2L0I|rcsb pdb:2LO6|rcsb pdb:2NVQ|rcsb pdb:2NVT|rcsb pdb:2NVX|rcsb pdb:2NVY|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|rcsb pdb:2NVZ|rcsb pdb:2R7Z|rcsb pdb:2R92|rcsb pdb:2R93|rcsb pdb:2VUM|rcsb pdb:2YU9|rcsb pdb:3CQZ|rcsb pdb:3FKI|rcsb pdb:3GTG|rcsb pdb:3GTJ|rcsb pdb:3GTK|rcsb pdb:3GTL|rcsb pdb:3GTM|rcsb pdb:3GTO|rcsb pdb:3GTP|rcsb pdb:3GTQ|rcsb pdb:3H3V|rcsb pdb:3HOU|rcsb pdb:3HOV|rcsb pdb:3HOW|rcsb pdb:3HOX|rcsb pdb:3HOY|rcsb pdb:3HOZ|rcsb pdb:3I4M|rcsb pdb:3I4N|ensemblfungi:YDL140C(gene)|ensemblfungi:YDL140C_mRNA(transcript)|go:"GO:0001172"(transcription, RNA-templated)|go:"GO:0003677"(DNA binding)|rcsb pdb:3J0K|rcsb pdb:3J1N|rcsb pdb:3K1F|rcsb pdb:3K7A|rcsb pdb:3M3Y|rcsb pdb:3M4O|rcsb pdb:3PO2|rcsb pdb:3PO3|rcsb pdb:3QT1|rcsb pdb:3RZD|rcsb pdb:3RZO|rcsb pdb:3S14|rcsb pdb:3S15|rcsb pdb:3S16|rcsb pdb:3S17|rcsb pdb:4BXX|rcsb pdb:4BXZ|rcsb pdb:3S1M|rcsb pdb:3S1N|rcsb pdb:3S1Q|rcsb pdb:3S1R|rcsb pdb:3S2D|rcsb pdb:3S2H|rcsb pdb:4A3B|rcsb pdb:4A3C|rcsb pdb:4A3D|rcsb pdb:4A3E|rcsb pdb:4A3F|rcsb pdb:4A3G|rcsb pdb:4A3I|rcsb pdb:4A3J|rcsb pdb:4A3K|rcsb pdb:4A3L|rcsb pdb:4A3M|rcsb pdb:4A93|rcsb pdb:4BBR|rcsb pdb:4BBS|rcsb pdb:4BY1|rcsb pdb:4BY7|rcsb pdb:4GWQ|rcsb pdb:4V1M|rcsb pdb:4V1N|rcsb pdb:4V1O|rcsb pdb:4X67|rcsb pdb:4X6A|rcsb pdb:4Y52|rcsb pdb:4Y7N|rcsb pdb:5C3E|rcsb pdb:5C44|rcsb pdb:5C4A|rcsb pdb:5C4J|rcsb pdb:5C4X|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5IP7|rcsb pdb:5IP9|rcsb pdb:5LVF|rcsb pdb:5M9D|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5OT2|rcsb pdb:5SVA|rcsb pdb:5U5Q|rcsb pdb:5VKL|rcsb pdb:5VKO|rcsb pdb:5VVR|rcsb pdb:5VVS|rcsb pdb:5W4U|rcsb pdb:5W51|rcsb pdb:6BLO|rcsb pdb:6BLP|rcsb pdb:6BM2|rcsb pdb:6BM4|rcsb pdb:6BQF|rcsb pdb:6GYK|dip:DIP-611N|mint:P04050|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-6807505|reactome:R-SCE-72086|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|reactome:R-SCE-9018519	-	crc64:88F0FF95B3A8BD89	crc64:A45C1360FF99F968	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:uDrfU2DMv4cFvCc7WKl65Aq8qOg559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P53145	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-23885|uniprotkb:D6VU46|ensemblfungi:YGL099W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:lsg1_yeast(display_long)|uniprotkb:LSG1(gene name)|psi-mi:LSG1(display_short)|uniprotkb:YGL099W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	sgd:S000003067|refseq:NP_011416.3|dip:DIP-6659N|mint:P53145|ensemblfungi:YGL099W(gene)|ensemblfungi:YGL099W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0003729"(mRNA binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0043332"(mating projection tip)|interpro:IPR006073(GTP1/OBG)|interpro:IPR027417|interpro:IPR030378|interpro:IPR043358|rcsb pdb:5T62|rcsb pdb:6N8N|rcsb pdb:6N8O|rcsb pdb:6QIK|rcsb pdb:6QTZ|rcsb pdb:6RI5|rcsb pdb:6RZZ|rcsb pdb:6S05	-	crc64:88F0FF95B3A8BD89	crc64:15FD76541A2E8410	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:9mANWO3rTsE/zCUr9GL6WxIexMU559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P43586	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")	-	crc64:88F0FF95B3A8BD89	crc64:69970294E9C980F9	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P27692	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-17937|uniprotkb:D6VZG4|ensemblfungi:YML010W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:spt5_yeast(display_long)|uniprotkb:SPT5(gene name)|psi-mi:SPT5(display_short)|uniprotkb:YML010W(locus name)|uniprotkb:YM9571.08(orf name)|uniprotkb:Chromatin elongation factor SPT5(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_013703.1|sgd:S000004470|ensemblfungi:YML010W(gene)|ensemblfungi:YML010W_mRNA(transcript)|go:"GO:0000245"(spliceosomal complex assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001042"(RNA polymerase I core binding)|go:"GO:0001179"(RNA polymerase I general transcription initiation factor binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030619"(U1 snRNA binding)|go:"GO:0030620"(U2 snRNA binding)|go:"GO:0030621"(U4 snRNA binding)|go:"GO:0030623"(U5 snRNA binding)|go:"GO:0032044"(DSIF complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0070990"(snRNP binding)|go:"GO:2000232"(regulation of rRNA processing)|go:"GO:2001208"(negative regulation of transcription elongation by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR005100(Supt5 repeat)|interpro:IPR005824(KOW)|interpro:IPR006645(Transcription antitermination protein, NusG, N-terminal)|interpro:IPR008991(Translation protein SH3-like)|interpro:IPR014722(Translation protein SH3-like, subgroup)|interpro:IPR017071(Transcription elongation factor Spt5)|interpro:IPR022581|interpro:IPR024945|interpro:IPR036735|interpro:IPR039385|interpro:IPR039659|interpro:IPR041973|interpro:IPR041975|interpro:IPR041976|interpro:IPR041977|interpro:IPR041978|rcsb pdb:2EXU|rcsb pdb:4YTK|rcsb pdb:4YTL|reactome:R-SCE-113418|reactome:R-SCE-674695|reactome:R-SCE-6796648|reactome:R-SCE-72086|reactome:R-SCE-75955|reactome:R-SCE-77075|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|dip:DIP-6621N|mint:P27692	-	crc64:88F0FF95B3A8BD89	crc64:E4324DB6B1E4721A	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:5atgyJBgDNSv1Jlg+SpCuA45MjU559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P26570	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-13807|uniprotkb:Q00979|ensemblfungi:YML016C|uniprotkb:D6VZF8	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:ppz1_yeast(display_long)|uniprotkb:PPZ1(gene name)|psi-mi:PPZ1(display_short)|uniprotkb:YM9571.02C(orf name)|uniprotkb:YML016C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YML016C(gene)|ensemblfungi:YML016C_mRNA(transcript)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006883"(cellular sodium ion homeostasis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0034613"(cellular protein localization)|go:"GO:0046872"(metal ion binding)|go:"GO:0106306"|go:"GO:0106307"|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR011159(Phosphoprotein phosphatase PPZ)|interpro:IPR029052|interpro:IPR031675|refseq:NP_013696.1|sgd:S000004478|mint:P26570|dip:DIP-557N	-	crc64:88F0FF95B3A8BD89	crc64:8B7F009521F72C15	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:aybUrPA5WH/mgdDx6VD8N4F/4x0559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P38911	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232	-	crc64:88F0FF95B3A8BD89	crc64:A01D24DE0078FE11	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q06698	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-32283|uniprotkb:D6VZ55|ensemblfungi:YLR419W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:yl419_yeast(display_long)|uniprotkb:YLR419W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	sgd:S000004411|interpro:IPR016135(Ubiquitin-conjugating enzyme/RWD-like)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR007502(Helicase-associated region)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR006575(RWD)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|refseq:NP_013523.3|interpro:IPR009060(UBA-like)|interpro:IPR027417|mint:Q06698|interpro:IPR035467|ensemblfungi:YLR419W(gene)|ensemblfungi:YLR419W_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0140603"(obsolete ATP hydrolysis activity)	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:E6GT4TEE/clkeR+dj2DGddwJGO4559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q6Q547	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-2052475|uniprotkb:D3DL22|ensemblfungi:YHR072W-A	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nop10_yeast(display_long)|uniprotkb:YHR072W-A(locus name)|uniprotkb:Nucleolar protein family A member 3(gene name synonym)|uniprotkb:snoRNP protein NOP10(gene name synonym)|uniprotkb:NOP10(gene name)|psi-mi:NOP10(display_short)|uniprotkb:Nucleolar protein 10(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_058135.1|sgd:S000007455|dip:DIP-5845N|mint:Q6Q547|ensemblfungi:YHR072W-A(gene)|ensemblfungi:YHR072W-A_mRNA(transcript)|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0031118"(rRNA pseudouridine synthesis)|go:"GO:0031120"(snRNA pseudouridine synthesis)|go:"GO:0031429"(box H/ACA snoRNP complex)|go:"GO:0034513"(box H/ACA snoRNA binding)|go:"GO:0070034"(telomerase RNA binding)|go:"GO:0090661"(box H/ACA telomerase RNP complex)|interpro:IPR007264(Nucleolar RNA-binding protein Nop10p)|interpro:IPR036756|rcsb pdb:1Y2Y|rcsb pdb:2AQA|rcsb pdb:3U28|rcsb pdb:3UAI	-	crc64:88F0FF95B3A8BD89	crc64:4718D35AF7911FBA	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:9m0x3DatObFwua2cbCQYMRKGqrU559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q06406	