#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q9W6J4 uniprotkb:Q9I917 intact:EBI-15655216 intact:EBI-15655199 psi-mi:q9w6j4_danre(display_long)|uniprotkb:clocka(gene name)|psi-mi:clocka(display_short)|uniprotkb:clock(gene name synonym) psi-mi:q9i917_danre(display_long)|uniprotkb:cry1a(gene name)|psi-mi:cry1a(display_short)|uniprotkb:cry1aa(gene name synonym)|uniprotkb:zcry1a(gene name synonym) psi-mi:"MI:0018"(two hybrid) Tamai et al. (2007) pubmed:17785416|doi:10.1073/pnas.0704588104|imex:IM-9698 taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-15655243|imex:IM-9698-1|dip:DIP-88517E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0009416"(response to light stimulus)|go:"GO:0009648"(photoperiodism)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0032991"(protein-containing complex)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0060215"(primitive hemopoiesis)|go:"GO:0070888"(E-box binding)|go:"GO:1990513"(CLOCK-BMAL transcription complex)|interpro:IPR000014(PAS)|interpro:IPR001067(Nuclear translocator)|interpro:IPR001610(PAC motif)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR013767(PAS fold)|interpro:IPR035965|interpro:IPR036638|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007498"(mesoderm development)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009266"(response to temperature stimulus)|dip:DIP-46451N go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0018298"(protein-chromophore linkage)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0043153"(entrainment of circadian clock by photoperiod)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0071949"(FAD binding)|interpro:IPR005101(DNA photolyase, FAD-binding/Cryptochrome, C-terminal)|interpro:IPR006050(DNA photolyase, N-terminal)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR036134|interpro:IPR036155|dip:DIP-46450N psi-mi:"MI:0465"(dip) - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/08/05 2017/08/10 rogid:a8sTqrGt7BNxDs62e9KU70sB0KY7955 rogid:I+1FizJiiKH9xG1vJsc8z0toD3Q7955 rigid:X4lrnD11ndrfcEX9s80OoiZB5MM false sufficient binding region:236-390 - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9I879 uniprotkb:Q9W6J4 intact:EBI-15655262|ensembl:ENSDARP00000004223|ensembl:ENSDARP00000124722|ensembl:ENSDARP00000152872 intact:EBI-15655216 psi-mi:q9i879_danre(display_long)|uniprotkb:arntl1a(gene name)|psi-mi:arntl1a(display_short)|uniprotkb:bmal1(gene name synonym) psi-mi:q9w6j4_danre(display_long)|uniprotkb:clocka(gene name)|psi-mi:clocka(display_short)|uniprotkb:clock(gene name synonym) psi-mi:"MI:0018"(two hybrid) Tamai et al. (2007) pubmed:17785416|doi:10.1073/pnas.0704588104|imex:IM-9698 taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-15655295|imex:IM-9698-2|dip:DIP-88518E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSDARG00000006791(gene)|ensembl:ENSDART00000023959(transcript)|ensembl:ENSDART00000148660(transcript)|ensembl:ENSDART00000191586(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009648"(photoperiodism)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034751"(aryl hydrocarbon receptor complex)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046983"(protein dimerization activity)|go:"GO:1901342"(regulation of vasculature development)|interpro:IPR000014(PAS)|interpro:IPR001067(Nuclear translocator)|interpro:IPR001610(PAC motif)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR013767(PAS fold)|interpro:IPR035965|interpro:IPR036638|refseq:NP_571652.1|refseq:XP_005163079.1|refseq:XP_009296196.1|dip:DIP-46453N go:"GO:0009416"(response to light stimulus)|go:"GO:0009648"(photoperiodism)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0032991"(protein-containing complex)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0060215"(primitive hemopoiesis)|go:"GO:0070888"(E-box binding)|go:"GO:1990513"(CLOCK-BMAL transcription complex)|interpro:IPR000014(PAS)|interpro:IPR001067(Nuclear translocator)|interpro:IPR001610(PAC motif)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR013767(PAS fold)|interpro:IPR035965|interpro:IPR036638|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007498"(mesoderm development)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009266"(response to temperature stimulus)|dip:DIP-46451N psi-mi:"MI:0465"(dip) - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/08/05 2017/08/10 rogid:BGAP2yHFwyW0TJknaR+9WrZr6zw7955 