#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q99P58 uniprotkb:Q9ERI2 intact:EBI-11565917|uniprotkb:Q8CIX0|ensembl:ENSMUSP00000068349|ensembl:ENSMUSP00000112807|ensembl:ENSMUSP00000114094 intact:EBI-398172|ensembl:ENSMUSP00000034722|ensembl:ENSMUSP00000139310 psi-mi:rb27b_mouse(display_long)|uniprotkb:Rab27b(gene name)|psi-mi:Rab27b(display_short) psi-mi:rb27a_mouse(display_long)|uniprotkb:Rab27a(gene name)|psi-mi:Rab27a(display_short) psi-mi:"MI:2213"(Super-resolution microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11565961|imex:IM-24977-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001076022.1|refseq:NP_001289727.1|refseq:NP_085031.3|ensembl:ENSMUSG00000024511(gene)|ensembl:ENSMUST00000069749(transcript)|ensembl:ENSMUST00000117692(transcript)|ensembl:ENSMUST00000121693(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030141"(secretory granule)|go:"GO:0030667"(secretory granule membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0071985"(multivesicular body sorting pathway)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0099641"(anterograde axonal protein transport)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041837|rcsb pdb:2IEY|rcsb pdb:2IEZ|rcsb pdb:2IF0|rcsb pdb:2ZET|reactome:R-MMU-114608|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-46237N refseq:NP_076124.1|ensembl:ENSMUSG00000032202(gene)|ensembl:ENSMUST00000034722(transcript)|ensembl:ENSMUST00000184146(transcript)|go:"GO:0001750"(photoreceptor outer segment)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006605"(protein targeting)|go:"GO:0006887"(exocytosis)|go:"GO:0007596"(blood coagulation)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030141"(secretory granule)|go:"GO:0030318"(melanocyte differentiation)|go:"GO:0030425"(dendrite)|go:"GO:0030667"(secretory granule membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0032400"(melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0033093"(Weibel-Palade body)|go:"GO:0036257"(multivesicular body organization)|go:"GO:0042470"(melanosome)|go:"GO:0043316"(cytotoxic T cell degranulation)|go:"GO:0043320"(natural killer cell degranulation)|go:"GO:0043473"(pigmentation)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0050766"(positive regulation of phagocytosis)|go:"GO:0051875"(pigment granule localization)|go:"GO:0051904"(pigment granule transport)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071985"(multivesicular body sorting pathway)|go:"GO:0097278"(complement-dependent cytotoxicity)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1903428"(positive regulation of reactive oxygen species biosynthetic process)|go:"GO:1903435"(positive regulation of constitutive secretory pathway)|go:"GO:1990182"(exosomal secretion)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041837|rcsb pdb:3BC1|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_001288159.1|refseq:NP_001288161.1|refseq:XP_006510843.1|dip:DIP-31054N - - - figure legend:2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:R+P/aw+uO3tZcL5SFU6K0WwbOY410090 rogid:IAq2IfXZTw2jSr+7LqNaJ03f/+g10090 rigid:dTINWfi4+QKS1vOAFwE/sm6fCpY false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q91ZR1 uniprotkb:P63011 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:"MI:2213"(Super-resolution microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11566009|imex:IM-24977-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656 refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590 - - - figure legend:2C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rigid:KnJFq2c3saKeqwEF0AnvmlPANTY false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9CZE3 uniprotkb:O35129 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-445002|uniprotkb:O89075|uniprotkb:Q61336|ensembl:ENSMUSP00000004375 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:phb2_mouse(display_long)|uniprotkb:B-cell receptor-associated protein BAP37(gene name synonym)|uniprotkb:Repressor of estrogen receptor activity(gene name synonym)|uniprotkb:Phb2(gene name)|psi-mi:Phb2(display_short)|uniprotkb:Bap(gene name synonym)|uniprotkb:Bcap37(gene name synonym)|uniprotkb:Rea(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566082|imex:IM-24977-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198 refseq:NP_031557.2|go:"GO:0046625"(sphingolipid binding)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0050821"(protein stabilization)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0060744"(mammary gland branching involved in thelarche)|go:"GO:0060749"(mammary gland alveolus development)|go:"GO:0060762"(regulation of branching involved in mammary gland duct morphogenesis)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0071300"(cellular response to retinoic acid)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071944"(cell periphery)|go:"GO:0098800"(inner mitochondrial membrane protein complex)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0140374"(antiviral innate immune response)|go:"GO:1900208"(regulation of cardiolipin metabolic process)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1904959"(regulation of cytochrome-c oxidase activity)|go:"GO:1990051"(activation of protein kinase C activity)|interpro:IPR000163(Prohibitin)|interpro:IPR001107(Band 7 protein)|interpro:IPR036013|mint:O35129|reactome:R-MMU-8949664|go:"GO:1902808"(positive regulation of cell cycle G1/S phase transition)|ensembl:ENSMUSG00000004264(gene)|ensembl:ENSMUST00000004375(transcript)|go:"GO:0000423"(mitophagy)|go:"GO:0002639"(positive regulation of immunoglobulin production)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0007202"(activation of phospholipase C activity)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009611"(response to wounding)|go:"GO:0009986"(cell surface)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016363"(nuclear matrix)|go:"GO:0023035"(CD40 signaling pathway)|go:"GO:0030424"(axon)|go:"GO:0031536"(positive regulation of exit from mitosis)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0033218"(amide binding)|go:"GO:0033600"(negative regulation of mammary gland epithelial cell proliferation)|go:"GO:0035632"(mitochondrial prohibitin complex)|go:"GO:0039520"(induction by virus of host autophagy)|go:"GO:0039529"(RIG-I signaling pathway)|go:"GO:0042113"(B cell activation)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0016477"(cell migration) - - - figure legend:7C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:h4pib54mBeQgOKCe/hib58LM26w10090 rigid:+U5ugQo9BhZWSIESYMtHabbXAUs false tandem tag:n-n - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9CZE3 uniprotkb:P67778 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-298507|uniprotkb:P24142|uniprotkb:Q3UB75|uniprotkb:Q5SQG4|ensembl:ENSMUSP00000119603 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:phb_mouse(display_long)|uniprotkb:Phb(gene name)|psi-mi:Phb(display_short)|uniprotkb:B-cell receptor-associated protein 32(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566082|imex:IM-24977-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198 ensembl:ENSMUSG00000038845(gene)|ensembl:ENSMUST00000125172(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001541"(ovarian follicle development)|go:"GO:0001552"(ovarian follicle atresia)|go:"GO:0001850"(complement component C3a binding)|go:"GO:0001851"(complement component C3b binding)|go:"GO:0002639"(positive regulation of immunoglobulin production)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007202"(activation of phospholipase C activity)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009986"(cell surface)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0010944"(negative regulation of transcription by competitive promoter binding)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016575"(histone deacetylation)|go:"GO:0019899"(enzyme binding)|go:"GO:0023035"(CD40 signaling pathway)|go:"GO:0030061"(mitochondrial crista)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0031100"(animal organ regeneration)|go:"GO:0031315"(extrinsic component of mitochondrial outer membrane)|go:"GO:0031871"(proteinase activated receptor binding)|go:"GO:0032740"(positive regulation of interleukin-17 production)|go:"GO:0035632"(mitochondrial prohibitin complex)|go:"GO:0035902"(response to immobilization stress)|go:"GO:0042113"(B cell activation)|go:"GO:0042177"(negative regulation of protein catabolic process)|go:"GO:0042493"|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0039529"(RIG-I signaling pathway)|go:"GO:0044830"(modulation by host of viral RNA genome replication)|go:"GO:0045471"(response to ethanol)|go:"GO:0045745"(positive regulation of G protein-coupled receptor signaling pathway)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045917"(positive regulation of complement activation)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0050821"(protein stabilization)|go:"GO:0050847"(progesterone receptor signaling pathway)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0060766"(negative regulation of androgen receptor signaling pathway)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0071354"(cellular response to interleukin-6)|go:"GO:0071897"(DNA biosynthetic process)|go:"GO:0072538"(T-helper 17 type immune response)|go:"GO:0098891"(extrinsic component of presynaptic active zone membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0140374"(antiviral innate immune response)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1990051"(activation of protein kinase C activity)|go:"GO:2000323"(negative regulation of glucocorticoid receptor signaling pathway)|interpro:IPR000163(Prohibitin)|interpro:IPR001107(Band 7 protein)|interpro:IPR036013|mint:P67778|reactome:R-MMU-5673000|reactome:R-MMU-8949664|refseq:NP_032857.1 - - - figure legend:7C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:eUStcZ9Mu7+7MHr/GJXFwwJY/Fc10090 rigid:+U5ugQo9BhZWSIESYMtHabbXAUs false tandem tag:n-n - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9CZE3 uniprotkb:P67778 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-298507|uniprotkb:P24142|uniprotkb:Q3UB75|uniprotkb:Q5SQG4|ensembl:ENSMUSP00000119603 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:phb_mouse(display_long)|uniprotkb:Phb(gene name)|psi-mi:Phb(display_short)|uniprotkb:B-cell receptor-associated protein 32(gene name synonym) psi-mi:"MI:0813"(proximity ligation assay) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:2364"(proximity) psi-mi:"MI:0469"(IntAct) intact:EBI-11566095|imex:IM-24977-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198 ensembl:ENSMUSG00000038845(gene)|ensembl:ENSMUST00000125172(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001541"(ovarian follicle development)|go:"GO:0001552"(ovarian follicle atresia)|go:"GO:0001850"(complement component C3a binding)|go:"GO:0001851"(complement component C3b binding)|go:"GO:0002639"(positive regulation of immunoglobulin production)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007202"(activation of phospholipase C activity)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009986"(cell surface)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0010944"(negative regulation of transcription by competitive promoter binding)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016575"(histone deacetylation)|go:"GO:0019899"(enzyme binding)|go:"GO:0023035"(CD40 signaling pathway)|go:"GO:0030061"(mitochondrial crista)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0031100"(animal organ regeneration)|go:"GO:0031315"(extrinsic component of mitochondrial outer membrane)|go:"GO:0031871"(proteinase activated receptor binding)|go:"GO:0032740"(positive regulation of interleukin-17 production)|go:"GO:0035632"(mitochondrial prohibitin complex)|go:"GO:0035902"(response to immobilization stress)|go:"GO:0042113"(B cell activation)|go:"GO:0042177"(negative regulation of protein catabolic process)|go:"GO:0042493"|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0039529"(RIG-I signaling pathway)|go:"GO:0044830"(modulation by host of viral RNA genome replication)|go:"GO:0045471"(response to ethanol)|go:"GO:0045745"(positive regulation of G protein-coupled receptor signaling pathway)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045917"(positive regulation of complement activation)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0050821"(protein stabilization)|go:"GO:0050847"(progesterone receptor signaling pathway)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0060766"(negative regulation of androgen receptor signaling pathway)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0071354"(cellular response to interleukin-6)|go:"GO:0071897"(DNA biosynthetic process)|go:"GO:0072538"(T-helper 17 type immune response)|go:"GO:0098891"(extrinsic component of presynaptic active zone membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0140374"(antiviral innate immune response)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1990051"(activation of protein kinase C activity)|go:"GO:2000323"(negative regulation of glucocorticoid receptor signaling pathway)|interpro:IPR000163(Prohibitin)|interpro:IPR001107(Band 7 protein)|interpro:IPR036013|mint:P67778|reactome:R-MMU-5673000|reactome:R-MMU-8949664|refseq:NP_032857.1 - - - figure legend:7D, 7E, 7F|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:eUStcZ9Mu7+7MHr/GJXFwwJY/Fc10090 rigid:Zj5MFt6/20RGhGcbMj1rCyDMjEk false - - - - psi-mi:"MI:0421"(identification by antibody) psi-mi:"MI:0421"(identification by antibody) uniprotkb:O35129 uniprotkb:Q9CZE3 intact:EBI-445002|uniprotkb:O89075|uniprotkb:Q61336|ensembl:ENSMUSP00000004375 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 psi-mi:phb2_mouse(display_long)|uniprotkb:B-cell receptor-associated protein BAP37(gene name synonym)|uniprotkb:Repressor of estrogen receptor activity(gene name synonym)|uniprotkb:Phb2(gene name)|psi-mi:Phb2(display_short)|uniprotkb:Bap(gene name synonym)|uniprotkb:Bcap37(gene name synonym)|uniprotkb:Rea(gene name synonym) psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:"MI:0813"(proximity ligation assay) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:2364"(proximity) psi-mi:"MI:0469"(IntAct) intact:EBI-11566100|imex:IM-24977-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_031557.2|go:"GO:0046625"(sphingolipid binding)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0050821"(protein stabilization)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0060744"(mammary gland branching involved in thelarche)|go:"GO:0060749"(mammary gland alveolus development)|go:"GO:0060762"(regulation of branching involved in mammary gland duct morphogenesis)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0071300"(cellular response to retinoic acid)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071944"(cell periphery)|go:"GO:0098800"(inner mitochondrial membrane protein complex)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0140374"(antiviral innate immune response)|go:"GO:1900208"(regulation of cardiolipin metabolic process)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1904959"(regulation of cytochrome-c oxidase activity)|go:"GO:1990051"(activation of protein kinase C activity)|interpro:IPR000163(Prohibitin)|interpro:IPR001107(Band 7 protein)|interpro:IPR036013|mint:O35129|reactome:R-MMU-8949664|go:"GO:1902808"(positive regulation of cell cycle G1/S phase transition)|ensembl:ENSMUSG00000004264(gene)|ensembl:ENSMUST00000004375(transcript)|go:"GO:0000423"(mitophagy)|go:"GO:0002639"(positive regulation of immunoglobulin production)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0007202"(activation of phospholipase C activity)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009611"(response to wounding)|go:"GO:0009986"(cell surface)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016363"(nuclear matrix)|go:"GO:0023035"(CD40 signaling pathway)|go:"GO:0030424"(axon)|go:"GO:0031536"(positive regulation of exit from mitosis)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0033218"(amide binding)|go:"GO:0033600"(negative regulation of mammary gland epithelial cell proliferation)|go:"GO:0035632"(mitochondrial prohibitin complex)|go:"GO:0039520"(induction by virus of host autophagy)|go:"GO:0039529"(RIG-I signaling pathway)|go:"GO:0042113"(B cell activation)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0016477"(cell migration) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198 - - - figure legend:7D, 7E|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:h4pib54mBeQgOKCe/hib58LM26w10090 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rigid:e/vF2RdcyfhoWhm9vm/Id72BoSc false - - - - psi-mi:"MI:0421"(identification by antibody) psi-mi:"MI:0421"(identification by antibody) uniprotkb:O35963 uniprotkb:P11499 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-492813|uniprotkb:O89078|uniprotkb:Q3UIQ7|ensembl:ENSMUSP00000024739 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:hs90b_mouse(display_long)|uniprotkb:Heat shock 84 kDa(gene name synonym)|uniprotkb:Tumor-specific transplantation 84 kDa antigen(gene name synonym)|uniprotkb:Hsp90ab1(gene name)|psi-mi:Hsp90ab1(display_short)|uniprotkb:Hsp84(gene name synonym)|uniprotkb:Hsp84-1(gene name synonym)|uniprotkb:Hspcb(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_032328.2|go:"GO:0009651"(response to salt stress)|go:"GO:0009986"(cell surface)|go:"GO:0010033"(response to organic substance)|go:"GO:0016234"(inclusion body)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017098"(sulfonylurea receptor binding)|go:"GO:0019062"(virion attachment to host cell)|go:"GO:0019900"(kinase binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0021955"(central nervous system neuron axonogenesis)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030235"(nitric-oxide synthase regulator activity)|go:"GO:0030511"(positive regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031526"(brush border membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032092"(positive regulation of protein binding)|go:"GO:0032435"(negative regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0032516"(positive regulation of phosphoprotein phosphatase activity)|go:"GO:0032564"(dATP binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:1901799"(negative regulation of proteasomal protein catabolic process)|go:"GO:1903660"(negative regulation of complement-dependent cytotoxicity)|go:"GO:1903827"|go:"GO:1904031"(positive regulation of cyclin-dependent protein kinase activity)|go:"GO:1905323"(telomerase holoenzyme complex assembly)|go:"GO:1990226"(histone methyltransferase binding)|go:"GO:1990565"(HSP90-CDC37 chaperone complex)|go:"GO:1990913"(sperm head plasma membrane)|go:"GO:1990917"(ooplasm)|go:"GO:2000010"(positive regulation of protein localization to cell surface)|interpro:IPR001404(Heat shock protein Hsp90)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR019805|interpro:IPR020568|interpro:IPR020575|interpro:IPR036890|interpro:IPR037196|mint:P11499|reactome:R-MMU-168928|reactome:R-MMU-2029482|reactome:R-MMU-3371497|reactome:R-MMU-3371511|reactome:R-MMU-3371568|reactome:R-MMU-3371571|reactome:R-MMU-399954|reactome:R-MMU-6798695|reactome:R-MMU-844456|reactome:R-MMU-8852276|reactome:R-MMU-8937144|reactome:R-MMU-8939211|reactome:R-MMU-9013418|reactome:R-MMU-9018519|ensembl:ENSMUSG00000023944(gene)|ensembl:ENSMUST00000024739(transcript)|go:"GO:0001890"(placenta development)|go:"GO:0002134"(UTP binding)|go:"GO:0002135"(CTP binding)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0007004"(telomere maintenance via telomerase)|go:"GO:0008180"(COP9 signalosome)|go:"GO:0034605"(cellular response to heat)|go:"GO:0034751"(aryl hydrocarbon receptor complex)|go:"GO:0042220"(response to cocaine)|go:"GO:0042277"(peptide binding)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0042470"(melanosome)|go:"GO:0042493"|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0043008"(ATP-dependent protein binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0044294"(dendritic growth cone)|go:"GO:0044295"(axonal growth cone)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045597"(positive regulation of cell differentiation)|go:"GO:0045793"(positive regulation of cell size)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0048156"(tau protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048675"(axon extension)|go:"GO:0050821"(protein stabilization)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051248"(negative regulation of protein metabolic process)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:0060334"(regulation of interferon-gamma-mediated signaling pathway)|go:"GO:0060338"(regulation of type I interferon-mediated signaling pathway)|go:"GO:0070182"(DNA polymerase binding)|go:"GO:0071353"(cellular response to interleukin-4)|go:"GO:0071407"(cellular response to organic cyclic compound)|go:"GO:0071902"(positive regulation of protein serine/threonine kinase activity)|go:"GO:0097435"(supramolecular fiber organization)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0120293"(dynein axonemal particle)|go:"GO:1901389"(negative regulation of transforming growth factor beta activation)|dip:DIP-461N|entrezgene/locuslink:15516(identity) - - author-confidence:1.0067491463159943 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:5/MXDESVXdwuWna0s87Ap19aLMA10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:Q9CZ44 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-7961368|uniprotkb:Q8BYL3|uniprotkb:Q80Y15|intact:MINT-1869876|uniprotkb:A2AT03|ensembl:ENSMUSP00000028949 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:nsf1c_mouse(display_long)|uniprotkb:Nsfl1c(gene name)|psi-mi:Nsfl1c(display_short)|uniprotkb:p97 cofactor p47(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_938085.1|refseq:NP_001278003.1|ensembl:ENSMUSG00000027455(gene)|ensembl:ENSMUST00000028949(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000132"(establishment of mitotic spindle orientation)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0005795"(Golgi stack)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0007030"(Golgi organization)|go:"GO:0031468"(nuclear membrane reassembly)|go:"GO:0031616"(spindle pole centrosome)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0045111"(intermediate filament cytoskeleton)|go:"GO:0046604"(positive regulation of mitotic centrosome separation)|go:"GO:0051117"(ATPase binding)|go:"GO:0061025"(membrane fusion)|go:"GO:1904780"(negative regulation of protein localization to centrosome)|go:"GO:1990730"(VCP-NSFL1C complex)|interpro:IPR001012(UBX)|interpro:IPR009060(UBA-like)|interpro:IPR012989(SEP)|interpro:IPR029071|interpro:IPR036241|mint:Q9CZ44|reactome:R-MMU-9013407|entrezgene/locuslink:386649(identity) - - comment:mint|comment:homomint|function:"Reduces the ATPase activity of VCP. Necessary for the fragmentation of Golgi stacks during mitosis and for VCP-mediated reassembly of Golgi stacks after mitosis. May play a role in VCP-mediated formation of transitional endoplasmic reticulum (tER)"|author-confidence:1.5734917951729592 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:b61FAzDFIfQboD05Rm+7tvW2DQY10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:Q8BH80 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-8328235|intact:MINT-4110487|ensembl:ENSMUSP00000064699 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:q8bh80_mouse(display_long)|uniprotkb:Vapb(gene name)|psi-mi:Vapb(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_062780.2|ensembl:ENSMUSG00000054455(gene)|ensembl:ENSMUST00000067530(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006874"(cellular calcium ion homeostasis)|go:"GO:0007029"(endoplasmic reticulum organization)|go:"GO:0008017"(microtubule binding)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019048"(modulation by virus of host process)|go:"GO:0019899"(enzyme binding)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0033149"(FFAT motif binding)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0045070"(positive regulation of viral genome replication)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048487"(beta-tubulin binding)|go:"GO:0090114"(COPII-coated vesicle budding)|interpro:IPR000535(Major sperm protein)|interpro:IPR008962(PapD-like)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR016763(Vesicle-associated membrane protein)|mint:Q8BH80|entrezgene/locuslink:56491(identity) - - comment:mint|author-confidence:6.196148292007233 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:VDToWFS6K6dSj6TqhtZOYsyJV+810090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:O35343 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-8372758|intact:MINT-4098648|ensembl:ENSMUSP00000141227 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:ima3_mouse(display_long)|uniprotkb:Kpna4(gene name)|psi-mi:Kpna4(display_short)|uniprotkb:Qip1(gene name synonym)|uniprotkb:Karyopherin subunit alpha-4(gene name synonym)|uniprotkb:Importin alpha Q1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_032493.1|dip:DIP-62053N|ensembl:ENSMUSG00000027782(gene)|ensembl:ENSMUST00000194558(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006607"(NLS-bearing protein import into nucleus)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0061608"(nuclear import signal receptor activity)|interpro:IPR000225(Armadillo)|interpro:IPR002652(Importin-alpha-like, importin-beta-binding region)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR024931|interpro:IPR032413|interpro:IPR036975|mint:O35343|entrezgene/locuslink:16649(identity) - - comment:mint|function:"Functions in nuclear protein import as an adapter protein for nuclear receptor KPNB1. Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin-beta and the three components separate and importin-alpha and -beta are re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran from importin. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus"|author-confidence:6.20792939903859 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:FNkP/rMLdR4xUoOYLuHsT710FeA10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:Q922I7 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-8383945|intact:MINT-4122800|ensembl:ENSMUSP00000126192 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:q922i7_mouse(display_long)|uniprotkb:Ptbp1(gene name)|psi-mi:Ptbp1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_032982.2|refseq:NP_001070831.1|ensembl:ENSMUSG00000006498(gene)|ensembl:ENSMUST00000172282(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034798|interpro:IPR035000|interpro:IPR035001|interpro:IPR035979|mint:Q922I7|entrezgene/locuslink:19205(identity) - - comment:mint|author-confidence:6.152058391450486 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:wAzhI2yWLiaLfxmENQor0rKTxXo10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:Q9WVG9 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-11566163|uniprotkb:B1AUJ7|uniprotkb:B1AUJ8|ensembl:ENSMUSP00000033725 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:ms3l1_mouse(display_long)|uniprotkb:Male-specific lethal-3 homolog 1(gene name synonym)|uniprotkb:Male-specific lethal-3 protein-like 1(gene name synonym)|uniprotkb:Msl31(gene name synonym)|uniprotkb:Msl3l1(gene name synonym)|uniprotkb:Msl3(gene name)|psi-mi:Msl3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_034962.2|refseq:XP_006528804.1|ensembl:ENSMUSG00000031358(gene)|ensembl:ENSMUST00000033725(transcript)|go:"GO:0000123"(histone acetyltransferase complex)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006342"|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0016573"(histone acetylation)|go:"GO:0016575"(histone deacetylation)|go:"GO:0035064"(methylated histone binding)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0043968"(histone H2A acetylation)|go:"GO:0043984"(histone H4-K16 acetylation)|go:"GO:0046972"("histone acetyltransferase activity (H4-K16 specific)")|go:"GO:0072487"(MSL complex)|interpro:IPR000953(Chromo domain)|interpro:IPR008676(MRG)|interpro:IPR016197(Chromo domain-like)|interpro:IPR025995|interpro:IPR026541|interpro:IPR037921|interpro:IPR038217|reactome:R-MMU-3214847|entrezgene/locuslink:17692(identity) - - author-confidence:11.59332332534241 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:CkX1/jNBkbEJ70WpDwpcTfL0xuA10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:P07901 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-78930|ensembl:ENSMUSP00000021698|ensembl:ENSMUSP00000091921 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:hs90a_mouse(display_long)|uniprotkb:Hsp90aa1(gene name)|psi-mi:Hsp90aa1(display_short)|uniprotkb:Hsp86(gene name synonym)|uniprotkb:Hsp86-1(gene name synonym)|uniprotkb:Hspca(gene name synonym)|uniprotkb:Heat shock 86 kDa(gene name synonym)|uniprotkb:Tumor-specific transplantation 86 kDa antigen(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_034610.1|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045585"(positive regulation of cytotoxic T cell differentiation)|go:"GO:0045793"(positive regulation of cell size)|go:"GO:0046677"(response to antibiotic)|go:"GO:0048156"(tau protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048675"(axon extension)|go:"GO:0050821"(protein stabilization)|go:"GO:0051020"(GTPase binding)|go:"GO:0051022"(Rho GDP-dissociation inhibitor binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070182"(DNA polymerase binding)|go:"GO:0097110"(scaffold protein binding)|go:"GO:0097226"(sperm mitochondrial sheath)|go:"GO:0097524"(sperm plasma membrane)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0098586"(cellular response to virus)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902949"(positive regulation of tau-protein kinase activity)|go:"GO:1903364"(positive regulation of cellular protein catabolic process)|go:"GO:1903827"|go:"GO:1905323"(telomerase holoenzyme complex assembly)|go:"GO:1990782"(protein tyrosine kinase binding)|interpro:IPR001404(Heat shock protein Hsp90)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR019805|interpro:IPR020568|interpro:IPR020575|interpro:IPR036890|interpro:IPR037196|mint:P07901|rcsb pdb:5H22|reactome:R-MMU-1227986|reactome:R-MMU-1474151|reactome:R-MMU-168928|reactome:R-MMU-2029482|reactome:R-MMU-203615|reactome:R-MMU-2565942|reactome:R-MMU-3371497|reactome:R-MMU-3371511|reactome:R-MMU-3371568|reactome:R-MMU-3371571|reactome:R-MMU-380259|reactome:R-MMU-380270|reactome:R-MMU-380284|reactome:R-MMU-380320|reactome:R-MMU-399954|reactome:R-MMU-4420097|reactome:R-MMU-5218920|reactome:R-MMU-5620912|reactome:R-MMU-5675482|reactome:R-MMU-6798695|reactome:R-MMU-8852276|reactome:R-MMU-8854518|reactome:R-MMU-8863795|reactome:R-MMU-8939211|reactome:R-MMU-9009391|reactome:R-MMU-9013418|reactome:R-MMU-9018519|reactome:R-MMU-9652282|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031526"(brush border membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032273"(positive regulation of protein polymerization)|go:"GO:0032564"(dATP binding)|go:"GO:0032728"(positive regulation of interferon-beta production)|ensembl:ENSMUSG00000021270(gene)|ensembl:ENSMUST00000021698(transcript)|ensembl:ENSMUST00000094361(transcript)|go:"GO:0001764"(neuron migration)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0002134"(UTP binding)|go:"GO:0002135"(CTP binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0002230"(positive regulation of defense response to virus by host)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006809"(nitric oxide biosynthetic process)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0007004"(telomere maintenance via telomerase)|go:"GO:0009408"(response to heat)|go:"GO:0009409"(response to cold)|go:"GO:0009986"(cell surface)|go:"GO:0010592"(positive regulation of lamellipodium assembly)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017098"(sulfonylurea receptor binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0021955"(central nervous system neuron axonogenesis)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030235"(nitric-oxide synthase regulator activity)|go:"GO:0030911"(TPR domain binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034605"(cellular response to heat)|go:"GO:0036126"(sperm flagellum)|go:"GO:0042026"(protein refolding)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0042470"(melanosome)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043209"(myelin sheath)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0044294"(dendritic growth cone)|go:"GO:0044295"(axonal growth cone)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045040"(protein insertion into mitochondrial outer membrane)|dip:DIP-30975N|entrezgene/locuslink:15519(identity) - - author-confidence:1.2857471810131396 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:t9XAeXdXezYOtJX0wp3IY9/ZMkQ10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:P47738 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-2308120|ensembl:ENSMUSP00000031411 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:aldh2_mouse(display_long)|uniprotkb:Aldh2(gene name)|psi-mi:Aldh2(display_short)|uniprotkb:Ahd-1(gene name synonym)|uniprotkb:Ahd1(gene name synonym)|uniprotkb:ALDH class 2(gene name synonym)|uniprotkb:AHD-M1(gene name synonym)|uniprotkb:ALDHI(gene name synonym)|uniprotkb:ALDH-E2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_033786.1|ensembl:ENSMUSG00000029455(gene)|ensembl:ENSMUST00000031411(transcript)|go:"GO:0004029"("aldehyde dehydrogenase (NAD+) activity")|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006068"(ethanol catabolic process)|go:"GO:0006117"(acetaldehyde metabolic process)|go:"GO:0008631"(intrinsic apoptotic signaling pathway in response to oxidative stress)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043878"("glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity")|go:"GO:0048149"(behavioral response to ethanol)|go:"GO:0050727"(regulation of inflammatory response)|go:"GO:0051287"(NAD binding)|go:"GO:0070404"(NADH binding)|go:"GO:0110095"(cellular detoxification of aldehyde)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016160(Aldehyde dehydrogenase, conserved site)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR029510|mint:P47738|reactome:R-MMU-380612|reactome:R-MMU-71384|entrezgene/locuslink:11669(identity) - - author-confidence:1.2182735680153653 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:C4L2qigIlQeaZH4RsNocJovkPMw10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:Q99P88 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-2551981|ensembl:ENSMUSP00000128819 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:nu155_mouse(display_long)|uniprotkb:Nucleoporin Nup155(gene name synonym)|uniprotkb:155 kDa nucleoporin(gene name synonym)|uniprotkb:Nup155(gene name)|psi-mi:Nup155(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) mint:Q99P88|reactome:R-MMU-159227|reactome:R-MMU-159230|reactome:R-MMU-159231|reactome:R-MMU-159236|reactome:R-MMU-170822|reactome:R-MMU-191859|reactome:R-MMU-3108214|reactome:R-MMU-3232142|reactome:R-MMU-3301854|reactome:R-MMU-3371453|reactome:R-MMU-4085377|reactome:R-MMU-4551638|reactome:R-MMU-4570464|reactome:R-MMU-4615885|reactome:R-MMU-5578749|reactome:R-MMU-9615933|interpro:IPR042538|ensembl:ENSMUSG00000022142(gene)|ensembl:ENSMUST00000163765(transcript)|go:"GO:0000972"(transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005737"(cytoplasm)|go:"GO:0006405"(RNA export from nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006998"(nuclear envelope organization)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031965"(nuclear membrane)|go:"GO:0036228"(protein localization to nuclear inner membrane)|go:"GO:0044611"(nuclear pore inner ring)|go:"GO:0086014"(atrial cardiac muscle cell action potential)|interpro:IPR004870(Nucleoporin, non-repetitive/WGA-negative)|interpro:IPR007187(Nucleoporin, Nup133-like, C-terminal)|interpro:IPR014908(Nup133, N-terminal)|interpro:IPR042533|interpro:IPR042537|refseq:NP_573490.3|entrezgene/locuslink:170762(identity) - - author-confidence:2.1072116440177857 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:VNP6KXs2IzDvHc7Q0re9FpjB/lo10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:Q60865 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-647767|uniprotkb:Q6IMN3|uniprotkb:Q7TT26|uniprotkb:Q60758|uniprotkb:Q61620|ensembl:ENSMUSP00000028607|ensembl:ENSMUSP00000106777 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:capr1_mouse(display_long)|uniprotkb:Cytoplasmic activation- and proliferation-associated protein 1(gene name synonym)|uniprotkb:GPI-anchored membrane protein 1(gene name synonym)|uniprotkb:GPI-anchored protein p137(gene name synonym)|uniprotkb:Membrane component chromosome 11 surface marker 1(gene name synonym)|uniprotkb:Caprin1(gene name)|psi-mi:Caprin1(display_short)|uniprotkb:Gpiap(gene name synonym)|uniprotkb:Gpiap1(gene name synonym)|uniprotkb:Gpip137(gene name synonym)|uniprotkb:M11s1(gene name synonym)|uniprotkb:G5E5(orf name)|uniprotkb:Rng105(gene name synonym)|uniprotkb:RNA granule protein 105(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_001104759.1|refseq:NP_001104760.1|refseq:NP_001104761.1|refseq:NP_001104762.1|refseq:NP_058019.2|ensembl:ENSMUSG00000027184(gene)|ensembl:ENSMUST00000028607(transcript)|ensembl:ENSMUST00000111147(transcript)|go:"GO:0000932"(P-body)|go:"GO:0003723"(RNA binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030027"(lamellipodium)|go:"GO:0030425"(dendrite)|go:"GO:0031252"(cell leading edge)|go:"GO:0045202"(synapse)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0061003"(positive regulation of dendritic spine morphogenesis)|go:"GO:0098794"(postsynapse)|go:"GO:0098978"(glutamatergic synapse)|interpro:IPR022070|interpro:IPR028816|interpro:IPR041637|mint:Q60865|entrezgene/locuslink:53872(identity) - - author-confidence:1.1825732436779188 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:e+Dcb+82jx+CoLhlGBbdSG62dPU10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:P14206 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-1183792|ensembl:ENSMUSP00000035105|ensembl:ENSMUSP00000148933|uniprotkb:Q58E74|uniprotkb:Q8BHL0|uniprotkb:Q8BNL2|uniprotkb:Q91V31|uniprotkb:Q9CY13 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:rssa_mouse(display_long)|uniprotkb:Rpsa(gene name)|psi-mi:Rpsa(display_short)|uniprotkb:Lamr1(gene name synonym)|uniprotkb:Laminin receptor 1(gene name synonym)|uniprotkb:37/67 kDa laminin receptor(gene name synonym)|uniprotkb:Laminin-binding protein precursor p40(gene name synonym)|uniprotkb:37 kDa oncofetal antigen(gene name synonym)|uniprotkb:OFA/iLRP(gene name synonym)|uniprotkb:P40-8(gene name synonym)|uniprotkb:37 kDa laminin receptor precursor(gene name synonym)|uniprotkb:67 kDa laminin receptor(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) ensembl:ENSMUSG00000032518(gene)|refseq:NP_035159.3|ensembl:ENSMUST00000035105(transcript)|ensembl:ENSMUST00000217317(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005055"(laminin receptor activity)|go:"GO:0005604"(basement membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006412"(translation)|go:"GO:0015935"(small ribosomal subunit)|go:"GO:0016020"(membrane)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0030855"(epithelial cell differentiation)|go:"GO:0043022"(ribosome binding)|interpro:IPR005707(Ribosomal protein S2, eukaryotic/archaeal)|interpro:IPR018130|interpro:IPR023591|interpro:IPR027498|interpro:IPR027504|interpro:IPR032281|mint:P14206|reactome:R-MMU-156827|go:"GO:0043025"(neuronal cell body)|reactome:R-MMU-1799339|reactome:R-MMU-6791226|reactome:R-MMU-72649|reactome:R-MMU-72689|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-975956|reactome:R-MMU-975957|go:"GO:0043236"(laminin binding)|go:"GO:0045202"(synapse)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0098609"(cell-cell adhesion)|go:"GO:0098978"(glutamatergic synapse)|interpro:IPR001865(Ribosomal protein S2)|dip:DIP-38089N|entrezgene/locuslink:16785(identity) - - author-confidence:4.15641026098722 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:Qf5VO9t+mZnGd/vuxHsQyYBuYSQ10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:P40142 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-494230|uniprotkb:Q3U7Y1|uniprotkb:Q3UK62|uniprotkb:Q545A1|uniprotkb:Q9ESA0|ensembl:ENSMUSP00000022529 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:tkt_mouse(display_long)|uniprotkb:P68(gene name synonym)|uniprotkb:Tkt(gene name)|psi-mi:Tkt(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_033414.1|ensembl:ENSMUSG00000021957(gene)|ensembl:ENSMUST00000022529(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004802"(transketolase activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005777"(peroxisome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006098"(pentose-phosphate shunt)|go:"GO:0009052"(pentose-phosphate shunt, non-oxidative branch)|go:"GO:0016604"(nuclear body)|go:"GO:0030246"(carbohydrate binding)|go:"GO:0030976"(thiamine pyrophosphate binding)|go:"GO:0040008"(regulation of growth)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043209"(myelin sheath)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046166"(glyceraldehyde-3-phosphate biosynthetic process)|go:"GO:0046390"(ribose phosphate biosynthetic process)|go:"GO:0048029"(monosaccharide binding)|interpro:IPR005474(Transketolase, N-terminal)|interpro:IPR005475(Transketolase, central region)|interpro:IPR009014(Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II)|interpro:IPR020826|interpro:IPR029061|interpro:IPR033248|mint:P40142|reactome:R-MMU-163754|reactome:R-MMU-71336|entrezgene/locuslink:21881(identity) - - author-confidence:1.7573484655108091 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:h2YT3KKVrgDmPcSbJmtevBv1CAI10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:P06151 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-444940|ensembl:ENSMUSP00000036386|ensembl:ENSMUSP00000103267 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:ldha_mouse(display_long)|uniprotkb:LDH muscle subunit(gene name synonym)|uniprotkb:Ldha(gene name)|psi-mi:Ldha(display_short)|uniprotkb:Ldh-1(gene name synonym)|uniprotkb:Ldh1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_034829.1|ensembl:ENSMUSG00000063229(gene)|ensembl:ENSMUST00000005051(transcript)|ensembl:ENSMUST00000048209(transcript)|go:"GO:0004457"(lactate dehydrogenase activity)|go:"GO:0004459"(L-lactate dehydrogenase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0019244"(lactate biosynthetic process from pyruvate)|go:"GO:0019661"(glucose catabolic process to lactate via pyruvate)|go:"GO:0031668"(cellular response to extracellular stimulus)|go:"GO:0035686"(sperm fibrous sheath)|go:"GO:0042802"(identical protein binding)|interpro:IPR001236(Lactate/malate dehydrogenase)|interpro:IPR001557(L-lactate/malate dehydrogenase)|interpro:IPR011304(L-lactate dehydrogenase)|interpro:IPR015955(Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal)|interpro:IPR018177|interpro:IPR022383|interpro:IPR036291|mint:P06151|reactome:R-MMU-70268|entrezgene/locuslink:16828(identity) - - author-confidence:3.792445454366953 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:IErFuOIWq53/XyIxWgUyVi76VnM10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:P62137 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-357187|ensembl:ENSMUSP00000039109|uniprotkb:P08129|uniprotkb:P20653|uniprotkb:P22802|uniprotkb:Q3U7G7|uniprotkb:Q9Z1G2 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:pp1a_mouse(display_long)|uniprotkb:Ppp1ca(gene name)|psi-mi:Ppp1ca(display_short)|uniprotkb:Ppp1a(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005912"(adherens junction)|go:"GO:0005977"(glycogen metabolic process)|go:"GO:0005979"(regulation of glycogen biosynthetic process)|go:"GO:0005981"(regulation of glycogen catabolic process)|go:"GO:0006417"(regulation of translation)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0007049"(cell cycle)|go:"GO:0008157"(protein phosphatase 1 binding)|go:"GO:0009987"(cellular process)|go:"GO:0010288"(response to lead ion)|go:"GO:0016311"(dephosphorylation)|go:"GO:0016791"(phosphatase activity)|go:"GO:0030324"(lung development)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0042587"(glycogen granule)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0043005"(neuron projection)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043153"(entrainment of circadian clock by photoperiod)|go:"GO:0043197"(dendritic spine)|go:"GO:0043204"(perikaryon)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0048754"(branching morphogenesis of an epithelial tube)|go:"GO:0051301"(cell division)|go:"GO:0072357"(PTW/PP1 phosphatase complex)|go:"GO:0098641"(cadherin binding involved in cell-cell adhesion)|go:"GO:0098793"(presynapse)|go:"GO:0098794"(postsynapse)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:2001241"(positive regulation of extrinsic apoptotic signaling pathway in absence of ligand)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|interpro:IPR031675|interpro:IPR037979|mint:P62137|rcsb pdb:5ZQV|rcsb pdb:5ZT0|reactome:R-MMU-180024|ensembl:ENSMUSG00000040385(gene)|ensembl:ENSMUST00000046094(transcript)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0004721"(phosphoprotein phosphatase activity)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|refseq:NP_114074.1|entrezgene/locuslink:19045(identity) - - author-confidence:3.1127112789819695 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:kr38FkfqhN5ex5rxh4ZJbSdd8IM10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:P97855 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-6666067|ensembl:ENSMUSP00000018727 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:g3bp1_mouse(display_long)|uniprotkb:G3bp1(gene name)|psi-mi:G3bp1(display_short)|uniprotkb:G3bp(gene name synonym)|uniprotkb:ATP-dependent DNA helicase VIII(gene name synonym)|uniprotkb:GAP SH3 domain-binding protein 1(gene name synonym)|uniprotkb:HDH-VIII(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) ensembl:ENSMUSG00000018583(gene)|ensembl:ENSMUST00000018727(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032481"(positive regulation of type I interferon production)|go:"GO:0033677"(DNA/RNA helicase activity)|go:"GO:0034063"(stress granule assembly)|go:"GO:0043204"(perikaryon)|go:"GO:0045087"(innate immune response)|go:"GO:0051607"(defense response to virus)|go:"GO:0062029"(positive regulation of stress granule assembly)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002075(Nuclear transport factor 2)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR018222|interpro:IPR032710|interpro:IPR034374|interpro:IPR034375|interpro:IPR035979|interpro:IPR039539|mint:P97855|refseq:NP_038744.1|entrezgene/locuslink:27041(identity) - - author-confidence:7.135066822082079 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:Xxq1G7S8hxbGPvterifIOxpri6U10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:P52480 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-647785|uniprotkb:Q3TBV8|uniprotkb:Q3TBW5|uniprotkb:Q3TC59|uniprotkb:Q3U1X3|uniprotkb:Q3U5P6|uniprotkb:Q4VC20|uniprotkb:Q64484|uniprotkb:Q91YI8|uniprotkb:Q9CWB1|ensembl:ENSMUSP00000034834 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:kpym_mouse(display_long)|uniprotkb:Pkm(gene name)|psi-mi:Pkm(display_short)|uniprotkb:Pk3(gene name synonym)|uniprotkb:Pkm2(gene name synonym)|uniprotkb:Pykm(gene name synonym)|uniprotkb:Pyruvate kinase muscle isozyme(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_035229.2|refseq:XP_006510918.1|refseq:NP_001240812.1|refseq:XP_011240975.1|dip:DIP-40536N|ensembl:ENSMUSG00000032294(gene)|ensembl:ENSMUST00000034834(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0001889"(liver development)|go:"GO:0003729"(mRNA binding)|go:"GO:0004743"(pyruvate kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005791"(rough endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005929"(cilium)|go:"GO:0006006"(glucose metabolic process)|go:"GO:0006096"(glycolytic process)|go:"GO:0006754"(ATP biosynthetic process)|go:"GO:0012501"(programmed cell death)|go:"GO:0016301"(kinase activity)|go:"GO:0030955"(potassium ion binding)|go:"GO:0031100"(animal organ regeneration)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0042802"(identical protein binding)|go:"GO:0042866"(pyruvate biosynthetic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0043403"(skeletal muscle tissue regeneration)|go:"GO:0043531"(ADP binding)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070324"(thyroid hormone binding)|go:"GO:1902912"(pyruvate kinase complex)|go:"GO:1903672"(positive regulation of sprouting angiogenesis)|go:"GO:2000767"(positive regulation of cytoplasmic translation)|interpro:IPR001697(Pyruvate kinase)|interpro:IPR011037(Pyruvate kinase, beta-barrel-like)|interpro:IPR015793(Pyruvate kinase, barrel)|interpro:IPR015795(Pyruvate kinase, C-terminal-like)|interpro:IPR015806(Pyruvate kinase, beta-barrel)|interpro:IPR015813(Pyruvate/Phosphoenolpyruvate kinase, catalytic core)|interpro:IPR018209|interpro:IPR036918|interpro:IPR040442|mint:P52480|reactome:R-MMU-6798695|reactome:R-MMU-70171|entrezgene/locuslink:18746(identity) - - author-confidence:8.489894130688176 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:SWQx3aPATcnlExhyy8afjcrB+xo10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:O88990 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-445061|uniprotkb:Q14DS8|ensembl:ENSMUSP00000006626 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:actn3_mouse(display_long)|uniprotkb:Alpha-actinin skeletal muscle isoform 3(gene name synonym)|uniprotkb:F-actin cross-linking protein(gene name synonym)|uniprotkb:Actn3(gene name)|psi-mi:Actn3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_038484.1|go:"GO:1900159"(positive regulation of bone