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-196|uniprotkb:D6VT10|ensemblfungi:YDR378C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:lsm6_yeast(display_long)|uniprotkb:LSM6(gene name)|psi-mi:LSM6(display_short)|uniprotkb:D9481.18(orf name)|uniprotkb:YDR378C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_010666.2|sgd:S000002786|mint:Q06406|dip:DIP-1418N|ensemblfungi:YDR378C(gene)|ensemblfungi:YDR378C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000932"(P-body)|go:"GO:0003723"(RNA binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0008033"(tRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR016487(Small nuclear ribonucleoprotein SmF)|rcsb pdb:3JCM|rcsb pdb:4C8Q|rcsb pdb:4C92|rcsb pdb:4M75|rcsb pdb:4M77|rcsb pdb:4M78|rcsb pdb:4M7A|rcsb pdb:4M7D|rcsb pdb:5GAN|rcsb pdb:5NRL|rcsb pdb:5VSU|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6ASO|reactome:R-SCE-430039	-	crc64:88F0FF95B3A8BD89	crc64:74FE40A4509CEF33	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:JQtrhOkngO6APIPCFMRnKogB96c559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P39744	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)	-	crc64:88F0FF95B3A8BD89	crc64:48C3B9AE076B9B8F	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q07896	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-36093|uniprotkb:D6VY04|uniprotkb:Q92280|ensemblfungi:YLR002C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:noc3_yeast(display_long)|uniprotkb:NOC3(gene name)|psi-mi:NOC3(display_short)|uniprotkb:YLR002C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_013102.1|sgd:S000003992|mint:Q07896|dip:DIP-4839N|ensemblfungi:YLR002C(gene)|ensemblfungi:YLR002C_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006364"(rRNA processing)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0051301"(cell division)|interpro:IPR005612(CBF)|interpro:IPR011501(Nucleolar complex-associated)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016903(Nucleolar complex-associated protein 3)|rcsb pdb:6ELZ|rcsb pdb:6EM5	-	crc64:88F0FF95B3A8BD89	crc64:4CA9461A4A1F1E9E	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:o4oPtyuw8G9RG5M4XvmbMf7L07E559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P40991	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-12110|uniprotkb:D6W1B9|ensemblfungi:YNL061W|uniprotkb:E9P914	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nop2_yeast(display_long)|uniprotkb:Nucleolar protein 2(gene name synonym)|uniprotkb:NOP2(gene name)|psi-mi:NOP2(display_short)|uniprotkb:YNA1(gene name synonym)|uniprotkb:YNL061W(locus name)|uniprotkb:N2428(orf name)|uniprotkb:YNL2428W(orf name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	interpro:IPR001678("Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p")|interpro:IPR011023(Nop2p)|interpro:IPR018314|interpro:IPR023267|interpro:IPR023273|interpro:IPR029063|interpro:IPR031341|rcsb pdb:6ELZ|rcsb pdb:6EM5|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|ensemblfungi:YNL061W(gene)|ensemblfungi:YNL061W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0001510"(RNA methylation)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0009383"("rRNA (cytosine-C5-)-methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0070475"(rRNA base methylation)|refseq:NP_014338.3|sgd:S000005005|dip:DIP-6488N|mint:P40991	-	crc64:88F0FF95B3A8BD89	crc64:6D11575703C6BB8B	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:WRZb3JW6tkMqjwK6QU+ayoI3SIc559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P47077	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-25778|uniprotkb:D6VWG7|ensemblfungi:YJL010C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nop9_yeast(display_long)|uniprotkb:YJL010C(locus name)|uniprotkb:J1357(orf name)|uniprotkb:NOP9(gene name)|psi-mi:NOP9(display_short)|uniprotkb:Pumilio domain-containing protein NOP9(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	sgd:S000003547|refseq:NP_012524.3|mint:P47077|dip:DIP-5668N|ensemblfungi:YJL010C(gene)|ensemblfungi:YJL010C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR001313(Pumilio RNA-binding region)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040000|rcsb pdb:5SVD|rcsb pdb:5WTX|rcsb pdb:5WTY|rcsb pdb:6WPI	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:zlvVoDVv08jbqC1RJk7A/DhmIbE559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q03532	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)	-	crc64:88F0FF95B3A8BD89	crc64:EE15D51A7F6BE1A2	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P40018	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-432|uniprotkb:D3DLS8|ensemblfungi:YER029C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:rsmb_yeast(display_long)|uniprotkb:SMB1(gene name)|psi-mi:SMB1(display_short)|uniprotkb:Sm protein B(gene name synonym)|uniprotkb:YER029C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	sgd:S000000831|rcsb pdb:5MPS|rcsb pdb:5MQ0|rcsb pdb:5NRL|rcsb pdb:5WSG|rcsb pdb:5Y88|rcsb pdb:5YLZ|rcsb pdb:5ZWM|rcsb pdb:5ZWN|rcsb pdb:5ZWO|rcsb pdb:6BK8|rcsb pdb:6EXN|rcsb pdb:6G90|rcsb pdb:6J6G|rcsb pdb:6J6H|rcsb pdb:6J6N|rcsb pdb:6J6Q|rcsb pdb:6N7P|rcsb pdb:6N7R|rcsb pdb:6N7X|rcsb pdb:7B9V|ensemblfungi:YER029C(gene)|ensemblfungi:YER029C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005685"(U1 snRNP)|go:"GO:0005686"(U2 snRNP)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005737"(cytoplasm)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0071004"(U2-type prespliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|rcsb pdb:3JCM|rcsb pdb:5GAM|rcsb pdb:5GAN|rcsb pdb:5GAO|rcsb pdb:5GM6|refseq:NP_010946.3|rcsb pdb:5GMK|rcsb pdb:5LJ3|rcsb pdb:5LJ5|rcsb pdb:5LQW|dip:DIP-843N|mint:P40018	-	crc64:88F0FF95B3A8BD89	crc64:0A1078D5AA241430	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:b62+dBOdvQgeE0oup4kbXbviS1U559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P53131	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131	-	crc64:88F0FF95B3A8BD89	crc64:DA8A085EC50FF430	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:45MX/uTINAjulwkB0vGKeimS+8c559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q08746	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-16026|uniprotkb:D6W2Z3|ensemblfungi:YOR294W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:rrs1_yeast(display_long)|uniprotkb:RRS1(gene name)|psi-mi:RRS1(display_short)|uniprotkb:YOR294W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YOR294W(gene)|refseq:NP_014937.1|sgd:S000005820|ensemblfungi:YOR294W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR007023(Ribosomal biogenesis regulatory protein)|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|dip:DIP-4081N|mint:Q08746	-	crc64:88F0FF95B3A8BD89	crc64:7DFF6C51DDD2ADD6	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:JyvCj+ru9yzw4WAhTwy+V5dUdxY559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q07623	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-32695|uniprotkb:D6VRE1|ensemblfungi:YDL213C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nop6_yeast(display_long)|uniprotkb:NOP6(gene name)|psi-mi:NOP6(display_short)|uniprotkb:D1018(orf name)|uniprotkb:YDL213C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_010068.1|sgd:S000002372|dip:DIP-1807N|mint:Q07623|ensemblfungi:YDL213C(gene)|ensemblfungi:YDL213C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034228|interpro:IPR035979|rcsb pdb:2MZJ	-	crc64:88F0FF95B3A8BD89	crc64:2FB6E4C4BB1542B3	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:s3xgDQZrRxBQ/rjoqVnf1HmBdgA559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P32495	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-12014|ensemblfungi:YDL208W|uniprotkb:D6VRE6	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nhp2_yeast(display_long)|uniprotkb:NHP2(gene name)|psi-mi:NHP2(display_short)|uniprotkb:YDL208W(locus name)|uniprotkb:D1045(orf name)|uniprotkb:H/ACA snoRNP protein NHP2(gene name synonym)|uniprotkb:High mobility group-like nuclear protein 2(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YDL208W(gene)|ensemblfungi:YDL208W_mRNA(transcript)|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0000493"(box H/ACA snoRNP assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0031118"(rRNA pseudouridine synthesis)|go:"GO:0031120"(snRNA pseudouridine synthesis)|go:"GO:0031429"(box H/ACA snoRNP complex)|go:"GO:0034513"(box H/ACA snoRNA binding)|interpro:IPR002415(High mobility group-like nuclear protein)|interpro:IPR004037(Ribosomal protein L7Ae)|interpro:IPR004038(Ribosomal protein L7Ae/L30e/S12e/Gadd45)|interpro:IPR018492|interpro:IPR029064|rcsb pdb:2LBW|rcsb pdb:2LBX|refseq:NP_010073.2|sgd:S000002367|mint:P32495|dip:DIP-5134N	-	crc64:88F0FF95B3A8BD89	