rogid:a8sTqrGt7BNxDs62e9KU70sB0KY7955 rigid:ADIA6USeipRsl3QXdl4wMNePIv0 false - sufficient binding region:236-390|sufficient binding region:1-104 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q8JIG1 uniprotkb:Q9I917 intact:EBI-15655316|ensembl:ENSDARP00000114569 intact:EBI-15655199 psi-mi:q8jig1_danre(display_long)|uniprotkb:arntl1b(gene name)|psi-mi:arntl1b(display_short)|uniprotkb:zfBMAL3(gene name synonym) psi-mi:q9i917_danre(display_long)|uniprotkb:cry1a(gene name)|psi-mi:cry1a(display_short)|uniprotkb:cry1aa(gene name synonym)|uniprotkb:zcry1a(gene name synonym) psi-mi:"MI:0018"(two hybrid) Tamai et al. (2007) pubmed:17785416|doi:10.1073/pnas.0704588104|imex:IM-9698 taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-15655344|imex:IM-9698-3|dip:DIP-88520E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSDARG00000035732(gene)|ensembl:ENSDART00000139227(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009648"(photoperiodism)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0034751"(aryl hydrocarbon receptor complex)|go:"GO:0046983"(protein dimerization activity)|interpro:IPR000014(PAS)|interpro:IPR001067(Nuclear translocator)|interpro:IPR001610(PAC motif)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR013767(PAS fold)|interpro:IPR035965|interpro:IPR036638|refseq:NP_840085.1|dip:DIP-46454N go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0018298"(protein-chromophore linkage)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0043153"(entrainment of circadian clock by photoperiod)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0071949"(FAD binding)|interpro:IPR005101(DNA photolyase, FAD-binding/Cryptochrome, C-terminal)|interpro:IPR006050(DNA photolyase, N-terminal)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR036134|interpro:IPR036155|dip:DIP-46450N psi-mi:"MI:0465"(dip) - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/08/05 2017/08/10 rogid:TjQonj/wah1nGqa892Vz6JoNzd07955 rogid:I+1FizJiiKH9xG1vJsc8z0toD3Q7955 rigid:/FwAPal2+0vy0yjvjYhvxoaEWeI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9I917 uniprotkb:Q9I879 intact:EBI-15655199 intact:EBI-15655262|ensembl:ENSDARP00000004223|ensembl:ENSDARP00000124722|ensembl:ENSDARP00000152872 psi-mi:q9i917_danre(display_long)|uniprotkb:cry1a(gene name)|psi-mi:cry1a(display_short)|uniprotkb:cry1aa(gene name synonym)|uniprotkb:zcry1a(gene name synonym) psi-mi:q9i879_danre(display_long)|uniprotkb:arntl1a(gene name)|psi-mi:arntl1a(display_short)|uniprotkb:bmal1(gene name synonym) psi-mi:"MI:0018"(two hybrid) Tamai et al. (2007) pubmed:17785416|doi:10.1073/pnas.0704588104|imex:IM-9698 taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-15655361|imex:IM-9698-4|dip:DIP-88521E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0018298"(protein-chromophore linkage)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0043153"(entrainment of circadian clock by photoperiod)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0071949"(FAD binding)|interpro:IPR005101(DNA photolyase, FAD-binding/Cryptochrome, C-terminal)|interpro:IPR006050(DNA photolyase, N-terminal)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR036134|interpro:IPR036155|dip:DIP-46450N ensembl:ENSDARG00000006791(gene)|ensembl:ENSDART00000023959(transcript)|ensembl:ENSDART00000148660(transcript)|ensembl:ENSDART00000191586(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009648"(photoperiodism)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034751"(aryl hydrocarbon receptor complex)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046983"(protein dimerization activity)|go:"GO:1901342"(regulation of vasculature development)|interpro:IPR000014(PAS)|interpro:IPR001067(Nuclear translocator)|interpro:IPR001610(PAC motif)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR013767(PAS fold)|interpro:IPR035965|interpro:IPR036638|refseq:NP_571652.1|refseq:XP_005163079.1|refseq:XP_009296196.1|dip:DIP-46453N psi-mi:"MI:0465"(dip) - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/08/05 2017/08/10 rogid:I+1FizJiiKH9xG1vJsc8z0toD3Q7955 rogid:BGAP2yHFwyW0TJknaR+9WrZr6zw7955 rigid:Z7ZEb2tSotlCgHf5cqp3EgKcJL4 false - sufficient binding region:1-153|sufficient binding region:445-626 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9W6J4 uniprotkb:Q9I917 intact:EBI-15655216 intact:EBI-15655199 