mineralization involved in bone maturation)|go:"GO:1901078"(negative regulation of relaxation of muscle)|go:"GO:1903715"(regulation of aerobic respiration)|go:"GO:1904025"(positive regulation of glucose catabolic process to lactate via pyruvate)|interpro:IPR001589(Actinin-type, actin-binding, conserved site)|interpro:IPR001715(Calponin-like actin-binding)|interpro:IPR002017(Spectrin repeat)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR014837(EF-hand, Ca insensitive)|interpro:IPR018159|interpro:IPR036872|mint:O88990|reactome:R-MMU-390522|go:"GO:0120163"(negative regulation of cold-induced thermogenesis)|ensembl:ENSMUSG00000006457(gene)|ensembl:ENSMUST00000006626(transcript)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005865"(striated muscle thin filament)|go:"GO:0005903"(brush border)|go:"GO:0005925"(focal adhesion)|go:"GO:0006936"(muscle contraction)|go:"GO:0014728"(regulation of the force of skeletal muscle contraction)|go:"GO:0014732"(skeletal muscle atrophy)|go:"GO:0014883"(transition between fast and slow fiber)|go:"GO:0014894"(response to denervation involved in regulation of muscle adaptation)|go:"GO:0030017"(sarcomere)|go:"GO:0030018"(Z disc)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031448"(positive regulation of fast-twitch skeletal muscle fiber contraction)|go:"GO:0042802"(identical protein binding)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045820"(negative regulation of glycolytic process)|go:"GO:0048041"(focal adhesion assembly)|go:"GO:0048633"(positive regulation of skeletal muscle tissue growth)|go:"GO:0048743"(positive regulation of skeletal muscle fiber development)|go:"GO:0051015"(actin filament binding)|go:"GO:0060349"(bone morphogenesis)|go:"GO:0070885"(negative regulation of calcineurin-NFAT signaling cascade)|go:"GO:0090257"(regulation of muscle system process)|go:"GO:0090324"(negative regulation of oxidative phosphorylation)|entrezgene/locuslink:11474(identity) - - author-confidence:1.449076164856958 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:gNyxg0mfjJPpTG9Ac/DclA6taXQ10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:O88342 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-6914976|ensembl:ENSMUSP00000005234 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:wdr1_mouse(display_long)|uniprotkb:Wdr1(gene name)|psi-mi:Wdr1(display_short)|uniprotkb:Actin-interacting protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) go:"GO:0045199"(maintenance of epithelial cell apical/basal polarity)|go:"GO:0045214"(sarcomere organization)|go:"GO:0048713"(regulation of oligodendrocyte differentiation)|go:"GO:0051015"(actin filament binding)|go:"GO:0060307"(regulation of ventricular cardiac muscle cell membrane repolarization)|go:"GO:1990266"(neutrophil migration)|interpro:IPR001680(WD40 repeat)|interpro:IPR011045(Nitrous oxide reductase, N-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|reactome:R-MMU-114608|ensembl:ENSMUSG00000005103(gene)|ensembl:ENSMUST00000005234(transcript)|go:"GO:0002102"(podosome)|go:"GO:0002446"(neutrophil mediated immunity)|go:"GO:0003779"(actin binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030042"(actin filament depolymerization)|go:"GO:0030043"(actin filament fragmentation)|go:"GO:0030054"(cell junction)|go:"GO:0030220"(platelet formation)|go:"GO:0030834"(regulation of actin filament depolymerization)|go:"GO:0030836"(positive regulation of actin filament depolymerization)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0030865"(cortical cytoskeleton organization)|go:"GO:0040011"(locomotion)|go:"GO:0042247"(establishment of planar polarity of follicular epithelium)|go:"GO:0042995"(cell projection)|go:"GO:0043209"(myelin sheath)|go:"GO:0043297"(apical junction assembly)|refseq:NP_035845.1|entrezgene/locuslink:22388(identity) - - author-confidence:1.5868794167995017 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:PVIlQDv8eXQrI3QBWJOjKlj/Zig10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:G3X925 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-11566171|ensembl:ENSMUSP00000035417 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:g3x925_mouse(display_long)|uniprotkb:Pklr(gene name)|psi-mi:Pklr(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_038659.2|ensembl:ENSMUSG00000041237(gene)|ensembl:ENSMUST00000047111(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0001666"(response to hypoxia)|go:"GO:0004743"(pyruvate kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0006754"(ATP biosynthetic process)|go:"GO:0007584"(response to nutrient)|go:"GO:0009408"(response to heat)|go:"GO:0010226"(response to lithium ion)|go:"GO:0009749"(response to glucose)|go:"GO:0016301"(kinase activity)|go:"GO:0030955"(potassium ion binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0033198"(response to ATP)|go:"GO:0042866"(pyruvate biosynthetic process)|go:"GO:0051591"(response to cAMP)|go:"GO:0071872"(cellular response to epinephrine stimulus)|interpro:IPR001697(Pyruvate kinase)|interpro:IPR011037(Pyruvate kinase, beta-barrel-like)|interpro:IPR015793(Pyruvate kinase, barrel)|interpro:IPR015795(Pyruvate kinase, C-terminal-like)|interpro:IPR015806(Pyruvate kinase, beta-barrel)|interpro:IPR015813(Pyruvate/Phosphoenolpyruvate kinase, catalytic core)|interpro:IPR018209|interpro:IPR036918|interpro:IPR040442|entrezgene/locuslink:18770(identity) - - author-confidence:1.7286097044191646 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:qi3BeyJ0L2S50HjacF4Z0ryFUig10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:P58252 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-773856|uniprotkb:Q544E4|ensembl:ENSMUSP00000046101 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:ef2_mouse(display_long)|uniprotkb:Eef2(gene name)|psi-mi:Eef2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) refseq:NP_031933.1|ensembl:ENSMUSG00000034994(gene)|ensembl:ENSMUST00000047864(transcript)|go:"GO:0002039"(p53 binding)|go:"GO:0002244"(hematopoietic progenitor cell differentiation)|go:"GO:0002931"(response to ischemia)|go:"GO:0003009"(skeletal muscle contraction)|go:"GO:0003723"(RNA binding)|go:"GO:0003746"(translation elongation factor activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005844"(polysome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006414"(translational elongation)|go:"GO:0007568"(aging)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0014009"(glial cell proliferation)|go:"GO:0016235"(aggresome)|go:"GO:0019901"(protein kinase binding)|go:"GO:0032355"(response to estradiol)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035914"(skeletal muscle cell differentiation)|go:"GO:0042493"|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0043022"(ribosome binding)|go:"GO:0045121"(membrane raft)|go:"GO:0045202"(synapse)|go:"GO:0045471"(response to ethanol)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0051015"(actin filament binding)|go:"GO:0051593"(response to folic acid)|go:"GO:1990416"(cellular response to brain-derived neurotrophic factor stimulus)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000767"(positive regulation of cytoplasmic translation)|interpro:IPR000640(Translation elongation factor EFG/EF2, C-terminal)|interpro:IPR000795(Protein synthesis factor, GTP-binding)|interpro:IPR004161(Translation elongation factor EFTu/EF1A, domain 2)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR005517(Translation elongation factor EFG/EF2, domain IV)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR020568|interpro:IPR027417|interpro:IPR031157|interpro:IPR035647|interpro:IPR041095|mint:P58252|reactome:R-MMU-156902|reactome:R-MMU-5358493|reactome:R-MMU-6798695|entrezgene/locuslink:13629(identity) - - author-confidence:1.8053654017446747 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:910/vo3IRjcncyPD4f43dPtS83o10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:O35963 uniprotkb:P48678 intact:EBI-6379521|ensembl:ENSMUSP00000063054|uniprotkb:Q3TWI8 intact:EBI-299212|ensembl:ENSMUSP00000029699|uniprotkb:P11516|uniprotkb:P97859|uniprotkb:Q3TIH0|uniprotkb:Q3TTS8|uniprotkb:Q3UCA0|uniprotkb:Q3UCJ8|uniprotkb:Q91WF2|uniprotkb:Q9DC21|uniprotkb:B3RH23|uniprotkb:B3RH24|uniprotkb:Q3U733|uniprotkb:Q3U7I5|uniprotkb:Q3UCU3 psi-mi:rb33b_mouse(display_long)|uniprotkb:Rab33b(gene name)|psi-mi:Rab33b(display_short) psi-mi:lmna_mouse(display_long)|uniprotkb:Lmna(gene name)|psi-mi:Lmna(display_short)|uniprotkb:Lmn1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566169|imex:IM-24977-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027739(gene)|ensembl:ENSMUST00000054387(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005796"(Golgi lumen)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0098793"(presynapse)|go:"GO:1903358"(regulation of Golgi organization)|go:"GO:1903434"(negative regulation of constitutive secretory pathway)|go:"GO:2000156"(regulation of retrograde vesicle-mediated transport, Golgi to ER)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|mint:O35963|rcsb pdb:1Z06|rcsb pdb:2G77|rcsb pdb:6SUR|reactome:R-MMU-6811438|reactome:R-MMU-8854214|reactome:R-MMU-8873719|dip:DIP-60512N|refseq:NP_058554.1|entrezgene/locuslink:19338(identity) go:"GO:0005829"(cytosol)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006997"(nucleus organization)|go:"GO:0006998"(nuclear envelope organization)|go:"GO:0007517"(muscle organ development)|go:"GO:0008157"(protein phosphatase 1 binding)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016604"(nuclear body)|go:"GO:0016607"(nuclear speck)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030334"(regulation of cell migration)|go:"GO:0030951"(establishment or maintenance of microtubule cytoskeleton polarity)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032204"(regulation of telomere maintenance)|go:"GO:0034504"(protein localization to nucleus)|ensembl:ENSMUSG00000028063(gene)|go:"GO:0034613"(cellular protein localization)|go:"GO:0035861"(site of double-strand break)|go:"GO:0042802"(identical protein binding)|go:"GO:0045669"(positive regulation of osteoblast differentiation)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055015"(ventricular cardiac muscle cell development)|ensembl:ENSMUST00000029699(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0005638"(lamin filament)|go:"GO:0005654"(nucleoplasm)|go:"GO:0072201"(negative regulation of mesenchymal cell proliferation)|go:"GO:1900180"(regulation of protein localization to nucleus)|go:"GO:1903243"(negative regulation of cardiac muscle hypertrophy in response to stress)|go:"GO:1904178"(negative regulation of adipose tissue development)|go:"GO:1990683"(DNA double-strand break attachment to nuclear envelope)|go:"GO:2001237"(negative regulation of extrinsic apoptotic signaling pathway)|interpro:IPR001322(Intermediate filament, C-terminal)|go:"GO:0090201"(negative regulation of release of cytochrome c from mitochondria)|interpro:IPR018039|interpro:IPR036415|interpro:IPR039008|mint:P48678|go:"GO:0090343"(positive regulation of cell aging)|go:"GO:1900114"(positive regulation of histone H3-K9 trimethylation)|rcsb pdb:1UFG|reactome:R-MMU-352238|reactome:R-MMU-4419969|refseq:NP_001002011.2|refseq:NP_001104572.1|refseq:NP_062263.1|refseq:XP_006501136.1|dip:DIP-31384N|entrezgene/locuslink:16905(identity) - - author-confidence:11.59332332534241 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x4MceDjJ1Z+aDXtSU2c7iIc6iuQ10090 rogid:bJz9o/dZoD9E4CRP1FLYihybpwA10090 intact-crc:099634A04ADC2D86|rigid:CQXEhfU5wn03huQguZY63jKgmK4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35276 uniprotkb:Q8QZV4 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 intact:EBI-8321862|intact:MINT-4118093|uniprotkb:Q9JJG4|ensembl:ENSMUSP00000016125 psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:st32c_mouse(display_long)|uniprotkb:Stk32c(gene name)|psi-mi:Stk32c(display_short)|uniprotkb:Pkek(gene name synonym)|uniprotkb:MNCb-1563(orf name) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566286|imex:IM-24977-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) refseq:NP_001156012.1|refseq:NP_067277.2|ensembl:ENSMUSG00000015981(gene)|ensembl:ENSMUST00000016125(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0046872"(metal ion binding)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|mint:Q8QZV4|entrezgene/locuslink:57740(identity) - - comment:mint|author-confidence:3.569675430501286 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 rogid:l0YgQuYKu1amfT3hAzxej/TT9E410090 intact-crc:84D304F5777376EE|rigid:pdIZxttWxgn6+knNUY7Eg7etBOw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35276 uniprotkb:Q8BPN8 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 intact:EBI-6272744|ensembl:ENSMUSP00000113693|uniprotkb:B0V2P4|uniprotkb:Q3TNY5|uniprotkb:Q69ZX5|uniprotkb:Q8CCU3 psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:dmxl2_mouse(display_long)|uniprotkb:Dmxl2(gene name)|psi-mi:Dmxl2(display_short)|uniprotkb:Kiaa0856(gene name synonym)|uniprotkb:Rabconnectin-3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566286|imex:IM-24977-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) ensembl:ENSMUSG00000041268(gene)|ensembl:ENSMUST00000118600(transcript)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0007608"(sensory perception of smell)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0042593"(glucose homeostasis)|go:"GO:0043291"(RAVE complex)|go:"GO:0098992"(neuronal dense core vesicle)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR022033|interpro:IPR036322|mint:Q8BPN8|go:"GO:0007283"(spermatogenesis)|refseq:XP_006511148.2|entrezgene/locuslink:235380(identity) - - author-confidence:2.4945601630790817 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 rogid:6uQuMnUYqGc8AF3fTtUWEHX2Z1w10090 intact-crc:84D304F5777376EE|rigid:pdIZxttWxgn6+knNUY7Eg7etBOw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35276 uniprotkb:Q9CZT8 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 intact:EBI-911649|uniprotkb:Q80WV9|ensembl:ENSMUSP00000003502|ensembl:ENSMUSP00000102261|uniprotkb:Q920F1 psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:rab3b_mouse(display_long)|uniprotkb:Rab3b(gene name)|psi-mi:Rab3b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566286|imex:IM-24977-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) ensembl:ENSMUSG00000003411(gene)|ensembl:ENSMUST00000003502(transcript)|ensembl:ENSMUST00000106650(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051586"(positive regulation of dopamine uptake involved in synaptic transmission)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097494"(regulation of vesicle size)|go:"GO:0098691"(dopaminergic synapse)|go:"GO:0098693"(regulation of synaptic vesicle cycle)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:Q9CZT8|reactome:R-MMU-8873719|refseq:NP_076026.1|entrezgene/locuslink:69908(identity) - - author-confidence:54.40033272702283 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 rogid:4WkkwI5ty+Y60GheT3a0s2RVr2Q10090 intact-crc:84D304F5777376EE|rigid:pdIZxttWxgn6+knNUY7Eg7etBOw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35276 uniprotkb:Q8BRK8 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 intact:EBI-11566288|uniprotkb:B1ASQ8|uniprotkb:Q3UYM4|ensembl:ENSMUSP00000030243 psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:aapk2_mouse(display_long)|uniprotkb:Acetyl-CoA carboxylase kinase(gene name synonym)|uniprotkb:Hydroxymethylglutaryl-CoA reductase kinase(gene name synonym)|uniprotkb:Prkaa2(gene name)|psi-mi:Prkaa2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566286|imex:IM-24977-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) refseq:NP_835279.2|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045821"(positive regulation of glycolytic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0047322"("[hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity")|go:"GO:0048511"(rhythmic process)|go:"GO:0050405"([acetyl-CoA carboxylase] kinase activity)|go:"GO:0055089"(fatty acid homeostasis)|go:"GO:0062028"(regulation of stress granule assembly)|go:"GO:0070507"(regulation of microtubule cytoskeleton organization)|go:"GO:0071277"(cellular response to calcium ion)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0071380"(cellular response to prostaglandin E stimulus)|go:"GO:0097009"(energy homeostasis)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1903829"(positive regulation of protein localization)|go:"GO:1904428"(negative regulation of tubulin deacetylation)|go:"GO:2000758"(positive regulation of peptidyl-lysine acetylation)|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR028375|interpro:IPR028783|interpro:IPR032270|reactome:R-MMU-1632852|reactome:R-MMU-163680|reactome:R-MMU-200425|reactome:R-MMU-380972|reactome:R-MMU-5628897|reactome:R-MMU-6804756|go:"GO:0043066"(negative regulation of apoptotic process)|ensembl:ENSMUSG00000028518(gene)|ensembl:ENSMUST00000030243(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004679"(AMP-activated protein kinase activity)|go:"GO:0004712"(protein serine/threonine/tyrosine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006633"(fatty acid biosynthetic process)|go:"GO:0006695"(cholesterol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0008610"(lipid biosynthetic process)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0014823"(response to activity)|go:"GO:0014850"(response to muscle activity)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0016241"(regulation of macroautophagy)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0016607"(nuclear speck)|go:"GO:0019216"(regulation of lipid metabolic process)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031000"(response to caffeine)|go:"GO:0031588"(nucleotide-activated protein kinase complex)|go:"GO:0031669"(cellular response to nutrient levels)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0035174"(histone serine kinase activity)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035690"|go:"GO:0042149"(cellular response to glucose starvation)|go:"GO:0042593"(glucose homeostasis)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0043025"(neuronal cell body)|go:"GO:0004672"(protein kinase activity)|entrezgene/locuslink:108079(identity) - - author-confidence:1.1865002793550379 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 rogid:WgZjtam/1W1ciarjWKQHKZmSU/s10090 intact-crc:84D304F5777376EE|rigid:pdIZxttWxgn6+knNUY7Eg7etBOw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35276 uniprotkb:Q8BHC1 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566286|imex:IM-24977-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - - author-confidence:1.0797563095860725 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:84D304F5777376EE|rigid:pdIZxttWxgn6+knNUY7Eg7etBOw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35276 uniprotkb:P63011 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566286|imex:IM-24977-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) - - author-confidence:15.854514038260037 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 intact-crc:84D304F5777376EE|rigid:pdIZxttWxgn6+knNUY7Eg7etBOw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35276 uniprotkb:Q8CFZ4 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 intact:EBI-11566294|ensembl:ENSMUSP00000064131 psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:gpc3_mouse(display_long)|uniprotkb:Gpc3(gene name)|psi-mi:Gpc3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566286|imex:IM-24977-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) refseq:NP_057906.2|ensembl:ENSMUSG00000055653(gene)|ensembl:ENSMUST00000069360(transcript)|go:"GO:0001658"(branching involved in ureteric bud morphogenesis)|go:"GO:0001822"(kidney development)|go:"GO:0005764"(lysosome)|go:"GO:0005796"(Golgi lumen)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009617"(response to bacterium)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0009948"(anterior/posterior axis specification)|go:"GO:0009986"(cell surface)|go:"GO:0010171"(body morphogenesis)|go:"GO:0010466"(negative regulation of peptidase activity)|go:"GO:0016477"(cell migration)|go:"GO:0030282"(bone mineralization)|go:"GO:0030316"(osteoclast differentiation)|go:"GO:0030324"(lung development)|go:"GO:0030513"(positive regulation of BMP signaling pathway)|go:"GO:0035116"(embryonic hindlimb morphogenesis)|go:"GO:0040008"(regulation of growth)|go:"GO:0042074"(cell migration involved in gastrulation)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0045807"(positive regulation of endocytosis)|go:"GO:0045879"(negative regulation of smoothened signaling pathway)|go:"GO:0045880"(positive regulation of smoothened signaling pathway)|go:"GO:0045926"(negative regulation of growth)|go:"GO:0046326"(positive regulation of glucose import)|go:"GO:0046658"(anchored component of plasma membrane)|go:"GO:0050680"(negative regulation of epithelial cell proliferation)|go:"GO:0060422"(peptidyl-dipeptidase inhibitor activity)|go:"GO:0060828"(regulation of canonical Wnt signaling pathway)|go:"GO:0060976"(coronary vasculature development)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0072111"(cell proliferation involved in kidney development)|go:"GO:0072138"(mesenchymal cell proliferation involved in ureteric bud development)|go:"GO:0072180"(mesonephric duct morphogenesis)|go:"GO:0072203"(cell proliferation involved in metanephros development)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:1905475"(regulation of protein localization to membrane)|go:"GO:2000050"(regulation of non-canonical Wnt signaling pathway)|go:"GO:2000096"(positive regulation of Wnt signaling pathway, planar cell polarity pathway)|interpro:IPR001863(Glypican)|interpro:IPR015501(Glypican 3)|interpro:IPR019803|reactome:R-MMU-1971475|reactome:R-MMU-2022928|reactome:R-MMU-2024096|reactome:R-MMU-381426|reactome:R-MMU-8957275|reactome:R-MMU-975634|entrezgene/locuslink:14734(identity) - - author-confidence:4.233165958312731 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 rogid:HmsJuKaE1Tz2SqFkBWtuN9PONDA10090 intact-crc:84D304F5777376EE|rigid:pdIZxttWxgn6+knNUY7Eg7etBOw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35276 uniprotkb:B2RXR6 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 intact:EBI-11566298|uniprotkb:B2RXN6|uniprotkb:B7ZWK8|ensembl:ENSMUSP00000137616 psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:anr44_mouse(display_long)|uniprotkb:Ankyrin repeat domain-containing protein 44(gene name synonym)|uniprotkb:Ankrd44(gene name)|psi-mi:Ankrd44(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566286|imex:IM-24977-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) refseq:NP_001074902.2|ensembl:ENSMUSG00000052331(gene)|ensembl:ENSMUST00000179030(transcript)|interpro:IPR002110(Ankyrin)|interpro:IPR020683|interpro:IPR036770|entrezgene/locuslink:329154(identity) - - author-confidence:1.2596859442468034 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 rogid:u2gh8Mr3OLcC72DfwHC0bMCFj3c10090 intact-crc:84D304F5777376EE|rigid:pdIZxttWxgn6+knNUY7Eg7etBOw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35276 uniprotkb:Q8CG50 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 intact:EBI-9988154|ensembl:ENSMUSP00000077716 psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:rab43_mouse(display_long)|uniprotkb:Rab43(gene name)|psi-mi:Rab43(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566286|imex:IM-24977-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) refseq:NP_001034483.1|go:"GO:0035526"(retrograde transport, plasma membrane to Golgi)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0071346"(cellular response to interferon-gamma)|go:"GO:0090382"(phagosome maturation)|go:"GO:1901998"(toxin transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-6811440|reactome:R-MMU-8873719|ensembl:ENSMUSG00000030055(gene)|ensembl:ENSMUST00000078647(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0019068"(virion assembly)|go:"GO:0030670"(phagocytic vesicle membrane)|entrezgene/locuslink:69834(identity) - - author-confidence:2.837461778340256 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 rogid:3EcThtzOwZ4l7xfP94R3uPpw23410090 intact-crc:84D304F5777376EE|rigid:pdIZxttWxgn6+knNUY7Eg7etBOw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35276 uniprotkb:A2APF3 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 intact:EBI-11566304|uniprotkb:Q3Y6S0|uniprotkb:B9EKP6|ensembl:ENSMUSP00000091845|ensembl:ENSMUSP00000135932 psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:ctcfl_mouse(display_long)|uniprotkb:Boris(gene name synonym)|uniprotkb:Brother of the regulator of imprinted sites(gene name synonym)|uniprotkb:CCCTC-binding factor(gene name synonym)|uniprotkb:CTCF paralog(gene name synonym)|uniprotkb:CTCF-like protein(gene name synonym)|uniprotkb:Ctcfl(gene name)|psi-mi:Ctcfl(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566286|imex:IM-24977-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) refseq:NP_001074856.1|ensembl:ENSMUSG00000070495(gene)|ensembl:ENSMUST00000094287(transcript)|ensembl:ENSMUST00000179693(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016571"(histone methylation)|go:"GO:0016604"(nuclear body)|go:"GO:0042393"(histone binding)|go:"GO:0043035"(chromatin insulator sequence binding)|go:"GO:0043046"(DNA methylation involved in gamete generation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|refseq:XP_017174657.1|dip:DIP-29209N|entrezgene/locuslink:664799(identity) - - caution:This sequence has been withdrawn from Uniprot.|crc64:BECF76F0C84FA7F0|author-confidence:12.01333764117247 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 rogid:Aimhm6eR/zsvBnioNpL8sTz0FcM10090 intact-crc:84D304F5777376EE|rigid:pdIZxttWxgn6+knNUY7Eg7etBOw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35276 uniprotkb:P62823 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566286|imex:IM-24977-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) - - author-confidence:1.9615543207210038 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 intact-crc:84D304F5777376EE|rigid:pdIZxttWxgn6+knNUY7Eg7etBOw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q9Z110 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-8440240|intact:MINT-1853829|uniprotkb:Q8BGM2|uniprotkb:Q9R1P6|ensembl:ENSMUSP00000025979 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:p5cs_mouse(display_long)|uniprotkb:Aldh18a1(gene name)|psi-mi:Aldh18a1(display_short)|uniprotkb:P5cs(gene name synonym)|uniprotkb:Pycs(gene name synonym)|uniprotkb:Aldehyde dehydrogenase family 18 member A1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_705782.2|refseq:NP_062672.2|ensembl:ENSMUSG00000025007(gene)|ensembl:ENSMUST00000025979(transcript)|go:"GO:0004349"(glutamate 5-kinase activity)|go:"GO:0004350"(glutamate-5-semialdehyde dehydrogenase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0006536"(glutamate metabolic process)|go:"GO:0006561"(proline biosynthetic process)|go:"GO:0006592"(ornithine biosynthetic process)|go:"GO:0008652"(cellular amino acid biosynthetic process)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0019240"(citrulline biosynthetic process)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0055129"(L-proline biosynthetic process)|interpro:IPR000965(Gamma-glutamyl phosphate reductase GPR)|interpro:IPR001048(Aspartate/glutamate/uridylate kinase)|interpro:IPR001057(Glutamate 5-kinase)|interpro:IPR005715(Glutamate 5-kinase, ProB-related)|interpro:IPR005766(delta l-pyrroline-5-carboxylate synthetase)|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR019797|interpro:IPR020593|interpro:IPR036393|interpro:IPR041744|mint:Q9Z110|reactome:R-MMU-8964539|entrezgene/locuslink:56454(identity) - - comment:mint|author-confidence:1.5552846297608611 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:bzLtsuFfMe3vEyBVOmcAcLYvbVs10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q91YM4 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-8353709|intact:MINT-4121960|uniprotkb:Q6ZQ19|uniprotkb:Q8C6D1|uniprotkb:Q3TKZ4|uniprotkb:O89082|ensembl:ENSMUSP00000000394|ensembl:ENSMUSP00000114256|ensembl:ENSMUSP00000140835 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:fakd4_mouse(display_long)|uniprotkb:Tbrg4(gene name)|psi-mi:Tbrg4(display_short)|uniprotkb:Kiaa0948(gene name synonym)|uniprotkb:Transforming growth factor beta regulator 4(gene name synonym)|uniprotkb:Protein TBRG4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_001123929.1|refseq:NP_598772.1|refseq:XP_006514670.1|refseq:XP_006514671.1|ensembl:ENSMUSG00000000384(gene)|ensembl:ENSMUST00000000394(transcript)|ensembl:ENSMUST00000156969(transcript)|ensembl:ENSMUST00000189268(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0016071"(mRNA metabolic process)|go:"GO:0044528"(regulation of mitochondrial mRNA stability)|go:"GO:0090615"(mitochondrial mRNA processing)|interpro:IPR010622(FAST kinase leucine-rich)|interpro:IPR013579(FAST kinase-like protein, subdomain 2)|interpro:IPR013584(RAP domain)|interpro:IPR016024(Armadillo-type fold)|mint:Q91YM4|entrezgene/locuslink:21379(identity) - - comment:mint|function:May play a role in cell cycle progression|author-confidence:2.4761744960452963 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:in3JOCGu68ilWk/IHs5nqyhJwr010090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q8C0I1 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-8369753|intact:MINT-4113860 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:adas_mouse(display_long)|uniprotkb:Agps(gene name)|psi-mi:Agps(display_short)|uniprotkb:Alkylglycerone-phosphate synthase(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) interpro:IPR016169(CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2)|interpro:IPR016166(FAD-binding, type 2)|interpro:IPR016167(FAD-binding, type 2, subdomain 1)|refseq:NP_766254.2|interpro:IPR025650|interpro:IPR016164(FAD-linked oxidase-like, C-terminal)|interpro:IPR016171(Vanillyl-alcohol oxidase, C-terminal subdomain 2)|interpro:IPR036318|mint:Q8C0I1|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005777"(peroxisome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005782"(peroxisomal matrix)|go:"GO:0008609"(alkylglycerone-phosphate synthase activity)|go:"GO:0008610"(lipid biosynthetic process)|go:"GO:0008611"(ether lipid biosynthetic process)|go:"GO:0016491"(oxidoreductase activity)|go:"GO:0071949"(FAD binding)|reactome:R-MMU-75896|reactome:R-MMU-9033241|interpro:IPR004113(FAD-linked oxidase, C-terminal)|interpro:IPR006094(FAD linked oxidase, N-terminal)|entrezgene/locuslink:228061(identity) - - comment:mint|author-confidence:109.20122309311179 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:D0B2AleUI6e+iQHYeSSbl9yQLJc10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q9CZJ2 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-8402862|intact:MINT-4098029|ensembl:ENSMUSP00000096950 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:hs12b_mouse(display_long)|uniprotkb:Hspa12b(gene name)|psi-mi:Hspa12b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_082582.1|ensembl:ENSMUSG00000074793(gene)|ensembl:ENSMUST00000099349(transcript)|go:"GO:0005524"(ATP binding)|interpro:IPR029509|interpro:IPR043129|mint:Q9CZJ2|reactome:R-MMU-3371453|entrezgene/locuslink:72630(identity) - - comment:mint|author-confidence:1.0779712933692003 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:6kn9CIRv4IkunQffEbHVeSVB+UQ10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q8K126 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-11566390|ensembl:ENSMUSP00000022600 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:rf1m_mouse(display_long)|uniprotkb:Mtrf1(gene name)|psi-mi:Mtrf1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_666072.3|ensembl:ENSMUSG00000022022(gene)|ensembl:ENSMUST00000022600(transcript)|go:"GO:0003747"(translation release factor activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0070126"(mitochondrial translational termination)|interpro:IPR000352(Class I peptide chain release factor)|interpro:IPR005139(PCRF)|entrezgene/locuslink:211253(identity) - - author-confidence:317.4865543653464 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:b/28NXZEWBto/PfRj9OqYJrJI+w10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:A2RSJ4 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-11566394|uniprotkb:Q8CHD4|uniprotkb:B2RQV0|uniprotkb:E9QMH4|ensembl:ENSMUSP00000020112 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:uh1bl_mouse(display_long)|uniprotkb:Kiaa0701(gene name synonym)|uniprotkb:Uhrf1bp1l(gene name)|psi-mi:Uhrf1bp1l(display_short)|uniprotkb:Ship164(gene name synonym)|uniprotkb:Syntaxin-6 Habc-interacting protein of 164 kDa(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_083442.2|ensembl:ENSMUSG00000019951(gene)|ensembl:ENSMUST00000020112(transcript)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0062069"(GARP complex binding)|interpro:IPR026728|interpro:IPR026854|reactome:R-MMU-9696270|entrezgene/locuslink:75089(identity) - - author-confidence:1.6313263205996227 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:d1f8XL4s1WH75RYJaSDLG1iF6j010090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q9JIS8 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-11566383|uniprotkb:O55069|uniprotkb:Q9ET57|ensembl:ENSMUSP00000112130 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:s12a4_mouse(display_long)|uniprotkb:Electroneutral potassium-chloride cotransporter 1(gene name synonym)|uniprotkb:Erythroid K-Cl cotransporter 1(gene name synonym)|uniprotkb:Kcc1(gene name synonym)|uniprotkb:Slc12a4(gene name)|psi-mi:Slc12a4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_033221.1|ensembl:ENSMUST00000116429(transcript)|go:"GO:0006884"(cell volume homeostasis)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0015379"("potassium:chloride symporter activity")|go:"GO:0016021"(integral component of membrane)|go:"GO:0019901"(protein kinase binding)|go:"GO:0045202"(synapse)|go:"GO:0055064"(chloride ion homeostasis)|go:"GO:0055075"(potassium ion homeostasis)|go:"GO:1902476"(chloride transmembrane transport)|go:"GO:1990573"(potassium ion import across plasma membrane)|interpro:IPR000076(K-Cl co-transporter)|interpro:IPR000622(K-Cl Co-transporter, type 1)|interpro:IPR004841(Amino acid permease-associated region)|interpro:IPR004842(Na-K-Cl cotransporter superfamily)|interpro:IPR018491|reactome:R-MMU-426117|ensembl:ENSMUSG00000017765(gene)|entrezgene/locuslink:20498(identity) - - author-confidence:1.721112636308301 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:QbxF/FzOycoNIBPRshFAo1J84Us10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q9CPP6 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-2934595|ensembl:ENSMUSP00000023851|uniprotkb:Q9CY90|uniprotkb:Q9D2P2|uniprotkb:Q9D703|uniprotkb:Q9D739 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:ndua5_mouse(display_long)|uniprotkb:Ndufa5(gene name)|psi-mi:Ndufa5(display_short)|uniprotkb:Complex I subunit B13(gene name synonym)|uniprotkb:Complex I-13kD-B(gene name synonym)|uniprotkb:NADH-ubiquinone oxidoreductase 13 kDa-B subunit(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) ensembl:ENSMUSG00000023089(gene)|ensembl:ENSMUST00000023851(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005747"(mitochondrial respiratory chain complex I)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0022904"(respiratory electron transport chain)|go:"GO:0032981"(mitochondrial respiratory chain complex I assembly)|go:"GO:0032991"(protein-containing complex)|go:"GO:0045271"(respiratory chain complex I)|interpro:IPR006806(ETC complex I subunit)|mint:Q9CPP6|rcsb pdb:6G2J|rcsb pdb:6G72|rcsb pdb:6ZR2|rcsb pdb:6ZTQ|rcsb pdb:7AK5|rcsb pdb:7AK6|rcsb pdb:7B93|reactome:R-MMU-611105|reactome:R-MMU-6799198|reactome:R-MMU-9013408|refseq:NP_080890.1|entrezgene/locuslink:68202(identity) - - author-confidence:1.0551230857932343 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:XmfRnQ0vfDwf3KjUdlYymXdjfjM10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q6ZWZ7 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-11566379|ensembl:ENSMUSP00000078654|ensembl:ENSMUSP00000157556 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:q6zwz7_mouse(display_long)|uniprotkb:Rpl17(gene name)|psi-mi:Rpl17(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_001002239.2|refseq:XP_006526059.1|ensembl:ENSMUST00000079716(transcript)|ensembl:ENSMUST00000237431(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|go:"GO:0015934"(large ribosomal subunit)|interpro:IPR001063(Ribosomal protein L22/L17)|interpro:IPR005721(Ribosomal protein L22/L17, eukaryotic/archaeal)|interpro:IPR018260|interpro:IPR036394|mint:Q6ZWZ7|ensembl:ENSMUSG00000062328(gene)|refseq:XP_017173408.1|entrezgene/locuslink:319195(identity) - - author-confidence:129.61341903791194 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:uOwwkReFtX9IKq2iuQB/yN/30eg10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q91WD5 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-772751|uniprotkb:Q3U5Y9|uniprotkb:Q3UJX7|uniprotkb:Q99L23|uniprotkb:Q3TNA8|ensembl:ENSMUSP00000013737 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:ndus2_mouse(display_long)|uniprotkb:NADH-ubiquinone oxidoreductase 49 kDa subunit(gene name synonym)|uniprotkb:Complex I-49kD(gene name synonym)|uniprotkb:Ndufs2(gene name)|psi-mi:Ndufs2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_694704.1|ensembl:ENSMUSG00000013593(gene)|ensembl:ENSMUST00000013737(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005747"(mitochondrial respiratory chain complex I)|go:"GO:0006120"(mitochondrial electron transport, NADH to ubiquinone)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0019826"(oxygen sensor activity)|go:"GO:0022008"(neurogenesis)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032981"(mitochondrial respiratory chain complex I assembly)|go:"GO:0042063"(gliogenesis)|go:"GO:0042775"(mitochondrial ATP synthesis coupled electron transport)|go:"GO:0046872"(metal ion binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051287"(NAD binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|go:"GO:0061351"(neural precursor cell proliferation)|go:"GO:0071453"(cellular response to oxygen levels)|interpro:IPR001135(NADH-ubiquinone oxidoreductase, chain 49kDa)|interpro:IPR014029(NADH-ubiquinone oxidoreductase, chain 49kDa, conserved site)|interpro:IPR022885|interpro:IPR029014|mint:Q91WD5|rcsb pdb:6G2J|rcsb pdb:6G72|rcsb pdb:6ZR2|rcsb pdb:6ZTQ|rcsb pdb:7AK5|rcsb pdb:7AK6|rcsb pdb:7B93|reactome:R-MMU-611105|reactome:R-MMU-6799198|entrezgene/locuslink:226646(identity) - - author-confidence:9.441307774281128 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:dk8e26C1hIdTZvDnX5nE1n+juwk10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:P08113 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-772439|uniprotkb:P11427|ensembl:ENSMUSP00000020238 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:enpl_mouse(display_long)|uniprotkb:Heat shock protein 90 kDa beta member 1(gene name synonym)|uniprotkb:94 kDa glucose-regulated protein(gene name synonym)|uniprotkb:Grp94(gene name synonym)|uniprotkb:Endoplasmic reticulum resident protein 99(gene name synonym)|uniprotkb:Polymorphic tumor rejection antigen 1(gene name synonym)|uniprotkb:Tumor rejection antigen gp96(gene name synonym)|uniprotkb:Hsp90b1(gene name)|psi-mi:Hsp90b1(display_short)|uniprotkb:Tra-1(gene name synonym)|uniprotkb:Tra1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_035761.1|dip:DIP-32352N|ensembl:ENSMUSG00000020048(gene)|ensembl:ENSMUST00000020238(transcript)|go:"GO:0001666"(response to hypoxia)|go:"GO:0003723"(RNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005788"(endoplasmic reticulum lumen)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005790"(smooth endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030496"(midbody)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031247"(actin rod assembly)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033018"(sarcoplasmic reticulum lumen)|go:"GO:0034663"(endoplasmic reticulum chaperone complex)|go:"GO:0042470"(melanosome)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043666"(regulation of phosphoprotein phosphatase activity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050750"(low-density lipoprotein particle receptor binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0071318"(cellular response to ATP)|interpro:IPR001404(Heat shock protein Hsp90)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR019805|interpro:IPR020568|interpro:IPR020575|interpro:IPR036890|interpro:IPR037196|mint:P08113|reactome:R-MMU-1679131|reactome:R-MMU-3000480|reactome:R-MMU-381426|reactome:R-MMU-6785807|reactome:R-MMU-8957275|entrezgene/locuslink:22027(identity) - - author-confidence:1.5476090600283103 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:6hS1V+GSgQiDvTYBpzbfdL5FDcE10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q9EQH3 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-775825|uniprotkb:Q61123|ensembl:ENSMUSP00000034131 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:vps35_mouse(display_long)|uniprotkb:Vesicle protein sorting 35(gene name synonym)|uniprotkb:Maternal-embryonic 3(gene name synonym)|uniprotkb:Vps35(gene name)|psi-mi:Vps35(display_short)|uniprotkb:Mem3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_075373.1|dip:DIP-32210N|ensembl:ENSMUSG00000031696(gene)|ensembl:ENSMUST00000034131(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006624"(vacuolar protein processing)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007040"(lysosome organization)|go:"GO:0007416"(synapse assembly)|go:"GO:0010008"(endosome membrane)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010821"(regulation of mitochondrion organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030904"(retromer complex)|go:"GO:0030906"(retromer, cargo-selective complex)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0031648"(protein destabilization)|go:"GO:0031748"(D1 dopamine receptor binding)|go:"GO:0032268"(regulation of cellular protein metabolic process)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032463"(negative regulation of protein homooligomerization)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043653"(mitochondrial fragmentation involved in apoptotic process)|go:"GO:0045056"(transcytosis)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050882"(voluntary musculoskeletal movement)|go:"GO:0060161"(positive regulation of dopamine receptor signaling pathway)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061357"(positive regulation of Wnt protein secretion)|go:"GO:0090141"(positive regulation of mitochondrial fission)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:0090326"(positive regulation of locomotion involved in locomotory behavior)|go:"GO:0097422"(tubular endosome)|go:"GO:0098793"(presynapse)|go:"GO:0098794"(postsynapse)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099003"(vesicle-mediated transport in synapse)|go:"GO:0099073"(mitochondrion-derived vesicle)|go:"GO:0099074"(mitochondrion to lysosome transport)|go:"GO:0099639"(neurotransmitter receptor transport, endosome to plasma membrane)|go:"GO:1901215"(negative regulation of neuron death)|go:"GO:1902823"(negative regulation of late endosome to lysosome transport)|go:"GO:1902950"(regulation of dendritic spine maintenance)|go:"GO:1903181"(positive regulation of dopamine biosynthetic process)|go:"GO:1903364"(positive regulation of cellular protein catabolic process)|go:"GO:1903828"(negative regulation of protein localization)|go:"GO:1905166"(negative regulation of lysosomal protein catabolic process)|go:"GO:2000331"(regulation of terminal button organization)|interpro:IPR005378(Vacuolar protein sorting-associated protein 35)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR042491|mint:Q9EQH3|rcsb pdb:6VAB|rcsb pdb:6VAC|reactome:R-MMU-3238698|entrezgene/locuslink:65114(identity) - - author-confidence:2.091324999687622 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:dK5TqSajxrGKjiNwRjeZCV519XE10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:O55143 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-770763|uniprotkb:Q9R2A9|uniprotkb:Q9WUT5|ensembl:ENSMUSP00000031423|ensembl:ENSMUSP00000135935 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:at2a2_mouse(display_long)|uniprotkb:Calcium pump 2(gene name synonym)|uniprotkb:Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform(gene name synonym)|uniprotkb:"Endoplasmic reticulum class 1/2 Ca(2+) ATPase"(gene name synonym)|uniprotkb:Atp2a2(gene name)|psi-mi:Atp2a2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_001103610.1|refseq:NP_033852.1|go:"GO:0005509"(calcium ion binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005388"(P-type calcium transporter activity)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006816"(calcium ion transport)|go:"GO:0006874"(cellular calcium ion homeostasis)|go:"GO:0006937"(regulation of muscle contraction)|go:"GO:0006984"(ER-nucleus signaling pathway)|go:"GO:0006996"(organelle organization)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008553"(P-type proton-exporting transporter activity)|go:"GO:0010882"(regulation of cardiac muscle contraction by calcium ion signaling)|go:"GO:0012506"(vesicle membrane)|go:"GO:0014801"(longitudinal sarcoplasmic reticulum)|go:"GO:0014883"(transition between fast and slow fiber)|go:"GO:0014898"(cardiac muscle hypertrophy in response to stress)|go:"GO:0016020"(membrane)|go:"GO:0016240"(autophagosome membrane docking)|go:"GO:0016529"(sarcoplasmic reticulum)|go:"GO:0019899"(enzyme binding)|go:"GO:0031234"(extrinsic component of cytoplasmic side of plasma membrane)|go:"GO:0031775"(lutropin-choriogonadotropic hormone receptor binding)|go:"GO:0032469"(endoplasmic reticulum calcium ion homeostasis)|go:"GO:0032470"(positive regulation of endoplasmic reticulum calcium ion concentration)|go:"GO:0032496"(response to lipopolysaccharide)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033017"(sarcoplasmic reticulum membrane)|go:"GO:0033292"(T-tubule organization)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0034605"(cellular response to heat)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0044548"(S100 protein binding)|go:"GO:0045822"(negative regulation of heart contraction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055119"(relaxation of cardiac muscle)|go:"GO:0061831"(apical ectoplasmic specialization)|go:"GO:0070296"(sarcoplasmic reticulum calcium ion transport)|go:"GO:0070588"(calcium ion transmembrane transport)|go:"GO:0086036"(regulation of cardiac muscle cell membrane potential)|go:"GO:0086039"(P-type calcium transporter activity involved in regulation of cardiac muscle cell membrane potential)|go:"GO:0090534"(calcium ion-transporting ATPase complex)|go:"GO:0097470"(ribbon synapse)|go:"GO:0098909"(regulation of cardiac muscle cell action potential involved in regulation of contraction)|go:"GO:0120025"(plasma membrane bounded cell projection)|go:"GO:0140056"(organelle localization by membrane tethering)|go:"GO:1900121"(negative regulation of receptor binding)|go:"GO:1903233"(regulation of calcium ion-dependent exocytosis of neurotransmitter)|go:"GO:1903515"(calcium ion transport from cytosol to endoplasmic reticulum)|go:"GO:1990036"(calcium ion import into sarcoplasmic reticulum)|go:"GO:1990456"(mitochondrion-endoplasmic reticulum membrane tethering)|interpro:IPR001757(ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter)|interpro:IPR004014(ATPase, P-type cation-transporter, N-terminal)|interpro:IPR005782(Calcium ATPase)|interpro:IPR006068(ATPase, P-type cation-transporter, C-terminal)|interpro:IPR008250(E1-E2 ATPase-associated region)|interpro:IPR018303|interpro:IPR023214|interpro:IPR023298|interpro:IPR023299|interpro:IPR036412|interpro:IPR044492|mint:O55143|reactome:R-MMU-418359|reactome:R-MMU-5578775|reactome:R-MMU-936837|ensembl:ENSMUSG00000029467(gene)|ensembl:ENSMUST00000031423(transcript)|ensembl:ENSMUST00000179939(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0002026"(regulation of the force of heart contraction)|go:"GO:0003009"(skeletal muscle contraction)|entrezgene/locuslink:11938(identity) - - author-confidence:1.6197237151899524 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:LJG8hpHG2pO9ePikEKYbhsuCeRI10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q3UGX2 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-11566371|ensembl:ENSMUSP00000021458 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:q3ugx2_mouse(display_long)|uniprotkb:Spnb1(gene name synonym)|uniprotkb:Sptb(gene name)|psi-mi:Sptb(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_038703.3|ensembl:ENSMUSG00000021061(gene)|ensembl:ENSMUST00000021458(transcript)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005829"(cytosol)|go:"GO:0008091"(spectrin)|go:"GO:0014731"(spectrin-associated cytoskeleton)|go:"GO:0030506"(ankyrin binding)|go:"GO:0051015"(actin filament binding)|go:"GO:0051693"(actin filament capping)|interpro:IPR001589(Actinin-type, actin-binding, conserved site)|interpro:IPR001605(Spectrin/pleckstrin-like)|interpro:IPR001715(Calponin-like actin-binding)|interpro:IPR001849(Pleckstrin-like)|interpro:IPR002017(Spectrin repeat)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR016343(Spectrin, beta subunit)|interpro:IPR018159|interpro:IPR036872|interpro:IPR041681|entrezgene/locuslink:20741(identity) - - author-confidence:1.135984320417551 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:3vhE91pVaMVt5H01bxPQ9WQXMvI10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q05920 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-773565 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:pyc_mouse(display_long)|uniprotkb:Pyruvic carboxylase(gene name synonym)|uniprotkb:Pc(gene