crc64:008188132B494E5D	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:p5AQTuMF3Vvdu6HWSTYjdjjE1Vs559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q08235	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-3775|uniprotkb:D6W1Z1|ensemblfungi:YOL077C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:brx1_yeast(display_long)|uniprotkb:YOL077C(locus name)|uniprotkb:BRX1(gene name)|psi-mi:BRX1(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014565.2|sgd:S000005437|dip:DIP-6317N|mint:Q08235|ensemblfungi:YOL077C(gene)|ensemblfungi:YOL077C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR026532|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5	-	crc64:88F0FF95B3A8BD89	crc64:31466853EF0E7301	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:mPR6HWKwM6RNCRE/vezsYlCmEGY559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q06697	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-29913|uniprotkb:D6VZ54|ensemblfungi:YLR418C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:cdc73_yeast(display_long)|uniprotkb:RNA polymerase-associated protein CDC73(gene name synonym)|uniprotkb:CDC73(gene name)|psi-mi:CDC73(display_short)|uniprotkb:YLR418C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_013522.1|sgd:S000004410|dip:DIP-1148N|mint:Q06697|ensemblfungi:YLR418C(gene)|ensemblfungi:YLR418C_mRNA(transcript)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034402"(recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007852(RNA polymerase II accessory factor, Cdc73)|interpro:IPR031336|interpro:IPR038103|rcsb pdb:3V46|rcsb pdb:4DM4|reactome:R-SCE-674695|reactome:R-SCE-75955	-	crc64:88F0FF95B3A8BD89	crc64:9580B53EEFB75345	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:9d/PessN2v7cZ2ZuQW1vjTnjcaQ559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P28007	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-7321|uniprotkb:D3DL41|ensemblfungi:YHR089C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:gar1_yeast(display_long)|uniprotkb:YHR089C(locus name)|uniprotkb:GAR1(gene name)|psi-mi:GAR1(display_short)|uniprotkb:snoRNP protein GAR1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_011957.1|sgd:S000001131|mint:P28007|dip:DIP-4484N|ensemblfungi:YHR089C(gene)|ensemblfungi:YHR089C_mRNA(transcript)|go:"GO:0000454"(snoRNA guided rRNA pseudouridine synthesis)|go:"GO:0005730"(nucleolus)|go:"GO:0031120"(snRNA pseudouridine synthesis)|go:"GO:0031429"(box H/ACA snoRNP complex)|go:"GO:0034513"(box H/ACA snoRNA binding)|interpro:IPR007504(Gar1 protein RNA-binding region)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR038664|rcsb pdb:3U28|rcsb pdb:3UAI	-	crc64:88F0FF95B3A8BD89	crc64:C197FE85644DD0F8	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:wwYAG/cTAhO3HCX0PLnV0NXhWl4559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P32558	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-4334|ensemblfungi:YGL207W|uniprotkb:D6VTU8	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:spt16_yeast(display_long)|uniprotkb:SPT16(gene name)|psi-mi:SPT16(display_short)|uniprotkb:CDC68(gene name synonym)|uniprotkb:SSF1(gene name synonym)|uniprotkb:YGL207W(locus name)|uniprotkb:Facilitates chromatin transcription complex subunit SPT16(gene name synonym)|uniprotkb:Suppressor of Ty protein 16(gene name synonym)|uniprotkb:Cell division control protein 68(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	dip:DIP-2546N|ensemblfungi:YGL207W(gene)|ensemblfungi:YGL207W_mRNA(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006281"(DNA repair)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0007063"(regulation of sister chromatid cohesion)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034724"(DNA replication-independent chromatin organization)|go:"GO:0035101"(FACT complex)|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)|refseq:NP_011308.1|sgd:S000003175|mint:P32558|go:"GO:0060261"(positive regulation of transcription initiation from RNA polymerase II promoter)|interpro:IPR000994(Peptidase M24, catalytic core)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013719(Region of unknown function DUF1747, eukaryote)|interpro:IPR013953(FACT complex subunit Spt16p/Cdc68p)|interpro:IPR029148|interpro:IPR029149|interpro:IPR033825|interpro:IPR036005|interpro:IPR040258|rcsb pdb:3BIP|rcsb pdb:3BIQ|rcsb pdb:3BIT|rcsb pdb:4IOY|rcsb pdb:4WNN|reactome:R-SCE-674695|reactome:R-SCE-6796648|reactome:R-SCE-6804756|reactome:R-SCE-75955	-	crc64:88F0FF95B3A8BD89	crc64:4F01C772E299E2E6	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:BjmFZfhrj4mp5mz0vNNG1JS4Hrk559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P25586	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene)	-	crc64:88F0FF95B3A8BD89	crc64:7A7F964E2C7FD056	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P42846	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-28360|uniprotkb:D6W0N7|ensemblfungi:YNL308C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:kri1_yeast(display_long)|uniprotkb:YNL308C(locus name)|uniprotkb:N0388(orf name)|uniprotkb:KRR1-interacting protein 1(gene name synonym)|uniprotkb:KRI1(gene name)|psi-mi:KRI1(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014091.1|sgd:S000005252|dip:DIP-4073N|mint:P42846|ensemblfungi:YNL308C(gene)|ensemblfungi:YNL308C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|interpro:IPR018034|interpro:IPR024626	-	crc64:88F0FF95B3A8BD89	crc64:3B637571EDB05EA6	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:NhrYBQD07sx7vTVgiDFulg1FrAI559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P38687	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-18004|uniprotkb:D6W3C8|ensemblfungi:YPL243W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:srp68_yeast(display_long)|uniprotkb:YPL243W(locus name)|uniprotkb:SRP68(gene name)|psi-mi:SRP68(display_short)|uniprotkb:Signal recognition particle 68 kDa protein homolog(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_015081.1|sgd:S000006164|ensemblfungi:YPL243W(gene)|ensemblfungi:YPL243W_mRNA(transcript)|go:"GO:0005047"(signal recognition particle binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005786"(signal recognition particle, endoplasmic reticulum targeting)|go:"GO:0006614"(SRP-dependent cotranslational protein targeting to membrane)|go:"GO:0008312"(7S RNA binding)|go:"GO:0030942"(endoplasmic reticulum signal peptide binding)|go:"GO:0034399"(nuclear periphery)|interpro:IPR026258|interpro:IPR034652|interpro:IPR038253|reactome:R-SCE-1799339|dip:DIP-6742N|mint:P38687	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:4cVGRebXokCZUy7he9W9JVzJJME559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P19454	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-9548|ensemblfungi:YOR061W|uniprotkb:D6W2C4	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:csk22_yeast(display_long)|uniprotkb:CKA2(gene name)|psi-mi:CKA2(display_short)|uniprotkb:YOR29-12(orf name)|uniprotkb:YOR061W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YOR061W(gene)|ensemblfungi:YOR061W_mRNA(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0071470"(cellular response to osmotic stress)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|refseq:NP_014704.1|sgd:S000005587|mint:P19454|dip:DIP-1038N	-	crc64:88F0FF95B3A8BD89	crc64:30E214BD852824D0	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:E39eioYivVEqVSUhL99a2iGvisg559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P33399	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-10046|uniprotkb:D6VRU5|ensemblfungi:YDL051W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:lhp1_yeast(display_long)|uniprotkb:LAH1(gene name synonym)|uniprotkb:YDL051W(locus name)|uniprotkb:LHP1(gene name)|psi-mi:LHP1(display_short)|uniprotkb:YLA1(gene name synonym)|uniprotkb:La ribonucleoprotein(gene name synonym)|uniprotkb:La autoantigen homolog(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_010232.1|sgd:S000002209|ensemblfungi:YDL051W_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|ensemblfungi:YDL051W(gene)|go:"GO:0005730"(nucleolus)|go:"GO:0008033"(tRNA processing)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002344(Lupus La protein)|interpro:IPR006630(RNA-binding protein Lupus La)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|interpro:IPR036388|interpro:IPR036390|dip:DIP-6444N|mint:P33399	-	crc64:88F0FF95B3A8BD89	crc64:43CDB2E6C740978D	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:2pKzxTXJdins+GBpjC8PHGNoDYY559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P02309	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-8113|uniprotkb:D6VQ10|ensemblfungi:YBR009C|ensemblfungi:YNL030W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:h4_yeast(display_long)|uniprotkb:N2752(orf