psi-mi:q9w6j4_danre(display_long)|uniprotkb:clocka(gene name)|psi-mi:clocka(display_short)|uniprotkb:clock(gene name synonym) psi-mi:q9i917_danre(display_long)|uniprotkb:cry1a(gene name)|psi-mi:cry1a(display_short)|uniprotkb:cry1aa(gene name synonym)|uniprotkb:zcry1a(gene name synonym) psi-mi:"MI:0018"(two hybrid) Tamai et al. (2007) pubmed:17785416|doi:10.1073/pnas.0704588104|imex:IM-9698 taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-15655382|imex:IM-9698-5|dip:DIP-88517E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0009416"(response to light stimulus)|go:"GO:0009648"(photoperiodism)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0032991"(protein-containing complex)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0060215"(primitive hemopoiesis)|go:"GO:0070888"(E-box binding)|go:"GO:1990513"(CLOCK-BMAL transcription complex)|interpro:IPR000014(PAS)|interpro:IPR001067(Nuclear translocator)|interpro:IPR001610(PAC motif)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR013767(PAS fold)|interpro:IPR035965|interpro:IPR036638|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007498"(mesoderm development)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009266"(response to temperature stimulus)|dip:DIP-46451N go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0018298"(protein-chromophore linkage)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0043153"(entrainment of circadian clock by photoperiod)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0071949"(FAD binding)|interpro:IPR005101(DNA photolyase, FAD-binding/Cryptochrome, C-terminal)|interpro:IPR006050(DNA photolyase, N-terminal)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR036134|interpro:IPR036155|dip:DIP-46450N psi-mi:"MI:0465"(dip) - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/08/05 2017/08/10 rogid:a8sTqrGt7BNxDs62e9KU70sB0KY7955 rogid:I+1FizJiiKH9xG1vJsc8z0toD3Q7955 rigid:X4lrnD11ndrfcEX9s80OoiZB5MM false sufficient binding region:236-390 - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9I879 uniprotkb:Q9W6J4 intact:EBI-15655262|ensembl:ENSDARP00000004223|ensembl:ENSDARP00000124722|ensembl:ENSDARP00000152872 intact:EBI-15655216 psi-mi:q9i879_danre(display_long)|uniprotkb:arntl1a(gene name)|psi-mi:arntl1a(display_short)|uniprotkb:bmal1(gene name synonym) psi-mi:q9w6j4_danre(display_long)|uniprotkb:clocka(gene name)|psi-mi:clocka(display_short)|uniprotkb:clock(gene name synonym) psi-mi:"MI:0018"(two hybrid) Tamai et al. (2007) pubmed:17785416|doi:10.1073/pnas.0704588104|imex:IM-9698 taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-15655401|imex:IM-9698-6|dip:DIP-88518E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSDARG00000006791(gene)|ensembl:ENSDART00000023959(transcript)|ensembl:ENSDART00000148660(transcript)|ensembl:ENSDART00000191586(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009648"(photoperiodism)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034751"(aryl hydrocarbon receptor complex)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046983"(protein dimerization activity)|go:"GO:1901342"(regulation of vasculature development)|interpro:IPR000014(PAS)|interpro:IPR001067(Nuclear translocator)|interpro:IPR001610(PAC motif)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR013767(PAS fold)|interpro:IPR035965|interpro:IPR036638|refseq:NP_571652.1|refseq:XP_005163079.1|refseq:XP_009296196.1|dip:DIP-46453N go:"GO:0009416"(response to light stimulus)|go:"GO:0009648"(photoperiodism)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0032991"(protein-containing complex)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0060215"(primitive hemopoiesis)|go:"GO:0070888"(E-box binding)|go:"GO:1990513"(CLOCK-BMAL transcription complex)|interpro:IPR000014(PAS)|interpro:IPR001067(Nuclear translocator)|interpro:IPR001610(PAC motif)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR013767(PAS fold)|interpro:IPR035965|interpro:IPR036638|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007498"(mesoderm development)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009266"(response to temperature stimulus)|dip:DIP-46451N psi-mi:"MI:0465"(dip) - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/08/05 2017/08/10 rogid:BGAP2yHFwyW0TJknaR+9WrZr6zw7955 rogid:a8sTqrGt7BNxDs62e9KU70sB0KY7955 rigid:ADIA6USeipRsl3QXdl4wMNePIv0 false sufficient binding region:1-153|sufficient