name)|psi-mi:Pc(display_short)|uniprotkb:Pcx(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) interpro:IPR013785(Aldolase-type TIM barrel)|interpro:IPR011761(ATP-grasp fold)|interpro:IPR001882(Biotin-binding site)|interpro:IPR011764(Biotin carboxylation region)|interpro:IPR005482(Biotin carboxylase, C-terminal)|interpro:IPR000089(Biotin/lipoyl attachment)|interpro:IPR005479(Carbamoyl phosphate synthetase, large subunit, ATP-binding)|interpro:IPR005481(Carbamoyl phosphate synthase, large subunit, N-terminal)|interpro:IPR003379(Conserved carboxylase region)|interpro:IPR016185(PreATP-grasp-like fold)|interpro:IPR000891(Pyruvate carboxyltransferase)|interpro:IPR005930(Pyruvate carboxylase)|interpro:IPR011054(Rudiment single hybrid motif)|interpro:IPR011053(Single hybrid motif)|mint:Q05920|go:"GO:0004736"(pyruvate carboxylase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006090"(pyruvate metabolic process)|go:"GO:0006094"(gluconeogenesis)|go:"GO:0006107"(oxaloacetate metabolic process)|go:"GO:0006629"(lipid metabolic process)|go:"GO:0009374"(biotin binding)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0019074"(viral RNA genome packaging)|go:"GO:0031406"(carboxylic acid binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0044791"(obsolete positive regulation by host of viral release from host cell)|go:"GO:0044794"(positive regulation by host of viral process)|go:"GO:0046872"(metal ion binding)|go:"GO:0071073"(positive regulation of phospholipid biosynthetic process)|reactome:R-MMU-196780|reactome:R-MMU-70263|entrezgene/locuslink:18517(identity) - - author-confidence:326.1005071231072 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:lsSatV0UMI9POKETZcn4gD/gp1Q10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:P07724 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-1183810|uniprotkb:Q3TV03|uniprotkb:Q61802|uniprotkb:Q8C7C7|uniprotkb:Q8C7H3|uniprotkb:Q8CG74|ensembl:ENSMUSP00000031314 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:albu_mouse(display_long)|uniprotkb:Alb(gene name)|psi-mi:Alb(display_short)|uniprotkb:Alb1(gene name synonym)|uniprotkb:Alb-1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_033784.2|ensembl:ENSMUSG00000029368(gene)|ensembl:ENSMUST00000031314(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005504"(fatty acid binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005604"(basement membrane)|go:"GO:0005615"(extracellular space)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0015643"(toxic substance binding)|go:"GO:0019825"(oxygen binding)|go:"GO:0019899"(enzyme binding)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0046010"(positive regulation of circadian sleep/wake cycle, non-REM sleep)|go:"GO:0051087"(chaperone binding)|go:"GO:0051659"(maintenance of mitochondrion location)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072341"(modified amino acid binding)|go:"GO:0140272"(exogenous protein binding)|go:"GO:1903981"(enterobactin binding)|interpro:IPR000264(Serum albumin)|interpro:IPR014760(Serum albumin, N-terminal)|interpro:IPR020857|interpro:IPR020858|interpro:IPR021177|mint:P07724|reactome:R-MMU-114608|reactome:R-MMU-159418|reactome:R-MMU-189451|reactome:R-MMU-189483|reactome:R-MMU-2168880|reactome:R-MMU-381426|reactome:R-MMU-879518|reactome:R-MMU-8957275|reactome:R-MMU-8964058|reactome:R-MMU-9707564|entrezgene/locuslink:11657(identity) - - author-confidence:1.2889602102035096 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:R7zO/mB332rAl8J+WrXfsHzjSYs10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:O88342 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-6914976|ensembl:ENSMUSP00000005234 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:wdr1_mouse(display_long)|uniprotkb:Wdr1(gene name)|psi-mi:Wdr1(display_short)|uniprotkb:Actin-interacting protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) go:"GO:0045199"(maintenance of epithelial cell apical/basal polarity)|go:"GO:0045214"(sarcomere organization)|go:"GO:0048713"(regulation of oligodendrocyte differentiation)|go:"GO:0051015"(actin filament binding)|go:"GO:0060307"(regulation of ventricular cardiac muscle cell membrane repolarization)|go:"GO:1990266"(neutrophil migration)|interpro:IPR001680(WD40 repeat)|interpro:IPR011045(Nitrous oxide reductase, N-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|reactome:R-MMU-114608|ensembl:ENSMUSG00000005103(gene)|ensembl:ENSMUST00000005234(transcript)|go:"GO:0002102"(podosome)|go:"GO:0002446"(neutrophil mediated immunity)|go:"GO:0003779"(actin binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030042"(actin filament depolymerization)|go:"GO:0030043"(actin filament fragmentation)|go:"GO:0030054"(cell junction)|go:"GO:0030220"(platelet formation)|go:"GO:0030834"(regulation of actin filament depolymerization)|go:"GO:0030836"(positive regulation of actin filament depolymerization)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0030865"(cortical cytoskeleton organization)|go:"GO:0040011"(locomotion)|go:"GO:0042247"(establishment of planar polarity of follicular epithelium)|go:"GO:0042995"(cell projection)|go:"GO:0043209"(myelin sheath)|go:"GO:0043297"(apical junction assembly)|refseq:NP_035845.1|entrezgene/locuslink:22388(identity) - - author-confidence:1.6341823465466183 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:PVIlQDv8eXQrI3QBWJOjKlj/Zig10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q80TP3 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-2553642|uniprotkb:Q810V6|uniprotkb:Q698K9|uniprotkb:Q9CXE9|uniprotkb:Q6PFQ9|uniprotkb:Q80VL4|uniprotkb:Q6PEQ8 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:ubr5_mouse(display_long)|uniprotkb:Ubr5(gene name)|psi-mi:Ubr5(display_short)|uniprotkb:Edd(gene name synonym)|uniprotkb:Edd1(gene name synonym)|uniprotkb:Kiaa0896(gene name synonym)|uniprotkb:E3 ubiquitin-protein ligase, HECT domain-containing 1(gene name synonym)|uniprotkb:Hyperplastic discs protein homolog(gene name synonym)|uniprotkb:HECT-type E3 ubiquitin transferase UBR5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0032700"(negative regulation of interleukin-17 production)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034450"(ubiquitin-ubiquitin ligase activity)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050847"(progesterone receptor signaling pathway)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:1901315"(negative regulation of histone H2A K63-linked ubiquitination)|go:"GO:2000779"(regulation of double-strand break repair)|go:"GO:2000780"(negative regulation of double-strand break repair)|interpro:IPR000569(HECT)|interpro:IPR002004(Polyadenylate-binding protein/Hyperplastic disc protein)|interpro:IPR003126(Zinc finger, N-recognin)|interpro:IPR009091(Regulator of chromosome condensation/beta-lactamase-inhibitor protein II)|interpro:IPR024725|interpro:IPR035983|interpro:IPR036053|go:"GO:0061630"(ubiquitin protein ligase activity)|refseq:NP_001074828.2|refseq:NP_001106192.1|dip:DIP-56890N|mint:Q80TP3|entrezgene/locuslink:70790(identity) - - author-confidence:9.656402228414246 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:iUtn1CtWFtqWQV3UH06xJ5R5Ux010090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:P40142 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-494230|uniprotkb:Q3U7Y1|uniprotkb:Q3UK62|uniprotkb:Q545A1|uniprotkb:Q9ESA0|ensembl:ENSMUSP00000022529 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:tkt_mouse(display_long)|uniprotkb:P68(gene name synonym)|uniprotkb:Tkt(gene name)|psi-mi:Tkt(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_033414.1|ensembl:ENSMUSG00000021957(gene)|ensembl:ENSMUST00000022529(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004802"(transketolase activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005777"(peroxisome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006098"(pentose-phosphate shunt)|go:"GO:0009052"(pentose-phosphate shunt, non-oxidative branch)|go:"GO:0016604"(nuclear body)|go:"GO:0030246"(carbohydrate binding)|go:"GO:0030976"(thiamine pyrophosphate binding)|go:"GO:0040008"(regulation of growth)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043209"(myelin sheath)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046166"(glyceraldehyde-3-phosphate biosynthetic process)|go:"GO:0046390"(ribose phosphate biosynthetic process)|go:"GO:0048029"(monosaccharide binding)|interpro:IPR005474(Transketolase, N-terminal)|interpro:IPR005475(Transketolase, central region)|interpro:IPR009014(Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II)|interpro:IPR020826|interpro:IPR029061|interpro:IPR033248|mint:P40142|reactome:R-MMU-163754|reactome:R-MMU-71336|entrezgene/locuslink:21881(identity) - - author-confidence:1.8989002515087847 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:h2YT3KKVrgDmPcSbJmtevBv1CAI10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35278 uniprotkb:Q6P1E1 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-647033|uniprotkb:Q6PDK9|uniprotkb:Q6PF85|uniprotkb:Q8BW47|ensembl:ENSMUSP00000124863 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:zmiz1_mouse(display_long)|uniprotkb:Retinoic acid-induced protein 17(gene name synonym)|uniprotkb:PIAS-like protein Zimp10(gene name synonym)|uniprotkb:Zmiz1(gene name)|psi-mi:Zmiz1(display_short)|uniprotkb:Zimp10(gene name synonym)|uniprotkb:Rai17(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566377|imex:IM-24977-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_899031.2|refseq:NP_001297595.1|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007179"(transforming growth factor beta receptor signaling pathway)|go:"GO:0007296"(vitellogenesis)|go:"GO:0007569"(cell aging)|go:"GO:0008270"(zinc ion binding)|go:"GO:0021852"(pyramidal neuron migration to cerebral cortex)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0030521"(androgen receptor signaling pathway)|go:"GO:0033233"(regulation of protein sumoylation)|go:"GO:0045582"(positive regulation of T cell differentiation)|go:"GO:0045747"(positive regulation of Notch signaling pathway)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046332"(SMAD binding)|go:"GO:0048096"|go:"GO:0048146"(positive regulation of fibroblast proliferation)|go:"GO:0048589"(developmental growth)|go:"GO:0048844"(artery morphogenesis)|go:"GO:0060395"(SMAD protein signal transduction)|go:"GO:1903508"(positive regulation of nucleic acid-templated transcription)|interpro:IPR004181(Zinc finger, MIZ-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR040797|go:"GO:0005737"(cytoplasm)|ensembl:ENSMUSG00000007817(gene)|ensembl:ENSMUST00000162645(transcript)|go:"GO:0001570"(vasculogenesis)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0003007"(heart morphogenesis)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|entrezgene/locuslink:328365(identity) - - author-confidence:1.7486018860481345 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:YDCZA1JO5KiYFqN/y8VMYNLfUTA10090 intact-crc:34212BDB99C7A6BF|rigid:i5GeX3hbmeCVJMZIUoP7VSGLqvg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q5SSZ5 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-8391679|uniprotkb:Q3TZ54|intact:MINT-5064604|uniprotkb:Q8BJA7|ensembl:ENSMUSP00000020695 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:tens3_mouse(display_long)|uniprotkb:Tns3(gene name)|psi-mi:Tns3(display_short)|uniprotkb:Tens1(gene name synonym)|uniprotkb:Tensin-like SH2 domain-containing protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) refseq:XP_011242030.1|refseq:NP_001077056.1|refseq:XP_006514804.1|refseq:XP_017170096.1|ensembl:ENSMUSG00000020422(gene)|ensembl:ENSMUST00000020695(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0005925"(focal adhesion)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0016477"(cell migration)|go:"GO:0048286"(lung alveolus development)|interpro:IPR000387(Protein-tyrosine phosphatase)|interpro:IPR000980(SH2 motif)|interpro:IPR003595(Protein-tyrosine phosphatase, catalytic)|interpro:IPR006020(Phosphotyrosine interaction region)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013625(Tensin phosphotyrosine-binding domain)|interpro:IPR014020(C2 tensin-type)|interpro:IPR029021|interpro:IPR029023|interpro:IPR033929|interpro:IPR035012|interpro:IPR035892|interpro:IPR036860|mint:Q5SSZ5|reactome:R-MMU-8875513|entrezgene/locuslink:319939(identity) - - comment:mint|author-confidence:1.150621453395904 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:sFclRyViYiHhJ+v7RyQPP/+9Nfs10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q3TJZ6 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-8318357|intact:MINT-1858128|uniprotkb:Q99KJ2|ensembl:ENSMUSP00000108126 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:fa98a_mouse(display_long)|uniprotkb:Fam98a(gene name)|psi-mi:Fam98a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) refseq:NP_598508.2|ensembl:ENSMUSG00000002017(gene)|ensembl:ENSMUST00000112507(transcript)|go:"GO:0006479"(protein methylation)|go:"GO:0008276"(protein methyltransferase activity)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0032418"(lysosome localization)|go:"GO:0072669"(tRNA-splicing ligase complex)|go:"GO:1900029"(positive regulation of ruffle assembly)|interpro:IPR018797|mint:Q3TJZ6|entrezgene/locuslink:72722(identity) - - comment:mint|author-confidence:5.572642127453728 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:ZvcKhnXQtXNW4jEx2X8IvALCfZU10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q571I9 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-8391142|intact:MINT-4113910|uniprotkb:Q3U6I2|intact:MINT-1869939|uniprotkb:Q8VD78|uniprotkb:Q3UMC3|uniprotkb:Q8C0L4 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:a16a1_mouse(display_long)|uniprotkb:Aldh16a1(gene name)|psi-mi:Aldh16a1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|refseq:NP_666066.1|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|mint:Q571I9|go:"GO:0016620"(oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor)|interpro:IPR011408(Aldehyde dehydrogenase predicted, duplicated region)|entrezgene/locuslink:69748(identity) - - author-confidence:1.342153693466305 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:CJyLPOT7Nc94VcIpenyDgHuKR/I10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:P56371 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) - - comment:mint|function:Protein transport. Probably involved in vesicular traffic|author-confidence:1.4928090621703296 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q8BVF2 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-8585834|ensembl:ENSMUSP00000027247|uniprotkb:Q9D0W3|uniprotkb:Q99JX2|uniprotkb:Q3TH06|intact:MINT-4604227 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:pdcl3_mouse(display_long)|uniprotkb:Pdcl3(gene name)|psi-mi:Pdcl3(display_short)|uniprotkb:Viaf1(gene name synonym)|uniprotkb:Viral IAP-associated factor 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) ensembl:ENSMUSG00000026078(gene)|ensembl:ENSMUST00000027247(transcript)|go:"GO:0001525"(angiogenesis)|go:"GO:0001938"(positive regulation of endothelial cell proliferation)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006457"(protein folding)|go:"GO:0006915"(apoptotic process)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034605"(cellular response to heat)|go:"GO:0043184"(vascular endothelial growth factor receptor 2 binding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0045766"(positive regulation of angiogenesis)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050730"(regulation of peptidyl-tyrosine phosphorylation)|go:"GO:0050821"(protein stabilization)|go:"GO:0061077"(chaperone-mediated protein folding)|go:"GO:0097356"(perinucleolar compartment)|go:"GO:1903645"(negative regulation of chaperone-mediated protein folding)|go:"GO:2000059"(negative regulation of ubiquitin-dependent protein catabolic process)|interpro:IPR024253|interpro:IPR036249|refseq:NP_081126.2|entrezgene/locuslink:68833(identity) - - function:"Modulates the activation of caspases during apoptosis. Slows the rate of ATP hydrolysis by the chaperonin containing TCP1 (CCT) complex in the presence of unfolded substrate proteins, such as actin and tubulins, and thus perturbs substrate protein folding. May play an important role in optimal cytoskeletal protein biogenesis"|comment:mint|author-confidence:1.3707139529362624 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:LV1H34PoMv/9NI4P4/Nr51UjZPs10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:P29341 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-773902|uniprotkb:Q99L36|ensembl:ENSMUSP00000001809 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:pabp1_mouse(display_long)|uniprotkb:Pabpc1(gene name)|psi-mi:Pabpc1(display_short)|uniprotkb:Pabp1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) dip:DIP-32127N|refseq:NP_032800.2|refseq:XP_011243641.1|ensembl:ENSMUSG00000022283(gene)|ensembl:ENSMUST00000001809(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008143"("poly(A) binding")|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0008380"(RNA splicing)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0030027"(lamellipodium)|go:"GO:0030425"(dendrite)|go:"GO:0031047"(gene silencing by RNA)|go:"GO:0031252"(cell leading edge)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0045070"(positive regulation of viral genome replication)|go:"GO:0045202"(synapse)|go:"GO:0060213"("positive regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1900153"(positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:1990124"(messenger ribonucleoprotein complex)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000623"(negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002004(Polyadenylate-binding protein/Hyperplastic disc protein)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR006515(Polyadenylate binding protein, human types 1, 2, 3, 4)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|interpro:IPR036053|mint:P29341|reactome:R-MMU-156827|reactome:R-MMU-429947|reactome:R-MMU-450408|reactome:R-MMU-72649|reactome:R-MMU-975956|reactome:R-MMU-975957|entrezgene/locuslink:18458(identity) - - author-confidence:1.6739882081828712 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:jvlQW6kphF2tkZwK72DtAXDPHvs10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q9JIS8 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-11566383|uniprotkb:O55069|uniprotkb:Q9ET57|ensembl:ENSMUSP00000112130 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:s12a4_mouse(display_long)|uniprotkb:Electroneutral potassium-chloride cotransporter 1(gene name synonym)|uniprotkb:Erythroid K-Cl cotransporter 1(gene name synonym)|uniprotkb:Kcc1(gene name synonym)|uniprotkb:Slc12a4(gene name)|psi-mi:Slc12a4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) refseq:NP_033221.1|ensembl:ENSMUST00000116429(transcript)|go:"GO:0006884"(cell volume homeostasis)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0015379"("potassium:chloride symporter activity")|go:"GO:0016021"(integral component of membrane)|go:"GO:0019901"(protein kinase binding)|go:"GO:0045202"(synapse)|go:"GO:0055064"(chloride ion homeostasis)|go:"GO:0055075"(potassium ion homeostasis)|go:"GO:1902476"(chloride transmembrane transport)|go:"GO:1990573"(potassium ion import across plasma membrane)|interpro:IPR000076(K-Cl co-transporter)|interpro:IPR000622(K-Cl Co-transporter, type 1)|interpro:IPR004841(Amino acid permease-associated region)|interpro:IPR004842(Na-K-Cl cotransporter superfamily)|interpro:IPR018491|reactome:R-MMU-426117|ensembl:ENSMUSG00000017765(gene)|entrezgene/locuslink:20498(identity) - - author-confidence:2.6636011988168913 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:QbxF/FzOycoNIBPRshFAo1J84Us10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q8BHC1 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - - author-confidence:1.104568035000598 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q00898 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-11566514|uniprotkb:Q545P1|uniprotkb:Q3UJ83|ensembl:ENSMUSP00000082130|ensembl:ENSMUSP00000113606 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:a1at5_mouse(display_long)|uniprotkb:Alpha-1 protease inhibitor 5(gene name synonym)|uniprotkb:Dom5(gene name synonym)|uniprotkb:Serine protease inhibitor 1-5(gene name synonym)|uniprotkb:Serine protease inhibitor A1e(gene name synonym)|uniprotkb:Spi1-5(gene name synonym)|uniprotkb:Serpina1e(gene name)|psi-mi:Serpina1e(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) refseq:NP_033273.1|ensembl:ENSMUSG00000072849(gene)|ensembl:ENSMUST00000085054(transcript)|ensembl:ENSMUST00000122229(transcript)|go:"GO:0002020"(protease binding)|go:"GO:0004866"(endopeptidase inhibitor activity)|go:"GO:0004867"(serine-type endopeptidase inhibitor activity)|go:"GO:0005615"(extracellular space)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0010951"(negative regulation of endopeptidase activity)|go:"GO:0034097"(response to cytokine)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043434"(response to peptide hormone)|interpro:IPR000215(Protease inhibitor I4, serpin)|interpro:IPR023795|interpro:IPR023796|interpro:IPR036186|interpro:IPR042178|interpro:IPR042185|entrezgene/locuslink:20704(identity) - - author-confidence:183.30099478953767 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:Emy2seTSX7bRmDx8/dgEwKHSc4I10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q61285 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-80965|uniprotkb:A0A0R4J0U5|ensembl:ENSMUSP00000068940|uniprotkb:Q8BQ63|uniprotkb:Q8C4B6 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:abcd2_mouse(display_long)|uniprotkb:Abcd2(gene name)|psi-mi:Abcd2(display_short)|uniprotkb:Aldr(gene name synonym)|uniprotkb:Adrenoleukodystrophy-related protein(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR011527(ABC transporter, transmembrane region, type 1)|interpro:IPR017871|interpro:IPR027417|interpro:IPR031239|interpro:IPR036640|reactome:R-MMU-1369062|reactome:R-MMU-9603798|ensembl:ENSMUSG00000055782(gene)|ensembl:ENSMUST00000069511(transcript)|go:"GO:0000038"(very long-chain fatty acid metabolic process)|go:"GO:0005324"(long-chain fatty acid transporter activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005777"(peroxisome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0006635"(fatty acid beta-oxidation)|go:"GO:0007031"(peroxisome organization)|go:"GO:0009617"(response to bacterium)|go:"GO:0015910"(long-chain fatty acid import into peroxisome)|go:"GO:0016021"(integral component of membrane)|go:"GO:0032000"(positive regulation of fatty acid beta-oxidation)|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|interpro:IPR003439(ABC transporter-like)|go:"GO:0042760"(very long-chain fatty acid catabolic process)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043217"(myelin maintenance)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0047617"(acyl-CoA hydrolase activity)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1900016"(negative regulation of cytokine production involved in inflammatory response)|go:"GO:1903427"(negative regulation of reactive oxygen species biosynthetic process)|go:"GO:1990535"(neuron projection maintenance)|go:"GO:2001280"(positive regulation of unsaturated fatty acid biosynthetic process)|refseq:NP_036124.2|entrezgene/locuslink:26874(identity) - - author-confidence:1.6713106838575627 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:3q8vy+9lDdGp7YjE4VrWJE4RrsQ10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:O08808 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-1026445|ensembl:ENSMUSP00000111297 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:diap1_mouse(display_long)|uniprotkb:Diaphanous-related formin-1(gene name synonym)|uniprotkb:p140mDIA(gene name synonym)|uniprotkb:Diaph1(gene name)|psi-mi:Diaph1(display_short)|uniprotkb:Diap1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) refseq:NP_031884.1|ensembl:ENSMUSG00000024456(gene)|ensembl:ENSMUST00000115634(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0005522"(profilin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005815"(microtubule organizing center)|go:"GO:0005903"(brush border)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0007420"(brain development)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030041"(actin filament polymerization)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0031175"(neuron projection development)|go:"GO:0031267"(small GTPase binding)|go:"GO:0032587"(ruffle membrane)|go:"GO:0032886"(regulation of microtubule-based process)|go:"GO:0035372"(protein localization to microtubule)|go:"GO:0042802"(identical protein binding)|go:"GO:0043005"(neuron projection)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0051493"(regulation of cytoskeleton organization)|go:"GO:0071420"(cellular response to histamine)|go:"GO:0072686"(mitotic spindle)|interpro:IPR010465(DRF autoregulatory)|interpro:IPR010472(Diaphanous FH3)|interpro:IPR010473(Diaphanous GTPase-binding)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR014767(Diaphanous autoregulatory)|interpro:IPR014768(GTPase-binding/formin homology 3)|interpro:IPR015425(Actin-binding FH2)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR027653|interpro:IPR042201|mint:O08808|rcsb pdb:1Z2C|rcsb pdb:2BAP|rcsb pdb:2BNX|rcsb pdb:2F31|rcsb pdb:2V8F|rcsb pdb:3EG5|rcsb pdb:3O4X|rcsb pdb:3OBV|rcsb pdb:4UWX|reactome:R-MMU-5663220|reactome:R-MMU-6785631|reactome:R-MMU-6798695|reactome:R-MMU-8980692|reactome:R-MMU-9013026|reactome:R-MMU-9013106|reactome:R-MMU-9013405|reactome:R-MMU-9035034|rcsb pdb:1V9D|dip:DIP-29028N|entrezgene/locuslink:13367(identity) - - author-confidence:47.305250268198684 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:cSWfzfilw9WnzAOYZE3i+0x9G5c10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:P47738 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-2308120|ensembl:ENSMUSP00000031411 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:aldh2_mouse(display_long)|uniprotkb:Aldh2(gene name)|psi-mi:Aldh2(display_short)|uniprotkb:Ahd-1(gene name synonym)|uniprotkb:Ahd1(gene name synonym)|uniprotkb:ALDH class 2(gene name synonym)|uniprotkb:AHD-M1(gene name synonym)|uniprotkb:ALDHI(gene name synonym)|uniprotkb:ALDH-E2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) refseq:NP_033786.1|ensembl:ENSMUSG00000029455(gene)|ensembl:ENSMUST00000031411(transcript)|go:"GO:0004029"("aldehyde dehydrogenase (NAD+) activity")|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006068"(ethanol catabolic process)|go:"GO:0006117"(acetaldehyde metabolic process)|go:"GO:0008631"(intrinsic apoptotic signaling pathway in response to oxidative stress)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043878"("glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity")|go:"GO:0048149"(behavioral response to ethanol)|go:"GO:0050727"(regulation of inflammatory response)|go:"GO:0051287"(NAD binding)|go:"GO:0070404"(NADH binding)|go:"GO:0110095"(cellular detoxification of aldehyde)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016160(Aldehyde dehydrogenase, conserved site)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR029510|mint:P47738|reactome:R-MMU-380612|reactome:R-MMU-71384|entrezgene/locuslink:11669(identity) - - author-confidence:1.0163882338871049 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:C4L2qigIlQeaZH4RsNocJovkPMw10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q924N4 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-620972|uniprotkb:A2AGK1|ensembl:ENSMUSP00000028549|uniprotkb:Q924N3 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:s12a6_mouse(display_long)|uniprotkb:Electroneutral potassium-chloride cotransporter 3(gene name synonym)|uniprotkb:K-Cl cotransporter 3(gene name synonym)|uniprotkb:Slc12a6(gene name)|psi-mi:Slc12a6(display_short)|uniprotkb:Kcc3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) ensembl:ENSMUSG00000027130(gene)|ensembl:ENSMUST00000028549(transcript)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006811"(ion transport)|go:"GO:0006884"(cell volume homeostasis)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0008519"(ammonium transmembrane transporter activity)|go:"GO:0015079"(potassium ion transmembrane transporter activity)|go:"GO:0015379"("potassium:chloride symporter activity")|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030424"(axon)|go:"GO:0045202"(synapse)|go:"GO:0055064"(chloride ion homeostasis)|go:"GO:0055075"(potassium ion homeostasis)|go:"GO:0071476"(cellular hypotonic response)|go:"GO:0071477"(cellular hypotonic salinity response)|go:"GO:0140157"(ammonium import across plasma membrane)|go:"GO:1902476"(chloride transmembrane transport)|go:"GO:1990573"(potassium ion import across plasma membrane)|interpro:IPR000076(K-Cl co-transporter)|interpro:IPR004841(Amino acid permease-associated region)|interpro:IPR004842(Na-K-Cl cotransporter superfamily)|interpro:IPR018491|interpro:IPR030364|reactome:R-MMU-426117|refseq:NP_598410.2|entrezgene/locuslink:107723(identity) - - author-confidence:1.9535217477450781 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:DsFyn24ksop7mIzunj96LE6yheY10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q640N3 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-4326075|uniprotkb:E9QKX0|uniprotkb:Q571I5 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:rhg30_mouse(display_long)|uniprotkb:Arhgap30(gene name)|psi-mi:Arhgap30(display_short)|uniprotkb:Rho-type GTPase-activating protein 30(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) refseq:NP_001005508.2|interpro:IPR008936(Rho GTPase activation protein)|interpro:IPR000198(RhoGAP)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0043231"(intracellular membrane-bounded organelle)|reactome:R-MMU-8980692|reactome:R-MMU-9013148|reactome:R-MMU-9013149|reactome:R-MMU-9013420|entrezgene/locuslink:226652(identity) - - author-confidence:1.3103804048059775 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:6ThouE4dmXi8MQuZ6odULeofha010090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q7TMM8 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-11566508|uniprotkb:Q8CC71|uniprotkb:Q3V031|ensembl:ENSMUSP00000070098|ensembl:ENSMUSP00000149927|ensembl:ENSMUSP00000150318 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:par16_mouse(display_long)|uniprotkb:ADP-ribosyltransferase diphtheria toxin-like 15(gene name synonym)|uniprotkb:Artd15(gene name synonym)|uniprotkb:Poly [ADP-ribose] polymerase 16(gene name synonym)|uniprotkb:Parp16(gene name)|psi-mi:Parp16(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) refseq:NP_803411.3|ensembl:ENSMUSG00000032392(gene)|ensembl:ENSMUST00000069000(transcript)|ensembl:ENSMUST00000213396(transcript)|ensembl:ENSMUST00000216702(transcript)|go:"GO:0003950"(NAD+ ADP-ribosyltransferase activity)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006471"(protein ADP-ribosylation)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019900"(kinase binding)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0043539"(protein serine/threonine kinase activator activity)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0070213"(protein auto-ADP-ribosylation)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071902"(positive regulation of protein serine/threonine kinase activity)|go:"GO:0140289"(protein mono-ADP-ribosylation)|go:"GO:1990404"(protein ADP-ribosylase activity)|go:"GO:1990830"(cellular response to leukemia inhibitory factor)|interpro:IPR012317("Poly(ADP-ribose) polymerase, catalytic region")|interpro:IPR041400|reactome:R-MMU-197264|entrezgene/locuslink:214424(identity) - - author-confidence:13.268561044877092 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:WWzooa+R5IZXmdJ3CEIHswStywE10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q80XK6 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-11566520|uniprotkb:Q9CWK6|uniprotkb:Q8BIV0|uniprotkb:Q8BIQ4|uniprotkb:A0PJL7|uniprotkb:Q8R1H5|ensembl:ENSMUSP00000037441 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:atg2b_mouse(display_long)|uniprotkb:Atg2b(gene name)|psi-mi:Atg2b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) refseq:NP_083930.5|ensembl:ENSMUSG00000041341(gene)|ensembl:ENSMUST00000041055(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005811"(lipid droplet)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0044805"(late nucleophagy)|go:"GO:0061709"(reticulophagy)|go:"GO:0120013"(lipid transfer activity)|interpro:IPR015412(ATG2, C-terminal)|interpro:IPR026849|interpro:IPR026854|mint:Q80XK6|entrezgene/locuslink:76559(identity) - - author-confidence:3.4998812964215777 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:jnUVUCip0mX6qajisFBvpNEqixE10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q91ZU6 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-446159|uniprotkb:Q60845|uniprotkb:Q9WU50|uniprotkb:Q1KP04|uniprotkb:Q3I6J6|uniprotkb:Q8K5D4|uniprotkb:Q91ZU7|uniprotkb:Q91ZU8|uniprotkb:Q60824|uniprotkb:E9PXE5|uniprotkb:E9QL23|uniprotkb:S4R1U5|ensembl:ENSMUSP00000095392 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:dyst_mouse(display_long)|uniprotkb:Dystonia musculorum protein(gene name synonym)|uniprotkb:Hemidesmosomal plaque protein(gene name synonym)|uniprotkb:Dst(gene name)|psi-mi:Dst(display_short)|uniprotkb:Bpag1(gene name synonym)|uniprotkb:Macf2(gene name synonym)|uniprotkb:Microtubule actin cross-linking factor 2(gene name synonym)|uniprotkb:Bullous pemphigoid antigen 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) refseq:NP_034211.2|refseq:NP_598594.2|refseq:NP_604443.2|go:"GO:0014704"(intercalated disc)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030018"(Z disc)|go:"GO:0030056"(hemidesmosome)|go:"GO:0030424"(axon)|go:"GO:0031122"(cytoplasmic microtubule organization)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031581"(hemidesmosome assembly)|go:"GO:0031673"(H zone)|go:"GO:0035371"(microtubule plus-end)|go:"GO:0042060"(wound healing)|go:"GO:0042383"(sarcolemma)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0045098"(type III intermediate filament)|go:"GO:0045104"(intermediate filament cytoskeleton organization)|go:"GO:0046907"(intracellular transport)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051010"(microtubule plus-end binding)|go:"GO:0097038"(perinuclear endoplasmic reticulum)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR001101(Plectin repeat)|interpro:IPR001452(Src homology-3)|interpro:IPR001589(Actinin-type, actin-binding, conserved site)|interpro:IPR001715(Calponin-like actin-binding)|interpro:IPR002017(Spectrin repeat)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR003108(Growth-arrest-specific protein 2)|interpro:IPR011992(EF-Hand type)|interpro:IPR018159|interpro:IPR018247|interpro:IPR035915|interpro:IPR036534|interpro:IPR036872|interpro:IPR041573|interpro:IPR041615|interpro:IPR043197|mint:Q91ZU6|rcsb pdb:2IAK|reactome:R-MMU-446107|reactome:R-MMU-9013420|reactome:R-MMU-9013424|reactome:R-MMU-9696264|reactome:R-MMU-9696270|reactome:R-MMU-9696273|ensembl:ENSMUSG00000026131(gene)|ensembl:ENSMUST00000097785(transcript)|go:"GO:0001725"(stress fiber)|go:"GO:0003779"(actin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005737"(cytoplasm)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005882"(intermediate filament)|go:"GO:0005925"(focal adhesion)|go:"GO:0005938"(cell cortex)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0007155"(cell adhesion)|go:"GO:0007409"(axonogenesis)|go:"GO:0008017"(microtubule binding)|go:"GO:0008090"(retrograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0014069"(postsynaptic density)|entrezgene/locuslink:13518(identity) - - author-confidence:35.25353477836346 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:kQkueAqyWyioKh0Hf1vVtIaHRY810090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35279 uniprotkb:Q91WD5 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 intact:EBI-772751|uniprotkb:Q3U5Y9|uniprotkb:Q3UJX7|uniprotkb:Q99L23|uniprotkb:Q3TNA8|ensembl:ENSMUSP00000013737 psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:ndus2_mouse(display_long)|uniprotkb:NADH-ubiquinone oxidoreductase 49 kDa subunit(gene name synonym)|uniprotkb:Complex I-49kD(gene name synonym)|uniprotkb:Ndufs2(gene name)|psi-mi:Ndufs2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566531|imex:IM-24977-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) refseq:NP_694704.1|ensembl:ENSMUSG00000013593(gene)|ensembl:ENSMUST00000013737(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005747"(mitochondrial respiratory chain complex I)|go:"GO:0006120"(mitochondrial electron transport, NADH to ubiquinone)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0019826"(oxygen sensor activity)|go:"GO:0022008"(neurogenesis)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032981"(mitochondrial respiratory chain complex I assembly)|go:"GO:0042063"(gliogenesis)|go:"GO:0042775"(mitochondrial ATP synthesis coupled electron transport)|go:"GO:0046872"(metal ion binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051287"(NAD binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|go:"GO:0061351"(neural precursor cell proliferation)|go:"GO:0071453"(cellular response to oxygen levels)|interpro:IPR001135(NADH-ubiquinone oxidoreductase, chain 49kDa)|interpro:IPR014029(NADH-ubiquinone oxidoreductase, chain 49kDa, conserved site)|interpro:IPR022885|interpro:IPR029014|mint:Q91WD5|rcsb pdb:6G2J|rcsb pdb:6G72|rcsb pdb:6ZR2|rcsb pdb:6ZTQ|rcsb pdb:7AK5|rcsb pdb:7AK6|rcsb pdb:7B93|reactome:R-MMU-611105|reactome:R-MMU-6799198|entrezgene/locuslink:226646(identity) - - author-confidence:1.1225966987910085 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/11/29 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 rogid:dk8e26C1hIdTZvDnX5nE1n+juwk10090 intact-crc:4F19C580448A70B4|rigid:h5aZ5IRmi+iqz9RBGsYFUGeOoew false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:Q91YM4 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-8353709|intact:MINT-4121960|uniprotkb:Q6ZQ19|uniprotkb:Q8C6D1|uniprotkb:Q3TKZ4|uniprotkb:O89082|ensembl:ENSMUSP00000000394|ensembl:ENSMUSP00000114256|ensembl:ENSMUSP00000140835 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:fakd4_mouse(display_long)|uniprotkb:Tbrg4(gene name)|psi-mi:Tbrg4(display_short)|uniprotkb:Kiaa0948(gene name synonym)|uniprotkb:Transforming growth factor beta regulator 4(gene name synonym)|uniprotkb:Protein TBRG4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_001123929.1|refseq:NP_598772.1|refseq:XP_006514670.1|refseq:XP_006514671.1|ensembl:ENSMUSG00000000384(gene)|ensembl:ENSMUST00000000394(transcript)|ensembl:ENSMUST00000156969(transcript)|ensembl:ENSMUST00000189268(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0016071"(mRNA metabolic process)|go:"GO:0044528"(regulation of mitochondrial mRNA stability)|go:"GO:0090615"(mitochondrial mRNA processing)|interpro:IPR010622(FAST kinase leucine-rich)|interpro:IPR013579(FAST kinase-like protein, subdomain 2)|interpro:IPR013584(RAP domain)|interpro:IPR016024(Armadillo-type fold)|mint:Q91YM4|entrezgene/locuslink:21379(identity) - - comment:mint|function:May play a role in cell cycle progression|author-confidence:1.4635347962136234 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:in3JOCGu68ilWk/IHs5nqyhJwr010090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:Q921H8 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-8330006|intact:MINT-1858351|ensembl:ENSMUSP00000042351 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:thika_mouse(display_long)|uniprotkb:Acetyl-CoA C-myristoyltransferase(gene name synonym)|uniprotkb:Acaa1a(gene name)|psi-mi:Acaa1a(display_short)|uniprotkb:Acaa1(gene name synonym)|uniprotkb:Beta-ketothiolase A(gene name synonym)|uniprotkb:Acetyl-CoA acyltransferase A(gene name synonym)|uniprotkb:Peroxisomal 3-oxoacyl-CoA thiolase A(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_570934.1|refseq:XP_006511986.1|ensembl:ENSMUSG00000036138(gene)|ensembl:ENSMUST00000039784(transcript)|go:"GO:0000038"(very long-chain fatty acid metabolic process)|go:"GO:0003985"(acetyl-CoA C-acetyltransferase activity)|go:"GO:0003988"(acetyl-CoA C-acyltransferase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005777"(peroxisome)|go:"GO:0005782"(peroxisomal matrix)|go:"GO:0006631"(fatty acid metabolic process)|go:"GO:0006635"(fatty acid beta-oxidation)|go:"GO:0008206"(bile acid metabolic process)|go:"GO:0008775"(acetate CoA-transferase activity)|go:"GO:0010124"(phenylacetate catabolic process)|go:"GO:0016401"(palmitoyl-CoA oxidase activity)|go:"GO:0050633"(acetyl-CoA C-myristoyltransferase activity)|interpro:IPR002155(Thiolase)|interpro:IPR016039(Thiolase-like)|interpro:IPR020610|interpro:IPR020613|interpro:IPR020615|interpro:IPR020616|interpro:IPR020617|mint:Q921H8|reactome:R-MMU-2046106|reactome:R-MMU-390247|reactome:R-MMU-6798695|reactome:R-MMU-9033241|entrezgene/locuslink:113868(identity) - - comment:mint|author-confidence:7.026359334474553 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:A7f6/enaS9RJZ+DDXxVXXa/9vTU10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:Q62504 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-8399884|intact:MINT-4101967|uniprotkb:Q80TN9|uniprotkb:Q9QZW2|uniprotkb:Q99PS4 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:mint_mouse(display_long)|uniprotkb:Spen(gene name)|psi-mi:Spen(display_short)|uniprotkb:Kiaa0929(gene name synonym)|uniprotkb:Mint(gene name synonym)|uniprotkb:Sharp(gene name synonym)|uniprotkb:SPEN homolog(gene name synonym)|uniprotkb:SMART/HDAC1-associated repressor protein(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) interpro:IPR016194(Spen Paralogue and Orthologue C-terminal-like)|refseq:NP_062737.2|interpro:IPR034172|interpro:IPR034173|interpro:IPR034174|interpro:IPR034175|interpro:IPR035979|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|mint:Q62504|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0007219"(Notch signaling pathway)|go:"GO:0017053"(transcription repressor complex)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0050769"(positive regulation of neurogenesis)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|reactome:R-MMU-9013422|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR010912(Spen paralogue and orthologue C-terminal, metazoa)|interpro:IPR012921(Spen paralogue and orthologue C-terminal)|entrezgene/locuslink:56381(identity) - - comment:mint|function:Essential corepressor protein, which probably regulates different key pathways such as the Notch pathway. Negative regulator of the Notch pathway via its interaction with RBPSUH, which prevents the association between NOTCH1 and RBPSUH, and therefore suppresses the transactivation activity of Notch signaling. Blocks the differentiation of precursor B-cells into marginal zone B-cells. Probably represses transcription via the recruitment of large complexes containing histone deacetylase proteins. May bind both to DNA and RNA|author-confidence:12.822663993902385 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:rrMAxGMsDguPq4w+oVxrHB3LbVg10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:Q61024 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-8312094|ensembl:ENSMUSP00000031766|ensembl:ENSMUSP00000111204|uniprotkb:Q8BPC8|uniprotkb:Q3TJA1|intact:MINT-4088470 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:asns_mouse(display_long)|uniprotkb:Asns(gene name)|psi-mi:Asns(display_short)|uniprotkb:Glutamine-dependent asparagine synthetase(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) go:"GO:0045931"(positive regulation of mitotic cell cycle)|go:"GO:0070981"(L-asparagine biosynthetic process)|interpro:IPR001962(Asparagine synthase)|interpro:IPR006426(Asparagine synthase, glutamine-hydrolyzing)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR017932|interpro:IPR029055|interpro:IPR033738|mint:Q61024|reactome:R-MMU-8963693|go:"GO:0043200"(response to amino acid)|ensembl:ENSMUSG00000029752(gene)|ensembl:ENSMUST00000031766(transcript)|ensembl:ENSMUST00000115542(transcript)|go:"GO:0001889"(liver development)|go:"GO:0004066"("asparagine synthase (glutamine-hydrolyzing) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0006529"(asparagine biosynthetic process)|go:"GO:0006541"(glutamine metabolic process)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009612"(response to mechanical stimulus)|go:"GO:0009636"(response to toxic substance)|go:"GO:0031427"(response to methotrexate)|go:"GO:0032354"(response to follicle-stimulating hormone)|go:"GO:0032870"(cellular response to hormone stimulus)|go:"GO:0042149"(cellular response to glucose starvation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|refseq:NP_036185.1|refseq:XP_006505155.1|refseq:XP_006505156.1|entrezgene/locuslink:27053(identity) - - comment:mint|author-confidence:8.500961231232786 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:q6Z12JltPwDjiOVpLU2R88o5nAw10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:Q9CZ44 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-7961368|uniprotkb:Q8BYL3|uniprotkb:Q80Y15|intact:MINT-1869876|uniprotkb:A2AT03|ensembl:ENSMUSP00000028949 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:nsf1c_mouse(display_long)|uniprotkb:Nsfl1c(gene name)|psi-mi:Nsfl1c(display_short)|uniprotkb:p97 cofactor p47(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_938085.1|refseq:NP_001278003.1|ensembl:ENSMUSG00000027455(gene)|ensembl:ENSMUST00000028949(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000132"(establishment of mitotic spindle orientation)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0005795"(Golgi stack)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0007030"(Golgi organization)|go:"GO:0031468"(nuclear membrane reassembly)|go:"GO:0031616"(spindle pole centrosome)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0045111"(intermediate filament cytoskeleton)|go:"GO:0046604"(positive regulation of mitotic centrosome separation)|go:"GO:0051117"(ATPase binding)|go:"GO:0061025"(membrane fusion)|go:"GO:1904780"(negative regulation of protein localization to centrosome)|go:"GO:1990730"(VCP-NSFL1C complex)|interpro:IPR001012(UBX)|interpro:IPR009060(UBA-like)|interpro:IPR012989(SEP)|interpro:IPR029071|interpro:IPR036241|mint:Q9CZ44|reactome:R-MMU-9013407|entrezgene/locuslink:386649(identity) - - comment:mint|comment:homomint|function:"Reduces the ATPase activity of VCP. Necessary for the fragmentation of Golgi stacks during mitosis and for VCP-mediated reassembly of Golgi stacks after mitosis. May play a role in VCP-mediated formation of transitional endoplasmic reticulum (tER)"|author-confidence:1.7132585649540626 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:b61FAzDFIfQboD05Rm+7tvW2DQY10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:P06151 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-444940|ensembl:ENSMUSP00000036386|ensembl:ENSMUSP00000103267 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:ldha_mouse(display_long)|uniprotkb:LDH muscle subunit(gene name synonym)|uniprotkb:Ldha(gene name)|psi-mi:Ldha(display_short)|uniprotkb:Ldh-1(gene name synonym)|uniprotkb:Ldh1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_034829.1|ensembl:ENSMUSG00000063229(gene)|ensembl:ENSMUST00000005051(transcript)|ensembl:ENSMUST00000048209(transcript)|go:"GO:0004457"(lactate dehydrogenase activity)|go:"GO:0004459"(L-lactate dehydrogenase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0019244"(lactate biosynthetic process from pyruvate)|go:"GO:0019661"(glucose catabolic process to lactate via pyruvate)|go:"GO:0031668"(cellular response to extracellular stimulus)|go:"GO:0035686"(sperm fibrous sheath)|go:"GO:0042802"(identical protein binding)|interpro:IPR001236(Lactate/malate dehydrogenase)|interpro:IPR001557(L-lactate/malate dehydrogenase)|interpro:IPR011304(L-lactate dehydrogenase)|interpro:IPR015955(Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal)|interpro:IPR018177|interpro:IPR022383|interpro:IPR036291|mint:P06151|reactome:R-MMU-70268|entrezgene/locuslink:16828(identity) - - author-confidence:3.792445454366953 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:IErFuOIWq53/XyIxWgUyVi76VnM10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:O88342 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-6914976|ensembl:ENSMUSP00000005234 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:wdr1_mouse(display_long)|uniprotkb:Wdr1(gene name)|psi-mi:Wdr1(display_short)|uniprotkb:Actin-interacting protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) go:"GO:0045199"(maintenance of epithelial cell apical/basal polarity)|go:"GO:0045214"(sarcomere organization)|go:"GO:0048713"(regulation of oligodendrocyte differentiation)|go:"GO:0051015"(actin filament binding)|go:"GO:0060307"(regulation of ventricular cardiac muscle cell membrane repolarization)|go:"GO:1990266"(neutrophil migration)|interpro:IPR001680(WD40 repeat)|interpro:IPR011045(Nitrous oxide reductase, N-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|reactome:R-MMU-114608|ensembl:ENSMUSG00000005103(gene)|ensembl:ENSMUST00000005234(transcript)|go:"GO:0002102"(podosome)|go:"GO:0002446"(neutrophil mediated immunity)|go:"GO:0003779"(actin binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030042"(actin filament depolymerization)|go:"GO:0030043"(actin filament fragmentation)|go:"GO:0030054"(cell junction)|go:"GO:0030220"(platelet formation)|go:"GO:0030834"(regulation of actin filament depolymerization)|go:"GO:0030836"(positive regulation of actin filament depolymerization)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0030865"(cortical cytoskeleton organization)|go:"GO:0040011"(locomotion)|go:"GO:0042247"(establishment of planar polarity of follicular epithelium)|go:"GO:0042995"(cell projection)|go:"GO:0043209"(myelin sheath)|go:"GO:0043297"(apical junction