name)|uniprotkb:YBR0122(orf name)|uniprotkb:YBR009C(locus name)|uniprotkb:YNL030W(locus name)|uniprotkb:HHF1(gene name)|psi-mi:HHF1(display_short)|uniprotkb:HHF2(gene name)|psi-mi:HHF2(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_009563.1|refseq:NP_014368.1|sgd:S000000213|sgd:S000004975|dip:DIP-418N|mint:P02309|ensemblfungi:YBR009C(gene)|ensemblfungi:YBR009C_mRNA(transcript)|ensemblfungi:YNL030W(gene)|ensemblfungi:YNL030W_mRNA(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0006333"(chromatin assembly or disassembly)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0034729"(histone H3-K79 methylation)|go:"GO:0043935"(sexual sporulation resulting in formation of a cellular spore)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|interpro:IPR001951(Histone H4)|interpro:IPR009072(Histone-fold)|interpro:IPR019809|interpro:IPR035425|rcsb pdb:1E6I|rcsb pdb:1ID3|rcsb pdb:1Q1A|rcsb pdb:1SZC|rcsb pdb:1SZD|rcsb pdb:2DVQ|rcsb pdb:2DVR|rcsb pdb:2E3K|rcsb pdb:2FSB|rcsb pdb:2H2H|rcsb pdb:2L5A|rcsb pdb:2QQF|rcsb pdb:2QQG|rcsb pdb:3TO6|rcsb pdb:4JJN|rcsb pdb:4KUD|rcsb pdb:4PSX|rcsb pdb:4TWI|rcsb pdb:4TWJ|rcsb pdb:5W0V|rcsb pdb:5ZBA|rcsb pdb:5ZBB|rcsb pdb:6GEJ|rcsb pdb:6GEN|rcsb pdb:6QLD|rcsb pdb:6RXJ|rcsb pdb:6RXK|rcsb pdb:6RXL|rcsb pdb:6RXM|rcsb pdb:6RXO|rcsb pdb:6RXP|rcsb pdb:6RXQ|rcsb pdb:6RXR|rcsb pdb:7K78|rcsb pdb:7K7G|reactome:R-SCE-2299718|reactome:R-SCE-2559580|reactome:R-SCE-3214842|reactome:R-SCE-3214847|reactome:R-SCE-3214858|reactome:R-SCE-4551638|reactome:R-SCE-9018519	-	crc64:88F0FF95B3A8BD89	crc64:69B7D1F89E62DE41	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:wGtUrumyxGKsW9BEzkBW3FwvwUo559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P02294	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-8094|uniprotkb:D6VQ00|ensemblfungi:YBL002W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:h2b2_yeast(display_long)|uniprotkb:HTB2(gene name)|psi-mi:HTB2(display_short)|uniprotkb:H2B2(gene name synonym)|uniprotkb:YBL002W(locus name)|uniprotkb:YBL0104(orf name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_009553.1|sgd:S000000098|dip:DIP-3897N|mint:P02294|ensemblfungi:YBL002W(gene)|ensemblfungi:YBL002W_mRNA(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0006333"(chromatin assembly or disassembly)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR000558(Histone H2B)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1ID3|rcsb pdb:2FSB|rcsb pdb:4JJN|rcsb pdb:6QLD|reactome:R-SCE-2299718|reactome:R-SCE-2559580|reactome:R-SCE-3214847|reactome:R-SCE-5689880|reactome:R-SCE-9018519	-	crc64:88F0FF95B3A8BD89	crc64:3DCC26FF124D71E8	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:Rsbj3mnZNARxJiKD2xFntHJs3fY559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P04912	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-8076|uniprotkb:D6VPZ9|ensemblfungi:YBL003C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:h2a2_yeast(display_long)|uniprotkb:HTA2(gene name)|psi-mi:HTA2(display_short)|uniprotkb:H2A2(gene name synonym)|uniprotkb:YBL003C(locus name)|uniprotkb:YBL0103(orf name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_009552.1|sgd:S000000099|dip:DIP-6377N|mint:P04912|ensemblfungi:YBL003C(gene)|ensemblfungi:YBL003C_mRNA(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0006281"(DNA repair)|go:"GO:0006333"(chromatin assembly or disassembly)|go:"GO:0006342"|go:"GO:0031298"(replication fork protection complex)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR002119(Histone H2A)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|interpro:IPR032454|interpro:IPR032458|rcsb pdb:4JJN|rcsb pdb:4KUD	-	crc64:88F0FF95B3A8BD89	crc64:E808C94A0363CD53	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:67sL3/OTkJqPH6XEIjE5SsZqUPg559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P20447	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-5608|uniprotkb:D6VU66|ensemblfungi:YGL078C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:dbp3_yeast(display_long)|uniprotkb:YGL078C(locus name)|uniprotkb:DBP3(gene name)|psi-mi:DBP3(display_short)|uniprotkb:DEAD box protein 3(gene name synonym)|uniprotkb:Helicase CA3(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	sgd:S000003046|refseq:NP_011437.3|dip:DIP-2668N|mint:P20447|ensemblfungi:YGL078C(gene)|ensemblfungi:YGL078C_mRNA(transcript)|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:9ltHUfhcU8nfN3bxsmkabo8A2L4559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P25555	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-7410|uniprotkb:D6VR01|ensemblfungi:YCL011C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:gbp2_yeast(display_long)|uniprotkb:GBP2(gene name)|psi-mi:GBP2(display_short)|uniprotkb:RLF6(gene name synonym)|uniprotkb:YCL011C(locus name)|uniprotkb:YCL11C(orf name)|uniprotkb:RAP1 localization factor 6(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_009916.1|sgd:S000000517|ensemblfungi:YCL011C(gene)|ensemblfungi:YCL011C_mRNA(transcript)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003682"(chromatin binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|mint:P25555|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0043047"(single-stranded telomeric DNA binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|dip:DIP-2735N|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|rcsb pdb:2MZQ	-	crc64:88F0FF95B3A8BD89	crc64:5341D7A0E07F208C	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:0fURlZ6JcMWvS0mSxpR2LZ8uDrE559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P32480	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-8323|uniprotkb:D6W2A5|ensemblfungi:YOR038C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:hir2_yeast(display_long)|uniprotkb:HIR2(gene name)|psi-mi:HIR2(display_short)|uniprotkb:YOR038C(locus name)|uniprotkb:OR26.31(orf name)|uniprotkb:Histone transcription regulator 2(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014681.1|sgd:S000005564|mint:P32480|dip:DIP-2366N|ensemblfungi:YOR038C(gene)|ensemblfungi:YOR038C_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000417"(HIR complex)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016480"(negative regulation of transcription by RNA polymerase III)|interpro:IPR011494(TUP1-like enhancer of split)|interpro:IPR031120|interpro:IPR036322	-	crc64:88F0FF95B3A8BD89	crc64:C77D677BF424680D	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:QhQfVbm7uHiW5zk9XHvVz2mJWYw559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q08208	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979	-	crc64:88F0FF95B3A8BD89	crc64:338F73B13DAE3282	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P36049	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226	-	crc64:88F0FF95B3A8BD89	crc64:4A11F6CDF779DB5A	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P36160	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160	-	crc64:88F0FF95B3A8BD89	crc64:4ACE390E6B1700EA	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:04/baMWvwagXiHur91JZhUhoUuo559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P25617	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-375711|uniprotkb:Q8NIM2|uniprotkb:D6VR24|ensemblfungi:YCR016W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:ycq6_yeast(display_long)|uniprotkb:YCR016W(locus name)|uniprotkb:YCR16W(orf name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YCR016W(gene)|ensemblfungi:YCR016W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|refseq:NP_009942.2|sgd:S000000609|interpro:IPR019327|mint:P25617|dip:DIP-4766N	-	crc64:88F0FF95B3A8BD89	crc64:55A72BB7C7172C63	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:ribMAXd/QjtciwD8iIaIqAzhA7s559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P38351	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q03973	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-33047|uniprotkb:D6VSF6|ensemblfungi:YDR174W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:hmo1_yeast(display_long)|uniprotkb:HMO1(gene name)|psi-mi:HMO1(display_short)|uniprotkb:High spontaneous mutagenesis protein 2(gene name synonym)|uniprotkb:HSM2(gene name synonym)|uniprotkb:YD9395.07(orf name)|uniprotkb:YDR174W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_010459.1|sgd:S000002581|mint:Q03973|dip:DIP-1687N|ensemblfungi:YDR174W(gene)|ensemblfungi:YDR174W_mRNA(transcript)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0001174"(transcriptional start site selection at RNA polymerase II promoter)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006265"(DNA topological change)|go:"GO:0006323"(DNA