binding region:226-444 binding-associated region:1-390 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q8JIG2 uniprotkb:Q9I917 intact:EBI-15655424 intact:EBI-15655199 psi-mi:q8jig2_danre(display_long)|uniprotkb:clockb(gene name)|psi-mi:clockb(display_short)|uniprotkb:clock3(gene name synonym)|uniprotkb:zfClock3(gene name synonym) psi-mi:q9i917_danre(display_long)|uniprotkb:cry1a(gene name)|psi-mi:cry1a(display_short)|uniprotkb:cry1aa(gene name synonym)|uniprotkb:zcry1a(gene name synonym) psi-mi:"MI:0018"(two hybrid) Tamai et al. (2007) pubmed:17785416|doi:10.1073/pnas.0704588104|imex:IM-9698 taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-15655445|imex:IM-9698-7|dip:DIP-88519E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009648"(photoperiodism)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0070888"(E-box binding)|go:"GO:1990513"(CLOCK-BMAL transcription complex)|interpro:IPR000014(PAS)|interpro:IPR001067(Nuclear translocator)|interpro:IPR001610(PAC motif)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR035965|interpro:IPR036638|dip:DIP-46452N go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0018298"(protein-chromophore linkage)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0043153"(entrainment of circadian clock by photoperiod)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0071949"(FAD binding)|interpro:IPR005101(DNA photolyase, FAD-binding/Cryptochrome, C-terminal)|interpro:IPR006050(DNA photolyase, N-terminal)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR036134|interpro:IPR036155|dip:DIP-46450N psi-mi:"MI:0465"(dip) - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/08/05 2017/08/10 rogid:gW4uQvxWj0BPb7PH9LncKNHDdfI7955 rogid:I+1FizJiiKH9xG1vJsc8z0toD3Q7955 rigid:HCf9qBQK6RtPJDsTqDbGNg0Z2F8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9I879 uniprotkb:Q9W6J4 intact:EBI-15655262|ensembl:ENSDARP00000004223|ensembl:ENSDARP00000124722|ensembl:ENSDARP00000152872 intact:EBI-15655216 psi-mi:q9i879_danre(display_long)|uniprotkb:arntl1a(gene name)|psi-mi:arntl1a(display_short)|uniprotkb:bmal1(gene name synonym) psi-mi:q9w6j4_danre(display_long)|uniprotkb:clocka(gene name)|psi-mi:clocka(display_short)|uniprotkb:clock(gene name synonym) psi-mi:"MI:0018"(two hybrid) Tamai et al. (2007) pubmed:17785416|doi:10.1073/pnas.0704588104|imex:IM-9698 taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") taxid:7955(danre)|taxid:7955("Danio rerio (Zebrafish)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-15655462|imex:IM-9698-8|dip:DIP-88518E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSDARG00000006791(gene)|ensembl:ENSDART00000023959(transcript)|ensembl:ENSDART00000148660(transcript)|ensembl:ENSDART00000191586(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009648"(photoperiodism)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034751"(aryl hydrocarbon receptor complex)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046983"(protein dimerization activity)|go:"GO:1901342"(regulation of vasculature development)|interpro:IPR000014(PAS)|interpro:IPR001067(Nuclear translocator)|interpro:IPR001610(PAC motif)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR013767(PAS fold)|interpro:IPR035965|interpro:IPR036638|refseq:NP_571652.1|refseq:XP_005163079.1|refseq:XP_009296196.1|dip:DIP-46453N go:"GO:0009416"(response to light stimulus)|go:"GO:0009648"(photoperiodism)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0032991"(protein-containing complex)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0060215"(primitive hemopoiesis)|go:"GO:0070888"(E-box binding)|go:"GO:1990513"(CLOCK-BMAL transcription complex)|interpro:IPR000014(PAS)|interpro:IPR001067(Nuclear translocator)|interpro:IPR001610(PAC motif)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR013767(PAS fold)|interpro:IPR035965|interpro:IPR036638|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007498"(mesoderm development)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009266"(response to temperature stimulus)|dip:DIP-46451N psi-mi:"MI:0465"(dip) - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2017/08/05 2017/08/10 rogid:BGAP2yHFwyW0TJknaR+9WrZr6zw7955 rogid:a8sTqrGt7BNxDs62e9KU70sB0KY7955 rigid:ADIA6USeipRsl3QXdl4wMNePIv0 false - sufficient binding region:236-390|sufficient binding region:1-104 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)