assembly)|refseq:NP_035845.1|entrezgene/locuslink:22388(identity) - - author-confidence:2.2610800419121806 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:PVIlQDv8eXQrI3QBWJOjKlj/Zig10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:P52480 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-647785|uniprotkb:Q3TBV8|uniprotkb:Q3TBW5|uniprotkb:Q3TC59|uniprotkb:Q3U1X3|uniprotkb:Q3U5P6|uniprotkb:Q4VC20|uniprotkb:Q64484|uniprotkb:Q91YI8|uniprotkb:Q9CWB1|ensembl:ENSMUSP00000034834 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:kpym_mouse(display_long)|uniprotkb:Pkm(gene name)|psi-mi:Pkm(display_short)|uniprotkb:Pk3(gene name synonym)|uniprotkb:Pkm2(gene name synonym)|uniprotkb:Pykm(gene name synonym)|uniprotkb:Pyruvate kinase muscle isozyme(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_035229.2|refseq:XP_006510918.1|refseq:NP_001240812.1|refseq:XP_011240975.1|dip:DIP-40536N|ensembl:ENSMUSG00000032294(gene)|ensembl:ENSMUST00000034834(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0001889"(liver development)|go:"GO:0003729"(mRNA binding)|go:"GO:0004743"(pyruvate kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005791"(rough endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005929"(cilium)|go:"GO:0006006"(glucose metabolic process)|go:"GO:0006096"(glycolytic process)|go:"GO:0006754"(ATP biosynthetic process)|go:"GO:0012501"(programmed cell death)|go:"GO:0016301"(kinase activity)|go:"GO:0030955"(potassium ion binding)|go:"GO:0031100"(animal organ regeneration)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0042802"(identical protein binding)|go:"GO:0042866"(pyruvate biosynthetic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0043403"(skeletal muscle tissue regeneration)|go:"GO:0043531"(ADP binding)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070324"(thyroid hormone binding)|go:"GO:1902912"(pyruvate kinase complex)|go:"GO:1903672"(positive regulation of sprouting angiogenesis)|go:"GO:2000767"(positive regulation of cytoplasmic translation)|interpro:IPR001697(Pyruvate kinase)|interpro:IPR011037(Pyruvate kinase, beta-barrel-like)|interpro:IPR015793(Pyruvate kinase, barrel)|interpro:IPR015795(Pyruvate kinase, C-terminal-like)|interpro:IPR015806(Pyruvate kinase, beta-barrel)|interpro:IPR015813(Pyruvate/Phosphoenolpyruvate kinase, catalytic core)|interpro:IPR018209|interpro:IPR036918|interpro:IPR040442|mint:P52480|reactome:R-MMU-6798695|reactome:R-MMU-70171|entrezgene/locuslink:18746(identity) - - author-confidence:8.106651148925687 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:SWQx3aPATcnlExhyy8afjcrB+xo10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:Q3V3R1 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-912208|uniprotkb:Q3TVQ0|uniprotkb:Q3V402|uniprotkb:Q8CAL0|uniprotkb:Q8K2N5|uniprotkb:Q80V98|ensembl:ENSMUSP00000036178|ensembl:ENSMUSP00000112870|ensembl:ENSMUSP00000112897 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:c1tm_mouse(display_long)|uniprotkb:Formyltetrahydrofolate synthetase(gene name synonym)|uniprotkb:Mthfd1l(gene name)|psi-mi:Mthfd1l(display_short)|uniprotkb:Fthfsdc1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_001164256.1|refseq:NP_001164257.1|refseq:NP_758512.3|ensembl:ENSMUSG00000040675(gene)|ensembl:ENSMUST00000043735(transcript)|ensembl:ENSMUST00000117291(transcript)|ensembl:ENSMUST00000120585(transcript)|go:"GO:0001843"(neural tube closure)|go:"GO:0004329"(formate-tetrahydrofolate ligase activity)|go:"GO:0004488"("methylenetetrahydrofolate dehydrogenase (NADP+) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006760"(folic acid-containing compound metabolic process)|go:"GO:0009257"(10-formyltetrahydrofolate biosynthetic process)|go:"GO:0015942"(formate metabolic process)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048702"(embryonic neurocranium morphogenesis)|go:"GO:0048703"(embryonic viscerocranium morphogenesis)|interpro:IPR000559(Formate-tetrahydrofolate ligase, FTHFS)|interpro:IPR000672(Tetrahydrofolate dehydrogenase/cyclohydrolase)|interpro:IPR020628|interpro:IPR020630|interpro:IPR020631|interpro:IPR027417|interpro:IPR036291|mint:Q3V3R1|rcsb pdb:2EO2|reactome:R-MMU-196757|entrezgene/locuslink:270685(identity) - - author-confidence:3.601270217539926 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:Hh58kyg8+iN4T2flIZSrUkUf1MI10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:P60670 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-10817650|uniprotkb:B1ATY4|uniprotkb:B1ATY5|ensembl:ENSMUSP00000035851 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:npl4_mouse(display_long)|uniprotkb:Nploc4(gene name)|psi-mi:Nploc4(display_short)|uniprotkb:Kiaa1499(gene name synonym)|uniprotkb:Npl4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_001181952.1|refseq:NP_955763.1|ensembl:ENSMUSG00000039703(gene)|ensembl:ENSMUST00000044271(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007030"(Golgi organization)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032480"(negative regulation of type I interferon production)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0036501"(UFD1-NPL4 complex)|go:"GO:0039536"(negative regulation of RIG-I signaling pathway)|go:"GO:0042175"(nuclear outer membrane-endoplasmic reticulum membrane network)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0051117"(ATPase binding)|interpro:IPR001876(Zinc finger, RanBP2-type)|interpro:IPR007716(NPL4, zinc-binding putative)|interpro:IPR007717(NPL4)|interpro:IPR016563(Polyubiquitin-tagged protein recognition complex, Npl4 component)|interpro:IPR024682|interpro:IPR029071|interpro:IPR036443|interpro:IPR037518|rcsb pdb:2PJH|reactome:R-MMU-110320|entrezgene/locuslink:217365(identity) - - author-confidence:1.1495504436657809 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:fqIjvWF0u+4tteXKbd+grVH2L5010090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:P62141 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-352338|uniprotkb:P37140|uniprotkb:Q3TBE5|uniprotkb:Q3TL90|uniprotkb:Q542E7|uniprotkb:Q8C285|uniprotkb:Q9DBY2|ensembl:ENSMUSP00000015100|ensembl:ENSMUSP00000144047 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:pp1b_mouse(display_long)|uniprotkb:Ppp1cb(gene name)|psi-mi:Ppp1cb(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_766295.2|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0007049"(cell cycle)|go:"GO:0016791"(phosphatase activity)|go:"GO:0017018"(myosin phosphatase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030155"(regulation of cell adhesion)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0042587"(glycogen granule)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0043153"(entrainment of circadian clock by photoperiod)|go:"GO:0046872"(metal ion binding)|go:"GO:0050115"(myosin-light-chain-phosphatase activity)|go:"GO:0051301"(cell division)|go:"GO:0072357"(PTW/PP1 phosphatase complex)|go:"GO:0106306"|go:"GO:0106307"|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|interpro:IPR031675|mint:P62141|reactome:R-MMU-2565942|reactome:R-MMU-5625740|reactome:R-MMU-5627123|reactome:R-MMU-5673000|ensembl:ENSMUSG00000014956(gene)|ensembl:ENSMUST00000015100(transcript)|ensembl:ENSMUST00000201360(transcript)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0004721"(phosphoprotein phosphatase activity)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005977"(glycogen metabolic process)|go:"GO:0005979"(regulation of glycogen biosynthetic process)|go:"GO:0005981"(regulation of glycogen catabolic process)|entrezgene/locuslink:19046(identity) - - author-confidence:2.626115858262572 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:VtNJVyimeiEuRDDWtGswTqoSOH810090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:O35737 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-299747|ensembl:ENSMUSP00000070503|ensembl:ENSMUSP00000104770 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:hnrh1_mouse(display_long)|uniprotkb:Hnrnph1(gene name)|psi-mi:Hnrnph1(display_short)|uniprotkb:Hnrph(gene name synonym)|uniprotkb:Hnrph1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) ensembl:ENSMUSG00000007850(gene)|ensembl:ENSMUST00000069304(transcript)|ensembl:ENSMUST00000109142(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|go:"GO:0042802"(identical protein binding)|go:"GO:0043484"(regulation of RNA splicing)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0098761"(cellular response to interleukin-7)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012996(Zinc finger, CHHC-type)|interpro:IPR035979|mint:O35737|reactome:R-MMU-6803529|reactome:R-MMU-72163|reactome:R-MMU-72203|refseq:NP_067485.1|refseq:XP_017170179.1|refseq:XP_017170180.1|entrezgene/locuslink:59013(identity) - - author-confidence:3.445438301806972 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:nBSCiXDDfkwqslFAXPXlDzC+5e410090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:P14206 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-1183792|ensembl:ENSMUSP00000035105|ensembl:ENSMUSP00000148933|uniprotkb:Q58E74|uniprotkb:Q8BHL0|uniprotkb:Q8BNL2|uniprotkb:Q91V31|uniprotkb:Q9CY13 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:rssa_mouse(display_long)|uniprotkb:Rpsa(gene name)|psi-mi:Rpsa(display_short)|uniprotkb:Lamr1(gene name synonym)|uniprotkb:Laminin receptor 1(gene name synonym)|uniprotkb:37/67 kDa laminin receptor(gene name synonym)|uniprotkb:Laminin-binding protein precursor p40(gene name synonym)|uniprotkb:37 kDa oncofetal antigen(gene name synonym)|uniprotkb:OFA/iLRP(gene name synonym)|uniprotkb:P40-8(gene name synonym)|uniprotkb:37 kDa laminin receptor precursor(gene name synonym)|uniprotkb:67 kDa laminin receptor(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) ensembl:ENSMUSG00000032518(gene)|refseq:NP_035159.3|ensembl:ENSMUST00000035105(transcript)|ensembl:ENSMUST00000217317(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005055"(laminin receptor activity)|go:"GO:0005604"(basement membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006412"(translation)|go:"GO:0015935"(small ribosomal subunit)|go:"GO:0016020"(membrane)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0030855"(epithelial cell differentiation)|go:"GO:0043022"(ribosome binding)|interpro:IPR005707(Ribosomal protein S2, eukaryotic/archaeal)|interpro:IPR018130|interpro:IPR023591|interpro:IPR027498|interpro:IPR027504|interpro:IPR032281|mint:P14206|reactome:R-MMU-156827|go:"GO:0043025"(neuronal cell body)|reactome:R-MMU-1799339|reactome:R-MMU-6791226|reactome:R-MMU-72649|reactome:R-MMU-72689|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-975956|reactome:R-MMU-975957|go:"GO:0043236"(laminin binding)|go:"GO:0045202"(synapse)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0098609"(cell-cell adhesion)|go:"GO:0098978"(glutamatergic synapse)|interpro:IPR001865(Ribosomal protein S2)|dip:DIP-38089N|entrezgene/locuslink:16785(identity) - - author-confidence:3.603947741865235 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:Qf5VO9t+mZnGd/vuxHsQyYBuYSQ10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:P26443 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-773329|uniprotkb:Q8C273|ensembl:ENSMUSP00000022322 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:dhe3_mouse(display_long)|uniprotkb:Glud1(gene name)|psi-mi:Glud1(display_short)|uniprotkb:Glud(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_032159.1|ensembl:ENSMUSG00000021794(gene)|ensembl:ENSMUST00000022322(transcript)|go:"GO:0004352"("glutamate dehydrogenase (NAD+) activity")|go:"GO:0004353"("glutamate dehydrogenase [NAD(P)+] activity")|go:"GO:0004354"("glutamate dehydrogenase (NADP+) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006537"(glutamate biosynthetic process)|go:"GO:0006538"(glutamate catabolic process)|go:"GO:0006541"(glutamine metabolic process)|go:"GO:0007616"(long-term memory)|go:"GO:0010044"(response to aluminum ion)|go:"GO:0019899"(enzyme binding)|go:"GO:0021549"(cerebellum development)|go:"GO:0032024"(positive regulation of insulin secretion)|go:"GO:0043531"(ADP binding)|go:"GO:0070403"(NAD+ binding)|go:"GO:0070728"(leucine binding)|go:"GO:0072350"(tricarboxylic acid metabolic process)|interpro:IPR006095(Glutamate/phenylalanine/leucine/valine dehydrogenase)|interpro:IPR006096(Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal)|interpro:IPR006097(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region)|interpro:IPR033524|interpro:IPR033922|interpro:IPR036291|mint:P26443|reactome:R-MMU-2151201|reactome:R-MMU-8964539|entrezgene/locuslink:14661(identity) - - author-confidence:1.2316611896419078 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:HbPeUm/tpMD6GrgM/863swTQqGA10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:Q8C147 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-11566633|uniprotkb:Q9DBQ2|uniprotkb:Q6PIS0|uniprotkb:Q7TMQ5|uniprotkb:Q6KAM7|uniprotkb:Q8CAP6|uniprotkb:Q8K105|ensembl:ENSMUSP00000025831 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:dock8_mouse(display_long)|uniprotkb:Dock8(gene name)|psi-mi:Dock8(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_083061.2|ensembl:ENSMUSG00000052085(gene)|ensembl:ENSMUST00000025831(transcript)|go:"GO:0001771"(immunological synapse formation)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0031252"(cell leading edge)|go:"GO:0031256"(leading edge membrane)|go:"GO:0031258"(lamellipodium membrane)|go:"GO:0036336"(dendritic cell migration)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0061485"(memory T cell proliferation)|go:"GO:0070233"(negative regulation of T cell apoptotic process)|go:"GO:1903905"(positive regulation of establishment of T cell polarity)|go:"GO:1990869"(cellular response to chemokine)|go:"GO:2000406"(positive regulation of T cell migration)|interpro:IPR010703(Dedicator of cytokinesis)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021816|interpro:IPR026791|interpro:IPR027007|interpro:IPR027357|interpro:IPR035892|interpro:IPR037808|interpro:IPR043161|interpro:IPR043162|rcsb pdb:3VHL|rcsb pdb:7CLX|rcsb pdb:7CLY|reactome:R-MMU-9013148|reactome:R-MMU-9013149|reactome:R-MMU-9013409|reactome:R-MMU-983231|entrezgene/locuslink:76088(identity) - - author-confidence:5.5033834982390815 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:xAjdT7y7XRy54NjvlQ6tt8Rm9ko10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:P47738 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-2308120|ensembl:ENSMUSP00000031411 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:aldh2_mouse(display_long)|uniprotkb:Aldh2(gene name)|psi-mi:Aldh2(display_short)|uniprotkb:Ahd-1(gene name synonym)|uniprotkb:Ahd1(gene name synonym)|uniprotkb:ALDH class 2(gene name synonym)|uniprotkb:AHD-M1(gene name synonym)|uniprotkb:ALDHI(gene name synonym)|uniprotkb:ALDH-E2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_033786.1|ensembl:ENSMUSG00000029455(gene)|ensembl:ENSMUST00000031411(transcript)|go:"GO:0004029"("aldehyde dehydrogenase (NAD+) activity")|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006068"(ethanol catabolic process)|go:"GO:0006117"(acetaldehyde metabolic process)|go:"GO:0008631"(intrinsic apoptotic signaling pathway in response to oxidative stress)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043878"("glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity")|go:"GO:0048149"(behavioral response to ethanol)|go:"GO:0050727"(regulation of inflammatory response)|go:"GO:0051287"(NAD binding)|go:"GO:0070404"(NADH binding)|go:"GO:0110095"(cellular detoxification of aldehyde)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016160(Aldehyde dehydrogenase, conserved site)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR029510|mint:P47738|reactome:R-MMU-380612|reactome:R-MMU-71384|entrezgene/locuslink:11669(identity) - - author-confidence:1.6266852784357544 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:C4L2qigIlQeaZH4RsNocJovkPMw10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:P07901 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-78930|ensembl:ENSMUSP00000021698|ensembl:ENSMUSP00000091921 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:hs90a_mouse(display_long)|uniprotkb:Hsp90aa1(gene name)|psi-mi:Hsp90aa1(display_short)|uniprotkb:Hsp86(gene name synonym)|uniprotkb:Hsp86-1(gene name synonym)|uniprotkb:Hspca(gene name synonym)|uniprotkb:Heat shock 86 kDa(gene name synonym)|uniprotkb:Tumor-specific transplantation 86 kDa antigen(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_034610.1|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045585"(positive regulation of cytotoxic T cell differentiation)|go:"GO:0045793"(positive regulation of cell size)|go:"GO:0046677"(response to antibiotic)|go:"GO:0048156"(tau protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048675"(axon extension)|go:"GO:0050821"(protein stabilization)|go:"GO:0051020"(GTPase binding)|go:"GO:0051022"(Rho GDP-dissociation inhibitor binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070182"(DNA polymerase binding)|go:"GO:0097110"(scaffold protein binding)|go:"GO:0097226"(sperm mitochondrial sheath)|go:"GO:0097524"(sperm plasma membrane)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0098586"(cellular response to virus)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902949"(positive regulation of tau-protein kinase activity)|go:"GO:1903364"(positive regulation of cellular protein catabolic process)|go:"GO:1903827"|go:"GO:1905323"(telomerase holoenzyme complex assembly)|go:"GO:1990782"(protein tyrosine kinase binding)|interpro:IPR001404(Heat shock protein Hsp90)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR019805|interpro:IPR020568|interpro:IPR020575|interpro:IPR036890|interpro:IPR037196|mint:P07901|rcsb pdb:5H22|reactome:R-MMU-1227986|reactome:R-MMU-1474151|reactome:R-MMU-168928|reactome:R-MMU-2029482|reactome:R-MMU-203615|reactome:R-MMU-2565942|reactome:R-MMU-3371497|reactome:R-MMU-3371511|reactome:R-MMU-3371568|reactome:R-MMU-3371571|reactome:R-MMU-380259|reactome:R-MMU-380270|reactome:R-MMU-380284|reactome:R-MMU-380320|reactome:R-MMU-399954|reactome:R-MMU-4420097|reactome:R-MMU-5218920|reactome:R-MMU-5620912|reactome:R-MMU-5675482|reactome:R-MMU-6798695|reactome:R-MMU-8852276|reactome:R-MMU-8854518|reactome:R-MMU-8863795|reactome:R-MMU-8939211|reactome:R-MMU-9009391|reactome:R-MMU-9013418|reactome:R-MMU-9018519|reactome:R-MMU-9652282|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031526"(brush border membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032273"(positive regulation of protein polymerization)|go:"GO:0032564"(dATP binding)|go:"GO:0032728"(positive regulation of interferon-beta production)|ensembl:ENSMUSG00000021270(gene)|ensembl:ENSMUST00000021698(transcript)|ensembl:ENSMUST00000094361(transcript)|go:"GO:0001764"(neuron migration)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0002134"(UTP binding)|go:"GO:0002135"(CTP binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0002230"(positive regulation of defense response to virus by host)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006809"(nitric oxide biosynthetic process)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0007004"(telomere maintenance via telomerase)|go:"GO:0009408"(response to heat)|go:"GO:0009409"(response to cold)|go:"GO:0009986"(cell surface)|go:"GO:0010592"(positive regulation of lamellipodium assembly)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017098"(sulfonylurea receptor binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0021955"(central nervous system neuron axonogenesis)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030235"(nitric-oxide synthase regulator activity)|go:"GO:0030911"(TPR domain binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034605"(cellular response to heat)|go:"GO:0036126"(sperm flagellum)|go:"GO:0042026"(protein refolding)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0042470"(melanosome)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043209"(myelin sheath)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0044294"(dendritic growth cone)|go:"GO:0044295"(axonal growth cone)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045040"(protein insertion into mitochondrial outer membrane)|dip:DIP-30975N|entrezgene/locuslink:15519(identity) - - author-confidence:1.2857471810131396 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:t9XAeXdXezYOtJX0wp3IY9/ZMkQ10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:G3X925 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-11566171|ensembl:ENSMUSP00000035417 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:g3x925_mouse(display_long)|uniprotkb:Pklr(gene name)|psi-mi:Pklr(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_038659.2|ensembl:ENSMUSG00000041237(gene)|ensembl:ENSMUST00000047111(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0001666"(response to hypoxia)|go:"GO:0004743"(pyruvate kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0006754"(ATP biosynthetic process)|go:"GO:0007584"(response to nutrient)|go:"GO:0009408"(response to heat)|go:"GO:0010226"(response to lithium ion)|go:"GO:0009749"(response to glucose)|go:"GO:0016301"(kinase activity)|go:"GO:0030955"(potassium ion binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0033198"(response to ATP)|go:"GO:0042866"(pyruvate biosynthetic process)|go:"GO:0051591"(response to cAMP)|go:"GO:0071872"(cellular response to epinephrine stimulus)|interpro:IPR001697(Pyruvate kinase)|interpro:IPR011037(Pyruvate kinase, beta-barrel-like)|interpro:IPR015793(Pyruvate kinase, barrel)|interpro:IPR015795(Pyruvate kinase, C-terminal-like)|interpro:IPR015806(Pyruvate kinase, beta-barrel)|interpro:IPR015813(Pyruvate/Phosphoenolpyruvate kinase, catalytic core)|interpro:IPR018209|interpro:IPR036918|interpro:IPR040442|entrezgene/locuslink:18770(identity) - - author-confidence:1.5426110146210679 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:qi3BeyJ0L2S50HjacF4Z0ryFUig10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:Q62384 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-11566629|ensembl:ENSMUSP00000117725 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:zpr1_mouse(display_long)|uniprotkb:Zfp259(gene name synonym)|uniprotkb:Zinc finger protein 259(gene name synonym)|uniprotkb:Znf259(gene name synonym)|uniprotkb:Zpr1(gene name)|psi-mi:Zpr1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_035882.1|ensembl:ENSMUSG00000032078(gene)|ensembl:ENSMUST00000156440(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0001833"(inner cell mass cell proliferation)|go:"GO:0001834"(trophectodermal cell proliferation)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006397"(mRNA processing)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008283"(cell population proliferation)|go:"GO:0008380"(RNA splicing)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0015030"(Cajal body)|go:"GO:0021510"(spinal cord development)|go:"GO:0030424"(axon)|go:"GO:0030426"(growth cone)|go:"GO:0030576"(Cajal body organization)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0031641"(regulation of myelination)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0042023"(DNA endoreduplication)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043204"(perikaryon)|go:"GO:0045927"(positive regulation of growth)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0061564"(axon development)|go:"GO:0071364"(cellular response to epidermal growth factor stimulus)|go:"GO:0071931"(positive regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0097504"(Gemini of coiled bodies)|go:"GO:1902742"(apoptotic process involved in development)|go:"GO:1990261"(pre-mRNA catabolic process)|go:"GO:2000672"(negative regulation of motor neuron apoptotic process)|interpro:IPR004457(Zinc finger, ZPR1-type)|interpro:IPR040141|interpro:IPR042451|interpro:IPR042452|rcsb pdb:2QKD|dip:DIP-46465N|entrezgene/locuslink:22687(identity) - - author-confidence:1.3375126513024371 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:jeflVhdrQB7TsdkWMRpnmtqTgiA10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:P58252 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-773856|uniprotkb:Q544E4|ensembl:ENSMUSP00000046101 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:ef2_mouse(display_long)|uniprotkb:Eef2(gene name)|psi-mi:Eef2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_031933.1|ensembl:ENSMUSG00000034994(gene)|ensembl:ENSMUST00000047864(transcript)|go:"GO:0002039"(p53 binding)|go:"GO:0002244"(hematopoietic progenitor cell differentiation)|go:"GO:0002931"(response to ischemia)|go:"GO:0003009"(skeletal muscle contraction)|go:"GO:0003723"(RNA binding)|go:"GO:0003746"(translation elongation factor activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005844"(polysome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006414"(translational elongation)|go:"GO:0007568"(aging)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0014009"(glial cell proliferation)|go:"GO:0016235"(aggresome)|go:"GO:0019901"(protein kinase binding)|go:"GO:0032355"(response to estradiol)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035914"(skeletal muscle cell differentiation)|go:"GO:0042493"|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0043022"(ribosome binding)|go:"GO:0045121"(membrane raft)|go:"GO:0045202"(synapse)|go:"GO:0045471"(response to ethanol)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0051015"(actin filament binding)|go:"GO:0051593"(response to folic acid)|go:"GO:1990416"(cellular response to brain-derived neurotrophic factor stimulus)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000767"(positive regulation of cytoplasmic translation)|interpro:IPR000640(Translation elongation factor EFG/EF2, C-terminal)|interpro:IPR000795(Protein synthesis factor, GTP-binding)|interpro:IPR004161(Translation elongation factor EFTu/EF1A, domain 2)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR005517(Translation elongation factor EFG/EF2, domain IV)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR020568|interpro:IPR027417|interpro:IPR031157|interpro:IPR035647|interpro:IPR041095|mint:P58252|reactome:R-MMU-156902|reactome:R-MMU-5358493|reactome:R-MMU-6798695|entrezgene/locuslink:13629(identity) - - author-confidence:16.305766137885364 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:910/vo3IRjcncyPD4f43dPtS83o10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:Q9CR27 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-11566651|uniprotkb:Q8K2X5|uniprotkb:Q9D0Y7|ensembl:ENSMUSP00000020248 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:wasc3_mouse(display_long)|uniprotkb:Washc3(gene name)|psi-mi:Washc3(display_short)|uniprotkb:Ccdc53(gene name synonym)|uniprotkb:Coiled-coil domain-containing protein 53(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_001116432.1|refseq:NP_080346.1|refseq:NP_081763.1|ensembl:ENSMUSG00000020056(gene)|ensembl:ENSMUST00000020248(transcript)|go:"GO:0005769"(early endosome)|go:"GO:0006887"(exocytosis)|go:"GO:0015031"(protein transport)|go:"GO:0030041"(actin filament polymerization)|go:"GO:0071203"(WASH complex)|interpro:IPR019309|mint:Q9CR27|entrezgene/locuslink:67282(identity) - - author-confidence:1.7537784330770645 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:TIHhOD17V73KUaS7OofYZCe5z0k10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:P70333 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-4282223|ensembl:ENSMUSP00000050838|ensembl:ENSMUSP00000074483|ensembl:ENSMUSP00000108827|ensembl:ENSMUSP00000108828|ensembl:ENSMUSP00000108829|uniprotkb:Q3THV9 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:hnrh2_mouse(display_long)|uniprotkb:Hnrnph2(gene name)|psi-mi:Hnrnph2(display_short)|uniprotkb:Hnrph2(gene name synonym)|uniprotkb:Heterogeneous nuclear ribonucleoprotein H'(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_001300645.1|refseq:NP_001300646.1|uniprotkb:A2BDV8(uniprot-removed-ac)|ensembl:ENSMUST00000074950(transcript)|ensembl:ENSMUST00000113202(transcript)|ensembl:ENSMUST00000113203(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0014069"(postsynaptic density)|go:"GO:0043484"(regulation of RNA splicing)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012996(Zinc finger, CHHC-type)|interpro:IPR035979|mint:P70333|reactome:R-MMU-72163|reactome:R-MMU-72203|ensembl:ENSMUST00000059297(transcript)|ensembl:ENSMUSG00000045427(gene)|ensembl:ENSMUST00000050331(transcript)|refseq:NP_063921.1|entrezgene/locuslink:56258(identity) - - author-confidence:8.686602917787507 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:BKLnU/p+g6hd6joRgjXU+BO5i7o10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:A2A9M5 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-11566645|ensembl:ENSMUSP00000030286 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:a2a9m5_mouse(display_long)|uniprotkb:Dock7(gene name)|psi-mi:Dock7(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_001277565.1|ensembl:ENSMUSG00000028556(gene)|ensembl:ENSMUST00000030286(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|interpro:IPR035892|interpro:IPR037808|interpro:IPR043161|interpro:IPR043162|go:"GO:0007264"(small GTPase mediated signal transduction)|interpro:IPR010703(Dedicator of cytokinesis)|interpro:IPR021816|interpro:IPR026791|interpro:IPR027007|interpro:IPR027357|entrezgene/locuslink:67299(identity) - - author-confidence:4.455400477313336 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:CgSJgOizdJ+BnXU1KgXekQUqrpw10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:Q04207 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-644400|uniprotkb:Q62025|ensembl:ENSMUSP00000025867 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:tf65_mouse(display_long)|uniprotkb:Nuclear factor NF-kappa-B p65 subunit(gene name synonym)|uniprotkb:Rela(gene name)|psi-mi:Rela(display_short)|uniprotkb:Nfkb3(gene name synonym)|uniprotkb:Nuclear factor of kappa light polypeptide gene enhancer in B-cells 3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_033071.1|reactome:R-MMU-2871837|reactome:R-MMU-3134963|reactome:R-MMU-3214841|reactome:R-MMU-445989|reactome:R-MMU-448706|reactome:R-MMU-4755510|reactome:R-MMU-5607764|reactome:R-MMU-5621575|reactome:R-MMU-9020702|reactome:R-MMU-933542|rcsb pdb:2RAM|rcsb pdb:5U01|rcsb pdb:6GGR|reactome:R-MMU-1169091|reactome:R-MMU-1810476|reactome:R-MMU-193692|reactome:R-MMU-202424|reactome:R-MMU-209560|ensembl:ENSMUSG00000024927(gene)|ensembl:ENSMUST00000025867(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000979"(RNA polymerase II core promoter sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001223"(transcription coactivator binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001889"(liver development)|go:"GO:0001942"(hair follicle development)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006117"(acetaldehyde metabolic process)|go:"GO:0006325"(chromatin organization)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006952"(defense response)|go:"GO:0006954"(inflammatory response)|go:"GO:0007249"(I-kappaB kinase/NF-kappaB signaling)|go:"GO:0007568"(aging)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0009617"(response to bacterium)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0010033"(response to organic substance)|go:"GO:0010224"(response to UV-B)|go:"GO:0014040"(positive regulation of Schwann cell differentiation)|go:"GO:0019221"(cytokine-mediated signaling pathway)|go:"GO:0019899"(enzyme binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032332"(positive regulation of chondrocyte differentiation)|go:"GO:0032495"(response to muramyl dipeptide)|go:"GO:0032570"(response to progesterone)|go:"GO:0032735"(positive regulation of interleukin-12 production)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0032868"(response to insulin)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0033234"(negative regulation of protein sumoylation)|go:"GO:0033590"(response to cobalamin)|go:"GO:0034097"(response to cytokine)|go:"GO:0035525"(NF-kappaB p50/p65 complex)|go:"GO:0035729"(cellular response to hepatocyte growth factor stimulus)|go:"GO:0035924"(cellular response to vascular endothelial growth factor stimulus)|go:"GO:0035994"(response to muscle stretch)|go:"GO:0038061"(NIK/NF-kappaB signaling)|go:"GO:0042177"(negative regulation of protein catabolic process)|go:"GO:0042277"(peptide binding)|go:"GO:0042301"(phosphate ion binding)|go:"GO:0042493"|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042805"(actinin binding)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043200"(response to amino acid)|go:"GO:0043278"(response to morphine)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046627"(negative regulation of insulin receptor signaling pathway)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0050727"(regulation of inflammatory response)|go:"GO:0050862"(positive regulation of T cell receptor signaling pathway)|go:"GO:0051059"(NF-kappaB binding)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0051591"(response to cAMP)|go:"GO:0070301"(cellular response to hydrogen peroxide)|go:"GO:0070431"(nucleotide-binding oligomerization domain containing 2 signaling pathway)|go:"GO:0070498"(interleukin-1-mediated signaling pathway)|go:"GO:0043620"(regulation of DNA-templated transcription in response to stress)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045087"(innate immune response)|go:"GO:0045202"(synapse)|go:"GO:0070555"(response to interleukin-1)|go:"GO:0071159"(NF-kappaB complex)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071223"(cellular response to lipoteichoic acid)|go:"GO:0071224"(cellular response to peptidoglycan)|go:"GO:0071316"(cellular response to nicotine)|go:"GO:0071347"(cellular response to interleukin-1)|go:"GO:0071354"(cellular response to interleukin-6)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071532"(ankyrin repeat binding)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099527"(postsynapse to nucleus signaling pathway)|go:"GO:0140296"(general transcription initiation factor binding)|go:"GO:0140297"(DNA-binding transcription factor binding)|go:"GO:1901222"(regulation of NIK/NF-kappaB signaling)|go:"GO:1901223"(negative regulation of NIK/NF-kappaB signaling)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1901522"(positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus)|go:"GO:1902004"(positive regulation of amyloid-beta formation)|go:"GO:1902894"(negative regulation of miRNA transcription)|go:"GO:1902895"(positive regulation of miRNA transcription)|go:"GO:1904385"(cellular response to angiotensin)|go:"GO:1904996"(positive regulation of leukocyte adhesion to vascular endothelial cell)|go:"GO:2000630"(positive regulation of miRNA metabolic process)|go:"GO:2001237"(negative regulation of extrinsic apoptotic signaling pathway)|interpro:IPR000451(NF-kappa-B/Rel/dorsal)|interpro:IPR002909(Cell surface receptor IPT/TIG)|interpro:IPR008967(p53-like transcription factor, DNA-binding)|interpro:IPR011539(Rel homology)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR030492|interpro:IPR030495|interpro:IPR032397|interpro:IPR033926|mint:Q04207|rcsb pdb:1BFT|rcsb pdb:1IKN|rcsb pdb:1K3Z|rcsb pdb:1LE5|rcsb pdb:1LE9|rcsb pdb:1LEI|rcsb pdb:1MY5|rcsb pdb:1MY7|rcsb pdb:1OY3|rcsb pdb:1RAM|interpro:IPR037059|rcsb pdb:1VKX|rcsb pdb:2I9T|rcsb pdb:2LWW|dip:DIP-6219N|entrezgene/locuslink:19697(identity) - - author-confidence:16.85876416187241 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:poiJSPJwXK2Om5pfk8z5HwFgK1o10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:P40142 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-494230|uniprotkb:Q3U7Y1|uniprotkb:Q3UK62|uniprotkb:Q545A1|uniprotkb:Q9ESA0|ensembl:ENSMUSP00000022529 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:tkt_mouse(display_long)|uniprotkb:P68(gene name synonym)|uniprotkb:Tkt(gene name)|psi-mi:Tkt(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_033414.1|ensembl:ENSMUSG00000021957(gene)|ensembl:ENSMUST00000022529(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004802"(transketolase activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005777"(peroxisome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006098"(pentose-phosphate shunt)|go:"GO:0009052"(pentose-phosphate shunt, non-oxidative branch)|go:"GO:0016604"(nuclear body)|go:"GO:0030246"(carbohydrate binding)|go:"GO:0030976"(thiamine pyrophosphate binding)|go:"GO:0040008"(regulation of growth)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043209"(myelin sheath)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046166"(glyceraldehyde-3-phosphate biosynthetic process)|go:"GO:0046390"(ribose phosphate biosynthetic process)|go:"GO:0048029"(monosaccharide binding)|interpro:IPR005474(Transketolase, N-terminal)|interpro:IPR005475(Transketolase, central region)|interpro:IPR009014(Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II)|interpro:IPR020826|interpro:IPR029061|interpro:IPR033248|mint:P40142|reactome:R-MMU-163754|reactome:R-MMU-71336|entrezgene/locuslink:21881(identity) - - author-confidence:2.324805120854523 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:h2YT3KKVrgDmPcSbJmtevBv1CAI10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:P38647 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-772469|uniprotkb:Q9CQ05|intact:EBI-4282065|uniprotkb:Q3TW93|uniprotkb:Q3UVN1|uniprotkb:Q3V015|intact:EBI-1635058|uniprotkb:Q7TSZ0|ensembl:ENSMUSP00000025217 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:grp75_mouse(display_long)|uniprotkb:75 kDa glucose-regulated protein(gene name synonym)|uniprotkb:p66 MOT(gene name synonym)|uniprotkb:Heat shock 70 kDa protein 9(gene name synonym)|uniprotkb:Peptide-binding protein 74(gene name synonym)|uniprotkb:Mortalin(gene name synonym)|uniprotkb:Hspa9(gene name)|psi-mi:Hspa9(display_short)|uniprotkb:Grp75(gene name synonym)|uniprotkb:Hsp74(gene name synonym)|uniprotkb:Hspa9a(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_034611.2|ensembl:ENSMUSG00000024359(gene)|ensembl:ENSMUST00000025217(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006611"(protein export from nucleus)|go:"GO:0016226"(iron-sulfur cluster assembly)|go:"GO:0017134"(fibroblast growth factor binding)|go:"GO:0019899"(enzyme binding)|go:"GO:0030218"(erythrocyte differentiation)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0034620"(cellular response to unfolded protein)|go:"GO:0042026"(protein refolding)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0043209"(myelin sheath)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0045646"(regulation of erythrocyte differentiation)|go:"GO:0045647"(negative regulation of erythrocyte differentiation)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051085"(chaperone cofactor-dependent protein refolding)|go:"GO:0051087"(chaperone binding)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:1902037"(negative regulation of hematopoietic stem cell differentiation)|go:"GO:1903707"(negative regulation of hemopoiesis)|interpro:IPR012725(Chaperone DnaK)|interpro:IPR013126(Heat shock protein 70)|interpro:IPR018181|interpro:IPR029047|interpro:IPR029048|interpro:IPR043129|mint:P38647|reactome:R-MMU-3371453|entrezgene/locuslink:15526(identity) - - author-confidence:8.526843966377434 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:HyohIe5BGD5mW3UO0OekqUKOhbU10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35282 uniprotkb:P97855 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-6666067|ensembl:ENSMUSP00000018727 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:g3bp1_mouse(display_long)|uniprotkb:G3bp1(gene name)|psi-mi:G3bp1(display_short)|uniprotkb:G3bp(gene name synonym)|uniprotkb:ATP-dependent DNA helicase VIII(gene name synonym)|uniprotkb:GAP SH3 domain-binding protein 1(gene name synonym)|uniprotkb:HDH-VIII(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566657|imex:IM-24977-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) ensembl:ENSMUSG00000018583(gene)|ensembl:ENSMUST00000018727(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032481"(positive regulation of type I interferon production)|go:"GO:0033677"(DNA/RNA helicase activity)|go:"GO:0034063"(stress granule assembly)|go:"GO:0043204"(perikaryon)|go:"GO:0045087"(innate immune response)|go:"GO:0051607"(defense response to virus)|go:"GO:0062029"(positive regulation of stress granule assembly)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002075(Nuclear transport factor 2)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR018222|interpro:IPR032710|interpro:IPR034374|interpro:IPR034375|interpro:IPR035979|interpro:IPR039539|mint:P97855|refseq:NP_038744.1|entrezgene/locuslink:27041(identity) - - author-confidence:8.136103916504082 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:Xxq1G7S8hxbGPvterifIOxpri6U10090 intact-crc:F9669F27EF19238D|rigid:Gkt1oGYX+tfOddfTdiRGG3pZsG4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q8VDU0 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-7575403|uniprotkb:Q8BLX3|intact:MINT-4096561|ensembl:ENSMUSP00000029482 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:gpsm2_mouse(display_long)|uniprotkb:Gpsm2(gene name)|psi-mi:Gpsm2(display_short)|uniprotkb:Lgn(gene name synonym)|uniprotkb:Pins(gene name synonym)|uniprotkb:Pins homolog(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_083798.2|ensembl:ENSMUSG00000027883(gene)|ensembl:ENSMUST00000029482(transcript)|go:"GO:0000132"(establishment of mitotic spindle orientation)|go:"GO:0000166"(nucleotide binding)|go:"GO:0001965"(G-protein alpha-subunit binding)|go:"GO:0005092"(GDP-dissociation inhibitor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005938"(cell cortex)|go:"GO:0007052"(mitotic spindle organization)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031291"(Ran protein signal transduction)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0043621"(protein self-association)|go:"GO:0051301"(cell division)|go:"GO:0051661"(maintenance of centrosome location)|go:"GO:0060236"(regulation of mitotic spindle organization)|go:"GO:0070840"(dynein complex binding)|go:"GO:0097431"(mitotic spindle pole)|go:"GO:0097575"(lateral cell cortex)|go:"GO:0099738"(cell cortex region)|go:"GO:1904778"(positive regulation of protein localization to cell cortex)|go:"GO:1905832"(positive regulation of spindle assembly)|interpro:IPR003109(GoLoco)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|mint:Q8VDU0|rcsb pdb:3RO2|rcsb pdb:3RO3|rcsb pdb:4G2V|rcsb pdb:4G5O|rcsb pdb:4G5Q|rcsb pdb:4G5R|rcsb pdb:4G5S|rcsb pdb:4JHR|reactome:R-MMU-418594|dip:DIP-60164N|entrezgene/locuslink:76123(identity) - - comment:mint|comment:homomint|function:"Plays an important role in spindle pole orientation (By similarity). Interacts and contributes to the functional activity of G(i) alpha proteins. Acts to stabilize the apical complex during neuroblast divisions"|author-confidence:7.719124128242704 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:7VdCk+rhJu/c4S+qR6g1X2lazuk10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q8C008 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-8317102|uniprotkb:Q8C060|intact:MINT-4113786|uniprotkb:A2AN93|ensembl:ENSMUSP00000080643 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:dzan1_mouse(display_long)|uniprotkb:Dzank1(gene name)|psi-mi:Dzank1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_766447.2|ensembl:ENSMUSG00000037259(gene)|ensembl:ENSMUST00000081982(transcript)|go:"GO:0046872"(metal ion binding)|interpro:IPR025874|interpro:IPR026876|interpro:IPR036770|mint:Q8C008|entrezgene/locuslink:241688(identity) - - comment:mint|author-confidence:10.217075822133843 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:ozGQu95/TVKGDwRgLlTCq+bl3PM10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q9D7V9 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-8400618|uniprotkb:Q9D6B4|uniprotkb:Q5KTC6|uniprotkb:Q99KM3|intact:MINT-4123901|ensembl:ENSMUSP00000108726 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:naaa_mouse(display_long)|uniprotkb:Naaa(gene name)|psi-mi:Naaa(display_short)|uniprotkb:Asahl(gene name synonym)|uniprotkb:N-acylsphingosine amidohydrolase-like(gene name synonym)|uniprotkb:Acylsphingosine deacylase NAAA(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_001157159.1|refseq:NP_080248.2|ensembl:ENSMUSG00000029413(gene)|ensembl:ENSMUST00000113102(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0006631"(fatty acid metabolic process)|go:"GO:0006670"(sphingosine metabolic process)|go:"GO:0016042"(lipid catabolic process)|go:"GO:0016810"("hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds")|go:"GO:0017040"(N-acylsphingosine amidohydrolase activity)|go:"GO:0017064"(fatty acid amide hydrolase activity)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0047412"("N-(long-chain-acyl)ethanolamine deacylase activity")|go:"GO:0070291"(N-acylethanolamine metabolic process)|go:"GO:0070292"(N-acylphosphatidylethanolamine metabolic process)|go:"GO:0102121"(ceramidase activity)|interpro:IPR016699(Acid ceramidase-like)|interpro:IPR029130|interpro:IPR029132|mint:Q9D7V9|rcsb pdb:6DXY|reactome:R-MMU-112310|entrezgene/locuslink:67111(identity) - - comment:mint|function:Degrades bioactive fatty acid amides to their corresponding acids, with a preference for N-palmitoylethanolamine|author-confidence:2.4417236830596605 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:6lH0S8QruJ58sZyxptJINdJCxqU10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q9D0I8 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-8334537|intact:MINT-4102427|uniprotkb:Q99JR7|ensembl:ENSMUSP00000099561 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:mrt4_mouse(display_long)|uniprotkb:Mrto4(gene name)|psi-mi:Mrto4(display_short)|uniprotkb:Mrt4(gene name synonym)|uniprotkb:Ribosome assembly factor Mrto4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_076025.1|refseq:NP_001277739.1|ensembl:ENSMUSG00000028741(gene)|ensembl:ENSMUST00000102503(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR001790(Ribosomal protein L10)|interpro:IPR033867|interpro:IPR040637|interpro:IPR043141|interpro:IPR043164|mint:Q9D0I8|entrezgene/locuslink:69902(identity) - - comment:mint|function:Involved in mRNA turnover and ribosome assembly|author-confidence:2.9070774107982773 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:WyF1Sc5bIyTt1MQEgMdUktTxQgY10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q921E2 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-8399593|uniprotkb:Q8BKP0|intact:MINT-4122479 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:rab31_mouse(display_long)|uniprotkb:Rab31(gene name)|psi-mi:Rab31(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) interpro:IPR027417|refseq:NP_598446.2|mint:Q921E2|go:"GO:0001891"(phagocytic cup)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005769"(early endosome)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0031623"(receptor internalization)|go:"GO:0032588"(trans-Golgi network membrane)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048193"(Golgi vesicle transport)|go:"GO:0060100"(positive regulation of phagocytosis, engulfment)|go:"GO:0090382"(phagosome maturation)|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0036186"(early phagosome membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|entrezgene/locuslink:106572(identity) - - comment:mint|author-confidence:136.73367022539398 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:DvaqDDmQHiSOMl40jbS/w3BOwnc10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q3UHH1 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-8419341|uniprotkb:Q8CE12|uniprotkb:Q8CHC3|intact:MINT-4115901|uniprotkb:Q9D789|uniprotkb:Q80Y41|uniprotkb:Q5U4B9|uniprotkb:Q6PCY6|uniprotkb:B2RX90|ensembl:ENSMUSP00000022358 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:zswm8_mouse(display_long)|uniprotkb:Zswim8(gene name)|psi-mi:Zswim8(display_short)|uniprotkb:Kiaa0913(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_001239010.1|refseq:NP_001239011.1|refseq:NP_082272.1|ensembl:ENSMUSG00000021819(gene)|ensembl:ENSMUST00000022358(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031462"(Cul2-RING ubiquitin ligase complex)|go:"GO:0031463"(Cul3-RING ubiquitin ligase complex)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:1902667"(regulation of axon guidance)|go:"GO:1990756"(ubiquitin ligase-substrate adaptor activity)|go:"GO:2000627"(positive regulation of miRNA catabolic process)|interpro:IPR007527(Zinc finger, SWIM-type)|mint:Q3UHH1|entrezgene/locuslink:268721(identity) - - comment:mint|author-confidence:25.565002258045514 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:C5V4tZMPbr+6VWuzv3N9p7BzPfw10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q62230 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-8401373|uniprotkb:D3YVZ3|uniprotkb:Q62229|uniprotkb:D3YVZ4|uniprotkb:Q62228|uniprotkb:O55216|intact:MINT-4135133 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:sn_mouse(display_long)|uniprotkb:Siglec1(gene name)|psi-mi:Siglec1(display_short)|uniprotkb:Sa(gene name synonym)|uniprotkb:Sn(gene name synonym)|uniprotkb:Sialic acid-binding Ig-like lectin 1(gene name synonym)|uniprotkb:Sheep erythrocyte receptor(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_035556.3|interpro:IPR013098(Immunoglobulin I-set)|interpro:IPR013151(Immunoglobulin)|interpro:IPR036179|mint:Q62230|go:"GO:0005576"(extracellular region)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007155"(cell adhesion)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030246"(carbohydrate binding)|go:"GO:0046790"(virion binding)|go:"GO:0070234"(positive regulation of T cell apoptotic process)|go:"GO:0075512"(clathrin-dependent endocytosis of virus by host cell)|go:"GO:2001238"(positive regulation of extrinsic apoptotic signaling pathway)|rcsb pdb:1OD7|rcsb pdb:1OD9|rcsb pdb:1ODA|rcsb pdb:1QFO|rcsb pdb:1QFP|rcsb pdb:1URL|rcsb pdb:2BVE|reactome:R-MMU-198933|interpro:IPR003598(Immunoglobulin