packaging)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0008301"(DNA binding, bending)|go:"GO:0030261"(chromosome condensation)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0060962"(regulation of ribosomal protein gene transcription by RNA polymerase II)|go:"GO:0070550"(rDNA condensation)|go:"GO:2001034"(positive regulation of double-strand break repair via nonhomologous end joining)|interpro:IPR009071(High mobility group box, HMG)|interpro:IPR036910|reactome:R-SCE-140342|reactome:R-SCE-5620971|reactome:R-SCE-5686938|reactome:R-SCE-6798695	-	crc64:88F0FF95B3A8BD89	crc64:3D6DCD56A28B7D77	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:9sHGPuUbReXRmvQYqKvnd4fWBd4559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P38688	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-18011|uniprotkb:D6W3G0|ensemblfungi:YPL210C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:srp72_yeast(display_long)|uniprotkb:YPL210C(locus name)|uniprotkb:SRP72(gene name)|psi-mi:SRP72(display_short)|uniprotkb:Signal recognition particle 72 kDa protein homolog(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_015114.2|sgd:S000006131|reactome:R-SCE-1799339|ensemblfungi:YPL210C(gene)|ensemblfungi:YPL210C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005786"(signal recognition particle, endoplasmic reticulum targeting)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006614"(SRP-dependent cotranslational protein targeting to membrane)|go:"GO:0008312"(7S RNA binding)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013699(Signal recognition particle, SRP72 subunit, RNA-binding)|interpro:IPR026270|dip:DIP-6763N|mint:P38688	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:yhhZC25wybDaN4LOKK6P4/TPnRE559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q01560	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-12114|uniprotkb:D6VT60|ensemblfungi:YDR432W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nop3_yeast(display_long)|uniprotkb:MTR13(gene name synonym)|uniprotkb:MTS1(gene name synonym)|uniprotkb:Mitochondrial targeting suppressor 1 protein(gene name synonym)|uniprotkb:Nuclear polyadenylated RNA-binding protein 1(gene name synonym)|uniprotkb:NPL3(gene name)|psi-mi:NPL3(display_short)|uniprotkb:NAB1(gene name synonym)|uniprotkb:YDR432W(locus name)|uniprotkb:D9461.19(orf name)|uniprotkb:NOP3(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YDR432W(gene)|ensemblfungi:YDR432W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0006415"(translational termination)|go:"GO:0008143"("poly(A) binding")|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0031370"(eukaryotic initiation factor 4G binding)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0042802"(identical protein binding)|go:"GO:2000805"("negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled")|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034166|interpro:IPR035979|rcsb pdb:2JD5|rcsb pdb:2JVO|rcsb pdb:2JVR|rcsb pdb:2OSQ|rcsb pdb:2OSR|refseq:NP_010720.3|sgd:S000002840|dip:DIP-6464N	-	crc64:88F0FF95B3A8BD89	crc64:024439E4B6578787	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:R/g8r9x82rdG8AThC5VQcbgY6u4559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q06142	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-9145|ensemblfungi:YLR347C|uniprotkb:D6VYY6	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:imb1_yeast(display_long)|uniprotkb:KAP95(gene name)|psi-mi:KAP95(display_short)|uniprotkb:YLR347C(locus name)|uniprotkb:L8300.15(orf name)|uniprotkb:Karyopherin subunit beta-1(gene name synonym)|uniprotkb:Karyopherin-95(gene name synonym)|uniprotkb:Importin-95(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	rcsb pdb:3EA5|rcsb pdb:3ND2|rcsb pdb:5OWU|reactome:R-SCE-2995383|reactome:R-SCE-6798695|ensemblfungi:YLR347C(gene)|ensemblfungi:YLR347C_mRNA(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005643"(nuclear pore)|go:"GO:0005737"(cytoplasm)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006607"(NLS-bearing protein import into nucleus)|go:"GO:0006656"(phosphatidylcholine biosynthetic process)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0042564"(NLS-dependent protein nuclear import complex)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0046822"(regulation of nucleocytoplasmic transport)|go:"GO:0051028"(mRNA transport)|go:"GO:0051292"(nuclear pore complex assembly)|go:"GO:0060188"(regulation of protein desumoylation)|go:"GO:0061608"(nuclear import signal receptor activity)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0097718"(disordered domain specific binding)|interpro:IPR000225(Armadillo)|interpro:IPR001494(Importin-beta, N-terminal)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR040122|rcsb pdb:2BKU|go:"GO:0006612"(protein targeting to membrane)|refseq:NP_013451.1|sgd:S000004339|dip:DIP-2357N|mint:Q06142	-	crc64:88F0FF95B3A8BD89	crc64:ED530F5313E75B06	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:ebWeXaUKiBFWgjdv9s2pz1GIqgI559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q05022	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-16011|uniprotkb:D6W054|ensemblfungi:YMR229C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:rrp5_yeast(display_long)|uniprotkb:RRP5(gene name)|psi-mi:RRP5(display_short)|uniprotkb:FMI1(gene name synonym)|uniprotkb:YMR229C(locus name)|uniprotkb:YM9959.11C(orf name)|uniprotkb:Ribosomal RNA-processing protein 5(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein RRP5(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_013956.1|sgd:S000004842|ensemblfungi:YMR229C(gene)|ensemblfungi:YMR229C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034463"(90S preribosome assembly)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0034513"(box H/ACA snoRNA binding)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR003029(S1, RNA binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR022967|rcsb pdb:5C9S|rcsb pdb:5NLG|rcsb pdb:5WLC|rcsb pdb:5WWM|rcsb pdb:5WYJ|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-6535N|mint:Q05022	-	crc64:88F0FF95B3A8BD89	crc64:39BF46E5587B3B0A	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:FUIsTk3NLRDu8llnVgX5cDLAbB8559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P38439	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-10108|uniprotkb:D6W2I1|ensemblfungi:YOR123C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:leo1_yeast(display_long)|uniprotkb:O3278(orf name)|uniprotkb:YOR3278C(orf name)|uniprotkb:YOR123C(locus name)|uniprotkb:LEO1(gene name)|psi-mi:LEO1(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014766.1|sgd:S000005649|ensemblfungi:YOR123C(gene)|ensemblfungi:YOR123C_mRNA(transcript)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0006325"(chromatin organization)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0080182"(histone H3-K4 trimethylation)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR007149(Leo1-like protein)|go:"GO:0005634"(nucleus)|reactome:R-SCE-674695|reactome:R-SCE-75955|dip:DIP-4143N|mint:P38439	-	crc64:88F0FF95B3A8BD89	crc64:ABDE3D7D5A2C78A5	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:qhB5pVP3l4WqXtp3JhmPsxEVHE0559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P06634	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-5744|uniprotkb:D6W2R0|ensemblfungi:YOR204W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:ded1_yeast(display_long)|uniprotkb:DED1(gene name)|psi-mi:DED1(display_short)|uniprotkb:SPP81(gene name synonym)|uniprotkb:YOR204W(locus name)|uniprotkb:DEAD box protein 1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	sgd:S000005730|refseq:NP_014847.3|dip:DIP-5820N|mint:P06634|ensemblfungi:YOR204W(gene)|ensemblfungi:YOR204W_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006413"(translational initiation)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0031370"(eukaryotic initiation factor 4G binding)|go:"GO:0033592"(RNA strand annealing activity)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1901195"(positive regulation of formation of translation preinitiation complex)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR044763|reactome:R-SCE-6798695	-	crc64:88F0FF95B3A8BD89	crc64:B6722D94C03BFA4B	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:FkldumX6m5gBuuaG09aTJ0kuMZM559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q12460	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-17148|ensemblfungi:YLR197W|uniprotkb:D6VYK0	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nop56_yeast(display_long)|uniprotkb:SIK1(gene name synonym)|uniprotkb:Ribosome biosynthesis protein SIK1(gene name synonym)|uniprotkb:YLR197W(locus name)|uniprotkb:L8167.9(orf name)|uniprotkb:NOP56(gene name)|psi-mi:NOP56(display_short)|uniprotkb:Suppressor of I kappa b protein 1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YLR197W(gene)|ensemblfungi:YLR197W_mRNA(transcript)|go:"GO:0000154"(rRNA modification)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|refseq:NP_013298.1|sgd:S000004187|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-4405N|mint:Q12460	-	crc64:88F0FF95B3A8BD89	crc64:F8522A5870EF4842	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:l3UAmoOUECH1uov6nv7MSwSv/3s559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q02821	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-1797|uniprotkb:D6W0Z8|ensemblfungi:YNL189W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:ima1_yeast(display_long)|uniprotkb:SRP1(gene name)|psi-mi:SRP1(display_short)|uniprotkb:KAP60(gene name synonym)|uniprotkb:YNL189W(locus name)|uniprotkb:N1606(orf name)|uniprotkb:Karyopherin subunit alpha(gene name synonym)|uniprotkb:Karyopherin-60(gene name synonym)|uniprotkb:Serine-rich RNA polymerase I suppressor protein(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014210.1|sgd:S000005133|dip:DIP-728N|mint:Q02821|ensemblfungi:YNL189W(gene)|ensemblfungi:YNL189W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006607"(NLS-bearing protein import into nucleus)|go:"GO:0006612"(protein targeting to membrane)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0031144"(proteasome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042564"(NLS-dependent protein nuclear import complex)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0061608"(nuclear import signal receptor activity)|go:"GO:0097718"(disordered domain specific binding)|interpro:IPR000225(Armadillo)|interpro:IPR002652(Importin-alpha-like, importin-beta-binding region)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR024931|interpro:IPR032413|interpro:IPR036975|rcsb pdb:1BK5|rcsb pdb:1BK6|rcsb pdb:1EE4|rcsb pdb:1EE5|rcsb pdb:1UN0|rcsb pdb:1WA5|rcsb pdb:2C1T|rcsb pdb:4PVZ|rcsb pdb:4XZR|rcsb pdb:5H2W|rcsb pdb:5H2X|rcsb pdb:5T94	-	crc64:88F0FF95B3A8BD89	crc64:8D3A0CB76F2E7C00	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:NyzC93xnBCb8DX/AH346lwg4u2A559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P21304	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-14328|uniprotkb:D6VYJ9|ensemblfungi:YLR196W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:pwp1_yeast(display_long)|uniprotkb:L8167.10(orf name)|uniprotkb:YLR196W(locus name)|uniprotkb:PWP1(gene name)|psi-mi:PWP1(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_013297.1|sgd:S000004186|ensemblfungi:YLR196W(gene)|ensemblfungi:YLR196W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR036322|interpro:IPR044285|mint:P21304|dip:DIP-4203N	-	crc64:88F0FF95B3A8BD89	crc64:FC0189B289494AB5	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:Q1nPXtlkpIw8JosaiYX0PSVNaSw559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q12499	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-12126|uniprotkb:D6W309|ensemblfungi:YOR310C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nop58_yeast(display_long)|uniprotkb:Nucleolar protein 5(gene name synonym)|uniprotkb:NOP58(gene name)|psi-mi:NOP58(display_short)|uniprotkb:NOP5(gene name synonym)|uniprotkb:YOR310C(locus name)|uniprotkb:O6108(orf name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YOR310C(gene)|ensemblfungi:YOR310C_mRNA(transcript)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0017069"(snRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:1902570"(protein localization to nucleolus)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-4570464|reactome:R-SCE-6791226|rcsb pdb:6ZQC|refseq:NP_014955.1|sgd:S000005837|dip:DIP-5843N|mint:Q12499	-	crc64:88F0FF95B3A8BD89	crc64:8A2889448B2A19E2	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:Dtk1A6GOVO3KgTak8cTHjO+eDQ4559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:Q12159	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-29516|uniprotkb:D6VT14|ensemblfungi:YDR381W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:yra1_yeast(display_long)|uniprotkb:YRA1(gene name)|psi-mi:YRA1(display_short)|uniprotkb:D9481.2(orf name)|uniprotkb:D9509.1(orf name)|uniprotkb:YDR381W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_010669.1|sgd:S000002789|dip:DIP-1791N|mint:Q12159|ensemblfungi:YDR381W(gene)|ensemblfungi:YDR381W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0003723"(RNA binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0043462"(regulation of ATP-dependent activity)|go:"GO:1902281"(negative regulation of RNA helicase activity)|go:"GO:1990119"(RNA helicase inhibitor activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034357|interpro:IPR035979|rcsb pdb:5SUP	-	crc64:88F0FF95B3A8BD89	crc64:480B5B6DC0D14BE9	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:pLiU4X4uQRi7nw6fxaSJW7Ppum4559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P15646	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226	-	crc64:88F0FF95B3A8BD89	crc64:56A8B958A7B6066E	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P04147	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-12823|ensemblfungi:YER165W|uniprotkb:D3DM73	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:pabp_yeast(display_long)|uniprotkb:PAB1(gene name)|psi-mi:PAB1(display_short)|uniprotkb:ARS consensus-binding protein ACBP-67(gene name synonym)|uniprotkb:Polyadenylate tail-binding protein(gene name synonym)|uniprotkb:YER165W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YER165W(gene)|go:"GO:0006446"(regulation of translational initiation)|go:"GO:0008143"("poly(A) binding")|ensemblfungi:YER165W_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0006397"(mRNA processing)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0008428"(ribonuclease inhibitor activity)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0051028"(mRNA transport)|go:"GO:0060211"("regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:1990841"(promoter-specific chromatin binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002004(Polyadenylate-binding protein/Hyperplastic disc protein)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR006515(Polyadenylate binding protein, human types 1, 2, 3, 4)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|interpro:IPR036053|rcsb pdb:1IFW|rcsb pdb:6R5K|reactome:R-SCE-429947|reactome:R-SCE-72649|reactome:R-SCE-975956|reactome:R-SCE-975957|reactome:R-SCE-156827|refseq:NP_011092.1|sgd:S000000967|mint:P04147|dip:DIP-2275N	-	crc64:88F0FF95B3A8BD89	crc64:4F97E494753E17C7	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:6ZjESO1CUgykLdGVlTuZoFRwqyg559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P33322	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-4105|ensemblfungi:YLR175W|uniprotkb:D6VYH9	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:cbf5_yeast(display_long)|uniprotkb:Small nucleolar RNP protein CBF5(gene name synonym)|uniprotkb:L9470.11(orf name)|uniprotkb:YLR175W(locus name)|uniprotkb:CBF5(gene name)|psi-mi:CBF5(display_short)|uniprotkb:Centromere/microtubule-binding protein CBF5(gene name synonym)|uniprotkb:Centromere-binding factor 5(gene name synonym)|uniprotkb:H/ACA snoRNP protein CBF5(gene name synonym)|uniprotkb:p64'(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YLR175W(gene)|ensemblfungi:YLR175W_mRNA(transcript)|go:"GO:0000154"(rRNA modification)|go:"GO:0000495"(box H/ACA RNA 3'-end processing)|go:"GO:0000775"(chromosome, centromeric region)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005874"(microtubule)|go:"GO:0006364"(rRNA processing)|go:"GO:0007049"(cell cycle)|go:"GO:0009982"(pseudouridine synthase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031118"(rRNA pseudouridine synthesis)|go:"GO:0031120"(snRNA pseudouridine synthesis)|go:"GO:0031429"(box H/ACA snoRNP complex)|go:"GO:0051301"(cell division)|go:"GO:1990481"(mRNA pseudouridine synthesis)|refseq:NP_013276.1|sgd:S000004165|dip:DIP-4472N|mint:P33322|interpro:IPR002478(PUA)|interpro:IPR002501(tRNA pseudouridine synthase B, N-terminal)|interpro:IPR004521(Uncharacterized domain 2)|interpro:IPR004802(Putative rRNA pseudouridine synthase)|interpro:IPR012960(DKCLD)|interpro:IPR015947(PUA-like)|interpro:IPR020103|interpro:IPR032819|interpro:IPR036974|rcsb pdb:3U28|rcsb pdb:3UAI|rcsb pdb:3ZV0|reactome:R-SCE-171319	-	crc64:88F0FF95B3A8BD89	crc64:D356B39FDCC32E2D	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:cBheN/I3bpmiXhl3cWX8OT/YWco559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P39015	