subtype 2)|interpro:IPR003599(Immunoglobulin subtype)|interpro:IPR007110(Immunoglobulin-like)|interpro:IPR013106(Immunoglobulin V-set)|interpro:IPR013162(CD80-like, immunoglobulin C2-set)|interpro:IPR013783(Immunoglobulin-like fold)|entrezgene/locuslink:20612(identity) - - comment:mint|function:"Macrophage-restricted adhesion molecule that mediates sialic-acid dependent binding to lymphocytes, including granulocytes, monocytes, natural killer cells, B-cells and CD8 T-cells (By similarity). Preferentially binds to alpha2,3-linked sialic acid. Binds to SPN/CD43 on T-cells. May play a role in hemopoiesis"|author-confidence:14.464521910181555 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:jx43pNnwLwNuM/RSl5pkNddLp0U10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q9JHC9 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-8411942|uniprotkb:Q8BTX8|uniprotkb:Q9JHC7|uniprotkb:Q6NST2|uniprotkb:Q9JHD0|intact:MINT-4129603|uniprotkb:Q9JHC8|ensembl:ENSMUSP00000126871|ensembl:ENSMUSP00000141197 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:elf2_mouse(display_long)|uniprotkb:Elf2(gene name)|psi-mi:Elf2(display_short)|uniprotkb:Nerf(gene name synonym)|uniprotkb:E74-like factor 2(gene name synonym)|uniprotkb:New ETS-related factor(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_001277988.1|refseq:NP_001277991.1|refseq:NP_001277992.1|refseq:NP_075991.1|ensembl:ENSMUSG00000037174(gene)|ensembl:ENSMUST00000163748(transcript)|ensembl:ENSMUST00000194641(transcript)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016604"(nuclear body)|go:"GO:0030154"(cell differentiation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000418(Ets)|interpro:IPR022084|interpro:IPR036388|interpro:IPR036390|mint:Q9JHC9|reactome:R-MMU-8939245|entrezgene/locuslink:69257(identity) - - comment:mint|function:Probably transcriptionally activates the LYN and BLK promoters and acts synergistically with RUNX1 to transactivate the BLK promoter|author-confidence:11.59332332534241 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:EIqyuMdv3OjEtKinsv2/+iiAllQ10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:P06797 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-7876993|uniprotkb:Q91UZ0|intact:MINT-1863740|ensembl:ENSMUSP00000021933|ensembl:ENSMUSP00000152169 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:catl1_mouse(display_long)|uniprotkb:Ctsl(gene name)|psi-mi:Ctsl(display_short)|uniprotkb:Ctsl1(gene name synonym)|uniprotkb:Major excreted protein(gene name synonym)|uniprotkb:p39 cysteine proteinase(gene name synonym)|uniprotkb:Cathepsin L1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_034114.1|refseq:XP_006517143.1|go:"GO:0043373"(CD4-positive, alpha-beta T cell lineage commitment)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0046697"(decidualization)|go:"GO:0048002"(antigen processing and presentation of peptide antigen)|go:"GO:0048102"(autophagic cell death)|go:"GO:0051384"(response to glucocorticoid)|go:"GO:0051603"(proteolysis involved in cellular protein catabolic process)|go:"GO:0060008"(Sertoli cell differentiation)|go:"GO:0060309"(elastin catabolic process)|go:"GO:0062023"(collagen-containing extracellular matrix)|interpro:IPR000169(Peptidase, cysteine peptidase active site)|interpro:IPR000668(Peptidase C1A, papain C-terminal)|interpro:IPR013201(Proteinase inhibitor I29, cathepsin propeptide)|go:"GO:0043204"(perikaryon)|interpro:IPR025660|interpro:IPR025661|interpro:IPR038765|interpro:IPR039417|rcsb pdb:1MVV|reactome:R-MMU-1442490|reactome:R-MMU-1474228|reactome:R-MMU-1679131|reactome:R-MMU-2022090|reactome:R-MMU-2132295|reactome:R-MMU-8939242|ensembl:ENSMUSG00000021477(gene)|ensembl:ENSMUST00000021933(transcript)|ensembl:ENSMUST00000222517(transcript)|go:"GO:0004175"(endopeptidase activity)|go:"GO:0004177"(aminopeptidase activity)|go:"GO:0004197"(cysteine-type endopeptidase activity)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005773"(vacuole)|go:"GO:0005902"(microvillus)|go:"GO:0006508"(proteolysis)|go:"GO:0006590"(thyroid hormone generation)|go:"GO:0006955"(immune response)|go:"GO:0007154"(cell communication)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008584"(male gonad development)|go:"GO:0009749"(response to glucose)|go:"GO:0009897"(external side of plasma membrane)|go:"GO:0010259"(multicellular organism aging)|go:"GO:0010839"(negative regulation of keratinocyte proliferation)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0016807"(cysteine-type carboxypeptidase activity)|go:"GO:0021675"(nerve development)|go:"GO:0030574"(collagen catabolic process)|go:"GO:0030984"(kininogen binding)|go:"GO:0031069"(hair follicle morphogenesis)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031638"(zymogen activation)|go:"GO:0034230"(enkephalin processing)|go:"GO:0034698"(response to gonadotropin)|go:"GO:0042277"(peptide binding)|go:"GO:0042393"(histone binding)|go:"GO:0042583"(chromaffin granule)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0043005"(neuron projection)|entrezgene/locuslink:13039(identity) - - comment:mint|function:Important for the overall degradation of proteins in lysosomes|author-confidence:8.400464818222874 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:oFAYLk0ZhXto2nbmx/lUdQc2EJM10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q8CIE2 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566842|uniprotkb:Q5SVX5|uniprotkb:Q5SVX6|uniprotkb:Q6P9Q5|uniprotkb:Q5SVX4|uniprotkb:Q8BJ00|uniprotkb:Q6P558|ensembl:ENSMUSP00000012612|ensembl:ENSMUSP00000105409|ensembl:ENSMUSP00000105410 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:zmiz2_mouse(display_long)|uniprotkb:D11Bwg0280e(gene name synonym)|uniprotkb:PIAS-like protein Zimp7(gene name synonym)|uniprotkb:Zimp7(gene name synonym)|uniprotkb:Zmiz2(gene name)|psi-mi:Zmiz2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_001005867.1|refseq:NP_082877.2|refseq:XP_006514811.1|refseq:XP_006514813.1|refseq:XP_011242034.1|refseq:XP_011242035.1|ensembl:ENSMUSG00000041164(gene)|ensembl:ENSMUST00000012612(transcript)|ensembl:ENSMUST00000109786(transcript)|ensembl:ENSMUST00000109787(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0043596"(nuclear replication fork)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048096"|interpro:IPR004181(Zinc finger, MIZ-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|entrezgene/locuslink:52915(identity) - - author-confidence:1.0481615225474323 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:yjv8fs2E+v03XKsfpcft8BvZUJA10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:O54905 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566862|uniprotkb:Q920V4|uniprotkb:Q8CBX4|uniprotkb:Q91V19|uniprotkb:Q91VE9|uniprotkb:Q920V3|uniprotkb:Q8BH19|uniprotkb:Q91V58|ensembl:ENSMUSP00000046118 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:b3gt2_mouse(display_long)|uniprotkb:"UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase-II"(gene name synonym)|uniprotkb:B3galt2(gene name)|psi-mi:B3galt2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_064409.3|ensembl:ENSMUSG00000033849(gene)|ensembl:ENSMUST00000038252(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006682"(galactosylceramide biosynthetic process)|go:"GO:0008375"(acetylglucosaminyltransferase activity)|go:"GO:0008376"(acetylgalactosaminyltransferase activity)|go:"GO:0008499"("UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity")|go:"GO:0008532"(N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity)|go:"GO:0009312"(oligosaccharide biosynthetic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030311"(poly-N-acetyllactosamine biosynthetic process)|go:"GO:0047275"(glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity)|interpro:IPR002659(Glycosyl transferase, family 31)|reactome:R-MMU-9037629|entrezgene/locuslink:26878(identity) - - author-confidence:4.973947688314747 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:JdZAN2buP6/krMA/vBpnIuoou0E10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q9JM63 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-2309655|ensembl:ENSMUSP00000054356 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:kcj10_mouse(display_long)|uniprotkb:Kcnj10(gene name)|psi-mi:Kcnj10(display_short)|uniprotkb:Potassium channel, inwardly rectifying subfamily J member 10(gene name synonym)|uniprotkb:"Inward rectifier K(+) channel Kir4.1"(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_001034573.1|refseq:XP_006496740.2|ensembl:ENSMUSG00000044708(gene)|ensembl:ENSMUST00000056136(transcript)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005242"(inward rectifier potassium channel activity)|go:"GO:0005267"(potassium channel activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0005902"(microvillus)|go:"GO:0006813"(potassium ion transport)|go:"GO:0007601"(visual perception)|go:"GO:0007628"(adult walking behavior)|go:"GO:0014003"(oligodendrocyte development)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0022010"(central nervous system myelination)|go:"GO:0034765"(regulation of ion transmembrane transport)|go:"GO:0042391"(regulation of membrane potential)|go:"GO:0042802"(identical protein binding)|go:"GO:0044297"(cell body)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0051930"(regulation of sensory perception of pain)|go:"GO:0051935"(glutamate reuptake)|go:"GO:0051938"(L-glutamate import)|go:"GO:0055075"(potassium ion homeostasis)|go:"GO:0060075"(regulation of resting membrane potential)|go:"GO:0060081"(membrane hyperpolarization)|go:"GO:0071805"(potassium ion transmembrane transport)|go:"GO:0097449"(astrocyte projection)|go:"GO:0097546"(ciliary base)|go:"GO:0098793"(presynapse)|go:"GO:1905515"(non-motile cilium assembly)|go:"GO:1990573"(potassium ion import across plasma membrane)|interpro:IPR003269(Potassium channel, inwardly rectifying, Kir1.2)|interpro:IPR013518(Potassium channel, inwardly rectifying, Kir, cytoplasmic)|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR016449(Potassium channel, inwardly rectifying, Kir)|interpro:IPR040445|interpro:IPR041647|mint:Q9JM63|reactome:R-MMU-1296041|reactome:R-MMU-1296067|reactome:R-MMU-997272|entrezgene/locuslink:16513(identity) - - author-confidence:236.52214580369463 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:xYsrr3gfPI6Dob9k78XGFz3Pp2410090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q9DC26 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566884|ensembl:ENSMUSP00000031655|ensembl:ENSMUSP00000113879 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:s46a3_mouse(display_long)|uniprotkb:Slc46a3(gene name)|psi-mi:Slc46a3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_082148.1|refseq:XP_006504928.1|refseq:XP_006504929.1|refseq:XP_006504930.1|ensembl:ENSMUSG00000029650(gene)|ensembl:ENSMUST00000031655(transcript)|ensembl:ENSMUST00000118527(transcript)|go:"GO:0022857"(transmembrane transporter activity)|go:"GO:0034486"(vacuolar transmembrane transport)|go:"GO:1905103"(integral component of lysosomal membrane)|interpro:IPR011701(Major facilitator superfamily MFS-1)|interpro:IPR036259|entrezgene/locuslink:71706(identity) - - author-confidence:10.937151364020142 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:b3587zk+nj+oPw1r5e8nrFNVivk10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:P27546 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-2526714|uniprotkb:Q05BJ2|uniprotkb:Q3UIS2|uniprotkb:Q3UUH5|uniprotkb:Q3UY36|uniprotkb:Q7TPC6|uniprotkb:Q7TPD4|uniprotkb:Q80YQ5|uniprotkb:Q8CFP5|ensembl:ENSMUSP00000035055 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:map4_mouse(display_long)|uniprotkb:Map4(gene name)|psi-mi:Map4(display_short)|uniprotkb:Mtap4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_001192259.1|refseq:NP_001192261.1|refseq:NP_032659.2|ensembl:ENSMUSG00000032479(gene)|ensembl:ENSMUST00000035055(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0005829"(cytosol)|go:"GO:0005874"(microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0005930"(axoneme)|go:"GO:0007052"(mitotic spindle organization)|go:"GO:0008017"(microtubule binding)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0030424"(axon)|go:"GO:0031175"(neuron projection development)|go:"GO:0051012"(microtubule sliding)|go:"GO:0051294"(establishment of spindle orientation)|go:"GO:0051301"(cell division)|go:"GO:0072686"(mitotic spindle)|go:"GO:1902856"(negative regulation of non-motile cilium assembly)|interpro:IPR001084(Tubulin-binding Tau protein)|interpro:IPR027323|mint:P27546|go:"GO:0043005"(neuron projection)|refseq:NP_001298092.1|refseq:NP_001298093.1|refseq:XP_017168653.1|entrezgene/locuslink:17758(identity) - - author-confidence:9.918264107429415 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:DVblnhNfUaxX6rpvxn660Pq09L410090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q5BL07 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566800|uniprotkb:Q9CU85|uniprotkb:Q3UEC7|ensembl:ENSMUSP00000113304 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:pex1_mouse(display_long)|uniprotkb:Peroxin-1(gene name synonym)|uniprotkb:Pex1(gene name)|psi-mi:Pex1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_001280735.1|refseq:NP_082053.1|ensembl:ENSMUSG00000005907(gene)|ensembl:ENSMUST00000121291(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005777"(peroxisome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006625"(protein targeting to peroxisome)|go:"GO:0007031"(peroxisome organization)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008289"(lipid binding)|go:"GO:0016558"(protein import into peroxisome matrix)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0060152"(microtubule-based peroxisome localization)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR015342(Peroxisome biogenesis factor 1, N-terminal)|interpro:IPR015343(Peroxisome biogenesis factor 1, alpha/beta)|interpro:IPR025653|interpro:IPR027417|interpro:IPR029067|interpro:IPR041569|rcsb pdb:1WLF|reactome:R-MMU-9033241|entrezgene/locuslink:71382(identity) - - author-confidence:8.88902375678083 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:D8vvEOknIg7wJfkwC8JS7gLBiDA10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q8K0G8 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566879|uniprotkb:Q8CEK2|ensembl:ENSMUSP00000111639 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:esrp2_mouse(display_long)|uniprotkb:RNA-binding motif protein 35B(gene name synonym)|uniprotkb:RNA-binding protein 35B(gene name synonym)|uniprotkb:Rbm35b(gene name synonym)|uniprotkb:Esrp2(gene name)|psi-mi:Esrp2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_789808.1|ensembl:ENSMUSG00000084128(gene)|ensembl:ENSMUST00000115979(transcript)|go:"GO:0000380"(alternative mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0043484"(regulation of RNA splicing)|go:"GO:0050679"(positive regulation of epithelial cell proliferation)|go:"GO:0060441"(epithelial tube branching involved in lung morphogenesis)|go:"GO:0060445"(branching involved in salivary gland morphogenesis)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034431|interpro:IPR035979|interpro:IPR036397|reactome:R-MMU-6803529|entrezgene/locuslink:77411(identity) - - author-confidence:3.5655698932024795 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:en/yEm0PVbCXPa/2i0qUoPTpiBo10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q6PD24 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566910|uniprotkb:G3X9A8|ensembl:ENSMUSP00000053783 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:an13d_mouse(display_long)|uniprotkb:Ankrd13d(gene name)|psi-mi:Ankrd13d(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_080996.2|ensembl:ENSMUSG00000005986(gene)|ensembl:ENSMUST00000056888(transcript)|go:"GO:0002091"(negative regulation of receptor internalization)|go:"GO:0005737"(cytoplasm)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0140036"(ubiquitin-dependent protein binding)|interpro:IPR002110(Ankyrin)|interpro:IPR003903(Ubiquitin interacting motif)|interpro:IPR020683|interpro:IPR021832|interpro:IPR036770|entrezgene/locuslink:68423(identity) - - author-confidence:6.223637541747067 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:BxOlhyRSVdg2c97bIzTBKwxyipc10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q9Z1P7 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566852|ensembl:ENSMUSP00000040126 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:kank3_mouse(display_long)|uniprotkb:Ankrd47(gene name synonym)|uniprotkb:Ankyrin repeat domain-containing protein 47(gene name synonym)|uniprotkb:D17Ertd288e(gene name synonym)|uniprotkb:Ng28(gene name synonym)|uniprotkb:Kank3(gene name)|psi-mi:Kank3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_109622.1|ensembl:ENSMUSG00000042099(gene)|ensembl:ENSMUST00000048560(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005856"(cytoskeleton)|go:"GO:0030837"(negative regulation of actin filament polymerization)|go:"GO:0051497"(negative regulation of stress fiber assembly)|interpro:IPR020683|interpro:IPR021939|interpro:IPR036770|rcsb pdb:6TLH|interpro:IPR002110(Ankyrin)|entrezgene/locuslink:80880(identity) - - author-confidence:5.581745710159776 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:Y3UoZ+gREZPQL6XhEavF+X37JzM10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q7TPQ3 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566894|uniprotkb:Q922Q3|uniprotkb:Q8BUW0|uniprotkb:Q7TQ29|uniprotkb:Q7TQ27|uniprotkb:Q8BKE2|uniprotkb:Q7TQ28|ensembl:ENSMUSP00000039422 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:shprh_mouse(display_long)|uniprotkb:SNF2, histone-linker, PHD and RING finger domain-containing helicase(gene name synonym)|uniprotkb:Shprh(gene name)|psi-mi:Shprh(display_short)|uniprotkb:RING-type E3 ubiquitin transferase SHPRH(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_001071175.1|refseq:NP_001271283.1|refseq:NP_766525.3|refseq:XP_006512803.1|ensembl:ENSMUST00000044053(transcript)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0006281"(DNA repair)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016787"(hydrolase activity)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070615"|interpro:IPR000330(SNF2-related)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR005818(Histone H1/H5)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR019786|interpro:IPR027417|interpro:IPR036388|interpro:IPR036390|interpro:IPR038718|reactome:R-MMU-8866654|ensembl:ENSMUSG00000090112(gene)|entrezgene/locuslink:268281(identity) - - author-confidence:14.966825473609427 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:Yo/YbT6FfiK/PlfIDXNxN48alhA10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:P11247 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566822|uniprotkb:Q5NCP1|ensembl:ENSMUSP00000020779|ensembl:ENSMUSP00000112837 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:perm_mouse(display_long)|uniprotkb:Mpo(gene name)|psi-mi:Mpo(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_034954.2|ensembl:ENSMUSG00000009350(gene)|ensembl:ENSMUST00000020779(transcript)|ensembl:ENSMUST00000121303(transcript)|go:"GO:0001878"(response to yeast)|go:"GO:0002149"(hypochlorous acid biosynthetic process)|go:"GO:0002679"(respiratory burst involved in defense response)|go:"GO:0004601"(peroxidase activity)|go:"GO:0005615"(extracellular space)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0007568"(aging)|go:"GO:0008201"(heparin binding)|go:"GO:0009612"(response to mechanical stimulus)|go:"GO:0019430"(removal of superoxide radicals)|go:"GO:0020037"(heme binding)|go:"GO:0030141"(secretory granule)|go:"GO:0032094"(response to food)|go:"GO:0032496"(response to lipopolysaccharide)|go:"GO:0034374"(low-density lipoprotein particle remodeling)|go:"GO:0042582"(azurophil granule)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0042744"(hydrogen peroxide catabolic process)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046872"(metal ion binding)|go:"GO:0050832"(defense response to fungus)|go:"GO:1990268"(response to gold nanoparticle)|interpro:IPR010255(Haem peroxidase)|interpro:IPR019791|interpro:IPR029609|interpro:IPR037120|reactome:R-MMU-6798695|reactome:R-MMU-8941413|entrezgene/locuslink:17523(identity) - - author-confidence:6.4799658704899326 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:J5XzLOmhKpW1ACGhz7S2qA5zeig10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:A0A0A0MQ89 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566888|ensembl:ENSMUSP00000046658 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:a0a0a0mq89_mouse(display_long)|uniprotkb:Actr5(gene name)|psi-mi:Actr5(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_780628.3|ensembl:ENSMUSG00000037761(gene)|ensembl:ENSMUST00000045644(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0006302"(double-strand break repair)|go:"GO:0031011"(Ino80 complex)|go:"GO:0070914"(UV-damage excision repair)|interpro:IPR004000(Actin/actin-like)|interpro:IPR004001(Actin, conserved site)|interpro:IPR027664|interpro:IPR043129|entrezgene/locuslink:109275(identity) - - author-confidence:10.217075822133843 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:gggwaBeTgGBRGppafdqtkshl8/w10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q9R216 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566835|uniprotkb:Q9R2B3|uniprotkb:Q9CX16|uniprotkb:O35494|ensembl:ENSMUSP00000053551 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:fzd9_mouse(display_long)|uniprotkb:Fzd3(gene name synonym)|uniprotkb:Fzd9(gene name)|psi-mi:Fzd9(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_034376.1|ensembl:ENSMUSG00000049551(gene)|ensembl:ENSMUST00000062572(transcript)|go:"GO:0001503"(ossification)|go:"GO:0001836"(release of cytochrome c from mitochondria)|go:"GO:0004930"(G protein-coupled receptor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0007405"(neuroblast proliferation)|go:"GO:0007611"(learning or memory)|go:"GO:0009986"(cell surface)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0017147"(Wnt-protein binding)|go:"GO:0030183"(B cell differentiation)|go:"GO:0030501"(positive regulation of bone mineralization)|go:"GO:0031527"(filopodium membrane)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042813"(Wnt-activated receptor activity)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051480"(regulation of cytosolic calcium ion concentration)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051902"(negative regulation of mitochondrial depolarization)|go:"GO:0060070"(canonical Wnt signaling pathway)|go:"GO:0060546"(negative regulation of necroptotic process)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:0098794"(postsynapse)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099173"(postsynapse organization)|go:"GO:0099566"(regulation of postsynaptic cytosolic calcium ion concentration)|go:"GO:1901029"(negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway)|go:"GO:1904393"(regulation of skeletal muscle acetylcholine-gated channel clustering)|go:"GO:1904394"(negative regulation of skeletal muscle acetylcholine-gated channel clustering)|go:"GO:1990523"(bone regeneration)|go:"GO:2000179"(positive regulation of neural precursor cell proliferation)|interpro:IPR000539(Frizzled protein)|interpro:IPR015526(Frizzled related)|interpro:IPR017981|interpro:IPR020067|interpro:IPR036790|interpro:IPR041777|entrezgene/locuslink:14371(identity) - - author-confidence:1.9101458536750806 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:bODmWpwG3O8MJo8Kyy1yBYHSGqE10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q5SSH7 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566812|uniprotkb:Q8C710|uniprotkb:Q8CI54|uniprotkb:Q499C8|uniprotkb:Q6ZQC5 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:zzef1_mouse(display_long)|uniprotkb:Kiaa0399(gene name synonym)|uniprotkb:Zzef1(gene name)|psi-mi:Zzef1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) interpro:IPR040099|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR004939(Anaphase-promoting complex, subunit 10)|interpro:IPR008979(Galactose-binding like)|interpro:IPR011992(EF-Hand type)|refseq:NP_001039001.1|interpro:IPR041986|go:"GO:0005509"(calcium ion binding)|go:"GO:0008270"(zinc ion binding)|interpro:IPR043145|entrezgene/locuslink:195018(identity) - - author-confidence:2.7544585242556927 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:YUjKPpOzsZy2UKAL6rwkhu6TYNA10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q9D9V3 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566915|uniprotkb:Q8C185|uniprotkb:Q3UM30|uniprotkb:Q9CTC5|uniprotkb:Q3U8C0|ensembl:ENSMUSP00000020034 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:echd1_mouse(display_long)|uniprotkb:Enoyl-CoA hydratase domain-containing protein 1(gene name synonym)|uniprotkb:Methylmalonyl-CoA decarboxylase(gene name synonym)|uniprotkb:Echdc1(gene name)|psi-mi:Echdc1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_001103665.1|refseq:NP_080131.4|ensembl:ENSMUSG00000019883(gene)|ensembl:ENSMUST00000020034(transcript)|go:"GO:0004300"(enoyl-CoA hydratase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006635"(fatty acid beta-oxidation)|go:"GO:0016831"(carboxy-lyase activity)|interpro:IPR001753(Crotonase, core)|interpro:IPR018376|interpro:IPR029045|entrezgene/locuslink:52665(identity) - - author-confidence:10.217075822133843 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:4NmBObZGpap8Y5gELqbQz4brDVk10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q7TT18 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-1216367|uniprotkb:Q3TJ86|uniprotkb:Q3TZW1|uniprotkb:Q3UVK5|uniprotkb:Q3UYZ7|uniprotkb:Q80ZK7|uniprotkb:Q8C4A1|uniprotkb:Q9JK31|ensembl:ENSMUSP00000032335 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:mcaf1_mouse(display_long)|uniprotkb:Atf7ip(gene name)|psi-mi:Atf7ip(display_short)|uniprotkb:Mcaf1(gene name synonym)|uniprotkb:ATFa-associated modulator(gene name synonym)|uniprotkb:MBD1-containing chromatin-associated factor 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_062299.2|refseq:XP_006506452.2|refseq:XP_017177170.1|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045898"(regulation of RNA polymerase II transcription preinitiation complex assembly)|go:"GO:0050821"(protein stabilization)|go:"GO:0090309"(positive regulation of DNA methylation-dependent heterochromatin assembly)|interpro:IPR003961(Fibronectin, type III)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR026085|interpro:IPR031870|interpro:IPR036116|mint:Q7TT18|reactome:R-MMU-3214841|ensembl:ENSMUSG00000030213(gene)|ensembl:ENSMUST00000032335(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006306"(DNA methylation)|go:"GO:0016604"(nuclear body)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|entrezgene/locuslink:54343(identity) - - author-confidence:289.8241580524759 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:ZaghN26qtGUUIXwe2DJhonroU6E10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:P70701 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566831|ensembl:ENSMUSP00000006718 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:wn10a_mouse(display_long)|uniprotkb:Wnt10a(gene name)|psi-mi:Wnt10a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_033544.1|ensembl:ENSMUSG00000026167(gene)|ensembl:ENSMUST00000006718(transcript)|go:"GO:0001942"(hair follicle development)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005109"(frizzled binding)|go:"GO:0005125"(cytokine activity)|go:"GO:0005615"(extracellular space)|go:"GO:0007165"(signal transduction)|go:"GO:0007267"(cell-cell signaling)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0014033"(neural crest cell differentiation)|go:"GO:0030182"(neuron differentiation)|go:"GO:0031069"(hair follicle morphogenesis)|go:"GO:0042476"(odontogenesis)|go:"GO:0042487"(regulation of odontogenesis of dentin-containing tooth)|go:"GO:0043586"(tongue development)|go:"GO:0043588"(skin development)|go:"GO:0045165"(cell fate commitment)|go:"GO:0048018"(receptor ligand activity)|go:"GO:0048730"(epidermis morphogenesis)|go:"GO:0048733"(sebaceous gland development)|go:"GO:0060070"(canonical Wnt signaling pathway)|go:"GO:0071560"(cellular response to transforming growth factor beta stimulus)|interpro:IPR005817(Wnt superfamily)|interpro:IPR013302(Wnt-10 protein)|interpro:IPR018161|interpro:IPR043158|reactome:R-MMU-3238698|entrezgene/locuslink:22409(identity) - - author-confidence:7.719124128242704 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:8u9XopFcmED5bpClKz6IjBZRb5I10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q60935 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566905|uniprotkb:P70688|ensembl:ENSMUSP00000033300|ensembl:ENSMUSP00000147911 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:nar1_mouse(display_long)|uniprotkb:ADP-ribosyltransferase C2 and C3 toxin-like 1(gene name synonym)|uniprotkb:Art2(gene name synonym)|uniprotkb:"Mono(ADP-ribosyl)transferase 1"(gene name synonym)|uniprotkb:YAC-1(gene name synonym)|uniprotkb:Art1(gene name)|psi-mi:Art1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_033840.2|refseq:XP_011239959.1|ensembl:ENSMUSG00000030996(gene)|ensembl:ENSMUST00000033300(transcript)|ensembl:ENSMUST00000209809(transcript)|go:"GO:0003950"(NAD+ ADP-ribosyltransferase activity)|go:"GO:0006471"(protein ADP-ribosylation)|go:"GO:0009986"(cell surface)|go:"GO:0018120"(peptidyl-arginine ADP-ribosylation)|go:"GO:0031225"(anchored component of membrane)|go:"GO:0033017"(sarcoplasmic reticulum membrane)|go:"GO:0106274"(NAD+-protein-arginine ADP-ribosyltransferase activity)|go:"GO:0106275"(NADP+-protein-arginine ADP-ribosyltransferase activity)|interpro:IPR000768("NAD:arginine ADP-ribosyltransferase, ART")|reactome:R-MMU-1462054|entrezgene/locuslink:11870(identity) - - author-confidence:41.80704331698853 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:kJFLdIHp/oPv/QZ8MJFBXu3YjQ410090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q3UTZ3 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566923|uniprotkb:E9Q2V5|uniprotkb:Q8JZV2|ensembl:ENSMUSP00000046898 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:tpc14_mouse(display_long)|uniprotkb:Trappc14(gene name)|psi-mi:Trappc14(display_short)|uniprotkb:Map11(gene name synonym)|uniprotkb:Microtubule-associated protein 11(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_694801.2|ensembl:ENSMUSG00000036948(gene)|ensembl:ENSMUST00000048421(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0030496"(midbody)|go:"GO:0034451"(centriolar satellite)|go:"GO:0042127"(regulation of cell population proliferation)|go:"GO:0043014"(alpha-tubulin binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0060271"(cilium assembly)|go:"GO:0072686"(mitotic spindle)|go:"GO:1990071"(TRAPPII protein complex)|interpro:IPR031626|entrezgene/locuslink:231807(identity) - - author-confidence:8.649831583719937 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:xWanyh4b6YdtlmwDv3M7zwQxmMY10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:A2AJG0 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566827|ensembl:ENSMUSP00000050992 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:a2ajg0_mouse(display_long)|uniprotkb:Rpp38(gene name)|psi-mi:Rpp38(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_001013394.2|refseq:XP_006497513.1|refseq:XP_006497514.1|ensembl:ENSMUSG00000049950(gene)|ensembl:ENSMUST00000062672(transcript)|go:"GO:0000172"(ribonuclease MRP complex)|go:"GO:0001650"(fibrillar center)|go:"GO:0001682"(tRNA 5'-leader removal)|go:"GO:0004526"(ribonuclease P activity)|go:"GO:0005655"(nucleolar ribonuclease P complex)|go:"GO:0033204"(ribonuclease P RNA binding)|interpro:IPR004038(Ribosomal protein L7Ae/L30e/S12e/Gadd45)|interpro:IPR029064|interpro:IPR042848|entrezgene/locuslink:227522(identity) - - author-confidence:4.98929882777985 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:oPxKJJeR2ONFCpf+DY8bJQL/KD410090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q8BGQ7 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566807|uniprotkb:Q8BXR0|ensembl:ENSMUSP00000034441 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:syac_mouse(display_long)|uniprotkb:Aars1(gene name)|psi-mi:Aars1(display_short)|uniprotkb:Aars(gene name synonym)|uniprotkb:Alanyl-tRNA synthetase(gene name synonym)|uniprotkb:Protein sticky(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_666329.2|refseq:XP_006530984.1|refseq:XP_006530985.1|refseq:XP_006530987.1|ensembl:ENSMUSG00000031960(gene)|ensembl:ENSMUST00000034441(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0002161"(aminoacyl-tRNA editing activity)|go:"GO:0002196"("Ser-tRNA(Ala) hydrolase activity")|go:"GO:0004813"(alanine-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006400"(tRNA modification)|go:"GO:0006419"(alanyl-tRNA aminoacylation)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016597"(amino acid binding)|go:"GO:0021680"(cerebellar Purkinje cell layer development)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0045182"(translation regulator activity)|go:"GO:0050885"(neuromuscular process controlling balance)|go:"GO:0050905"(neuromuscular process)|go:"GO:0140018"(regulation of cytoplasmic translational fidelity)|interpro:IPR002318(Alanyl-tRNA synthetase, class IIc)|interpro:IPR003156(Phosphoesterase, DHHA1)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR012947(Threonyl/alanyl tRNA synthetase, SAD)|interpro:IPR018162|interpro:IPR018163|interpro:IPR018164|interpro:IPR018165|interpro:IPR023033|refseq:XP_017168237.1|entrezgene/locuslink:234734(identity) - - author-confidence:27.10118721428584 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:AAJaTdSOMiW18YTZiS1MbVDYX5Y10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:P97819 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566856|uniprotkb:Q99LA9|uniprotkb:Q9JK61|ensembl:ENSMUSP00000134672 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:plpl9_mouse(display_long)|uniprotkb:2-lysophosphatidylcholine acylhydrolase(gene name synonym)|uniprotkb:Palmitoyl-CoA hydrolase(gene name synonym)|uniprotkb:Group VI phospholipase A2(gene name synonym)|uniprotkb:Intracellular membrane-associated calcium-independent phospholipase A2 beta(gene name synonym)|uniprotkb:Patatin-like phospholipase domain-containing protein 9(gene name synonym)|uniprotkb:Pnpla9(gene name synonym)|uniprotkb:Pla2g6(gene name)|psi-mi:Pla2g6(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_001185952.1|refseq:NP_001185953.1|refseq:NP_001185954.1|refseq:NP_058611.1|refseq:XP_006521215.1|refseq:XP_006521216.1|refseq:XP_006521217.1|refseq:XP_006521218.1|refseq:XP_006521219.1|refseq:XP_006521220.1|refseq:XP_006521221.1|refseq:XP_006521222.1|refseq:XP_006521223.1|ensembl:ENSMUSG00000042632(gene)|ensembl:ENSMUST00000174021(transcript)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0003847"(1-alkyl-2-acetylglycerophosphocholine esterase activity)|go:"GO:0004622"(lysophospholipase activity)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005615"(extracellular space)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006935"(chemotaxis)|go:"GO:0007204"(positive regulation of cytosolic calcium ion concentration)|go:"GO:0007613"(memory)|go:"GO:0014832"(urinary bladder smooth muscle contraction)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016290"(palmitoyl-CoA hydrolase activity)|go:"GO:0017171"(serine hydrolase activity)|go:"GO:0019731"(antibacterial humoral response)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031143"(pseudopodium)|go:"GO:0032049"(cardiolipin biosynthetic process)|go:"GO:0034451"(centriolar satellite)|go:"GO:0034638"(phosphatidylcholine catabolic process)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035774"(positive regulation of insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0035965"(cardiolipin acyl-chain remodeling)|go:"GO:0042311"(vasodilation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043008"(ATP-dependent protein binding)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0046338"(phosphatidylethanolamine catabolic process)|go:"GO:0046469"(platelet activating factor metabolic process)|go:"GO:0046473"(phosphatidic acid metabolic process)|go:"GO:0047499"(calcium-independent phospholipase A2 activity)|go:"GO:0051967"(negative regulation of synaptic transmission, glutamatergic)|go:"GO:0060135"(maternal process involved in female pregnancy)|go:"GO:0090037"(positive regulation of protein kinase C signaling)|go:"GO:0090200"(positive regulation of release of cytochrome c from mitochondria)|go:"GO:0090238"(positive regulation of arachidonic acid secretion)|go:"GO:0102545"(phosphatidyl phospholipase B activity)|go:"GO:0102567"|go:"GO:0102568"|go:"GO:0102991"(myristoyl-CoA hydrolase activity)|go:"GO:1901339"(regulation of store-operated calcium channel activity)|go:"GO:2000304"(positive regulation of ceramide biosynthetic process)|interpro:IPR002110(Ankyrin)|interpro:IPR002641(Patatin)|interpro:IPR016035(Acyl transferase/acyl hydrolase/lysophospholipase)|interpro:IPR020683|interpro:IPR036770|reactome:R-MMU-1482788|reactome:R-MMU-1482839|reactome:R-MMU-2029485|reactome:R-MMU-6811436|refseq:XP_017172187.1|entrezgene/locuslink:53357(identity) - - author-confidence:16.48159023524729 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:0KpCuPTxpld1rBYdVZPIjUKLPEQ10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35285 uniprotkb:Q91ZD6 intact:EBI-6552605|ensembl:ENSMUSP00000029024|uniprotkb:Q3UCA7|uniprotkb:Q91VD4 intact:EBI-11566873|uniprotkb:Q99KD2|uniprotkb:Q7TN80|ensembl:ENSMUSP00000110477 psi-mi:rb22a_mouse(display_long)|uniprotkb:Rab22a(gene name)|psi-mi:Rab22a(display_short)|uniprotkb:Rab22(gene name synonym)|uniprotkb:Rab-14(gene name synonym) psi-mi:eaf2_mouse(display_long)|uniprotkb:Ehrlich S-II transcriptional activator factor(gene name synonym)|uniprotkb:Festa(gene name synonym)|uniprotkb:Testosterone-regulated apoptosis inducer and tumor suppressor protein(gene name synonym)|uniprotkb:Traits(gene name synonym)|uniprotkb:Eaf2(gene name)|psi-mi:Eaf2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11566892|imex:IM-24977-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000027519(gene)|ensembl:ENSMUST00000029024(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0097494"(regulation of vesicle size)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35285|rcsb pdb:1YVD|rcsb pdb:1Z0J|reactome:R-MMU-8873719|refseq:NP_077756.2|dip:DIP-60516N|entrezgene/locuslink:19334(identity) refseq:NP_001106872.1|refseq:NP_001106876.1|refseq:NP_598872.1|refseq:XP_006521746.1|refseq:XP_006521747.1|refseq:XP_006521748.1|refseq:XP_006521749.1|ensembl:ENSMUSG00000022838(gene)|ensembl:ENSMUST00000114829(transcript)|go:"GO:0003711"(transcription elongation regulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0008023"(transcription elongation factor complex)|go:"GO:0016607"(nuclear speck)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0032783"(super elongation complex)|go:"GO:0034243"(regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0060770"(negative regulation of epithelial cell proliferation involved in prostate gland development)|go:"GO:0097193"(intrinsic apoptotic signaling pathway)|interpro:IPR019194|interpro:IPR027093|reactome:R-MMU-112382|reactome:R-MMU-674695|reactome:R-MMU-75955|entrezgene/locuslink:106389(identity) - - author-confidence:8.649831583719937 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/12 rogid:Msg30/nyg0ZQXr/FJYlnTy6isCM10090 rogid:898t1bILc4EGD7qVewpbO6RBSsE10090 intact-crc:5E1331ED2BE91CCC|rigid:rezEvcTnl+HgCR0iMpjZnTWMQeg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35290 uniprotkb:P15208 intact:EBI-6552655|ensembl:ENSMUSP00000046188 intact:EBI-6999015|ensembl:ENSMUSP00000088837|uniprotkb:F8VPU4|intact:MINT-1516207 psi-mi:rab24_mouse(display_long)|uniprotkb:Rab24(gene name)|psi-mi:Rab24(display_short)|uniprotkb:Rab-16(gene name synonym) psi-mi:insr_mouse(display_long)|uniprotkb:Insr(gene name)|psi-mi:Insr(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567101|imex:IM-24977-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000034789(gene)|ensembl:ENSMUST00000035242(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006914"(autophagy)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0030139"(endocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041828|mint:P35290|reactome:R-MMU-6798695|reactome:R-MMU-8873719|refseq:NP_033026.1|entrezgene/locuslink:19336(identity) ensembl:ENSMUSG00000005534(gene)|ensembl:ENSMUST00000091291(transcript)|go:"GO:0000187"(obsolete activation of MAPK activity)|go:"GO:0001540"(amyloid-beta binding)|go:"GO:0001933"(negative regulation of protein phosphorylation)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0002092"(positive regulation of receptor internalization)|go:"GO:0003007"(heart morphogenesis)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004713"(protein tyrosine kinase activity)|go:"GO:0004714"(transmembrane receptor protein tyrosine kinase activity)|go:"GO:0005009"(insulin-activated receptor activity)|go:"GO:0005159"(insulin-like growth factor receptor binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0005899"(insulin receptor complex)|go:"GO:0005901"(caveola)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006898"(receptor-mediated endocytosis)|go:"GO:0007169"(transmembrane receptor protein tyrosine kinase signaling pathway)|go:"GO:0007186"(G protein-coupled receptor signaling pathway)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008286"(insulin receptor signaling pathway)|go:"GO:0008544"(epidermis development)|go:"GO:0008584"(male gonad development)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0009897"(external side of plasma membrane)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010560"(positive regulation of glycoprotein biosynthetic process)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0014068"(positive regulation of phosphatidylinositol 3-kinase signaling)|go:"GO:0016020"(membrane)|go:"GO:0018108"(peptidyl-tyrosine phosphorylation)|go:"GO:0019087"(transformation of host cell by virus)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030238"(male sex determination)|go:"GO:0030325"(adrenal gland development)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030424"(axon)|go:"GO:0031017"(exocrine pancreas development)|go:"GO:0031405"(lipoic acid binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031667"(response to nutrient levels)|go:"GO:0031994"(insulin-like growth factor I binding)|go:"GO:0031995"(insulin-like growth factor II binding)|go:"GO:0032148"(activation of protein kinase B activity)|go:"GO:0032410"(negative regulation of transporter activity)|go:"GO:0032590"(dendrite membrane)|go:"GO:0032809"(neuronal cell body membrane)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0033674"(positive regulation of kinase activity)|go:"GO:0034612"(response to tumor necrosis factor)|go:"GO:0038024"(cargo receptor activity)|go:"GO:0038083"(peptidyl-tyrosine autophosphorylation)|go:"GO:0042327"(positive regulation of phosphorylation)|go:"GO:0042593"(glucose homeostasis)|go:"GO:0042802"(identical protein binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043235"(receptor complex)|go:"GO:0043243"(positive regulation of protein-containing complex disassembly)|go:"GO:0043410"(positive regulation of MAPK cascade)|go:"GO:0043423"(3-phosphoinositide-dependent protein kinase binding)|go:"GO:0043548"(phosphatidylinositol 3-kinase binding)|go:"GO:0043559"(insulin binding)|go:"GO:0043560"(insulin receptor substrate binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045202"(synapse)|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045725"(positive regulation of glycogen biosynthetic process)|go:"GO:0032147"(activation of protein kinase activity)|go:"GO:0045821"(positive regulation of glycolytic process)|go:"GO:0045840"(positive regulation of mitotic nuclear division)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045995"(regulation of embryonic development)|go:"GO:0046326"(positive regulation of glucose import)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0048639"(positive regulation of developmental growth)|go:"GO:0051425"(PTB domain binding)|go:"GO:0051446"(positive regulation of meiotic cell cycle)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060267"(positive regulation of respiratory burst)|go:"GO:0060417"(yolk)|go:"GO:0071363"(cellular response to growth factor stimulus)|go:"GO:0097062"(dendritic spine maintenance)|go:"GO:0097242"(amyloid-beta clearance)|go:"GO:2000194"(regulation of female gonad development)|go:"GO:2000252"(negative regulation of feeding behavior)|interpro:IPR000494(EGF receptor, L domain)|go:"GO:1990535"(neuron projection maintenance)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001245(Tyrosine protein kinase)|interpro:IPR002011(Receptor tyrosine kinase, class II, conserved site)|interpro:IPR003961(Fibronectin, type III)|interpro:IPR006211(Furin-like cysteine rich region)|interpro:IPR006212(Furin-like repeat)|interpro:IPR008266(Tyrosine protein kinase, active site)|interpro:IPR009030(Growth factor, receptor)|interpro:IPR011009(Protein kinase-like)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR016246(Insulin receptor)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR020635|interpro:IPR036116|interpro:IPR036941|interpro:IPR040969|mint:P15208|rcsb pdb:1LK2|reactome:R-MMU-6811558|reactome:R-MMU-74713|reactome:R-MMU-74749|reactome:R-MMU-74751|reactome:R-MMU-74752|reactome:R-MMU-77387|refseq:NP_034698.2|dip:DIP-41452N|entrezgene/locuslink:16337(identity) - - comment:mint|function:This receptor binds insulin and has a tyrosine-protein kinase activity|author-confidence:3.5509327602241267 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:a9WRf3hLgJ9Id7j/fl5NbNAMVTg10090 rogid:DduFddui4LY0r8EIHI5S5EN485Y10090 intact-crc:127A0356DC84E54A|rigid:AwsiXBRv+Z9uY5b+C0NTftQ9zFg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35290 uniprotkb:Q7TNB8 intact:EBI-6552655|ensembl:ENSMUSP00000046188 intact:EBI-11567093|uniprotkb:Q70X02|uniprotkb:Q6P3A3|uniprotkb:Q3UE14|ensembl:ENSMUSP00000041635|ensembl:ENSMUSP00000151590 psi-mi:rab24_mouse(display_long)|uniprotkb:Rab24(gene name)|psi-mi:Rab24(display_short)|uniprotkb:Rab-16(gene name synonym) psi-mi:sbno2_mouse(display_long)|uniprotkb:Sno(gene name synonym)|uniprotkb:Stno(gene name synonym)|uniprotkb:Sbno2(gene name)|psi-mi:Sbno2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567101|imex:IM-24977-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000034789(gene)|ensembl:ENSMUST00000035242(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006914"(autophagy)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0030139"(endocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041828|mint:P35290|reactome:R-MMU-6798695|reactome:R-MMU-8873719|refseq:NP_033026.1|entrezgene/locuslink:19336(identity) refseq:NP_906271.1|refseq:XP_006513555.1|refseq:XP_006513556.1|refseq:XP_006513557.1|refseq:XP_006513558.1|refseq:XP_006513559.1|ensembl:ENSMUSG00000035673(gene)|ensembl:ENSMUST00000042771(transcript)|ensembl:ENSMUST00000219260(transcript)|go:"GO:0002281"(macrophage activation involved in immune response)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0030282"(bone mineralization)|go:"GO:0030316"(osteoclast differentiation)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0042393"(histone binding)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050727"(regulation of inflammatory response)|go:"GO:0061430"(bone trabecula morphogenesis)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071348"(cellular response to interleukin-11)|go:"GO:0071354"(cellular response to interleukin-6)|go:"GO:0072674"(multinuclear osteoclast differentiation)|go:"GO:0072675"(osteoclast fusion)|go:"GO:1990830"(cellular response to leukemia inhibitory factor)|interpro:IPR026741|interpro:IPR026937|interpro:IPR027417|interpro:IPR030410|interpro:IPR039187|entrezgene/locuslink:216161(identity) - - author-confidence:9.364909080198993 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:a9WRf3hLgJ9Id7j/fl5NbNAMVTg10090 rogid:oMJtH/jct9exK528OJl0B+H3yyE10090 intact-crc:127A0356DC84E54A|rigid:AwsiXBRv+Z9uY5b+C0NTftQ9zFg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35290 uniprotkb:Q9WVG6 intact:EBI-6552655|ensembl:ENSMUSP00000046188 intact:EBI-4414343|uniprotkb:Q3TYB9|uniprotkb:Q8K1Y5|uniprotkb:Q91W24|uniprotkb:Q99KX8|ensembl:ENSMUSP00000034703 psi-mi:rab24_mouse(display_long)|uniprotkb:Rab24(gene name)|psi-mi:Rab24(display_short)|uniprotkb:Rab-16(gene name synonym) psi-mi:carm1_mouse(display_long)|uniprotkb:Carm1(gene name)|psi-mi:Carm1(display_short)|uniprotkb:Prmt4(gene name synonym)|uniprotkb:Coactivator-associated arginine methyltransferase 1(gene name synonym)|uniprotkb:Protein arginine N-methyltransferase 4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567101|imex:IM-24977-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000034789(gene)|ensembl:ENSMUST00000035242(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006914"(autophagy)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0030139"(endocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041828|mint:P35290|reactome:R-MMU-6798695|reactome:R-MMU-8873719|refseq:NP_033026.1|entrezgene/locuslink:19336(identity) refseq:NP_067506.2|refseq:NP_694781.1|dip:DIP-44593N|ensembl:ENSMUSG00000032185(gene)|ensembl:ENSMUST00000034703(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003420"(regulation of growth plate cartilage chondrocyte proliferation)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006479"(protein methylation)|go:"GO:0008276"(protein methyltransferase activity)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008469"(histone-arginine N-methyltransferase activity)|go:"GO:0016274"(protein-arginine N-methyltransferase activity)|go:"GO:0016571"(histone methylation)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0030518"(intracellular steroid hormone receptor signaling pathway)|go:"GO:0030520"(intracellular estrogen receptor signaling pathway)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033146"(regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0034969"(histone arginine methylation)|go:"GO:0034970"(histone H3-R2 methylation)|go:"GO:0034971"(histone H3-R17 methylation)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042054"(histone methyltransferase activity)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0045600"(positive regulation of fat cell differentiation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0051591"(response to cAMP)|go:"GO:0060350"(endochondral bone morphogenesis)|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0071168"(protein localization to chromatin)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1902415"(regulation of mRNA binding)|go:"GO:2000171"(negative regulation of dendrite development)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR020989|interpro:IPR025799|interpro:IPR029063|mint:Q9WVG6|rcsb pdb:2V74|rcsb pdb:2V7E|rcsb pdb:5IH3|rcsb pdb:5IS6|rcsb pdb:5IS7|rcsb pdb:5IS8|rcsb pdb:5IS9|rcsb pdb:5ISA|rcsb pdb:5ISB|rcsb pdb:5ISC|rcsb pdb:5ISD|rcsb pdb:5ISE|rcsb pdb:5ISF|rcsb pdb:5ISG|rcsb pdb:5ISH|rcsb pdb:5ISI|rcsb pdb:5K8V|rcsb pdb:5K8W|rcsb pdb:5K8X|rcsb pdb:5LGP|rcsb pdb:5LGQ|rcsb pdb:5LGR|rcsb pdb:5LGS|rcsb pdb:5LKJ|rcsb pdb:5LV2|rcsb pdb:5LV3|rcsb pdb:5NTC|rcsb pdb:5TBH|rcsb pdb:5TBI|rcsb pdb:5TBJ|reactome:R-MMU-3214858|reactome:R-MMU-400206|reactome:R-MMU-9018519|reactome:R-MMU-9707564|go:"GO:0035642"("histone methyltransferase activity (H3-R17 specific)")|entrezgene/locuslink:59035(identity) - - author-confidence:3.0004337589406997 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:a9WRf3hLgJ9Id7j/fl5NbNAMVTg10090 rogid:OhPIJ/O/PCm8s8oJoebgdYV133s10090 intact-crc:127A0356DC84E54A|rigid:AwsiXBRv+Z9uY5b+C0NTftQ9zFg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q9D554 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-8338145|intact:MINT-1853954|ensembl:ENSMUSP00000030734 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:sf3a3_mouse(display_long)|uniprotkb:Sf3a3(gene name)|psi-mi:Sf3a3(display_short)|uniprotkb:Sap61(gene name synonym)|uniprotkb:Spliceosome-associated protein 61(gene name synonym)|uniprotkb:SF3a60(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_083433.1|ensembl:ENSMUSG00000028902(gene)|ensembl:ENSMUST00000030734(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005686"(U2 snRNP)|go:"GO:0006397"(mRNA processing)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016607"(nuclear speck)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1903241"(U2-type prespliceosome assembly)|interpro:IPR000690(Zinc finger, C2H2-type matrin)|interpro:IPR021966|interpro:IPR024598|interpro:IPR031774|interpro:IPR031776|mint:Q9D554|reactome:R-MMU-72163|entrezgene/locuslink:75062(identity) - comment:mint|function:Might be involved in transcellular transport function:"Subunit of the splicing factor SF3A required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex"|comment:mint|author-confidence:8.204648539231979 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:1uFDDd2qMaHNBnQBzY/Go+IVACc10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q9Z110 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-8440240|intact:MINT-1853829|uniprotkb:Q8BGM2|uniprotkb:Q9R1P6|ensembl:ENSMUSP00000025979 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:p5cs_mouse(display_long)|uniprotkb:Aldh18a1(gene name)|psi-mi:Aldh18a1(display_short)|uniprotkb:P5cs(gene name synonym)|uniprotkb:Pycs(gene name synonym)|uniprotkb:Aldehyde dehydrogenase family 18 member A1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_705782.2|refseq:NP_062672.2|ensembl:ENSMUSG00000025007(gene)|ensembl:ENSMUST00000025979(transcript)|go:"GO:0004349"(glutamate 5-kinase activity)|go:"GO:0004350"(glutamate-5-semialdehyde dehydrogenase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0006536"(glutamate metabolic process)|go:"GO:0006561"(proline biosynthetic process)|go:"GO:0006592"(ornithine biosynthetic process)|go:"GO:0008652"(cellular amino acid biosynthetic process)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0019240"(citrulline biosynthetic process)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0055129"(L-proline biosynthetic process)|interpro:IPR000965(Gamma-glutamyl phosphate reductase GPR)|interpro:IPR001048(Aspartate/glutamate/uridylate kinase)|interpro:IPR001057(Glutamate 5-kinase)|interpro:IPR005715(Glutamate 5-kinase, ProB-related)|interpro:IPR005766(delta l-pyrroline-5-carboxylate synthetase)|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR019797|interpro:IPR020593|interpro:IPR036393|interpro:IPR041744|mint:Q9Z110|reactome:R-MMU-8964539|entrezgene/locuslink:56454(identity) - comment:mint|function:Might be involved in transcellular transport comment:mint|author-confidence:1.3796390340206242 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:bzLtsuFfMe3vEyBVOmcAcLYvbVs10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:O35286 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-8322087|uniprotkb:Q99L91|intact:MINT-4093075|ensembl:ENSMUSP00000031061 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:dhx15_mouse(display_long)|uniprotkb:Dhx15(gene name)|psi-mi:Dhx15(display_short)|uniprotkb:Ddx15(gene name synonym)|uniprotkb:Deah9(gene name synonym)|uniprotkb:DEAH box protein 15(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_031865.2|dip:DIP-61875N|ensembl:ENSMUSG00000029169(gene)|ensembl:ENSMUST00000031061(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|go:"GO:0009636"(response to toxic substance)|go:"GO:0016607"(nuclear speck)|go:"GO:0043279"(response to alkaloid)|go:"GO:0071008"(U2-type post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|mint:O35286|reactome:R-MMU-72163|entrezgene/locuslink:13204(identity) - comment:mint|function:Might be involved in transcellular transport comment:mint|function:Pre-mRNA processing factor involved in disassembly of spliceosomes after the release of mature mRNA|author-confidence:2.4447582106283434 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:3ypGFohz40OvVMkbdam/EUAw9hc10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q3UKJ7 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-8329447|uniprotkb:Q8BMY4|uniprotkb:Q6PFR6|uniprotkb:Q9JJ70|uniprotkb:Q9D1I8|intact:MINT-4129849|ensembl:ENSMUSP00000030117 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:smu1_mouse(display_long)|uniprotkb:Smu1(gene name)|psi-mi:Smu1(display_short)|uniprotkb:Smu-1 suppressor of mec-8 and unc-52 protein homolog(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_067510.3|ensembl:ENSMUSG00000028409(gene)|ensembl:ENSMUST00000030117(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008380"(RNA splicing)|go:"GO:0016607"(nuclear speck)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071011"(precatalytic spliceosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR006594(LisH dimerisation motif)|interpro:IPR006595(CTLH, C-terminal to LisH motif)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|mint:Q3UKJ7|entrezgene/locuslink:74255(identity) - comment:mint|function:Might be involved in transcellular transport comment:mint|author-confidence:1.423371931333996 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:zbTRfKynNIUSFY8IEqyYWh3JSho10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q571I9 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-8391142|intact:MINT-4113910|uniprotkb:Q3U6I2|intact:MINT-1869939|uniprotkb:Q8VD78|uniprotkb:Q3UMC3|uniprotkb:Q8C0L4 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:a16a1_mouse(display_long)|uniprotkb:Aldh16a1(gene name)|psi-mi:Aldh16a1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|refseq:NP_666066.1|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|mint:Q571I9|go:"GO:0016620"(oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor)|interpro:IPR011408(Aldehyde dehydrogenase predicted, duplicated region)|entrezgene/locuslink:69748(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:7.242167795094419 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:CJyLPOT7Nc94VcIpenyDgHuKR/I10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q91W97 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-11567136|uniprotkb:Q3UKJ9|ensembl:ENSMUSP00000020277 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:hkdc1_mouse(display_long)|uniprotkb:Hexokinase domain-containing protein 1(gene name synonym)|uniprotkb:Hkdc1(gene name)|psi-mi:Hkdc1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_663394.1|ensembl:ENSMUSG00000020080(gene)|ensembl:ENSMUST00000020277(transcript)|go:"GO:0001678"(cellular glucose homeostasis)|go:"GO:0004340"(glucokinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005536"(glucose binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006096"(glycolytic process)|go:"GO:0008865"(fructokinase activity)|go:"GO:0019158"(mannokinase activity)|go:"GO:0019318"(hexose metabolic process)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0051156"(glucose 6-phosphate metabolic process)|interpro:IPR001312(Hexokinase)|interpro:IPR019807|interpro:IPR022672|interpro:IPR022673|interpro:IPR043129|entrezgene/locuslink:216019(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:1.2834266599312054 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:tD+iEsQKxNQj4xjKkjTeZpCSfQc10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q3TC33 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-9989091|uniprotkb:Q3TPA8|uniprotkb:Q9CQ15|ensembl:ENSMUSP00000022063 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:cc127_mouse(display_long)|uniprotkb:Ccdc127(gene name)|psi-mi:Ccdc127(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_001162129.1|refseq:NP_001162130.1|refseq:NP_077163.1|ensembl:ENSMUSG00000021578(gene)|ensembl:ENSMUST00000022063(transcript)|interpro:IPR034607|entrezgene/locuslink:67433(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:289.8241580524759 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:1hiiboRUiBM/uZuvJbuMwfp8ls410090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q91VR5 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-773164|uniprotkb:Q3TU41|ensembl:ENSMUSP00000065987 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:ddx1_mouse(display_long)|uniprotkb:DEAD box protein 1(gene name synonym)|uniprotkb:Ddx1(gene name)|psi-mi:Ddx1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_598801.1|ensembl:ENSMUSG00000037149(gene)|ensembl:ENSMUST00000071103(transcript)|go:"GO:0002735"(positive regulation of myeloid dendritic cell cytokine production)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0004518"(nuclease activity)|go:"GO:0004527"(exonuclease activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006388"(tRNA splicing, via endonucleolytic cleavage and ligation)|go:"GO:0006397"(mRNA processing)|go:"GO:0008143"("poly(A) binding")|go:"GO:0009615"(response to virus)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032508"(DNA duplex unwinding)|go:"GO:0033677"(DNA/RNA helicase activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043330"(response to exogenous dsRNA)|go:"GO:0045087"(innate immune response)|go:"GO:0051607"(defense response to virus)|go:"GO:0071920"(cleavage body)|go:"GO:0072669"(tRNA-splicing ligase complex)|go:"GO:0090305"(nucleic acid phosphodiester bond hydrolysis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1903608"(protein localization to cytoplasmic stress granule)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR043136|mint:Q91VR5|entrezgene/locuslink:104721(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:1.874445529337634 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:NXUFdXIf8H/od5xV+OXhcO+51aY10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q6PB97 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-11567128|uniprotkb:Q7TSH0|uniprotkb:Q8BIB4|ensembl:ENSMUSP00000033081|ensembl:ENSMUSP00000140303 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:fxl19_mouse(display_long)|uniprotkb:F-box and leucine-rich repeat protein 19(gene name synonym)|uniprotkb:Fbxl19(gene name)|psi-mi:Fbxl19(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_766336.2|ensembl:ENSMUSG00000030811(gene)|ensembl:ENSMUST00000033081(transcript)|ensembl:ENSMUST00000186207(transcript)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006482"(protein demethylation)|go:"GO:0008270"(zinc ion binding)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0032452"(histone demethylase activity)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0045322"(unmethylated CpG binding)|interpro:IPR001810(Cyclin-like F-box)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR002857(Zinc finger, CXXC-type)|interpro:IPR006553(Leucine-rich repeat, cysteine-containing subtype)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019786|interpro:IPR019787|interpro:IPR032675|reactome:R-MMU-8951664|reactome:R-MMU-983168|entrezgene/locuslink:233902(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:2.550252669045498 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:ybbzfwZP17MCRkMVC03nTwZQsIc10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q9EQH3 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-775825|uniprotkb:Q61123|ensembl:ENSMUSP00000034131 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:vps35_mouse(display_long)|uniprotkb:Vesicle protein sorting 35(gene name synonym)|uniprotkb:Maternal-embryonic 3(gene name synonym)|uniprotkb:Vps35(gene name)|psi-mi:Vps35(display_short)|uniprotkb:Mem3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_075373.1|dip:DIP-32210N|ensembl:ENSMUSG00000031696(gene)|ensembl:ENSMUST00000034131(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006624"(vacuolar protein processing)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007040"(lysosome organization)|go:"GO:0007416"(synapse assembly)|go:"GO:0010008"(endosome membrane)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010821"(regulation of mitochondrion organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030904"(retromer complex)|go:"GO:0030906"(retromer, cargo-selective complex)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0031648"(protein destabilization)|go:"GO:0031748"(D1 dopamine receptor binding)|go:"GO:0032268"(regulation of cellular protein metabolic process)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032463"(negative regulation of protein homooligomerization)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043653"(mitochondrial fragmentation involved in apoptotic process)|go:"GO:0045056"(transcytosis)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050882"(voluntary musculoskeletal movement)|go:"GO:0060161"(positive regulation of dopamine receptor signaling pathway)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061357"(positive regulation of Wnt protein secretion)|go:"GO:0090141"(positive regulation of mitochondrial fission)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:0090326"(positive regulation of locomotion involved in locomotory behavior)|go:"GO:0097422"(tubular endosome)|go:"GO:0098793"(presynapse)|go:"GO:0098794"(postsynapse)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099003"(vesicle-mediated transport in synapse)|go:"GO:0099073"(mitochondrion-derived vesicle)|go:"GO:0099074"(mitochondrion to lysosome transport)|go:"GO:0099639"(neurotransmitter receptor transport, endosome to plasma membrane)|go:"GO:1901215"(negative regulation of neuron death)|go:"GO:1902823"(negative regulation of late endosome to lysosome transport)|go:"GO:1902950"(regulation of dendritic spine maintenance)|go:"GO:1903181"(positive regulation of dopamine biosynthetic process)|go:"GO:1903364"(positive regulation of cellular protein catabolic process)|go:"GO:1903828"(negative regulation of protein localization)|go:"GO:1905166"(negative regulation of lysosomal protein catabolic process)|go:"GO:2000331"(regulation of terminal button organization)|interpro:IPR005378(Vacuolar protein sorting-associated protein 35)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR042491|mint:Q9EQH3|rcsb pdb:6VAB|rcsb pdb:6VAC|reactome:R-MMU-3238698|entrezgene/locuslink:65114(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:1.5602826751681038 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:dK5TqSajxrGKjiNwRjeZCV519XE10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:P62631 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-642385|uniprotkb:P27706|ensembl:ENSMUSP00000054556 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:ef1a2_mouse(display_long)|uniprotkb:Eukaryotic elongation factor 1 A-2(gene name synonym)|uniprotkb:Statin-S1(gene name synonym)|uniprotkb:Eef1a2(gene name)|psi-mi:Eef1a2(display_short)|uniprotkb:Eef1al(gene name synonym)|uniprotkb:Stn(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_031932.1|go:"GO:0003746"(translation elongation factor activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005853"(eukaryotic translation elongation factor 1 complex)|go:"GO:0006412"(translation)|go:"GO:0006414"(translational elongation)|go:"GO:0010035"(response to inorganic substance)|go:"GO:0019901"(protein kinase binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0045202"(synapse)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0090218"(positive regulation of lipid kinase activity)|interpro:IPR000795(Protein synthesis factor, GTP-binding)|interpro:IPR004160(Translation elongation factor EFTu/EF1A, C-terminal)|interpro:IPR004161(Translation elongation factor EFTu/EF1A, domain 2)|interpro:IPR004539(Translation elongation factor EF1A, eukaryotic and archaeal)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR009001(Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal)|interpro:IPR027417|interpro:IPR031157|mint:P62631|ensembl:ENSMUSG00000016349(gene)|ensembl:ENSMUST00000055990(transcript)|entrezgene/locuslink:13628(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:1.2530813842443758 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:5Wr8A9JfvVaH+KRGc6VSnF2rkYE10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q9CZU3 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-6123099|ensembl:ENSMUSP00000022281 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:mtrex_mouse(display_long)|uniprotkb:Mtrex(gene name)|psi-mi:Mtrex(display_short)|uniprotkb:ATP-dependent helicase SKIV2L2(gene name synonym)|uniprotkb:Skiv2l2(gene name synonym)|uniprotkb:Superkiller viralicidic activity 2-like 2(gene name synonym)|uniprotkb:TRAMP-like complex helicase(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_082427.1|ensembl:ENSMUSG00000016018(gene)|ensembl:ENSMUST00000022281(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006397"(mRNA processing)|go:"GO:0006401"(RNA catabolic process)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0008380"(RNA splicing)|go:"GO:0016607"(nuclear speck)|go:"GO:0031499"(TRAMP complex)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012961(DSH, C-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR016438(RNA helicase, ATP-dependent, SK12/DOB1)|interpro:IPR025696|interpro:IPR027417|mint:Q9CZU3|reactome:R-MMU-6791226|reactome:R-MMU-72163|entrezgene/locuslink:72198(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:224.49684855386909 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:EpVJGMTZaEmlGdU+O9yN0J4bwM010090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q3UI45 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-11567124 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:q3ui45_mouse(display_long)|uniprotkb:Zfp162(gene name synonym)|uniprotkb:Sf1(gene name)|psi-mi:Sf1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) interpro:IPR001878(Zinc finger, CCHC-type)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR031150|interpro:IPR032570|refseq:NP_001104261.1|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0008270"(zinc ion binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0045131"(pre-mRNA branch point binding)|go:"GO:0048662"(negative regulation of smooth muscle cell proliferation)|interpro:IPR036612|entrezgene/locuslink:22668(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:4.507165947602634 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:71VEHvuawcrLTq3rtouesl0qizQ10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:P62320 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-2550316|ensembl:ENSMUSP00000020397|uniprotkb:P43331|uniprotkb:Q3TV81 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:smd3_mouse(display_long)|uniprotkb:Snrpd3(gene name)|psi-mi:Snrpd3(display_short)|uniprotkb:snRNP core protein D3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) ensembl:ENSMUSG00000020180(gene)|ensembl:ENSMUST00000020397(transcript)|go:"GO:0000243"(commitment complex)|go:"GO:0000387"(spliceosomal snRNP assembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005683"(U7 snRNP)|go:"GO:0005685"(U1 snRNP)|go:"GO:0005686"(U2 snRNP)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005697"(telomerase holoenzyme complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006479"(protein methylation)|go:"GO:0016604"(nuclear body)|go:"GO:0019899"(enzyme binding)|reactome:R-MMU-73856|reactome:R-MMU-77588|go:"GO:0034709"(methylosome)|go:"GO:0034715"(pICln-Sm protein complex)|go:"GO:0034719"(SMN-Sm protein complex)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0070034"(telomerase RNA binding)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0071208"(histone pre-mRNA DCP binding)|go:"GO:0071209"(U7 snRNA binding)|go:"GO:0097526"(spliceosomal tri-snRNP complex)|go:"GO:1990446"(U1 snRNP binding)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR027141|interpro:IPR034099|mint:P62320|reactome:R-MMU-111367|reactome:R-MMU-191859|reactome:R-MMU-72163|reactome:R-MMU-72165|refseq:NP_080371.1|entrezgene/locuslink:67332(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:1.3910631378086071 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:WkrSZVfVmSQrJYfy7mwp48xjsVA10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q91Y44 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-6260929|ensembl:ENSMUSP00000031215|uniprotkb:G3X8Z8|uniprotkb:Q59HJ4 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:brdt_mouse(display_long)|uniprotkb:Bromodomain-containing female sterile homeotic-like protein(gene name synonym)|uniprotkb:Fsrg3(gene name synonym)|uniprotkb:RING3-like protein(gene name synonym)|uniprotkb:Brdt(gene name)|psi-mi:Brdt(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) ensembl:ENSMUSG00000029279(gene)|ensembl:ENSMUST00000031215(transcript)|go:"GO:0001207"(obsolete histone displacement)|go:"GO:0005634"(nucleus)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006397"(mRNA processing)|go:"GO:0007140"(male meiotic nuclear division)|go:"GO:0007141"(male meiosis I)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008380"(RNA splicing)|go:"GO:0030154"(cell differentiation)|go:"GO:0042393"(histone binding)|go:"GO:0043484"(regulation of RNA splicing)|go:"GO:0051039"(positive regulation of transcription involved in meiotic cell cycle)|go:"GO:0070577"(lysine-acetylated histone binding)|interpro:IPR001487(Bromodomain)|interpro:IPR018359|interpro:IPR027353|interpro:IPR031354|interpro:IPR036427|interpro:IPR038336|interpro:IPR043508|interpro:IPR043509|rcsb pdb:2WP1|rcsb pdb:2WP2|go:"GO:0006355"(regulation of transcription, DNA-templated)|refseq:NP_001073342.1|refseq:NP_473395.2|dip:DIP-48975N|entrezgene/locuslink:114642(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:12.214330467192294 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:58C4boIaeO3jJDh/pGWJ6QRP1Qs10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q8R081 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-647483|uniprotkb:O54789|uniprotkb:Q8K0S7|uniprotkb:Q499X2|ensembl:ENSMUSP00000049407|ensembl:ENSMUSP00000133728 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:hnrpl_mouse(display_long)|uniprotkb:Hnrpl(gene name synonym)|uniprotkb:Hnrnpl(gene name)|psi-mi:Hnrnpl(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_796275.3|refseq:XP_006539621.1|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034816|interpro:IPR034817|interpro:IPR035005|interpro:IPR035008|interpro:IPR035979|mint:Q8R081|rcsb pdb:3S01|rcsb pdb:3TYT|reactome:R-MMU-72163|reactome:R-MMU-72203|go:"GO:1990715"(mRNA CDS binding)|ensembl:ENSMUSG00000015165(gene)|ensembl:ENSMUST00000038572(transcript)|ensembl:ENSMUST00000174548(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035770"(ribonucleoprotein granule)|go:"GO:0043484"(regulation of RNA splicing)|go:"GO:0045120"(pronucleus)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0048025"(negative regulation of mRNA splicing, via spliceosome)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0097157"(pre-mRNA intronic binding)|go:"GO:1902416"(positive regulation of mRNA binding)|entrezgene/locuslink:15388(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:1.7453888568577645 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:BApt4fekoyJ285Ve13kxstcLbV010090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:G3UVU2 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-11516601|ensembl:ENSMUSP00000117160 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:g3uvu2_mouse(display_long)|uniprotkb:Sf3a2(gene name)|psi-mi:Sf3a2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_038679.3|refseq:XP_006513457.1|refseq:XP_006513458.1|ensembl:ENSMUSG00000020211(gene)|ensembl:ENSMUST00000148665(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005686"(U2 snRNP)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0016607"(nuclear speck)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1903241"(U2-type prespliceosome assembly)|interpro:IPR000690(Zinc finger, C2H2-type matrin)|interpro:IPR003604(Zinc finger, U1-type)|interpro:IPR031781|interpro:IPR036236|entrezgene/locuslink:20222(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:5.478750274446243 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:ozT/GrYdd06uJwzDgtN4CAiznNo10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:P20029 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-772325|uniprotkb:Q3UFF2|uniprotkb:O35642|uniprotkb:Q61630|intact:EBI-4280750|ensembl:ENSMUSP00000028222|ensembl:ENSMUSP00000097747 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:bip_mouse(display_long)|uniprotkb:Immunoglobulin heavy chain-binding protein(gene name synonym)|uniprotkb:Hspa5(gene name)|psi-mi:Hspa5(display_short)|uniprotkb:Grp78(gene name synonym)|uniprotkb:78 kDa glucose-regulated protein(gene name synonym)|uniprotkb:Binding-immunoglobulin protein(gene name synonym)|uniprotkb:Heat shock protein 70 family protein 5(gene name synonym)|uniprotkb:Heat shock protein family A member 5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_001156906.1|refseq:NP_071705.3|dip:DIP-32341N|ensembl:ENSMUSG00000026864(gene)|ensembl:ENSMUST00000028222(transcript)|ensembl:ENSMUST00000100171(transcript)|go:"GO:0001554"(luteolysis)|go:"GO:0005524"(ATP binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005788"(endoplasmic reticulum lumen)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005790"(smooth endoplasmic reticulum)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006983"(ER overload response)|go:"GO:0008180"(COP9 signalosome)|go:"GO:0009986"(cell surface)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0016020"(membrane)|go:"GO:0019899"(enzyme binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021589"(cerebellum structural organization)|go:"GO:0021680"(cerebellar Purkinje cell layer development)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030496"(midbody)|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0031204"(posttranslational protein targeting to membrane, translocation)|go:"GO:0031333"(negative regulation of protein-containing complex assembly)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034620"(cellular response to unfolded protein)|go:"GO:0034663"(endoplasmic reticulum chaperone complex)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035437"(maintenance of protein localization in endoplasmic reticulum)|go:"GO:0035690"|go:"GO:0040019"(positive regulation of embryonic development)|go:"GO:0042026"(protein refolding)|go:"GO:0042149"(cellular response to glucose starvation)|go:"GO:0042220"(response to cocaine)|go:"GO:0043022"(ribosome binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051085"(chaperone cofactor-dependent protein refolding)|go:"GO:0051402"(neuron apoptotic process)|go:"GO:0051603"(proteolysis involved in cellular protein catabolic process)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0071236"(cellular response to antibiotic)|go:"GO:0071277"(cellular response to calcium ion)|go:"GO:0071287"(cellular response to manganese ion)|go:"GO:0071320"(cellular response to cAMP)|go:"GO:0071353"(cellular response to interleukin-4)|go:"GO:0071480"(cellular response to gamma radiation)|go:"GO:0097501"(stress response to metal ion)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1901998"(toxin transport)|go:"GO:1903895"(negative regulation of IRE1-mediated unfolded protein response)|go:"GO:1904313"(response to methamphetamine hydrochloride)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR013126(Heat shock protein 70)|interpro:IPR018181|interpro:IPR029047|interpro:IPR029048|interpro:IPR042050|interpro:IPR043129|mint:P20029|reactome:R-MMU-3371453|reactome:R-MMU-983170|entrezgene/locuslink:14828(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:10.989987844039561 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:AyJwwnH8IAQqF/cbTn336A79MOY10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q9DBG6 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-529941|uniprotkb:Q3TKY0|uniprotkb:Q91XH0|uniprotkb:A2ACG6|ensembl:ENSMUSP00000112081 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:rpn2_mouse(display_long)|uniprotkb:Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDa subunit(gene name synonym)|uniprotkb:Ribophorin-2(gene name synonym)|uniprotkb:Ribophorin II(gene name synonym)|uniprotkb:Rpn2(gene name)|psi-mi:Rpn2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_062616.2|ensembl:ENSMUSG00000027642(gene)|ensembl:ENSMUST00000116380(transcript)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005791"(rough endoplasmic reticulum)|go:"GO:0006487"(protein N-linked glycosylation)|go:"GO:0007568"(aging)|go:"GO:0008250"(oligosaccharyltransferase complex)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016604"(nuclear body)|go:"GO:0042493"|go:"GO:0043022"(ribosome binding)|interpro:IPR008814(Ribophorin II)|mint:Q9DBG6|rcsb pdb:5J6G|rcsb pdb:5J6H|entrezgene/locuslink:20014(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:1.4312260026882344 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:FeAH2GGWVY8J5dSaAvfrsBSx3co10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q8QZY9 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-6094674|ensembl:ENSMUSP00000075709 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:sf3b4_mouse(display_long)|uniprotkb:Sf3b4(gene name)|psi-mi:Sf3b4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_694693.1|ensembl:ENSMUSG00000068856(gene)|ensembl:ENSMUST00000076372(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0048026"(positive regulation of mRNA splicing, via spliceosome)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:1990935"(splicing factor binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034158|interpro:IPR034159|interpro:IPR035979|mint:Q8QZY9|reactome:R-MMU-72163|reactome:R-MMU-72165|entrezgene/locuslink:107701(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:5.685276650738372 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:eYaqZLWduL1MsiM0jP2BLXuEkBw10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:P57784 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-6877081|ensembl:ENSMUSP00000117947|uniprotkb:Q3U7R8|uniprotkb:Q8K2W4|uniprotkb:Q91YW1|uniprotkb:Q9JKQ3 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:ru2a_mouse(display_long)|uniprotkb:Snrpa1(gene name)|psi-mi:Snrpa1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) ensembl:ENSMUSG00000030512(gene)|ensembl:ENSMUST00000153609(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005686"(U2 snRNP)|go:"GO:0007283"(spermatogenesis)|go:"GO:0016604"(nuclear body)|go:"GO:0016607"(nuclear speck)|go:"GO:0030620"(U2 snRNA binding)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR003603(U2A'/phosphoprotein 32 family A, C-terminal)|interpro:IPR032675|interpro:IPR044640|mint:P57784|reactome:R-MMU-72163|refseq:NP_067311.4|entrezgene/locuslink:68981(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:1.460857271888315 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:AMQnbw028+3/guP4MfrfDJCFu6s10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:P07901 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-78930|ensembl:ENSMUSP00000021698|ensembl:ENSMUSP00000091921 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:hs90a_mouse(display_long)|uniprotkb:Hsp90aa1(gene name)|psi-mi:Hsp90aa1(display_short)|uniprotkb:Hsp86(gene name synonym)|uniprotkb:Hsp86-1(gene name synonym)|uniprotkb:Hspca(gene name synonym)|uniprotkb:Heat shock 86 kDa(gene name synonym)|uniprotkb:Tumor-specific transplantation 86 kDa antigen(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_034610.1|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045585"(positive regulation of cytotoxic T cell differentiation)|go:"GO:0045793"(positive regulation of cell size)|go:"GO:0046677"(response to antibiotic)|go:"GO:0048156"(tau protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048675"(axon extension)|go:"GO:0050821"(protein stabilization)|go:"GO:0051020"(GTPase binding)|go:"GO:0051022"(Rho GDP-dissociation inhibitor binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070182"(DNA polymerase binding)|go:"GO:0097110"(scaffold protein binding)|go:"GO:0097226"(sperm mitochondrial sheath)|go:"GO:0097524"(sperm plasma membrane)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0098586"(cellular response to virus)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902949"(positive regulation of tau-protein kinase activity)|go:"GO:1903364"(positive regulation of cellular protein catabolic process)|go:"GO:1903827"|go:"GO:1905323"(telomerase holoenzyme complex assembly)|go:"GO:1990782"(protein tyrosine kinase binding)|interpro:IPR001404(Heat shock protein Hsp90)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR019805|interpro:IPR020568|interpro:IPR020575|interpro:IPR036890|interpro:IPR037196|mint:P07901|rcsb pdb:5H22|reactome:R-MMU-1227986|reactome:R-MMU-1474151|reactome:R-MMU-168928|reactome:R-MMU-2029482|reactome:R-MMU-203615|reactome:R-MMU-2565942|reactome:R-MMU-3371497|reactome:R-MMU-3371511|reactome:R-MMU-3371568|reactome:R-MMU-3371571|reactome:R-MMU-380259|reactome:R-MMU-380270|reactome:R-MMU-380284|reactome:R-MMU-380320|reactome:R-MMU-399954|reactome:R-MMU-4420097|reactome:R-MMU-5218920|reactome:R-MMU-5620912|reactome:R-MMU-5675482|reactome:R-MMU-6798695|reactome:R-MMU-8852276|reactome:R-MMU-8854518|reactome:R-MMU-8863795|reactome:R-MMU-8939211|reactome:R-MMU-9009391|reactome:R-MMU-9013418|reactome:R-MMU-9018519|reactome:R-MMU-9652282|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031526"(brush border membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032273"(positive regulation of protein polymerization)|go:"GO:0032564"(dATP binding)|go:"GO:0032728"(positive regulation of interferon-beta production)|ensembl:ENSMUSG00000021270(gene)|ensembl:ENSMUST00000021698(transcript)|ensembl:ENSMUST00000094361(transcript)|go:"GO:0001764"(neuron migration)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0002134"(UTP binding)|go:"GO:0002135"(CTP binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0002230"(positive regulation of defense response to virus by host)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006809"(nitric oxide biosynthetic process)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0007004"(telomere maintenance via telomerase)|go:"GO:0009408"(response to heat)|go:"GO:0009409"(response to cold)|go:"GO:0009986"(cell surface)|go:"GO:0010592"(positive regulation of lamellipodium assembly)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017098"(sulfonylurea receptor binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0021955"(central nervous system neuron axonogenesis)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030235"(nitric-oxide synthase regulator activity)|go:"GO:0030911"(TPR domain binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034605"(cellular response to heat)|go:"GO:0036126"(sperm flagellum)|go:"GO:0042026"(protein refolding)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0042470"(melanosome)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043209"(myelin sheath)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0044294"(dendritic growth cone)|go:"GO:0044295"(axonal growth cone)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045040"(protein insertion into mitochondrial outer membrane)|dip:DIP-30975N|entrezgene/locuslink:15519(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:1.2857471810131396 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:t9XAeXdXezYOtJX0wp3IY9/ZMkQ10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:P25799 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-643958|uniprotkb:B2RRQ6|uniprotkb:Q3TZE8|uniprotkb:Q3V2V6|uniprotkb:Q6TDG8|uniprotkb:Q75ZL1|uniprotkb:Q80Y21|uniprotkb:Q8C712|ensembl:ENSMUSP00000029812|ensembl:ENSMUSP00000128345 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:nfkb1_mouse(display_long)|uniprotkb:DNA-binding factor KBF1(gene name synonym)|uniprotkb:EBP-1(gene name synonym)|uniprotkb:NF-kappa-B1 p84/NF-kappa-B1 p98(gene name synonym)|uniprotkb:Nfkb1(gene name)|psi-mi:Nfkb1(display_short)|uniprotkb:Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_032715.2|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048535"(lymph node development)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071260"(cellular response to mechanical stimulus)|go:"GO:0071316"(cellular response to nicotine)|go:"GO:0071322"(cellular response to carbohydrate stimulus)|go:"GO:0071345"(cellular response to cytokine stimulus)|go:"GO:0071347"(cellular response to interleukin-1)|go:"GO:0071354"(cellular response to interleukin-6)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071359"(cellular response to dsRNA)|go:"GO:0071407"(cellular response to organic cyclic compound)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:1900127"(positive regulation of hyaluronan biosynthetic process)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|rcsb pdb:1U3Y|rcsb pdb:1U3Z|rcsb pdb:1U41|rcsb pdb:1U42|rcsb pdb:1VKX|rcsb pdb:2I9T|rcsb pdb:2V2T|rcsb pdb:3JV4|reactome:R-MMU-1169091|reactome:R-MMU-1810476|reactome:R-MMU-193692|reactome:R-MMU-202424|reactome:R-MMU-209560|reactome:R-MMU-2871837|reactome:R-MMU-3134963|reactome:R-MMU-3214841|reactome:R-MMU-445989|reactome:R-MMU-448706|reactome:R-MMU-5607764|reactome:R-MMU-5621575|rcsb pdb:1U3J|reactome:R-MMU-5684264|reactome:R-MMU-6798695|ensembl:ENSMUSG00000028163(gene)|ensembl:ENSMUST00000029812(transcript)|ensembl:ENSMUST00000164430(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001223"(transcription coactivator binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001818"(negative regulation of cytokine production)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006915"(apoptotic process)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0007165"(signal transduction)|refseq:XP_006501169.1|go:"GO:1902895"(positive regulation of miRNA transcription)|go:"GO:1904385"(cellular response to angiotensin)|go:"GO:1904630"(cellular response to diterpene)|go:"GO:1904632"(cellular response to glucoside)|go:"GO:1990416"(cellular response to brain-derived neurotrophic factor stimulus)|go:"GO:2000630"(positive regulation of miRNA metabolic process)|go:"GO:2000637"(positive regulation of gene silencing by miRNA)|interpro:IPR000451(NF-kappa-B/Rel/dorsal)|interpro:IPR000488(Death)|interpro:IPR002110(Ankyrin)|interpro:IPR002909(Cell surface receptor IPT/TIG)|interpro:IPR008967(p53-like transcription factor, DNA-binding)|interpro:IPR011029(DEATH-like)|interpro:IPR011539(Rel homology)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR020683|interpro:IPR030492|interpro:IPR030503|interpro:IPR032397|interpro:IPR033926|interpro:IPR036770|interpro:IPR037059|mint:P25799|rcsb pdb:1BFS|rcsb pdb:1IKN|rcsb pdb:1LE5|rcsb pdb:1LE9|go:"GO:1901653"(cellular response to peptide)|rcsb pdb:1LEI|rcsb pdb:1NFK|rcsb pdb:1OOA|rcsb pdb:1U36|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010956"(negative regulation of calcidiol 1-monooxygenase activity)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0019899"(enzyme binding)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0032695"(negative regulation of interleukin-12 production)|go:"GO:0032991"(protein-containing complex)|go:"GO:0035994"(response to muscle stretch)|go:"GO:0042802"(identical protein binding)|go:"GO:0042805"(actinin binding)|go:"GO:0043005"(neuron projection)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0010628"(positive regulation of gene expression)|reactome:R-MMU-933542|reactome:R-MMU-9020702|dip:DIP-85N|entrezgene/locuslink:18033(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:2.4900976225369007 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:OiCZGnyznh4scSRI6QeIuv4pHbA10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q9QXD8 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-1565949|uniprotkb:Q8C8G4|uniprotkb:Q9CW55|ensembl:ENSMUSP00000026269 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:limd1_mouse(display_long)|uniprotkb:Limd1(gene name)|psi-mi:Limd1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_038888.2|dip:DIP-38453N|ensembl:ENSMUSG00000025239(gene)|ensembl:ENSMUST00000026269(transcript)|go:"GO:0000932"(P-body)|go:"GO:0001666"(response to hypoxia)|go:"GO:0002076"(osteoblast development)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005912"(adherens junction)|go:"GO:0005925"(focal adhesion)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0016310"(phosphorylation)|go:"GO:0016442"(RISC complex)|go:"GO:0016477"(cell migration)|go:"GO:0033962"(P-body assembly)|go:"GO:0035195"(gene silencing by miRNA)|go:"GO:0035331"(negative regulation of hippo signaling)|go:"GO:0045668"(negative regulation of osteoblast differentiation)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:2000637"(positive regulation of gene silencing by miRNA)|interpro:IPR001781(Zinc finger, LIM-type)|interpro:IPR028734|mint:Q9QXD8|reactome:R-MMU-1234176|entrezgene/locuslink:29806(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:3.0873640487023826 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:l5HpR5SwbKwqzy6a/WUkwnKVkck10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35292 uniprotkb:Q8R326 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 intact:EBI-309927|uniprotkb:Q3TUK2|uniprotkb:Q9CYH1|uniprotkb:Q9D0M8|ensembl:ENSMUSP00000022507 psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:pspc1_mouse(display_long)|uniprotkb:Pspc1(gene name)|psi-mi:Pspc1(display_short)|uniprotkb:Psp1(gene name synonym)|uniprotkb:Paraspeckle protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567134|imex:IM-24977-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) refseq:NP_079958.3|ensembl:ENSMUSG00000021938(gene)|ensembl:ENSMUST00000022507(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001650"(fibrillar center)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0045087"(innate immune response)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0048511"(rhythmic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034522|interpro:IPR034523|interpro:IPR035979|mint:Q8R326|entrezgene/locuslink:66645(identity) - comment:mint|function:Might be involved in transcellular transport author-confidence:2.2385888375795893 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 rogid:ytx7HwtwAo7SxG0MsNz1YR1dKiQ10090 intact-crc:EECD85B52D0C4535|rigid:rlZTS/2RT+AYn/iWOEHiIhEUc1k false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:P11499 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-492813|uniprotkb:O89078|uniprotkb:Q3UIQ7|ensembl:ENSMUSP00000024739 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:hs90b_mouse(display_long)|uniprotkb:Heat shock 84 kDa(gene name synonym)|uniprotkb:Tumor-specific transplantation 84 kDa antigen(gene name synonym)|uniprotkb:Hsp90ab1(gene name)|psi-mi:Hsp90ab1(display_short)|uniprotkb:Hsp84(gene name synonym)|uniprotkb:Hsp84-1(gene name synonym)|uniprotkb:Hspcb(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_032328.2|go:"GO:0009651"(response to salt stress)|go:"GO:0009986"(cell surface)|go:"GO:0010033"(response to organic substance)|go:"GO:0016234"(inclusion body)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017098"(sulfonylurea receptor binding)|go:"GO:0019062"(virion attachment to host cell)|go:"GO:0019900"(kinase binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0021955"(central nervous system neuron axonogenesis)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030235"(nitric-oxide synthase regulator activity)|go:"GO:0030511"(positive regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031526"(brush border membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032092"(positive regulation of protein binding)|go:"GO:0032435"(negative regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0032516"(positive regulation of phosphoprotein phosphatase activity)|go:"GO:0032564"(dATP binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:1901799"(negative regulation of proteasomal protein catabolic process)|go:"GO:1903660"(negative regulation of complement-dependent cytotoxicity)|go:"GO:1903827"|go:"GO:1904031"(positive regulation of cyclin-dependent protein kinase activity)|go:"GO:1905323"(telomerase holoenzyme complex assembly)|go:"GO:1990226"(histone methyltransferase binding)|go:"GO:1990565"(HSP90-CDC37 chaperone complex)|go:"GO:1990913"(sperm head plasma membrane)|go:"GO:1990917"(ooplasm)|go:"GO:2000010"(positive regulation of protein localization to cell surface)|interpro:IPR001404(Heat shock protein Hsp90)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR019805|interpro:IPR020568|interpro:IPR020575|interpro:IPR036890|interpro:IPR037196|mint:P11499|reactome:R-MMU-168928|reactome:R-MMU-2029482|reactome:R-MMU-3371497|reactome:R-MMU-3371511|reactome:R-MMU-3371568|reactome:R-MMU-3371571|reactome:R-MMU-399954|reactome:R-MMU-6798695|reactome:R-MMU-844456|reactome:R-MMU-8852276|reactome:R-MMU-8937144|reactome:R-MMU-8939211|reactome:R-MMU-9013418|reactome:R-MMU-9018519|ensembl:ENSMUSG00000023944(gene)|ensembl:ENSMUST00000024739(transcript)|go:"GO:0001890"(placenta development)|go:"GO:0002134"(UTP binding)|go:"GO:0002135"(CTP binding)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0007004"(telomere maintenance via telomerase)|go:"GO:0008180"(COP9 signalosome)|go:"GO:0034605"(cellular response to heat)|go:"GO:0034751"(aryl hydrocarbon receptor complex)|go:"GO:0042220"(response to cocaine)|go:"GO:0042277"(peptide binding)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0042470"(melanosome)|go:"GO:0042493"|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0043008"(ATP-dependent protein binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0044294"(dendritic growth cone)|go:"GO:0044295"(axonal growth cone)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045597"(positive regulation of cell differentiation)|go:"GO:0045793"(positive regulation of cell size)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0048156"(tau protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048675"(axon extension)|go:"GO:0050821"(protein stabilization)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051248"(negative regulation of protein metabolic process)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:0060334"(regulation of interferon-gamma-mediated signaling pathway)|go:"GO:0060338"(regulation of type I interferon-mediated signaling pathway)|go:"GO:0070182"(DNA polymerase binding)|go:"GO:0071353"(cellular response to interleukin-4)|go:"GO:0071407"(cellular response to organic cyclic compound)|go:"GO:0071902"(positive regulation of protein serine/threonine kinase activity)|go:"GO:0097435"(supramolecular fiber organization)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0120293"(dynein axonemal particle)|go:"GO:1901389"(negative regulation of transforming growth factor beta activation)|dip:DIP-461N|entrezgene/locuslink:15516(identity) - - author-confidence:1.0167452371304793 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:5/MXDESVXdwuWna0s87Ap19aLMA10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:P50427 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-8399861|intact:MINT-1851563 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:sts_mouse(display_long)|uniprotkb:Sts(gene name)|psi-mi:Sts(display_short)|uniprotkb:Steroid sulfatase(gene name synonym)|uniprotkb:Steryl-sulfate sulfohydrolase(gene name synonym)|uniprotkb:Arylsulfatase C(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_033319.1|interpro:IPR024607|interpro:IPR017850(Alkaline-phosphatase-like, core domain)|mint:P50427|go:"GO:0004065"(arylsulfatase activity)|go:"GO:0004773"(steryl-sulfatase activity)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0007565"(female pregnancy)|go:"GO:0008202"(steroid metabolic process)|go:"GO:0008484"(sulfuric ester hydrolase activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0046872"(metal ion