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-11238|uniprotkb:D6VYE5|ensemblfungi:YLR150W	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:stm1_yeast(display_long)|uniprotkb:STM1(gene name)|psi-mi:STM1(display_short)|uniprotkb:MPT4(gene name synonym)|uniprotkb:STO1(gene name synonym)|uniprotkb:YLR150W(locus name)|uniprotkb:L9634.1(orf name)|uniprotkb:GU4 nucleic-binding protein 2(gene name synonym)|uniprotkb:Triplex-binding protein 1(gene name synonym)|uniprotkb:3BP1(gene name synonym)|uniprotkb:Ribosomal subunits association factor(gene name synonym)|uniprotkb:POP2 multicopy suppressor protein 4(gene name synonym)|uniprotkb:TOM1 suppressor protein 1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YLR150W(gene)|ensemblfungi:YLR150W_mRNA(transcript)|go:"GO:0000723"(telomere maintenance)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005844"(polysome)|go:"GO:0006414"(translational elongation)|go:"GO:0031929"(TOR signaling)|go:"GO:0042162"(telomeric DNA binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043558"(regulation of translational initiation in response to stress)|go:"GO:0045142"(triplex DNA binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR006861(Hyaluronan/mRNA binding protein)|interpro:IPR019084|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V88|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:5DAT|rcsb pdb:5DC3|rcsb pdb:4U3M|rcsb pdb:5DGE|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5I4L|rcsb pdb:5LYB|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:5TGA|rcsb pdb:5TGM|rcsb pdb:6HHQ|refseq:NP_013251.1|sgd:S000004140|mint:P39015|dip:DIP-1675N	-	crc64:88F0FF95B3A8BD89	-	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:IIt/rBlacZtFUA89yFNrRSkm0wA559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P89105	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-5283|uniprotkb:O14409|uniprotkb:Q07332|uniprotkb:Q08292|uniprotkb:D6W1S4|ensemblfungi:YOL145C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:ctr9_yeast(display_long)|uniprotkb:CTR9(gene name)|psi-mi:CTR9(display_short)|uniprotkb:CDP1(gene name synonym)|uniprotkb:Cln three-requiring protein 9(gene name synonym)|uniprotkb:Centromere-binding factor 1-dependent protein 1(gene name synonym)|uniprotkb:YOL145C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014496.2|sgd:S000005505|dip:DIP-2814N|mint:P89105|ensemblfungi:YOL145C(gene)|ensemblfungi:YOL145C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0035327"|go:"GO:0045142"(triplex DNA binding)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0060260"(regulation of transcription initiation from RNA polymerase II promoter)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR031101|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955	-	crc64:88F0FF95B3A8BD89	crc64:F794ECBAD26D4820	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:85qAqldtQL8T7JBgNxrvAYtHhd0559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P36047	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-16783|ensemblfungi:YKL193C|uniprotkb:D6VX07	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:sds22_yeast(display_long)|uniprotkb:YKL193C(locus name)|uniprotkb:SDS22(gene name)|psi-mi:SDS22(display_short)|uniprotkb:EGP1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	interpro:IPR032675|interpro:IPR003591(Leucine-rich repeat, typical subtype)|ensemblfungi:YKL193C(gene)|ensemblfungi:YKL193C_mRNA(transcript)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0004865"(protein serine/threonine phosphatase inhibitor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0007059"(chromosome segregation)|go:"GO:0051301"(cell division)|go:"GO:0051457"(maintenance of protein location in nucleus)|go:"GO:0072542"(protein phosphatase activator activity)|interpro:IPR001611(Leucine-rich repeat)|refseq:NP_012728.1|sgd:S000001676|dip:DIP-2378N|mint:P36047	-	crc64:88F0FF95B3A8BD89	crc64:1EF434C7276ABAEA	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:0EB+IWHQJapt77CfEgNmk733koU559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P22147	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-9642|ensemblfungi:YGL173C|uniprotkb:D6VTX9	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:xrn1_yeast(display_long)|uniprotkb:XRN1(gene name)|psi-mi:XRN1(display_short)|uniprotkb:DNA strand transfer protein beta(gene name synonym)|uniprotkb:DST2(gene name synonym)|uniprotkb:"KAR(-)-enhancing mutation protein"(gene name synonym)|uniprotkb:KEM1(gene name synonym)|uniprotkb:RAR5(gene name synonym)|uniprotkb:SEP1(gene name synonym)|uniprotkb:SKI1(gene name synonym)|uniprotkb:Strand exchange protein 1(gene name synonym)|uniprotkb:p175(gene name synonym)|uniprotkb:G1645(orf name)|uniprotkb:YGL173C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YGL173C(gene)|ensemblfungi:YGL173C_mRNA(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0000741"(karyogamy)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0003682"(chromatin binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0004534"(5'-3' exoribonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005874"(microtubule)|go:"GO:0006364"(rRNA processing)|go:"GO:0006413"(translational initiation)|go:"GO:0007089"(traversing start control point of mitotic cell cycle)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0016078"(tRNA catabolic process)|go:"GO:0016242"(negative regulation of macroautophagy)|go:"GO:0031370"(eukaryotic initiation factor 4G binding)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0060261"(positive regulation of transcription initiation from RNA polymerase II promoter)|go:"GO:0061157"(mRNA destabilization)|go:"GO:0070479"(nuclear-transcribed mRNA catabolic process, 5'-3' exonucleolytic nonsense-mediated decay)|go:"GO:0070651"(nonfunctional rRNA decay)|go:"GO:0090512"(eisosome membrane domain/MCC)|interpro:IPR004859(Putative 5-3 exonuclease)|interpro:IPR014722(Translation protein SH3-like, subgroup)|interpro:IPR016494(5'-3' exoribonuclease 1)|interpro:IPR027073|interpro:IPR040486|interpro:IPR040992|interpro:IPR041106|interpro:IPR041385|interpro:IPR041412|rcsb pdb:6Q8Y|reactome:R-SCE-450385|reactome:R-SCE-450513|refseq:NP_011342.1|sgd:S000003141|dip:DIP-656N|mint:P22147	-	crc64:88F0FF95B3A8BD89	crc64:49C2EDAF73D3EB92	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:KtP2KGy66BwhdbfNgZdriG0i6Ts559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P10080	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-18146|uniprotkb:D3DKT4|ensemblfungi:YHL034C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:ssbp1_yeast(display_long)|uniprotkb:YHL034C(locus name)|uniprotkb:SBP1(gene name)|psi-mi:SBP1(display_short)|uniprotkb:SSBR1(gene name synonym)|uniprotkb:SSB1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	go:"GO:0017148"(negative regulation of translation)|refseq:NP_011829.1|sgd:S000001026|go:"GO:0032055"(negative regulation of translation in response to stress)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|go:"GO:0031370"(eukaryotic initiation factor 4G binding)|ensemblfungi:YHL034C(gene)|ensemblfungi:YHL034C_mRNA(transcript)|go:"GO:0000932"(P-body)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0010494"(cytoplasmic stress granule)|dip:DIP-6824N|mint:P10080	-	crc64:88F0FF95B3A8BD89	crc64:FF740B206DDE5EC8	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:8AgAdyv7G/nPzGOhgIq2XwqvXt4559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P27476	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-12274|ensemblfungi:YGR159C|uniprotkb:D6VUT9	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nsr1_yeast(display_long)|uniprotkb:NSR1(gene name)|psi-mi:NSR1(display_short)|uniprotkb:YGR159C(locus name)|uniprotkb:G7001(orf name)|uniprotkb:p67(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YGR159C(gene)|ensemblfungi:YGR159C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034276|interpro:IPR035979|interpro:IPR034272|refseq:NP_011675.1|sgd:S000003391|mint:P27476|dip:DIP-5537N	-	crc64:88F0FF95B3A8BD89	crc64:90DEEE7BBC20BC0C	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:q0/AgJC55iTpn/5kCsxal2kQ7Ls559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P41818	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-7629|uniprotkb:D6W0D8|ensemblfungi:YMR311C	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:glc8_yeast(display_long)|uniprotkb:YM9924.03C(orf name)|uniprotkb:YMR311C(locus name)|uniprotkb:GLC8(gene name)|psi-mi:GLC8(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	refseq:NP_014042.1|sgd:S000004928|mint:P41818|dip:DIP-2349N|ensemblfungi:YMR311C(gene)|ensemblfungi:YMR311C_mRNA(transcript)|go:"GO:0004864"(protein phosphatase inhibitor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005978"(glycogen biosynthetic process)|go:"GO:0007059"(chromosome segregation)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0009966"(regulation of signal transduction)|go:"GO:0043666"(regulation of phosphoprotein phosphatase activity)|interpro:IPR007062("Protein phosphatase inhibitor 2 (IPP-2)")	-	crc64:88F0FF95B3A8BD89	crc64:D4017CA8B3B089C2	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:uh8sU+F6AfAhShTTz9CBhb27Tw8559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P32598	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-13715|ensemblfungi:YER133W|uniprotkb:D3DM39	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:pp12_yeast(display_long)|uniprotkb:GLC7(gene name)|psi-mi:GLC7(display_short)|uniprotkb:CID1(gene name synonym)|uniprotkb:DIS2(gene name synonym)|uniprotkb:YER133W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YER133W(gene)|ensemblfungi:YER133W_mRNA(transcript)|go:"GO:0000076"(DNA replication checkpoint signaling)|go:"GO:0000077"(DNA damage checkpoint signaling)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000776"(kinetochore)|go:"GO:0001400"(mating projection base)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005847"(mRNA cleavage and polyadenylation specificity factor complex)|go:"GO:0005935"(cellular bud neck)|go:"GO:0005977"(glycogen metabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006873"(cellular ion homeostasis)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0007059"(chromosome segregation)|go:"GO:0007094"(mitotic spindle assembly checkpoint signaling)|go:"GO:0007116"(regulation of cell budding)|go:"GO:0007346"(regulation of mitotic cell cycle)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0009408"(response to heat)|go:"GO:0005816"(spindle pole body)|go:"GO:0016576"(histone dephosphorylation)|go:"GO:0030437"(ascospore formation)|go:"GO:0031297"(replication fork processing)|go:"GO:0032153"(cell division site)|go:"GO:0034501"(protein localization to kinetochore)|go:"GO:0035307"(positive regulation of protein dephosphorylation)|go:"GO:0046872"(metal ion binding)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070873"(regulation of glycogen metabolic process)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:1901901"(regulation of protein localization to cell division site involved in cytokinesis)|go:"GO:1903501"(positive regulation of mitotic actomyosin contractile ring assembly)|go:"GO:2000370"(positive regulation of clathrin-dependent endocytosis)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|interpro:IPR031675|interpro:IPR037981|go:"GO:0070940"(dephosphorylation of RNA polymerase II C-terminal domain)|sgd:S000000935|refseq:NP_011059.3|mint:P32598|dip:DIP-1336N	-	crc64:88F0FF95B3A8BD89	crc64:71B20E3A4ED93235	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:wXXOB38if1fxEN0yLxeYTCXsuyU559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P53617	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N	-	crc64:88F0FF95B3A8BD89	crc64:75082BDB0C42AE37	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P38996	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421063|imex:IM-26211-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N	-	crc64:88F0FF95B3A8BD89	crc64:CD6D2C7F24A44993	figure legend:Fig. 5A Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/10/09	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:iVBA824UReQJmvua7xganVlrm9U559292	rigid:nhqe3gnEvW/aRk4L0bOjAVbA0sw	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:1890-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P38996	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421161|imex:IM-26211-13	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N	-	crc64:88F0FF95B3A8BD89	crc64:CD6D2C7F24A44993	figure legend:Fig. 5, Supp Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/09/29	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:iVBA824UReQJmvua7xganVlrm9U559292	rigid:DdVEzTUU1oOVUiNuMLV7fj4PXfI	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:976-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P53617	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421161|imex:IM-26211-13	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N	-	crc64:88F0FF95B3A8BD89	crc64:75082BDB0C42AE37	figure legend:Fig. 5, Supp Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/09/29	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292	rigid:DdVEzTUU1oOVUiNuMLV7fj4PXfI	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:976-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q00416	uniprotkb:P32598	intact:EBI-16945|uniprotkb:Q06448|uniprotkb:D6VZ65|ensemblfungi:YLR430W|uniprotkb:E9P9Z4	intact:EBI-13715|ensemblfungi:YER133W|uniprotkb:D3DM39	psi-mi:sen1_yeast(display_long)|uniprotkb:SEN1(gene name)|psi-mi:SEN1(display_short)|uniprotkb:YLR430W(locus name)|uniprotkb:L9576.1(orf name)|uniprotkb:tRNA-splicing endonuclease positive effector(gene name synonym)	psi-mi:pp12_yeast(display_long)|uniprotkb:GLC7(gene name)|psi-mi:GLC7(display_short)|uniprotkb:CID1(gene name synonym)|uniprotkb:DIS2(gene name synonym)|uniprotkb:YER133W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Nedea et al. (2008)	pubmed:18342605|imex:IM-26211	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-16421161|imex:IM-26211-13	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013534.3|ensemblfungi:YLR430W_mRNA(transcript)|go:"GO:0001147"(transcription termination site sequence-specific DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006364"(rRNA processing)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008033"(tRNA processing)|go:"GO:0016180"(snRNA processing)|go:"GO:0016604"(nuclear body)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0033678"(5'-3' DNA/RNA helicase activity)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045005"(DNA-dependent DNA replication maintenance of fidelity)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0060257"(negative regulation of flocculation)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|interpro:IPR024481|interpro:IPR026121|interpro:IPR027417|go:"GO:0032574"(5'-3' RNA helicase activity)|interpro:IPR041677|interpro:IPR041679|interpro:IPR044340|rcsb pdb:5MZN|rcsb pdb:6GC3|rcsb pdb:6I59|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|sgd:S000004422|ensemblfungi:YLR430W(gene)|dip:DIP-881N|mint:Q00416	ensemblfungi:YER133W(gene)|ensemblfungi:YER133W_mRNA(transcript)|go:"GO:0000076"(DNA replication checkpoint signaling)|go:"GO:0000077"(DNA damage checkpoint signaling)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000776"(kinetochore)|go:"GO:0001400"(mating projection base)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005847"(mRNA cleavage and polyadenylation specificity factor complex)|go:"GO:0005935"(cellular bud neck)|go:"GO:0005977"(glycogen metabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006873"(cellular ion homeostasis)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0007059"(chromosome segregation)|go:"GO:0007094"(mitotic spindle assembly checkpoint signaling)|go:"GO:0007116"(regulation of cell budding)|go:"GO:0007346"(regulation of mitotic cell cycle)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0009408"(response to heat)|go:"GO:0005816"(spindle pole body)|go:"GO:0016576"(histone dephosphorylation)|go:"GO:0030437"(ascospore formation)|go:"GO:0031297"(replication fork processing)|go:"GO:0032153"(cell division site)|go:"GO:0034501"(protein localization to kinetochore)|go:"GO:0035307"(positive regulation of protein dephosphorylation)|go:"GO:0046872"(metal ion binding)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070873"(regulation of glycogen metabolic process)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:1901901"(regulation of protein localization to cell division site involved in cytokinesis)|go:"GO:1903501"(positive regulation of mitotic actomyosin contractile ring assembly)|go:"GO:2000370"(positive regulation of clathrin-dependent endocytosis)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|interpro:IPR031675|interpro:IPR037981|go:"GO:0070940"(dephosphorylation of RNA polymerase II C-terminal domain)|sgd:S000000935|refseq:NP_011059.3|mint:P32598|dip:DIP-1336N	-	crc64:88F0FF95B3A8BD89	crc64:71B20E3A4ED93235	figure legend:Fig. 5, Supp Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2017/09/28	2017/09/29	rogid:37O2NpNKa7l87R1ELXdUZCS4Waw559292	rogid:wXXOB38if1fxEN0yLxeYTCXsuyU559292	rigid:DdVEzTUU1oOVUiNuMLV7fj4PXfI	false	calmodulin binding peptide plus protein a tag:c-c|sufficient binding region:976-2231	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)