binding)|interpro:IPR000917(Sulphatase)|entrezgene/locuslink:20905(identity) - - function:Conversion of sulfated steroid precursors to estrogens during pregnancy|comment:mint|author-confidence:2.029920441827214 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:hjJ5UooNCWn6I2XGHn299X4bKVU10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:Q91YM4 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-8353709|intact:MINT-4121960|uniprotkb:Q6ZQ19|uniprotkb:Q8C6D1|uniprotkb:Q3TKZ4|uniprotkb:O89082|ensembl:ENSMUSP00000000394|ensembl:ENSMUSP00000114256|ensembl:ENSMUSP00000140835 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:fakd4_mouse(display_long)|uniprotkb:Tbrg4(gene name)|psi-mi:Tbrg4(display_short)|uniprotkb:Kiaa0948(gene name synonym)|uniprotkb:Transforming growth factor beta regulator 4(gene name synonym)|uniprotkb:Protein TBRG4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_001123929.1|refseq:NP_598772.1|refseq:XP_006514670.1|refseq:XP_006514671.1|ensembl:ENSMUSG00000000384(gene)|ensembl:ENSMUST00000000394(transcript)|ensembl:ENSMUST00000156969(transcript)|ensembl:ENSMUST00000189268(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0016071"(mRNA metabolic process)|go:"GO:0044528"(regulation of mitochondrial mRNA stability)|go:"GO:0090615"(mitochondrial mRNA processing)|interpro:IPR010622(FAST kinase leucine-rich)|interpro:IPR013579(FAST kinase-like protein, subdomain 2)|interpro:IPR013584(RAP domain)|interpro:IPR016024(Armadillo-type fold)|mint:Q91YM4|entrezgene/locuslink:21379(identity) - - comment:mint|function:May play a role in cell cycle progression|author-confidence:1.8367816871616278 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:in3JOCGu68ilWk/IHs5nqyhJwr010090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:Q9CZ44 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-7961368|uniprotkb:Q8BYL3|uniprotkb:Q80Y15|intact:MINT-1869876|uniprotkb:A2AT03|ensembl:ENSMUSP00000028949 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:nsf1c_mouse(display_long)|uniprotkb:Nsfl1c(gene name)|psi-mi:Nsfl1c(display_short)|uniprotkb:p97 cofactor p47(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_938085.1|refseq:NP_001278003.1|ensembl:ENSMUSG00000027455(gene)|ensembl:ENSMUST00000028949(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000132"(establishment of mitotic spindle orientation)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0005795"(Golgi stack)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0007030"(Golgi organization)|go:"GO:0031468"(nuclear membrane reassembly)|go:"GO:0031616"(spindle pole centrosome)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0045111"(intermediate filament cytoskeleton)|go:"GO:0046604"(positive regulation of mitotic centrosome separation)|go:"GO:0051117"(ATPase binding)|go:"GO:0061025"(membrane fusion)|go:"GO:1904780"(negative regulation of protein localization to centrosome)|go:"GO:1990730"(VCP-NSFL1C complex)|interpro:IPR001012(UBX)|interpro:IPR009060(UBA-like)|interpro:IPR012989(SEP)|interpro:IPR029071|interpro:IPR036241|mint:Q9CZ44|reactome:R-MMU-9013407|entrezgene/locuslink:386649(identity) - - comment:mint|comment:homomint|function:"Reduces the ATPase activity of VCP. Necessary for the fragmentation of Golgi stacks during mitosis and for VCP-mediated reassembly of Golgi stacks after mitosis. May play a role in VCP-mediated formation of transitional endoplasmic reticulum (tER)"|author-confidence:1.8910461801545466 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:b61FAzDFIfQboD05Rm+7tvW2DQY10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:P40142 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-494230|uniprotkb:Q3U7Y1|uniprotkb:Q3UK62|uniprotkb:Q545A1|uniprotkb:Q9ESA0|ensembl:ENSMUSP00000022529 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:tkt_mouse(display_long)|uniprotkb:P68(gene name synonym)|uniprotkb:Tkt(gene name)|psi-mi:Tkt(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_033414.1|ensembl:ENSMUSG00000021957(gene)|ensembl:ENSMUST00000022529(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004802"(transketolase activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005777"(peroxisome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006098"(pentose-phosphate shunt)|go:"GO:0009052"(pentose-phosphate shunt, non-oxidative branch)|go:"GO:0016604"(nuclear body)|go:"GO:0030246"(carbohydrate binding)|go:"GO:0030976"(thiamine pyrophosphate binding)|go:"GO:0040008"(regulation of growth)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043209"(myelin sheath)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046166"(glyceraldehyde-3-phosphate biosynthetic process)|go:"GO:0046390"(ribose phosphate biosynthetic process)|go:"GO:0048029"(monosaccharide binding)|interpro:IPR005474(Transketolase, N-terminal)|interpro:IPR005475(Transketolase, central region)|interpro:IPR009014(Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II)|interpro:IPR020826|interpro:IPR029061|interpro:IPR033248|mint:P40142|reactome:R-MMU-163754|reactome:R-MMU-71336|entrezgene/locuslink:21881(identity) - - author-confidence:2.0286709304754034 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:h2YT3KKVrgDmPcSbJmtevBv1CAI10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:P68040 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-296749|ensembl:ENSMUSP00000020640|uniprotkb:P25388|uniprotkb:P99049|intact:EBI-1183965|uniprotkb:Q3THP0|uniprotkb:Q3THY7|uniprotkb:Q3TKQ0|uniprotkb:Q3TW88|uniprotkb:Q5NCC5|uniprotkb:Q5NCC6|uniprotkb:Q9CSQ0|uniprotkb:Q9ERM6 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:rack1_mouse(display_long)|uniprotkb:p205(gene name synonym)|uniprotkb:Receptor of activated protein kinase C 1(gene name synonym)|uniprotkb:12-3(gene name synonym)|uniprotkb:Gnb2-rs1(gene name synonym)|uniprotkb:Gnb2l1(gene name synonym)|uniprotkb:Guanine nucleotide-binding protein subunit beta-2-like 1(gene name synonym)|uniprotkb:Rack1(gene name)|psi-mi:Rack1(display_short)|uniprotkb:Receptor for activated C kinase(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) go:"GO:1903076"(regulation of protein localization to plasma membrane)|go:"GO:1903208"(negative regulation of hydrogen peroxide-induced neuron death)|go:"GO:1990630"(IRE1-RACK1-PP2A complex)|go:"GO:2000114"(regulation of establishment of cell polarity)|go:"GO:2000543"(positive regulation of gastrulation)|go:"GO:2001244"(positive regulation of intrinsic apoptotic signaling pathway)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|mint:P68040|reactome:R-MMU-5357905|reactome:R-MMU-5357956|reactome:R-MMU-5626978|go:"GO:0072344"(rescue of stalled ribosome)|ensembl:ENSMUSG00000020372(gene)|ensembl:ENSMUST00000020640(transcript)|go:"GO:0001891"(phagocytic cup)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0005080"(protein kinase C binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006919"(activation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0007049"(cell cycle)|go:"GO:0007369"(gastrulation)|go:"GO:0008104"(protein localization)|go:"GO:0008200"(ion channel inhibitor activity)|go:"GO:0008656"(cysteine-type endopeptidase activator activity involved in apoptotic process)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0015935"(small ribosomal subunit)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019899"(enzyme binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0030178"(negative regulation of Wnt signaling pathway)|go:"GO:0030292"(protein tyrosine kinase inhibitor activity)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0030332"(cyclin binding)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0031334"(positive regulation of protein-containing complex assembly)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032436"(positive regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0006412"(translation)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0038023"(signaling receptor activity)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042998"(positive regulation of Golgi to plasma membrane protein transport)|go:"GO:0043005"(neuron projection)|go:"GO:0043022"(ribosome binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043204"(perikaryon)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0043473"(pigmentation)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0033137"(negative regulation of peptidyl-serine phosphorylation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0044297"(cell body)|go:"GO:0045879"(negative regulation of smoothened signaling pathway)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048511"(rhythmic process)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051302"(regulation of cell division)|go:"GO:0051343"(positive regulation of cyclic-nucleotide phosphodiesterase activity)|go:"GO:0051434"(BH3 domain binding)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051898"(negative regulation of protein kinase B signaling)|go:"GO:0051901"(positive regulation of mitochondrial depolarization)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0071363"(cellular response to growth factor stimulus)|refseq:NP_032169.1|entrezgene/locuslink:14694(identity) - - author-confidence:3.558072825091616 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:LXHlhPtxUzHJNncoPteGw2iXsFg10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:P47738 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-2308120|ensembl:ENSMUSP00000031411 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:aldh2_mouse(display_long)|uniprotkb:Aldh2(gene name)|psi-mi:Aldh2(display_short)|uniprotkb:Ahd-1(gene name synonym)|uniprotkb:Ahd1(gene name synonym)|uniprotkb:ALDH class 2(gene name synonym)|uniprotkb:AHD-M1(gene name synonym)|uniprotkb:ALDHI(gene name synonym)|uniprotkb:ALDH-E2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_033786.1|ensembl:ENSMUSG00000029455(gene)|ensembl:ENSMUST00000031411(transcript)|go:"GO:0004029"("aldehyde dehydrogenase (NAD+) activity")|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006068"(ethanol catabolic process)|go:"GO:0006117"(acetaldehyde metabolic process)|go:"GO:0008631"(intrinsic apoptotic signaling pathway in response to oxidative stress)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043878"("glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity")|go:"GO:0048149"(behavioral response to ethanol)|go:"GO:0050727"(regulation of inflammatory response)|go:"GO:0051287"(NAD binding)|go:"GO:0070404"(NADH binding)|go:"GO:0110095"(cellular detoxification of aldehyde)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016160(Aldehyde dehydrogenase, conserved site)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR029510|mint:P47738|reactome:R-MMU-380612|reactome:R-MMU-71384|entrezgene/locuslink:11669(identity) - - author-confidence:1.492273557305268 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:C4L2qigIlQeaZH4RsNocJovkPMw10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:P52480 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-647785|uniprotkb:Q3TBV8|uniprotkb:Q3TBW5|uniprotkb:Q3TC59|uniprotkb:Q3U1X3|uniprotkb:Q3U5P6|uniprotkb:Q4VC20|uniprotkb:Q64484|uniprotkb:Q91YI8|uniprotkb:Q9CWB1|ensembl:ENSMUSP00000034834 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:kpym_mouse(display_long)|uniprotkb:Pkm(gene name)|psi-mi:Pkm(display_short)|uniprotkb:Pk3(gene name synonym)|uniprotkb:Pkm2(gene name synonym)|uniprotkb:Pykm(gene name synonym)|uniprotkb:Pyruvate kinase muscle isozyme(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_035229.2|refseq:XP_006510918.1|refseq:NP_001240812.1|refseq:XP_011240975.1|dip:DIP-40536N|ensembl:ENSMUSG00000032294(gene)|ensembl:ENSMUST00000034834(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0001889"(liver development)|go:"GO:0003729"(mRNA binding)|go:"GO:0004743"(pyruvate kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005791"(rough endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005929"(cilium)|go:"GO:0006006"(glucose metabolic process)|go:"GO:0006096"(glycolytic process)|go:"GO:0006754"(ATP biosynthetic process)|go:"GO:0012501"(programmed cell death)|go:"GO:0016301"(kinase activity)|go:"GO:0030955"(potassium ion binding)|go:"GO:0031100"(animal organ regeneration)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0042802"(identical protein binding)|go:"GO:0042866"(pyruvate biosynthetic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0043403"(skeletal muscle tissue regeneration)|go:"GO:0043531"(ADP binding)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070324"(thyroid hormone binding)|go:"GO:1902912"(pyruvate kinase complex)|go:"GO:1903672"(positive regulation of sprouting angiogenesis)|go:"GO:2000767"(positive regulation of cytoplasmic translation)|interpro:IPR001697(Pyruvate kinase)|interpro:IPR011037(Pyruvate kinase, beta-barrel-like)|interpro:IPR015793(Pyruvate kinase, barrel)|interpro:IPR015795(Pyruvate kinase, C-terminal-like)|interpro:IPR015806(Pyruvate kinase, beta-barrel)|interpro:IPR015813(Pyruvate/Phosphoenolpyruvate kinase, catalytic core)|interpro:IPR018209|interpro:IPR036918|interpro:IPR040442|mint:P52480|reactome:R-MMU-6798695|reactome:R-MMU-70171|entrezgene/locuslink:18746(identity) - - author-confidence:7.704308493642665 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:SWQx3aPATcnlExhyy8afjcrB+xo10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:Q8C147 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-11566633|uniprotkb:Q9DBQ2|uniprotkb:Q6PIS0|uniprotkb:Q7TMQ5|uniprotkb:Q6KAM7|uniprotkb:Q8CAP6|uniprotkb:Q8K105|ensembl:ENSMUSP00000025831 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:dock8_mouse(display_long)|uniprotkb:Dock8(gene name)|psi-mi:Dock8(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_083061.2|ensembl:ENSMUSG00000052085(gene)|ensembl:ENSMUST00000025831(transcript)|go:"GO:0001771"(immunological synapse formation)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0031252"(cell leading edge)|go:"GO:0031256"(leading edge membrane)|go:"GO:0031258"(lamellipodium membrane)|go:"GO:0036336"(dendritic cell migration)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0061485"(memory T cell proliferation)|go:"GO:0070233"(negative regulation of T cell apoptotic process)|go:"GO:1903905"(positive regulation of establishment of T cell polarity)|go:"GO:1990869"(cellular response to chemokine)|go:"GO:2000406"(positive regulation of T cell migration)|interpro:IPR010703(Dedicator of cytokinesis)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021816|interpro:IPR026791|interpro:IPR027007|interpro:IPR027357|interpro:IPR035892|interpro:IPR037808|interpro:IPR043161|interpro:IPR043162|rcsb pdb:3VHL|rcsb pdb:7CLX|rcsb pdb:7CLY|reactome:R-MMU-9013148|reactome:R-MMU-9013149|reactome:R-MMU-9013409|reactome:R-MMU-983231|entrezgene/locuslink:76088(identity) - - author-confidence:5.5033834982390815 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:xAjdT7y7XRy54NjvlQ6tt8Rm9ko10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:Q3V3R1 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-912208|uniprotkb:Q3TVQ0|uniprotkb:Q3V402|uniprotkb:Q8CAL0|uniprotkb:Q8K2N5|uniprotkb:Q80V98|ensembl:ENSMUSP00000036178|ensembl:ENSMUSP00000112870|ensembl:ENSMUSP00000112897 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:c1tm_mouse(display_long)|uniprotkb:Formyltetrahydrofolate synthetase(gene name synonym)|uniprotkb:Mthfd1l(gene name)|psi-mi:Mthfd1l(display_short)|uniprotkb:Fthfsdc1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_001164256.1|refseq:NP_001164257.1|refseq:NP_758512.3|ensembl:ENSMUSG00000040675(gene)|ensembl:ENSMUST00000043735(transcript)|ensembl:ENSMUST00000117291(transcript)|ensembl:ENSMUST00000120585(transcript)|go:"GO:0001843"(neural tube closure)|go:"GO:0004329"(formate-tetrahydrofolate ligase activity)|go:"GO:0004488"("methylenetetrahydrofolate dehydrogenase (NADP+) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006760"(folic acid-containing compound metabolic process)|go:"GO:0009257"(10-formyltetrahydrofolate biosynthetic process)|go:"GO:0015942"(formate metabolic process)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048702"(embryonic neurocranium morphogenesis)|go:"GO:0048703"(embryonic viscerocranium morphogenesis)|interpro:IPR000559(Formate-tetrahydrofolate ligase, FTHFS)|interpro:IPR000672(Tetrahydrofolate dehydrogenase/cyclohydrolase)|interpro:IPR020628|interpro:IPR020630|interpro:IPR020631|interpro:IPR027417|interpro:IPR036291|mint:Q3V3R1|rcsb pdb:2EO2|reactome:R-MMU-196757|entrezgene/locuslink:270685(identity) - - author-confidence:3.332982280144015 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:Hh58kyg8+iN4T2flIZSrUkUf1MI10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:Q8VDD5 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-400906|intact:EBI-777674|uniprotkb:Q3UHT9|uniprotkb:Q3UHU4|uniprotkb:Q6KAN6|uniprotkb:Q811I2|ensembl:ENSMUSP00000016771 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:myh9_mouse(display_long)|uniprotkb:Myh9(gene name)|psi-mi:Myh9(display_short)|uniprotkb:Myosin heavy chain 9(gene name synonym)|uniprotkb:Myosin heavy chain, non-muscle IIa(gene name synonym)|uniprotkb:Non-muscle myosin heavy chain IIa(gene name synonym)|uniprotkb:Cellular myosin heavy chain, type A(gene name synonym)|uniprotkb:Non-muscle myosin heavy chain A(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_071855.2|ensembl:ENSMUSG00000022443(gene)|ensembl:ENSMUST00000016771(transcript)|go:"GO:0000146"(microfilament motor activity)|go:"GO:0000212"(meiotic spindle organization)|go:"GO:0000904"(cell morphogenesis involved in differentiation)|go:"GO:0001525"(angiogenesis)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0001725"(stress fiber)|go:"GO:0001726"(ruffle)|go:"GO:0001768"(establishment of T cell polarity)|go:"GO:0001772"(immunological synapse)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0001931"(uropod)|go:"GO:0003779"(actin binding)|go:"GO:0005178"(integrin binding)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005819"(spindle)|go:"GO:0005826"(actomyosin contractile ring)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005903"(brush border)|go:"GO:0005912"(adherens junction)|go:"GO:0005938"(cell cortex)|go:"GO:0006509"(membrane protein ectodomain proteolysis)|go:"GO:0006911"(phagocytosis, engulfment)|go:"GO:0007155"(cell adhesion)|go:"GO:0007520"(myoblast fusion)|go:"GO:0008180"(COP9 signalosome)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0016459"(myosin complex)|go:"GO:0016460"(myosin II complex)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030048"(actin filament-based movement)|go:"GO:0030220"(platelet formation)|go:"GO:0030224"(monocyte differentiation)|go:"GO:0030863"(cortical cytoskeleton)|go:"GO:0031032"(actomyosin structure organization)|go:"GO:0031252"(cell leading edge)|go:"GO:0031532"(actin cytoskeleton reorganization)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032418"(lysosome localization)|go:"GO:0032506"(cytokinetic process)|go:"GO:0032796"(uropod organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042641"(actomyosin)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043495"(protein-membrane adaptor activity)|go:"GO:0043531"(ADP binding)|go:"GO:0043534"(blood vessel endothelial cell migration)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0051015"(actin filament binding)|go:"GO:0051295"(establishment of meiotic spindle localization)|go:"GO:0060471"(cortical granule exocytosis)|go:"GO:0060473"(cortical granule)|go:"GO:0097513"(myosin II filament)|go:"GO:0098609"(cell-cell adhesion)|go:"GO:1903919"(negative regulation of actin filament severing)|go:"GO:1903923"(positive regulation of protein processing in phagocytic vesicle)|go:"GO:1905684"(regulation of plasma membrane repair)|interpro:IPR000048(IQ calmodulin-binding region)|interpro:IPR001609(Myosin head, motor region)|interpro:IPR002928(Myosin tail)|interpro:IPR004009(Myosin, N-terminal, SH3-like)|interpro:IPR008989(Myosin S1 fragment, N-terminal)|interpro:IPR027417|interpro:IPR036961|mint:Q8VDD5|reactome:R-MMU-2029482|reactome:R-MMU-5627123|dip:DIP-29546N|entrezgene/locuslink:17886(identity) - - caution:This sequence has been withdrawn from Uniprot.|crc64:AAAC0E83A0A4F24A|author-confidence:30.141783838106168 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:qYfcGuWOF9npzsKD3zXTuLeP9iE10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:Q66T02 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-9079953|uniprotkb:A2A8B6|uniprotkb:A2A8B7|uniprotkb:Q66T00|uniprotkb:Q6P3B1|uniprotkb:Q6ZQ62|uniprotkb:Q8R571|ensembl:ENSMUSP00000101286 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:pkhg5_mouse(display_long)|uniprotkb:Plekhg5(gene name)|psi-mi:Plekhg5(display_short)|uniprotkb:Kiaa0720(gene name synonym)|uniprotkb:Syx(gene name synonym)|uniprotkb:Synectin-binding RhoA exchange factor(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_001272928.1|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0007266"(Rho protein signal transduction)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030424"(axon)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043542"(endothelial cell migration)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0098793"(presynapse)|go:"GO:0099575"(regulation of protein catabolic process at presynapse, modulating synaptic transmission)|interpro:IPR000219("Dbl homology (DH) domain")|interpro:IPR001849(Pleckstrin-like)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR029071|interpro:IPR035899|interpro:IPR040181|reactome:R-MMU-193648|reactome:R-MMU-416482|reactome:R-MMU-8980692|reactome:R-MMU-9696264|reactome:R-MMU-9696273|ensembl:ENSMUSG00000039713(gene)|ensembl:ENSMUST00000105661(transcript)|entrezgene/locuslink:269608(identity) - - author-confidence:5.478750274446243 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:R3+p5/EaPub0slhY5cYxBK1eMIE10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:Q60865 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-647767|uniprotkb:Q6IMN3|uniprotkb:Q7TT26|uniprotkb:Q60758|uniprotkb:Q61620|ensembl:ENSMUSP00000028607|ensembl:ENSMUSP00000106777 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:capr1_mouse(display_long)|uniprotkb:Cytoplasmic activation- and proliferation-associated protein 1(gene name synonym)|uniprotkb:GPI-anchored membrane protein 1(gene name synonym)|uniprotkb:GPI-anchored protein p137(gene name synonym)|uniprotkb:Membrane component chromosome 11 surface marker 1(gene name synonym)|uniprotkb:Caprin1(gene name)|psi-mi:Caprin1(display_short)|uniprotkb:Gpiap(gene name synonym)|uniprotkb:Gpiap1(gene name synonym)|uniprotkb:Gpip137(gene name synonym)|uniprotkb:M11s1(gene name synonym)|uniprotkb:G5E5(orf name)|uniprotkb:Rng105(gene name synonym)|uniprotkb:RNA granule protein 105(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_001104759.1|refseq:NP_001104760.1|refseq:NP_001104761.1|refseq:NP_001104762.1|refseq:NP_058019.2|ensembl:ENSMUSG00000027184(gene)|ensembl:ENSMUST00000028607(transcript)|ensembl:ENSMUST00000111147(transcript)|go:"GO:0000932"(P-body)|go:"GO:0003723"(RNA binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030027"(lamellipodium)|go:"GO:0030425"(dendrite)|go:"GO:0031252"(cell leading edge)|go:"GO:0045202"(synapse)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0061003"(positive regulation of dendritic spine morphogenesis)|go:"GO:0098794"(postsynapse)|go:"GO:0098978"(glutamatergic synapse)|interpro:IPR022070|interpro:IPR028816|interpro:IPR041637|mint:Q60865|entrezgene/locuslink:53872(identity) - - author-confidence:11.469978704756533 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:e+Dcb+82jx+CoLhlGBbdSG62dPU10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:Q02819 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-1634689|uniprotkb:Q3TU42|uniprotkb:Q9CWA1|uniprotkb:Q9D8J4|uniprotkb:Q9DBL3|ensembl:ENSMUSP00000147383 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:nucb1_mouse(display_long)|uniprotkb:Nucb1(gene name)|psi-mi:Nucb1(display_short)|uniprotkb:Nuc(gene name synonym)|uniprotkb:Nucb(gene name synonym)|uniprotkb:CALNUC(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_001157134.1|refseq:NP_032775.1|refseq:XP_017177513.1|refseq:XP_006540759.1|ensembl:ENSMUSG00000030824(gene)|ensembl:ENSMUST00000211765(transcript)|go:"GO:0001965"(G-protein alpha-subunit binding)|go:"GO:0003677"(DNA binding)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005769"(early endosome)|go:"GO:0005791"(rough endoplasmic reticulum)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005798"(Golgi-associated vesicle)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0072718"(response to cisplatin)|go:"GO:0090498"(extrinsic component of Golgi membrane)|go:"GO:0098547"(lumenal side of Golgi membrane)|go:"GO:1903533"(regulation of protein targeting)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR018247|interpro:IPR040250|interpro:IPR040253|mint:Q02819|reactome:R-MMU-381426|reactome:R-MMU-8957275|go:"GO:0005794"(Golgi apparatus)|entrezgene/locuslink:18220(identity) - - author-confidence:1.1991738944948316 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:/Iqiy8TmMklf3hIyYKPce37SBP010090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:Q62384 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-11566629|ensembl:ENSMUSP00000117725 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:zpr1_mouse(display_long)|uniprotkb:Zfp259(gene name synonym)|uniprotkb:Zinc finger protein 259(gene name synonym)|uniprotkb:Znf259(gene name synonym)|uniprotkb:Zpr1(gene name)|psi-mi:Zpr1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_035882.1|ensembl:ENSMUSG00000032078(gene)|ensembl:ENSMUST00000156440(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0001833"(inner cell mass cell proliferation)|go:"GO:0001834"(trophectodermal cell proliferation)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006397"(mRNA processing)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008283"(cell population proliferation)|go:"GO:0008380"(RNA splicing)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0015030"(Cajal body)|go:"GO:0021510"(spinal cord development)|go:"GO:0030424"(axon)|go:"GO:0030426"(growth cone)|go:"GO:0030576"(Cajal body organization)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0031641"(regulation of myelination)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0042023"(DNA endoreduplication)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043204"(perikaryon)|go:"GO:0045927"(positive regulation of growth)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0061564"(axon development)|go:"GO:0071364"(cellular response to epidermal growth factor stimulus)|go:"GO:0071931"(positive regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0097504"(Gemini of coiled bodies)|go:"GO:1902742"(apoptotic process involved in development)|go:"GO:1990261"(pre-mRNA catabolic process)|go:"GO:2000672"(negative regulation of motor neuron apoptotic process)|interpro:IPR004457(Zinc finger, ZPR1-type)|interpro:IPR040141|interpro:IPR042451|interpro:IPR042452|rcsb pdb:2QKD|dip:DIP-46465N|entrezgene/locuslink:22687(identity) - - author-confidence:1.967980379101744 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:jeflVhdrQB7TsdkWMRpnmtqTgiA10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:P60670 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-10817650|uniprotkb:B1ATY4|uniprotkb:B1ATY5|ensembl:ENSMUSP00000035851 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:npl4_mouse(display_long)|uniprotkb:Nploc4(gene name)|psi-mi:Nploc4(display_short)|uniprotkb:Kiaa1499(gene name synonym)|uniprotkb:Npl4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_001181952.1|refseq:NP_955763.1|ensembl:ENSMUSG00000039703(gene)|ensembl:ENSMUST00000044271(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007030"(Golgi organization)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032480"(negative regulation of type I interferon production)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0036501"(UFD1-NPL4 complex)|go:"GO:0039536"(negative regulation of RIG-I signaling pathway)|go:"GO:0042175"(nuclear outer membrane-endoplasmic reticulum membrane network)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0051117"(ATPase binding)|interpro:IPR001876(Zinc finger, RanBP2-type)|interpro:IPR007716(NPL4, zinc-binding putative)|interpro:IPR007717(NPL4)|interpro:IPR016563(Polyubiquitin-tagged protein recognition complex, Npl4 component)|interpro:IPR024682|interpro:IPR029071|interpro:IPR036443|interpro:IPR037518|rcsb pdb:2PJH|reactome:R-MMU-110320|entrezgene/locuslink:217365(identity) - - author-confidence:1.025848819836528 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:fqIjvWF0u+4tteXKbd+grVH2L5010090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:O88342 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-6914976|ensembl:ENSMUSP00000005234 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:wdr1_mouse(display_long)|uniprotkb:Wdr1(gene name)|psi-mi:Wdr1(display_short)|uniprotkb:Actin-interacting protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) go:"GO:0045199"(maintenance of epithelial cell apical/basal polarity)|go:"GO:0045214"(sarcomere organization)|go:"GO:0048713"(regulation of oligodendrocyte differentiation)|go:"GO:0051015"(actin filament binding)|go:"GO:0060307"(regulation of ventricular cardiac muscle cell membrane repolarization)|go:"GO:1990266"(neutrophil migration)|interpro:IPR001680(WD40 repeat)|interpro:IPR011045(Nitrous oxide reductase, N-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|reactome:R-MMU-114608|ensembl:ENSMUSG00000005103(gene)|ensembl:ENSMUST00000005234(transcript)|go:"GO:0002102"(podosome)|go:"GO:0002446"(neutrophil mediated immunity)|go:"GO:0003779"(actin binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030042"(actin filament depolymerization)|go:"GO:0030043"(actin filament fragmentation)|go:"GO:0030054"(cell junction)|go:"GO:0030220"(platelet formation)|go:"GO:0030834"(regulation of actin filament depolymerization)|go:"GO:0030836"(positive regulation of actin filament depolymerization)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0030865"(cortical cytoskeleton organization)|go:"GO:0040011"(locomotion)|go:"GO:0042247"(establishment of planar polarity of follicular epithelium)|go:"GO:0042995"(cell projection)|go:"GO:0043209"(myelin sheath)|go:"GO:0043297"(apical junction assembly)|refseq:NP_035845.1|entrezgene/locuslink:22388(identity) - - author-confidence:1.88372761366537 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:PVIlQDv8eXQrI3QBWJOjKlj/Zig10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:P14206 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-1183792|ensembl:ENSMUSP00000035105|ensembl:ENSMUSP00000148933|uniprotkb:Q58E74|uniprotkb:Q8BHL0|uniprotkb:Q8BNL2|uniprotkb:Q91V31|uniprotkb:Q9CY13 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:rssa_mouse(display_long)|uniprotkb:Rpsa(gene name)|psi-mi:Rpsa(display_short)|uniprotkb:Lamr1(gene name synonym)|uniprotkb:Laminin receptor 1(gene name synonym)|uniprotkb:37/67 kDa laminin receptor(gene name synonym)|uniprotkb:Laminin-binding protein precursor p40(gene name synonym)|uniprotkb:37 kDa oncofetal antigen(gene name synonym)|uniprotkb:OFA/iLRP(gene name synonym)|uniprotkb:P40-8(gene name synonym)|uniprotkb:37 kDa laminin receptor precursor(gene name synonym)|uniprotkb:67 kDa laminin receptor(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) ensembl:ENSMUSG00000032518(gene)|refseq:NP_035159.3|ensembl:ENSMUST00000035105(transcript)|ensembl:ENSMUST00000217317(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005055"(laminin receptor activity)|go:"GO:0005604"(basement membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006412"(translation)|go:"GO:0015935"(small ribosomal subunit)|go:"GO:0016020"(membrane)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0030855"(epithelial cell differentiation)|go:"GO:0043022"(ribosome binding)|interpro:IPR005707(Ribosomal protein S2, eukaryotic/archaeal)|interpro:IPR018130|interpro:IPR023591|interpro:IPR027498|interpro:IPR027504|interpro:IPR032281|mint:P14206|reactome:R-MMU-156827|go:"GO:0043025"(neuronal cell body)|reactome:R-MMU-1799339|reactome:R-MMU-6791226|reactome:R-MMU-72649|reactome:R-MMU-72689|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-975956|reactome:R-MMU-975957|go:"GO:0043236"(laminin binding)|go:"GO:0045202"(synapse)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0098609"(cell-cell adhesion)|go:"GO:0098978"(glutamatergic synapse)|interpro:IPR001865(Ribosomal protein S2)|dip:DIP-38089N|entrezgene/locuslink:16785(identity) - - author-confidence:5.889125502705192 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:Qf5VO9t+mZnGd/vuxHsQyYBuYSQ10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:P97855 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-6666067|ensembl:ENSMUSP00000018727 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:g3bp1_mouse(display_long)|uniprotkb:G3bp1(gene name)|psi-mi:G3bp1(display_short)|uniprotkb:G3bp(gene name synonym)|uniprotkb:ATP-dependent DNA helicase VIII(gene name synonym)|uniprotkb:GAP SH3 domain-binding protein 1(gene name synonym)|uniprotkb:HDH-VIII(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) ensembl:ENSMUSG00000018583(gene)|ensembl:ENSMUST00000018727(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032481"(positive regulation of type I interferon production)|go:"GO:0033677"(DNA/RNA helicase activity)|go:"GO:0034063"(stress granule assembly)|go:"GO:0043204"(perikaryon)|go:"GO:0045087"(innate immune response)|go:"GO:0051607"(defense response to virus)|go:"GO:0062029"(positive regulation of stress granule assembly)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002075(Nuclear transport factor 2)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR018222|interpro:IPR032710|interpro:IPR034374|interpro:IPR034375|interpro:IPR035979|interpro:IPR039539|mint:P97855|refseq:NP_038744.1|entrezgene/locuslink:27041(identity) - - author-confidence:9.837402872805098 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:Xxq1G7S8hxbGPvterifIOxpri6U10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:P06151 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-444940|ensembl:ENSMUSP00000036386|ensembl:ENSMUSP00000103267 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:ldha_mouse(display_long)|uniprotkb:LDH muscle subunit(gene name synonym)|uniprotkb:Ldha(gene name)|psi-mi:Ldha(display_short)|uniprotkb:Ldh-1(gene name synonym)|uniprotkb:Ldh1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_034829.1|ensembl:ENSMUSG00000063229(gene)|ensembl:ENSMUST00000005051(transcript)|ensembl:ENSMUST00000048209(transcript)|go:"GO:0004457"(lactate dehydrogenase activity)|go:"GO:0004459"(L-lactate dehydrogenase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0019244"(lactate biosynthetic process from pyruvate)|go:"GO:0019661"(glucose catabolic process to lactate via pyruvate)|go:"GO:0031668"(cellular response to extracellular stimulus)|go:"GO:0035686"(sperm fibrous sheath)|go:"GO:0042802"(identical protein binding)|interpro:IPR001236(Lactate/malate dehydrogenase)|interpro:IPR001557(L-lactate/malate dehydrogenase)|interpro:IPR011304(L-lactate dehydrogenase)|interpro:IPR015955(Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal)|interpro:IPR018177|interpro:IPR022383|interpro:IPR036291|mint:P06151|reactome:R-MMU-70268|entrezgene/locuslink:16828(identity) - - author-confidence:4.20228517776084 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:IErFuOIWq53/XyIxWgUyVi76VnM10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:Q6ZQ08 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-682479|intact:EBI-2104684|uniprotkb:B2RY28|uniprotkb:Q3UPB7|uniprotkb:Q8BSB4|uniprotkb:Q8BXB2|uniprotkb:Q8C0H2|uniprotkb:Q8K3D8 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:cnot1_mouse(display_long)|uniprotkb:Cnot1(gene name)|psi-mi:Cnot1(display_short)|uniprotkb:Kiaa1007(gene name synonym)|uniprotkb:CCR4-associated factor 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_835179.1|refseq:XP_006530937.1|dip:DIP-46845N|mint:Q6ZQ08|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000288"(nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:0000932"(P-body)|go:"GO:0001829"(trophectodermal cell differentiation)|go:"GO:0004535"("poly(A)-specific ribonuclease activity")|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0010606"(positive regulation of cytoplasmic mRNA processing body assembly)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0030331"(estrogen receptor binding)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0035195"(gene silencing by miRNA)|go:"GO:0042974"(retinoic acid receptor binding)|go:"GO:0048387"(negative regulation of retinoic acid receptor signaling pathway)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0060213"("positive regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0061014"(positive regulation of mRNA catabolic process)|go:"GO:0070016"(armadillo repeat domain binding)|go:"GO:1900153"(positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:2000036"(regulation of stem cell population maintenance)|interpro:IPR007196(CCR4-Not complex component, Not1)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR024557|interpro:IPR032191|interpro:IPR032193|interpro:IPR032194|interpro:IPR038535|interpro:IPR040398|reactome:R-MMU-429947|reactome:R-MMU-6804115|entrezgene/locuslink:234594(identity) - - comment:AfCS Y2H protein 39306. Translated from nucleotide sequence.|author-confidence:1.4162318664665068 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:2Q4quoSuPlUbD4QkiAkc9Hr9avI10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:Q99P88 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-2551981|ensembl:ENSMUSP00000128819 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:nu155_mouse(display_long)|uniprotkb:Nucleoporin Nup155(gene name synonym)|uniprotkb:155 kDa nucleoporin(gene name synonym)|uniprotkb:Nup155(gene name)|psi-mi:Nup155(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) mint:Q99P88|reactome:R-MMU-159227|reactome:R-MMU-159230|reactome:R-MMU-159231|reactome:R-MMU-159236|reactome:R-MMU-170822|reactome:R-MMU-191859|reactome:R-MMU-3108214|reactome:R-MMU-3232142|reactome:R-MMU-3301854|reactome:R-MMU-3371453|reactome:R-MMU-4085377|reactome:R-MMU-4551638|reactome:R-MMU-4570464|reactome:R-MMU-4615885|reactome:R-MMU-5578749|reactome:R-MMU-9615933|interpro:IPR042538|ensembl:ENSMUSG00000022142(gene)|ensembl:ENSMUST00000163765(transcript)|go:"GO:0000972"(transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005737"(cytoplasm)|go:"GO:0006405"(RNA export from nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006998"(nuclear envelope organization)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031965"(nuclear membrane)|go:"GO:0036228"(protein localization to nuclear inner membrane)|go:"GO:0044611"(nuclear pore inner ring)|go:"GO:0086014"(atrial cardiac muscle cell action potential)|interpro:IPR004870(Nucleoporin, non-repetitive/WGA-negative)|interpro:IPR007187(Nucleoporin, Nup133-like, C-terminal)|interpro:IPR014908(Nup133, N-terminal)|interpro:IPR042533|interpro:IPR042537|refseq:NP_573490.3|entrezgene/locuslink:170762(identity) - - author-confidence:1.6664911400720075 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:VNP6KXs2IzDvHc7Q0re9FpjB/lo10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35294 uniprotkb:P63276 intact:EBI-6552478|ensembl:ENSMUSP00000031986|uniprotkb:O35697|uniprotkb:Q6GTV2 intact:EBI-11567327|uniprotkb:P06584|ensembl:ENSMUSP00000079628 psi-mi:rab19_mouse(display_long)|uniprotkb:Rab19(gene name)|psi-mi:Rab19(display_short) psi-mi:rs17_mouse(display_long)|uniprotkb:Rps17(gene name)|psi-mi:Rps17(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567325|imex:IM-24977-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUST00000031986(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|ensembl:ENSMUSG00000029923(gene)|refseq:NP_035356.1|dip:DIP-60515N|entrezgene/locuslink:19331(identity) refseq:NP_033118.1|ensembl:ENSMUSG00000061787(gene)|ensembl:ENSMUST00000080813(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0006412"(translation)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0034101"(erythrocyte homeostasis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0045202"(synapse)|interpro:IPR001210(Ribosomal protein S17e)|interpro:IPR018273|interpro:IPR036401|reactome:R-MMU-156827|reactome:R-MMU-1799339|reactome:R-MMU-6791226|reactome:R-MMU-72649|reactome:R-MMU-72689|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-975956|reactome:R-MMU-975957|entrezgene/locuslink:20068(identity) - - author-confidence:1.4647843075654343 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:laVcaDu7ZxcIYlutmPw3I5rUpqk10090 rogid:nmi2g3UTWDtbdrcMiTCzndEtS2g10090 intact-crc:621641538B4A92D9|rigid:FKx/Wse8Tb2/cFxj/IHL/I+53+A false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35293 uniprotkb:O35343 intact:EBI-8304813|ensembl:ENSMUSP00000157011|intact:MINT-1864434|uniprotkb:Q543V0 intact:EBI-8372758|intact:MINT-4098648|ensembl:ENSMUSP00000141227 psi-mi:rab18_mouse(display_long)|uniprotkb:Rab18(gene name)|psi-mi:Rab18(display_short) psi-mi:ima3_mouse(display_long)|uniprotkb:Kpna4(gene name)|psi-mi:Kpna4(display_short)|uniprotkb:Qip1(gene name synonym)|uniprotkb:Karyopherin subunit alpha-4(gene name synonym)|uniprotkb:Importin alpha Q1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567272|imex:IM-24977-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000073639(gene)|ensembl:ENSMUST00000234810(transcript)|go:"GO:0001654"(eye development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007420"(brain development)|go:"GO:0012505"(endomembrane system)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0034389"(lipid droplet organization)|go:"GO:0045202"(synapse)|go:"GO:0051170"(import into nucleus)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR025662|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_851415.1|entrezgene/locuslink:19330(identity) refseq:NP_032493.1|dip:DIP-62053N|ensembl:ENSMUSG00000027782(gene)|ensembl:ENSMUST00000194558(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006607"(NLS-bearing protein import into nucleus)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0061608"(nuclear import signal receptor activity)|interpro:IPR000225(Armadillo)|interpro:IPR002652(Importin-alpha-like, importin-beta-binding region)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR024931|interpro:IPR032413|interpro:IPR036975|mint:O35343|entrezgene/locuslink:16649(identity) - function:Plays a role in apical endocytosis/recycling. May be implicated in transport between the plasma membrane and early endosomes|comment:mint|comment:homomint comment:mint|function:"Functions in nuclear protein import as an adapter protein for nuclear receptor KPNB1. Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin-beta and the three components separate and importin-alpha and -beta are re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran from importin. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus"|author-confidence:1.0079986576678048 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:GBb4x3HIoXCUA2ikZcE28uJtGGM10090 rogid:FNkP/rMLdR4xUoOYLuHsT710FeA10090 intact-crc:8715072E2A1B88B3|rigid:VXKAPAuaWSPlqbVsfqGnR7umLvU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35293 uniprotkb:Q922I7 intact:EBI-8304813|ensembl:ENSMUSP00000157011|intact:MINT-1864434|uniprotkb:Q543V0 intact:EBI-8383945|intact:MINT-4122800|ensembl:ENSMUSP00000126192 psi-mi:rab18_mouse(display_long)|uniprotkb:Rab18(gene name)|psi-mi:Rab18(display_short) psi-mi:q922i7_mouse(display_long)|uniprotkb:Ptbp1(gene name)|psi-mi:Ptbp1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567272|imex:IM-24977-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000073639(gene)|ensembl:ENSMUST00000234810(transcript)|go:"GO:0001654"(eye development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007420"(brain development)|go:"GO:0012505"(endomembrane system)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0034389"(lipid droplet organization)|go:"GO:0045202"(synapse)|go:"GO:0051170"(import into nucleus)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR025662|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_851415.1|entrezgene/locuslink:19330(identity) refseq:NP_032982.2|refseq:NP_001070831.1|ensembl:ENSMUSG00000006498(gene)|ensembl:ENSMUST00000172282(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034798|interpro:IPR035000|interpro:IPR035001|interpro:IPR035979|mint:Q922I7|entrezgene/locuslink:19205(identity) - function:Plays a role in apical endocytosis/recycling. May be implicated in transport between the plasma membrane and early endosomes|comment:mint|comment:homomint comment:mint|author-confidence:1.2720025561432227 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:GBb4x3HIoXCUA2ikZcE28uJtGGM10090 rogid:wAzhI2yWLiaLfxmENQor0rKTxXo10090 intact-crc:8715072E2A1B88B3|rigid:VXKAPAuaWSPlqbVsfqGnR7umLvU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35293 uniprotkb:Q60865 intact:EBI-8304813|ensembl:ENSMUSP00000157011|intact:MINT-1864434|uniprotkb:Q543V0 intact:EBI-647767|uniprotkb:Q6IMN3|uniprotkb:Q7TT26|uniprotkb:Q60758|uniprotkb:Q61620|ensembl:ENSMUSP00000028607|ensembl:ENSMUSP00000106777 psi-mi:rab18_mouse(display_long)|uniprotkb:Rab18(gene name)|psi-mi:Rab18(display_short) psi-mi:capr1_mouse(display_long)|uniprotkb:Cytoplasmic activation- and proliferation-associated protein 1(gene name synonym)|uniprotkb:GPI-anchored membrane protein 1(gene name synonym)|uniprotkb:GPI-anchored protein p137(gene name synonym)|uniprotkb:Membrane component chromosome 11 surface marker 1(gene name synonym)|uniprotkb:Caprin1(gene name)|psi-mi:Caprin1(display_short)|uniprotkb:Gpiap(gene name synonym)|uniprotkb:Gpiap1(gene name synonym)|uniprotkb:Gpip137(gene name synonym)|uniprotkb:M11s1(gene name synonym)|uniprotkb:G5E5(orf name)|uniprotkb:Rng105(gene name synonym)|uniprotkb:RNA granule protein 105(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567272|imex:IM-24977-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000073639(gene)|ensembl:ENSMUST00000234810(transcript)|go:"GO:0001654"(eye development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007420"(brain development)|go:"GO:0012505"(endomembrane system)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0034389"(lipid droplet organization)|go:"GO:0045202"(synapse)|go:"GO:0051170"(import into nucleus)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR025662|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_851415.1|entrezgene/locuslink:19330(identity) refseq:NP_001104759.1|refseq:NP_001104760.1|refseq:NP_001104761.1|refseq:NP_001104762.1|refseq:NP_058019.2|ensembl:ENSMUSG00000027184(gene)|ensembl:ENSMUST00000028607(transcript)|ensembl:ENSMUST00000111147(transcript)|go:"GO:0000932"(P-body)|go:"GO:0003723"(RNA binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030027"(lamellipodium)|go:"GO:0030425"(dendrite)|go:"GO:0031252"(cell leading edge)|go:"GO:0045202"(synapse)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0061003"(positive regulation of dendritic spine morphogenesis)|go:"GO:0098794"(postsynapse)|go:"GO:0098978"(glutamatergic synapse)|interpro:IPR022070|interpro:IPR028816|interpro:IPR041637|mint:Q60865|entrezgene/locuslink:53872(identity) - function:Plays a role in apical endocytosis/recycling. May be implicated in transport between the plasma membrane and early endosomes|comment:mint|comment:homomint author-confidence:1.447826653505147 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:GBb4x3HIoXCUA2ikZcE28uJtGGM10090 rogid:e+Dcb+82jx+CoLhlGBbdSG62dPU10090 intact-crc:8715072E2A1B88B3|rigid:VXKAPAuaWSPlqbVsfqGnR7umLvU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35293 uniprotkb:Q8BHC1 intact:EBI-8304813|ensembl:ENSMUSP00000157011|intact:MINT-1864434|uniprotkb:Q543V0 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab18_mouse(display_long)|uniprotkb:Rab18(gene name)|psi-mi:Rab18(display_short) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567272|imex:IM-24977-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000073639(gene)|ensembl:ENSMUST00000234810(transcript)|go:"GO:0001654"(eye development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007420"(brain development)|go:"GO:0012505"(endomembrane system)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0034389"(lipid droplet organization)|go:"GO:0045202"(synapse)|go:"GO:0051170"(import into nucleus)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR025662|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_851415.1|entrezgene/locuslink:19330(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - function:Plays a role in apical endocytosis/recycling. May be implicated in transport between the plasma membrane and early endosomes|comment:mint|comment:homomint author-confidence:1.0797563095860725 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:GBb4x3HIoXCUA2ikZcE28uJtGGM10090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:8715072E2A1B88B3|rigid:VXKAPAuaWSPlqbVsfqGnR7umLvU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35293 uniprotkb:Q8CEE7 intact:EBI-8304813|ensembl:ENSMUSP00000157011|intact:MINT-1864434|uniprotkb:Q543V0 intact:EBI-11567274|uniprotkb:Q8CC07|ensembl:ENSMUSP00000008579 psi-mi:rab18_mouse(display_long)|uniprotkb:Rab18(gene name)|psi-mi:Rab18(display_short) psi-mi:rdh13_mouse(display_long)|uniprotkb:Rdh13(gene name)|psi-mi:Rdh13(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567272|imex:IM-24977-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000073639(gene)|ensembl:ENSMUST00000234810(transcript)|go:"GO:0001654"(eye development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007420"(brain development)|go:"GO:0012505"(endomembrane system)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0034389"(lipid droplet organization)|go:"GO:0045202"(synapse)|go:"GO:0051170"(import into nucleus)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR025662|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_851415.1|entrezgene/locuslink:19330(identity) refseq:NP_001277338.1|refseq:NP_001277340.1|refseq:NP_780581.1|ensembl:ENSMUSG00000008435(gene)|ensembl:ENSMUST00000008579(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0009644"(response to high light intensity)|go:"GO:0010842"(retina layer formation)|go:"GO:0042462"(eye photoreceptor cell development)|go:"GO:0042574"(retinal metabolic process)|go:"GO:0052650"(NADP-retinol dehydrogenase activity)|interpro:IPR002347(Glucose/ribitol dehydrogenase)|interpro:IPR020904|interpro:IPR036291|reactome:R-MMU-5365859|entrezgene/locuslink:108841(identity) - function:Plays a role in apical endocytosis/recycling. May be implicated in transport between the plasma membrane and early endosomes|comment:mint|comment:homomint author-confidence:12.214330467192294 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:GBb4x3HIoXCUA2ikZcE28uJtGGM10090 rogid:Q7cU4+flixa3fNk6xpG4WnE+JSg10090 intact-crc:8715072E2A1B88B3|rigid:VXKAPAuaWSPlqbVsfqGnR7umLvU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35293 uniprotkb:P60670 intact:EBI-8304813|ensembl:ENSMUSP00000157011|intact:MINT-1864434|uniprotkb:Q543V0 intact:EBI-10817650|uniprotkb:B1ATY4|uniprotkb:B1ATY5|ensembl:ENSMUSP00000035851 psi-mi:rab18_mouse(display_long)|uniprotkb:Rab18(gene name)|psi-mi:Rab18(display_short) psi-mi:npl4_mouse(display_long)|uniprotkb:Nploc4(gene name)|psi-mi:Nploc4(display_short)|uniprotkb:Kiaa1499(gene name synonym)|uniprotkb:Npl4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567272|imex:IM-24977-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000073639(gene)|ensembl:ENSMUST00000234810(transcript)|go:"GO:0001654"(eye development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007420"(brain development)|go:"GO:0012505"(endomembrane system)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0034389"(lipid droplet organization)|go:"GO:0045202"(synapse)|go:"GO:0051170"(import into nucleus)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR025662|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_851415.1|entrezgene/locuslink:19330(identity) refseq:NP_001181952.1|refseq:NP_955763.1|ensembl:ENSMUSG00000039703(gene)|ensembl:ENSMUST00000044271(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007030"(Golgi organization)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032480"(negative regulation of type I interferon production)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0036501"(UFD1-NPL4 complex)|go:"GO:0039536"(negative regulation of RIG-I signaling pathway)|go:"GO:0042175"(nuclear outer membrane-endoplasmic reticulum membrane network)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0051117"(ATPase binding)|interpro:IPR001876(Zinc finger, RanBP2-type)|interpro:IPR007716(NPL4, zinc-binding putative)|interpro:IPR007717(NPL4)|interpro:IPR016563(Polyubiquitin-tagged protein recognition complex, Npl4 component)|interpro:IPR024682|interpro:IPR029071|interpro:IPR036443|interpro:IPR037518|rcsb pdb:2PJH|reactome:R-MMU-110320|entrezgene/locuslink:217365(identity) - function:Plays a role in apical endocytosis/recycling. May be implicated in transport between the plasma membrane and early endosomes|comment:mint|comment:homomint author-confidence:1.025848819836528 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:GBb4x3HIoXCUA2ikZcE28uJtGGM10090 rogid:fqIjvWF0u+4tteXKbd+grVH2L5010090 intact-crc:8715072E2A1B88B3|rigid:VXKAPAuaWSPlqbVsfqGnR7umLvU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35293 uniprotkb:P52480 intact:EBI-8304813|ensembl:ENSMUSP00000157011|intact:MINT-1864434|uniprotkb:Q543V0 intact:EBI-647785|uniprotkb:Q3TBV8|uniprotkb:Q3TBW5|uniprotkb:Q3TC59|uniprotkb:Q3U1X3|uniprotkb:Q3U5P6|uniprotkb:Q4VC20|uniprotkb:Q64484|uniprotkb:Q91YI8|uniprotkb:Q9CWB1|ensembl:ENSMUSP00000034834 psi-mi:rab18_mouse(display_long)|uniprotkb:Rab18(gene name)|psi-mi:Rab18(display_short) psi-mi:kpym_mouse(display_long)|uniprotkb:Pkm(gene name)|psi-mi:Pkm(display_short)|uniprotkb:Pk3(gene name synonym)|uniprotkb:Pkm2(gene name synonym)|uniprotkb:Pykm(gene name synonym)|uniprotkb:Pyruvate kinase muscle isozyme(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567272|imex:IM-24977-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000073639(gene)|ensembl:ENSMUST00000234810(transcript)|go:"GO:0001654"(eye development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007420"(brain development)|go:"GO:0012505"(endomembrane system)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0034389"(lipid droplet organization)|go:"GO:0045202"(synapse)|go:"GO:0051170"(import into nucleus)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR025662|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_851415.1|entrezgene/locuslink:19330(identity) refseq:NP_035229.2|refseq:XP_006510918.1|refseq:NP_001240812.1|refseq:XP_011240975.1|dip:DIP-40536N|ensembl:ENSMUSG00000032294(gene)|ensembl:ENSMUST00000034834(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0001889"(liver development)|go:"GO:0003729"(mRNA binding)|go:"GO:0004743"(pyruvate kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005791"(rough endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005929"(cilium)|go:"GO:0006006"(glucose metabolic process)|go:"GO:0006096"(glycolytic process)|go:"GO:0006754"(ATP biosynthetic process)|go:"GO:0012501"(programmed cell death)|go:"GO:0016301"(kinase activity)|go:"GO:0030955"(potassium ion binding)|go:"GO:0031100"(animal organ regeneration)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0042802"(identical protein binding)|go:"GO:0042866"(pyruvate biosynthetic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0043403"(skeletal muscle tissue regeneration)|go:"GO:0043531"(ADP binding)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070324"(thyroid hormone binding)|go:"GO:1902912"(pyruvate kinase complex)|go:"GO:1903672"(positive regulation of sprouting angiogenesis)|go:"GO:2000767"(positive regulation of cytoplasmic translation)|interpro:IPR001697(Pyruvate kinase)|interpro:IPR011037(Pyruvate kinase, beta-barrel-like)|interpro:IPR015793(Pyruvate kinase, barrel)|interpro:IPR015795(Pyruvate kinase, C-terminal-like)|interpro:IPR015806(Pyruvate kinase, beta-barrel)|interpro:IPR015813(Pyruvate/Phosphoenolpyruvate kinase, catalytic core)|interpro:IPR018209|interpro:IPR036918|interpro:IPR040442|mint:P52480|reactome:R-MMU-6798695|reactome:R-MMU-70171|entrezgene/locuslink:18746(identity) - function:Plays a role in apical endocytosis/recycling. May be implicated in transport between the plasma membrane and early endosomes|comment:mint|comment:homomint author-confidence:1.0076416544244304 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:GBb4x3HIoXCUA2ikZcE28uJtGGM10090 rogid:SWQx3aPATcnlExhyy8afjcrB+xo10090 intact-crc:8715072E2A1B88B3|rigid:VXKAPAuaWSPlqbVsfqGnR7umLvU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P35293 uniprotkb:P97855 intact:EBI-8304813|ensembl:ENSMUSP00000157011|intact:MINT-1864434|uniprotkb:Q543V0 intact:EBI-6666067|ensembl:ENSMUSP00000018727 psi-mi:rab18_mouse(display_long)|uniprotkb:Rab18(gene name)|psi-mi:Rab18(display_short) psi-mi:g3bp1_mouse(display_long)|uniprotkb:G3bp1(gene name)|psi-mi:G3bp1(display_short)|uniprotkb:G3bp(gene name synonym)|uniprotkb:ATP-dependent DNA helicase VIII(gene name synonym)|uniprotkb:GAP SH3 domain-binding protein 1(gene name synonym)|uniprotkb:HDH-VIII(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567272|imex:IM-24977-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000073639(gene)|ensembl:ENSMUST00000234810(transcript)|go:"GO:0001654"(eye development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007420"(brain development)|go:"GO:0012505"(endomembrane system)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0034389"(lipid droplet organization)|go:"GO:0045202"(synapse)|go:"GO:0051170"(import into nucleus)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR025662|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_851415.1|entrezgene/locuslink:19330(identity) ensembl:ENSMUSG00000018583(gene)|ensembl:ENSMUST00000018727(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032481"(positive regulation of type I interferon production)|go:"GO:0033677"(DNA/RNA helicase activity)|go:"GO:0034063"(stress granule assembly)|go:"GO:0043204"(perikaryon)|go:"GO:0045087"(innate immune response)|go:"GO:0051607"(defense response to virus)|go:"GO:0062029"(positive regulation of stress granule assembly)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002075(Nuclear transport factor 2)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR018222|interpro:IPR032710|interpro:IPR034374|interpro:IPR034375|interpro:IPR035979|interpro:IPR039539|mint:P97855|refseq:NP_038744.1|entrezgene/locuslink:27041(identity) - function:Plays a role in apical endocytosis/recycling. May be implicated in transport between the plasma membrane and early endosomes|comment:mint|comment:homomint author-confidence:1.2425497885648291 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:GBb4x3HIoXCUA2ikZcE28uJtGGM10090 rogid:Xxq1G7S8hxbGPvterifIOxpri6U10090 intact-crc:8715072E2A1B88B3|rigid:VXKAPAuaWSPlqbVsfqGnR7umLvU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P51150 uniprotkb:O70571 intact:EBI-8321380|intact:MINT-1864693|ensembl:ENSMUSP00000092658|ensembl:ENSMUSP00000109226|ensembl:ENSMUSP00000109227|ensembl:ENSMUSP00000109228|ensembl:ENSMUSP00000109230 intact:EBI-11567523|ensembl:ENSMUSP00000019721 psi-mi:rab7a_mouse(display_long)|uniprotkb:Rab7a(gene name)|psi-mi:Rab7a(display_short)|uniprotkb:Rab7(gene name synonym) psi-mi:pdk4_mouse(display_long)|uniprotkb:Pyruvate dehydrogenase kinase isoform 4(gene name synonym)|uniprotkb:Pdk4(gene name)|psi-mi:Pdk4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567527|imex:IM-24977-17 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001280581.1|refseq:NP_001280582.1|refseq:NP_001280583.1|refseq:NP_001280584.1|refseq:NP_033031.2|dip:DIP-60513N|reactome:R-MMU-9013149|reactome:R-MMU-9013404|reactome:R-MMU-9013405|reactome:R-MMU-9013406|reactome:R-MMU-9013407|reactome:R-MMU-9013408|reactome:R-MMU-9013423|reactome:R-MMU-9035034|reactome:R-MMU-9013148|ensembl:ENSMUSG00000079477(gene)|ensembl:ENSMUST00000095048(transcript)|ensembl:ENSMUST00000113596(transcript)|ensembl:ENSMUST00000113597(transcript)|ensembl:ENSMUST00000113598(transcript)|ensembl:ENSMUST00000113600(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005829"(cytosol)|go:"GO:0006622"(protein targeting to lysosome)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007174"(epidermal growth factor catabolic process)|go:"GO:0008333"(endosome to lysosome transport)|go:"GO:0010008"(endosome membrane)|go:"GO:0016042"(lipid catabolic process)|go:"GO:0019003"(GDP binding)|go:"GO:0019076"(viral release from host cell)|go:"GO:0022615"(protein to membrane docking)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031902"(late endosome membrane)|go:"GO:0032419"(extrinsic component of lysosome membrane)|go:"GO:0033162"(melanosome membrane)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045453"(bone resorption)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0048524"(positive regulation of viral process)|go:"GO:0051650"(establishment of vesicle localization)|go:"GO:0061724"(lipophagy)|go:"GO:0090383"(phagosome acidification)|go:"GO:0090385"(phagosome-lysosome fusion)|go:"GO:0097208"(alveolar lamellar body)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0099638"(endosome to plasma membrane protein transport)|go:"GO:1903542"(negative regulation of exosomal secretion)|go:"GO:1903543"(positive regulation of exosomal secretion)|go:"GO:1905394"(retromer complex binding)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P51150|rcsb pdb:5Z2M|reactome:R-MMU-2132295|reactome:R-MMU-6798695|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19349(identity) refseq:NP_038771.1|ensembl:ENSMUSG00000019577(gene)|ensembl:ENSMUST00000019721(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004712"(protein serine/threonine/tyrosine kinase activity)|go:"GO:0004740"("pyruvate dehydrogenase (acetyl-transferring) kinase activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006006"(glucose metabolic process)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006885"(regulation of pH)|go:"GO:0008286"(insulin receptor signaling pathway)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0010510"(regulation of acetyl-CoA biosynthetic process from pyruvate)|go:"GO:0010565"(regulation of cellular ketone metabolic process)|go:"GO:0010906"(regulation of glucose metabolic process)|go:"GO:0042304"(regulation of fatty acid biosynthetic process)|go:"GO:0042593"(glucose homeostasis)|go:"GO:0042594"(response to starvation)|go:"GO:0045124"(regulation of bone resorption)|go:"GO:0046320"(regulation of fatty acid oxidation)|go:"GO:0071398"(cellular response to fatty acid)|go:"GO:0072593"(reactive oxygen species metabolic process)|go:"GO:2000811"(negative regulation of anoikis)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR005467(Signal transduction histidine kinase, core)|interpro:IPR018955|interpro:IPR036784|interpro:IPR036890|interpro:IPR039028|reactome:R-MMU-204174|reactome:R-MMU-5362517|entrezgene/locuslink:27273(identity) - comment:mint|function:"Involved in late endocytic transport. Contributes to the maturation of phagosomes (acidification)" author-confidence:10.937151364020142 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:AJbKizzw4zCAn+roRF2Im1Tt4xE10090 rogid:AlfMBhJrU+t4saYKkENDIhjqNtM10090 intact-crc:3F72C8DE7D0E4F46|rigid:rke6djVQ37D9KyIj5+vkfpq0mSY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P51150 uniprotkb:Q64279 intact:EBI-8321380|intact:MINT-1864693|ensembl:ENSMUSP00000092658|ensembl:ENSMUSP00000109226|ensembl:ENSMUSP00000109227|ensembl:ENSMUSP00000109228|ensembl:ENSMUSP00000109230 intact:EBI-81361|ensembl:ENSMUSP00000046999|ensembl:ENSMUSP00000124951|uniprotkb:Q61099 psi-mi:rab7a_mouse(display_long)|uniprotkb:Rab7a(gene name)|psi-mi:Rab7a(display_short)|uniprotkb:Rab7(gene name synonym) psi-mi:hand1_mouse(display_long)|uniprotkb:Hand1(gene name)|psi-mi:Hand1(display_short)|uniprotkb:Ehand(gene name synonym)|uniprotkb:Hxt(gene name synonym)|uniprotkb:Thing1(gene name synonym)|uniprotkb:Extraembryonic tissues, heart, autonomic nervous system and neural crest derivatives-expressed protein 1(gene name synonym)|uniprotkb:Helix-loop-helix transcription factor expressed in extraembryonic mesoderm and trophoblast(gene name synonym)|uniprotkb:Thing-1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567527|imex:IM-24977-17 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001280581.1|refseq:NP_001280582.1|refseq:NP_001280583.1|refseq:NP_001280584.1|refseq:NP_033031.2|dip:DIP-60513N|reactome:R-MMU-9013149|reactome:R-MMU-9013404|reactome:R-MMU-9013405|reactome:R-MMU-9013406|reactome:R-MMU-9013407|reactome:R-MMU-9013408|reactome:R-MMU-9013423|reactome:R-MMU-9035034|reactome:R-MMU-9013148|ensembl:ENSMUSG00000079477(gene)|ensembl:ENSMUST00000095048(transcript)|ensembl:ENSMUST00000113596(transcript)|ensembl:ENSMUST00000113597(transcript)|ensembl:ENSMUST00000113598(transcript)|ensembl:ENSMUST00000113600(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005829"(cytosol)|go:"GO:0006622"(protein targeting to lysosome)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007174"(epidermal growth factor catabolic process)|go:"GO:0008333"(endosome to lysosome transport)|go:"GO:0010008"(endosome membrane)|go:"GO:0016042"(lipid catabolic process)|go:"GO:0019003"(GDP binding)|go:"GO:0019076"(viral release from host cell)|go:"GO:0022615"(protein to membrane docking)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031902"(late endosome membrane)|go:"GO:0032419"(extrinsic component of lysosome membrane)|go:"GO:0033162"(melanosome membrane)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045453"(bone resorption)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0048524"(positive regulation of viral process)|go:"GO:0051650"(establishment of vesicle localization)|go:"GO:0061724"(lipophagy)|go:"GO:0090383"(phagosome acidification)|go:"GO:0090385"(phagosome-lysosome fusion)|go:"GO:0097208"(alveolar lamellar body)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0099638"(endosome to plasma membrane protein transport)|go:"GO:1903542"(negative regulation of exosomal secretion)|go:"GO:1903543"(positive regulation of exosomal secretion)|go:"GO:1905394"(retromer complex binding)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P51150|rcsb pdb:5Z2M|reactome:R-MMU-2132295|reactome:R-MMU-6798695|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19349(identity) ensembl:ENSMUST00000036917(transcript)|ensembl:ENSMUST00000160392(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001221"(transcription coregulator binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001525"(angiogenesis)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0001707"(mesoderm formation)|go:"GO:0001709"(cell fate determination)|go:"GO:0001829"(trophectodermal cell differentiation)|go:"GO:0001947"(heart looping)|go:"GO:0003007"(heart morphogenesis)|go:"GO:0003144"(embryonic heart tube formation)|go:"GO:0003218"(cardiac left ventricle formation)|ensembl:ENSMUSG00000037335(gene)|go:"GO:0003219"(cardiac right ventricle formation)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|refseq:NP_032239.1|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007507"(heart development)|go:"GO:0019899"(enzyme binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032502"(developmental process)|go:"GO:0035050"(embryonic heart tube development)|go:"GO:0042475"(odontogenesis of dentin-containing tooth)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043425"(bHLH transcription factor binding)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0055010"(ventricular cardiac muscle tissue morphogenesis)|go:"GO:0060411"(cardiac septum morphogenesis)|go:"GO:0060485"(mesenchyme development)|go:"GO:0060536"(cartilage morphogenesis)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0061371"(determination of heart left/right asymmetry)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1903026"(negative regulation of RNA polymerase II regulatory region sequence-specific DNA binding)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR036638|dip:DIP-455N|entrezgene/locuslink:15110(identity) - comment:mint|function:"Involved in late endocytic transport. Contributes to the maturation of phagosomes (acidification)" author-confidence:12.822663993902385 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:AJbKizzw4zCAn+roRF2Im1Tt4xE10090 rogid:mIjSCEpJgYJbBejXvZTSCJFoztM10090 intact-crc:3F72C8DE7D0E4F46|rigid:rke6djVQ37D9KyIj5+vkfpq0mSY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P46638 uniprotkb:Q9JHJ3 intact:EBI-1634944|ensembl:ENSMUSP00000110021 intact:EBI-8361332|uniprotkb:Q3UBV7|uniprotkb:Q3TUF5|intact:MINT-4129658|uniprotkb:Q8C6H7|ensembl:ENSMUSP00000135398 psi-mi:rb11b_mouse(display_long)|uniprotkb:Rab11b(gene name)|psi-mi:Rab11b(display_short) psi-mi:glmp_mouse(display_long)|uniprotkb:Glmp(gene name)|psi-mi:Glmp(display_short)|uniprotkb:Lysosomal protein NCU-G1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567453|imex:IM-24977-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033023.1|ensembl:ENSMUSG00000077450(gene)|ensembl:ENSMUST00000057373(transcript)|go:"GO:0001881"(receptor recycling)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0006887"(exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0033572"(transferrin transport)|go:"GO:0035773"(insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0044070"(regulation of anion transport)|go:"GO:0045054"(constitutive secretory pathway)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0071468"(cellular response to acidic pH)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000008"(regulation of protein localization to cell surface)|go:"GO:2001135"(regulation of endocytic recycling)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P46638|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19326(identity) refseq:NP_064387.1|ensembl:ENSMUSG00000001418(gene)|ensembl:ENSMUST00000177005(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005764"(lysosome)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005829"(cytosol)|go:"GO:0016021"(integral component of membrane)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050821"(protein stabilization)|go:"GO:0061462"(protein localization to lysosome)|interpro:IPR029382|mint:Q9JHJ3|rcsb pdb:6NYQ|entrezgene/locuslink:56700(identity) - - comment:mint|function:Does not seem to be involved in inflammatory regulation|author-confidence:1.033524389569079 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:McbcmcV5cB7IE3GFkiDNIB5WcsM10090 rogid:xjwKbxHO8TtC2Yw+D5Pf03YGD5810090 intact-crc:7858199202368955|rigid:MxNvXQMhytCYvc5h7OgAhN5H/40 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P46638 uniprotkb:A2A870 intact:EBI-1634944|ensembl:ENSMUSP00000110021 intact:EBI-11567461|uniprotkb:Q8BSP0|uniprotkb:A2A871|uniprotkb:Q99MZ9|uniprotkb:B2RQ77|ensembl:ENSMUSP00000099320|ensembl:ENSMUSP00000102043 psi-mi:rb11b_mouse(display_long)|uniprotkb:Rab11b(gene name)|psi-mi:Rab11b(display_short) psi-mi:fbf1_mouse(display_long)|uniprotkb:Fbf1(gene name)|psi-mi:Fbf1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567453|imex:IM-24977-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033023.1|ensembl:ENSMUSG00000077450(gene)|ensembl:ENSMUST00000057373(transcript)|go:"GO:0001881"(receptor recycling)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0006887"(exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0033572"(transferrin transport)|go:"GO:0035773"(insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0044070"(regulation of anion transport)|go:"GO:0045054"(constitutive secretory pathway)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0071468"(cellular response to acidic pH)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000008"(regulation of protein localization to cell surface)|go:"GO:2001135"(regulation of endocytic recycling)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P46638|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19326(identity) refseq:NP_766159.3|refseq:XP_006533155.1|refseq:XP_006533156.1|refseq:XP_006533157.1|refseq:XP_011247250.1|ensembl:ENSMUSG00000020776(gene)|ensembl:ENSMUST00000103031(transcript)|ensembl:ENSMUST00000106435(transcript)|go:"GO:0000922"(spindle pole)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043296"(apical junction complex)|go:"GO:0043297"(apical junction assembly)|go:"GO:0045095"(keratin filament)|go:"GO:0060271"(cilium assembly)|go:"GO:0097539"(ciliary transition fiber)|interpro:IPR033561|mint:A2A870|reactome:R-MMU-5620912|go:"GO:0090162"(establishment of epithelial cell polarity)|entrezgene/locuslink:217335(identity) - - author-confidence:1.1922123312490294 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:McbcmcV5cB7IE3GFkiDNIB5WcsM10090 rogid:lBosfua1LlObIvQDPUumR+8UTvQ10090 intact-crc:7858199202368955|rigid:MxNvXQMhytCYvc5h7OgAhN5H/40 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P46638 uniprotkb:Q6A4J8 intact:EBI-1634944|ensembl:ENSMUSP00000110021 intact:EBI-1216254|uniprotkb:Q3UX92|uniprotkb:Q496Y5|uniprotkb:Q8BW01 psi-mi:rb11b_mouse(display_long)|uniprotkb:Rab11b(gene name)|psi-mi:Rab11b(display_short) psi-mi:ubp7_mouse(display_long)|uniprotkb:Usp7(gene name)|psi-mi:Usp7(display_short)|uniprotkb:Hausp(gene name synonym)|uniprotkb:Ubiquitin thioesterase 7(gene name synonym)|uniprotkb:Ubiquitin-specific-processing protease 7(gene name synonym)|uniprotkb:Deubiquitinating enzyme 7(gene name synonym)|uniprotkb:Herpesvirus-associated ubiquitin-specific protease(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567453|imex:IM-24977-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033023.1|ensembl:ENSMUSG00000077450(gene)|ensembl:ENSMUST00000057373(transcript)|go:"GO:0001881"(receptor recycling)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0006887"(exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0033572"(transferrin transport)|go:"GO:0035773"(insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0044070"(regulation of anion transport)|go:"GO:0045054"(constitutive secretory pathway)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0071468"(cellular response to acidic pH)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000008"(regulation of protein localization to cell surface)|go:"GO:2001135"(regulation of endocytic recycling)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P46638|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19326(identity) refseq:NP_001003918.2|mint:Q6A4J8|dip:DIP-38603N|go:"GO:0001741"(XY body)|go:"GO:0002039"(p53 binding)|go:"GO:0004197"(cysteine-type endopeptidase activity)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006111"(regulation of gluconeogenesis)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0010216"(maintenance of DNA methylation)|go:"GO:1905279"(regulation of retrograde transport, endosome to Golgi)|go:"GO:1990380"(Lys48-specific deubiquitinase activity)|interpro:IPR001394(Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2)|interpro:IPR002083(MATH)|interpro:IPR008974(TRAF-like)|interpro:IPR018200|interpro:IPR024729|interpro:IPR028889|interpro:IPR029346|interpro:IPR038765|reactome:R-MMU-5689880|reactome:R-MMU-6781823|reactome:R-MMU-6782135|reactome:R-MMU-6782210|reactome:R-MMU-6804757|reactome:R-MMU-8866652|reactome:R-MMU-8948747|go:"GO:1901537"(positive regulation of DNA demethylation)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0032088"(negative regulation of NF-kappaB transcription factor activity)|go:"GO:0032435"(negative regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0032991"(protein-containing complex)|go:"GO:0035520"(monoubiquitinated protein deubiquitination)|go:"GO:0035616"(histone H2B conserved C-terminal lysine deubiquitination)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042802"(identical protein binding)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0048511"(rhythmic process)|go:"GO:0050821"(protein stabilization)|go:"GO:0051090"(regulation of DNA-binding transcription factor activity)|go:"GO:0070536"(protein K63-linked deubiquitination)|go:"GO:0101005"(deubiquitinase activity)|entrezgene/locuslink:252870(identity) - - author-confidence:1.4769224178401659 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:McbcmcV5cB7IE3GFkiDNIB5WcsM10090 rogid:8+rOJLie2ABsU9vwlnVxcU342aQ10090 intact-crc:7858199202368955|rigid:MxNvXQMhytCYvc5h7OgAhN5H/40 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P46638 uniprotkb:Q62381 intact:EBI-1634944|ensembl:ENSMUSP00000110021 intact:EBI-11567470|uniprotkb:Q3UTT9|uniprotkb:Q8BNP5 psi-mi:rb11b_mouse(display_long)|uniprotkb:Rab11b(gene name)|psi-mi:Rab11b(display_short) psi-mi:tll1_mouse(display_long)|uniprotkb:Tll(gene name synonym)|uniprotkb:Tll1(gene name)|psi-mi:Tll1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567453|imex:IM-24977-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033023.1|ensembl:ENSMUSG00000077450(gene)|ensembl:ENSMUST00000057373(transcript)|go:"GO:0001881"(receptor recycling)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0006887"(exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0033572"(transferrin transport)|go:"GO:0035773"(insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0044070"(regulation of anion transport)|go:"GO:0045054"(constitutive secretory pathway)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0071468"(cellular response to acidic pH)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000008"(regulation of protein localization to cell surface)|go:"GO:2001135"(regulation of endocytic recycling)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P46638|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19326(identity) interpro:IPR000152(Aspartic acid and asparagine hydroxylation site)|interpro:IPR000742(EGF-like, type 3)|interpro:IPR000859(CUB)|interpro:IPR001506(Peptidase M12A, astacin)|interpro:IPR001881(EGF-like calcium-binding)|interpro:IPR006026(Peptidase, metallopeptidases)|interpro:IPR015446(Bone morphogenetic protein 1/tolloid-like protein)|interpro:IPR018097|interpro:IPR024079|reactome:R-MMU-1474228|reactome:R-MMU-1650814|reactome:R-MMU-2214320|go:"GO:0004222"(metalloendopeptidase activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005518"(collagen binding)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0005576"(extracellular region)|interpro:IPR034036|interpro:IPR035914|reactome:R-MMU-2243919|entrezgene/locuslink:21892(identity) - - author-confidence:37.24775489585323 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:McbcmcV5cB7IE3GFkiDNIB5WcsM10090 rogid:y0oF4VY7d6I8QsMtC6VSvITO9Qw10090 intact-crc:7858199202368955|rigid:MxNvXQMhytCYvc5h7OgAhN5H/40 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P46638 uniprotkb:P06151 intact:EBI-1634944|ensembl:ENSMUSP00000110021 intact:EBI-444940|ensembl:ENSMUSP00000036386|ensembl:ENSMUSP00000103267 psi-mi:rb11b_mouse(display_long)|uniprotkb:Rab11b(gene name)|psi-mi:Rab11b(display_short) psi-mi:ldha_mouse(display_long)|uniprotkb:LDH muscle subunit(gene name synonym)|uniprotkb:Ldha(gene name)|psi-mi:Ldha(display_short)|uniprotkb:Ldh-1(gene name synonym)|uniprotkb:Ldh1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567453|imex:IM-24977-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033023.1|ensembl:ENSMUSG00000077450(gene)|ensembl:ENSMUST00000057373(transcript)|go:"GO:0001881"(receptor recycling)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0006887"(exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0033572"(transferrin transport)|go:"GO:0035773"(insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0044070"(regulation of anion transport)|go:"GO:0045054"(constitutive secretory pathway)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0071468"(cellular response to acidic pH)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000008"(regulation of protein localization to cell surface)|go:"GO:2001135"(regulation of endocytic recycling)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P46638|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19326(identity) refseq:NP_034829.1|ensembl:ENSMUSG00000063229(gene)|ensembl:ENSMUST00000005051(transcript)|ensembl:ENSMUST00000048209(transcript)|go:"GO:0004457"(lactate dehydrogenase activity)|go:"GO:0004459"(L-lactate dehydrogenase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0019244"(lactate biosynthetic process from pyruvate)|go:"GO:0019661"(glucose catabolic process to lactate via pyruvate)|go:"GO:0031668"(cellular response to extracellular stimulus)|go:"GO:0035686"(sperm fibrous sheath)|go:"GO:0042802"(identical protein binding)|interpro:IPR001236(Lactate/malate dehydrogenase)|interpro:IPR001557(L-lactate/malate dehydrogenase)|interpro:IPR011304(L-lactate dehydrogenase)|interpro:IPR015955(Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal)|interpro:IPR018177|interpro:IPR022383|interpro:IPR036291|mint:P06151|reactome:R-MMU-70268|entrezgene/locuslink:16828(identity) - - author-confidence:4.20228517776084 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:McbcmcV5cB7IE3GFkiDNIB5WcsM10090 rogid:IErFuOIWq53/XyIxWgUyVi76VnM10090 intact-crc:7858199202368955|rigid:MxNvXQMhytCYvc5h7OgAhN5H/40 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P46638 uniprotkb:Q9D4V7 intact:EBI-1634944|ensembl:ENSMUSP00000110021 intact:EBI-11567455|uniprotkb:Q9D0M6|uniprotkb:Q8BMU2|ensembl:ENSMUSP00000023524 psi-mi:rb11b_mouse(display_long)|uniprotkb:Rab11b(gene name)|psi-mi:Rab11b(display_short) psi-mi:rabl3_mouse(display_long)|uniprotkb:Rabl3(gene name)|psi-mi:Rabl3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567453|imex:IM-24977-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033023.1|ensembl:ENSMUSG00000077450(gene)|ensembl:ENSMUST00000057373(transcript)|go:"GO:0001881"(receptor recycling)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0006887"(exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0033572"(transferrin transport)|go:"GO:0035773"(insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0044070"(regulation of anion transport)|go:"GO:0045054"(constitutive secretory pathway)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0071468"(cellular response to acidic pH)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000008"(regulation of protein localization to cell surface)|go:"GO:2001135"(regulation of endocytic recycling)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P46638|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19326(identity) refseq:NP_001035964.1|ensembl:ENSMUSG00000022827(gene)|ensembl:ENSMUST00000023524(transcript)|go:"GO:0001779"(natural killer cell differentiation)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030183"(B cell differentiation)|go:"GO:0033077"(T cell differentiation in thymus)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0046578"(regulation of Ras protein signal transduction)|go:"GO:0050821"(protein stabilization)|go:"GO:1903059"(regulation of protein lipidation)|interpro:IPR027417|rcsb pdb:6VIH|rcsb pdb:6VII|rcsb pdb:6VIJ|rcsb pdb:6VIK|entrezgene/locuslink:67657(identity) - - author-confidence:68.82165724475607 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:McbcmcV5cB7IE3GFkiDNIB5WcsM10090 rogid:iPmUawwUqiTHBiy+cMSC+4sor3810090 intact-crc:7858199202368955|rigid:MxNvXQMhytCYvc5h7OgAhN5H/40 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P46638 uniprotkb:Q7TNB8 intact:EBI-1634944|ensembl:ENSMUSP00000110021 intact:EBI-11567093|uniprotkb:Q70X02|uniprotkb:Q6P3A3|uniprotkb:Q3UE14|ensembl:ENSMUSP00000041635|ensembl:ENSMUSP00000151590 psi-mi:rb11b_mouse(display_long)|uniprotkb:Rab11b(gene name)|psi-mi:Rab11b(display_short) psi-mi:sbno2_mouse(display_long)|uniprotkb:Sno(gene name synonym)|uniprotkb:Stno(gene name synonym)|uniprotkb:Sbno2(gene name)|psi-mi:Sbno2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567453|imex:IM-24977-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033023.1|ensembl:ENSMUSG00000077450(gene)|ensembl:ENSMUST00000057373(transcript)|go:"GO:0001881"(receptor recycling)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0006887"(exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0033572"(transferrin transport)|go:"GO:0035773"(insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0044070"(regulation of anion transport)|go:"GO:0045054"(constitutive secretory pathway)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0071468"(cellular response to acidic pH)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000008"(regulation of protein localization to cell surface)|go:"GO:2001135"(regulation of endocytic recycling)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P46638|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19326(identity) refseq:NP_906271.1|refseq:XP_006513555.1|refseq:XP_006513556.1|refseq:XP_006513557.1|refseq:XP_006513558.1|refseq:XP_006513559.1|ensembl:ENSMUSG00000035673(gene)|ensembl:ENSMUST00000042771(transcript)|ensembl:ENSMUST00000219260(transcript)|go:"GO:0002281"(macrophage activation involved in immune response)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0030282"(bone mineralization)|go:"GO:0030316"(osteoclast differentiation)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0042393"(histone binding)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050727"(regulation of inflammatory response)|go:"GO:0061430"(bone trabecula morphogenesis)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071348"(cellular response to interleukin-11)|go:"GO:0071354"(cellular response to interleukin-6)|go:"GO:0072674"(multinuclear osteoclast differentiation)|go:"GO:0072675"(osteoclast fusion)|go:"GO:1990830"(cellular response to leukemia inhibitory factor)|interpro:IPR026741|interpro:IPR026937|interpro:IPR027417|interpro:IPR030410|interpro:IPR039187|entrezgene/locuslink:216161(identity) - - author-confidence:7.63683488064489 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:McbcmcV5cB7IE3GFkiDNIB5WcsM10090 rogid:oMJtH/jct9exK528OJl0B+H3yyE10090 intact-crc:7858199202368955|rigid:MxNvXQMhytCYvc5h7OgAhN5H/40 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P46638 uniprotkb:P52633 intact:EBI-1634944|ensembl:ENSMUSP00000110021 intact:EBI-647085|uniprotkb:Q8R2F1|ensembl:ENSMUSP00000089708 psi-mi:rb11b_mouse(display_long)|uniprotkb:Rab11b(gene name)|psi-mi:Rab11b(display_short) psi-mi:stat6_mouse(display_long)|uniprotkb:Stat6(gene name)|psi-mi:Stat6(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567453|imex:IM-24977-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033023.1|ensembl:ENSMUSG00000077450(gene)|ensembl:ENSMUST00000057373(transcript)|go:"GO:0001881"(receptor recycling)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0006887"(exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0033572"(transferrin transport)|go:"GO:0035773"(insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0044070"(regulation of anion transport)|go:"GO:0045054"(constitutive secretory pathway)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0071468"(cellular response to acidic pH)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000008"(regulation of protein localization to cell surface)|go:"GO:2001135"(regulation of endocytic recycling)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P46638|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19326(identity) refseq:NP_033310.2|dip:DIP-49680N|ensembl:ENSMUSG00000002147(gene)|ensembl:ENSMUST00000092074(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0002296"(T-helper 1 cell lineage commitment)|go:"GO:0002829"(negative regulation of type 2 immune response)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006952"(defense response)|go:"GO:0007165"(signal transduction)|go:"GO:0007259"(receptor signaling pathway via JAK-STAT)|go:"GO:0019221"(cytokine-mediated signaling pathway)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0033598"(mammary gland epithelial cell proliferation)|go:"GO:0034097"(response to cytokine)|go:"GO:0035771"(interleukin-4-mediated signaling pathway)|go:"GO:0042127"(regulation of cell population proliferation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045121"(membrane raft)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048295"(positive regulation of isotype switching to IgE isotypes)|go:"GO:0060397"(growth hormone receptor signaling pathway via JAK-STAT)|go:"GO:0060443"(mammary gland morphogenesis)|go:"GO:0070301"(cellular response to hydrogen peroxide)|go:"GO:0120162"(positive regulation of cold-induced thermogenesis)|go:"GO:1902170"(cellular response to reactive nitrogen species)|interpro:IPR000980(SH2 motif)|interpro:IPR001217(STAT transcription factor, core)|interpro:IPR008967(p53-like transcription factor, DNA-binding)|interpro:IPR012345(STAT transcription factor, DNA-binding, subdomain)|interpro:IPR013799(STAT transcription factor, protein interaction)|interpro:IPR013800(STAT transcription factor, all-alpha)|interpro:IPR013801(STAT transcription factor, DNA-binding)|interpro:IPR015988(STAT transcription factor, coiled coil)|interpro:IPR028187|interpro:IPR035857|interpro:IPR036535|interpro:IPR036860|reactome:R-MMU-186763|reactome:R-MMU-3249367|reactome:R-MMU-6785807|entrezgene/locuslink:20852(identity) - - author-confidence:1.087788882561998 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:McbcmcV5cB7IE3GFkiDNIB5WcsM10090 rogid:m07k8wM7HDHszNbxbEL8Yu2oDYE10090 intact-crc:7858199202368955|rigid:MxNvXQMhytCYvc5h7OgAhN5H/40 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P53994 uniprotkb:P35292 intact:EBI-444664|uniprotkb:Q3UK45|ensembl:ENSMUSP00000057664 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 psi-mi:rab2a_mouse(display_long)|uniprotkb:Rab2(gene name synonym)|uniprotkb:Rab2a(gene name)|psi-mi:Rab2a(display_short) psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567552|imex:IM-24977-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_067493.1|ensembl:ENSMUSG00000047187(gene)|ensembl:ENSMUST00000060232(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007030"(Golgi organization)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019003"(GDP binding)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043025"(neuronal cell body)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P53994|reactome:R-MMU-162658|reactome:R-MMU-8873719|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|entrezgene/locuslink:59021(identity) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) - - comment:mint|function:Might be involved in transcellular transport|author-confidence:31.18084177794755 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:gBkMWVEMfkyF8vxEHTY8IM6VYAI10090 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 intact-crc:D500A8AB646DED4B|rigid:+bNaEE/xTROWJ2uWigx+nmT5cDU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P53994 uniprotkb:Q6ZQ08 intact:EBI-444664|uniprotkb:Q3UK45|ensembl:ENSMUSP00000057664 intact:EBI-682479|intact:EBI-2104684|uniprotkb:B2RY28|uniprotkb:Q3UPB7|uniprotkb:Q8BSB4|uniprotkb:Q8BXB2|uniprotkb:Q8C0H2|uniprotkb:Q8K3D8 psi-mi:rab2a_mouse(display_long)|uniprotkb:Rab2(gene name synonym)|uniprotkb:Rab2a(gene name)|psi-mi:Rab2a(display_short) psi-mi:cnot1_mouse(display_long)|uniprotkb:Cnot1(gene name)|psi-mi:Cnot1(display_short)|uniprotkb:Kiaa1007(gene name synonym)|uniprotkb:CCR4-associated factor 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567552|imex:IM-24977-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_067493.1|ensembl:ENSMUSG00000047187(gene)|ensembl:ENSMUST00000060232(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007030"(Golgi organization)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019003"(GDP binding)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043025"(neuronal cell body)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P53994|reactome:R-MMU-162658|reactome:R-MMU-8873719|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|entrezgene/locuslink:59021(identity) refseq:NP_835179.1|refseq:XP_006530937.1|dip:DIP-46845N|mint:Q6ZQ08|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000288"(nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:0000932"(P-body)|go:"GO:0001829"(trophectodermal cell differentiation)|go:"GO:0004535"("poly(A)-specific ribonuclease activity")|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0010606"(positive regulation of cytoplasmic mRNA processing body assembly)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0030331"(estrogen receptor binding)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0035195"(gene silencing by miRNA)|go:"GO:0042974"(retinoic acid receptor binding)|go:"GO:0048387"(negative regulation of retinoic acid receptor signaling pathway)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0060213"("positive regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0061014"(positive regulation of mRNA catabolic process)|go:"GO:0070016"(armadillo repeat domain binding)|go:"GO:1900153"(positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:2000036"(regulation of stem cell population maintenance)|interpro:IPR007196(CCR4-Not complex component, Not1)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR024557|interpro:IPR032191|interpro:IPR032193|interpro:IPR032194|interpro:IPR038535|interpro:IPR040398|reactome:R-MMU-429947|reactome:R-MMU-6804115|entrezgene/locuslink:234594(identity) - - comment:AfCS Y2H protein 39306. Translated from nucleotide sequence.|author-confidence:1.062441652282411 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:gBkMWVEMfkyF8vxEHTY8IM6VYAI10090 rogid:2Q4quoSuPlUbD4QkiAkc9Hr9avI10090 intact-crc:D500A8AB646DED4B|rigid:+bNaEE/xTROWJ2uWigx+nmT5cDU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P53994 uniprotkb:Q7TMK6 intact:EBI-444664|uniprotkb:Q3UK45|ensembl:ENSMUSP00000057664 intact:EBI-643708|uniprotkb:Q8BY47|uniprotkb:Q8R347|uniprotkb:Q8VCN4|uniprotkb:Q99LU2|uniprotkb:Q66JV2|ensembl:ENSMUSP00000067752 psi-mi:rab2a_mouse(display_long)|uniprotkb:Rab2(gene name synonym)|uniprotkb:Rab2a(gene name)|psi-mi:Rab2a(display_short) psi-mi:hook2_mouse(display_long)|uniprotkb:Hook2(gene name)|psi-mi:Hook2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567552|imex:IM-24977-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_067493.1|ensembl:ENSMUSG00000047187(gene)|ensembl:ENSMUST00000060232(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007030"(Golgi organization)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019003"(GDP binding)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043025"(neuronal cell body)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P53994|reactome:R-MMU-162658|reactome:R-MMU-8873719|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|entrezgene/locuslink:59021(identity) refseq:NP_001161463.1|refseq:NP_573518.2|ensembl:ENSMUSG00000052566(gene)|ensembl:ENSMUST00000064495(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005874"(microtubule)|go:"GO:0007032"(endosome organization)|go:"GO:0007040"(lysosome organization)|go:"GO:0008017"(microtubule binding)|go:"GO:0008333"(endosome to lysosome transport)|go:"GO:0015031"(protein transport)|go:"GO:0030705"(cytoskeleton-dependent intracellular transport)|go:"GO:0030897"(HOPS complex)|go:"GO:0031122"(cytoplasmic microtubule organization)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0051959"(dynein light intermediate chain binding)|go:"GO:0070695"(FHF complex)|go:"GO:1905719"(protein localization to perinuclear region of cytoplasm)|interpro:IPR001715(Calponin-like actin-binding)|interpro:IPR008636(HOOK)|interpro:IPR036872|interpro:IPR043936|go:"GO:0045022"(early endosome to late endosome transport)|entrezgene/locuslink:170833(identity) - - author-confidence:1.4687113432425534 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:gBkMWVEMfkyF8vxEHTY8IM6VYAI10090 rogid:ukTs0PuUe15+QA0bb7roixj3OS010090 intact-crc:D500A8AB646DED4B|rigid:+bNaEE/xTROWJ2uWigx+nmT5cDU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P53994 uniprotkb:P59279 intact:EBI-444664|uniprotkb:Q3UK45|ensembl:ENSMUSP00000057664 intact:EBI-11567554|uniprotkb:Q3TV67|ensembl:ENSMUSP00000022765|ensembl:ENSMUSP00000131145 psi-mi:rab2a_mouse(display_long)|uniprotkb:Rab2(gene name synonym)|uniprotkb:Rab2a(gene name)|psi-mi:Rab2a(display_short) psi-mi:rab2b_mouse(display_long)|uniprotkb:Rab2b(gene name)|psi-mi:Rab2b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567552|imex:IM-24977-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_067493.1|ensembl:ENSMUSG00000047187(gene)|ensembl:ENSMUST00000060232(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007030"(Golgi organization)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019003"(GDP binding)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043025"(neuronal cell body)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P53994|reactome:R-MMU-162658|reactome:R-MMU-8873719|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|entrezgene/locuslink:59021(identity) refseq:NP_766189.1|ensembl:ENSMUSG00000022159(gene)|ensembl:ENSMUST00000022765(transcript)|ensembl:ENSMUST00000167116(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|entrezgene/locuslink:76338(identity) - - author-confidence:178.73028226461435 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:gBkMWVEMfkyF8vxEHTY8IM6VYAI10090 rogid:pTSmtuIPKapOSYFu6AT8mwYLlMk10090 intact-crc:D500A8AB646DED4B|rigid:+bNaEE/xTROWJ2uWigx+nmT5cDU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P53994 uniprotkb:P33610 intact:EBI-444664|uniprotkb:Q3UK45|ensembl:ENSMUSP00000057664 intact:EBI-848748|uniprotkb:Q3U4Z3|ensembl:ENSMUSP00000027312 psi-mi:rab2a_mouse(display_long)|uniprotkb:Rab2(gene name synonym)|uniprotkb:Rab2a(gene name)|psi-mi:Rab2a(display_short) psi-mi:pri2_mouse(display_long)|uniprotkb:DNA primase 58 kDa subunit(gene name synonym)|uniprotkb:Prim2(gene name)|psi-mi:Prim2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567552|imex:IM-24977-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_067493.1|ensembl:ENSMUSG00000047187(gene)|ensembl:ENSMUST00000060232(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007030"(Golgi organization)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019003"(GDP binding)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043025"(neuronal cell body)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P53994|reactome:R-MMU-162658|reactome:R-MMU-8873719|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|entrezgene/locuslink:59021(identity) refseq:NP_032948.1|ensembl:ENSMUSG00000026134(gene)|ensembl:ENSMUST00000027312(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005658"("alpha DNA polymerase:primase complex")|go:"GO:0006269"(DNA replication, synthesis of RNA primer)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|go:"GO:0071667"(DNA/RNA hybrid binding)|interpro:IPR007238(DNA primase, large subunit, eukaryotic/archaeal)|interpro:IPR016558(DNA primase, large subunit, eukaryotic)|reactome:R-MMU-113501|reactome:R-MMU-174411|reactome:R-MMU-174430|reactome:R-MMU-68952|reactome:R-MMU-68962|reactome:R-MMU-69091|reactome:R-MMU-69166|reactome:R-MMU-69183|go:"GO:0046872"(metal ion binding)|entrezgene/locuslink:19076(identity) - - author-confidence:17.683084650824053 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:gBkMWVEMfkyF8vxEHTY8IM6VYAI10090 rogid:OwusfGlmgCZF5zSS5MON0GSGwz810090 intact-crc:D500A8AB646DED4B|rigid:+bNaEE/xTROWJ2uWigx+nmT5cDU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P53994 uniprotkb:P62849 intact:EBI-444664|uniprotkb:Q3UK45|ensembl:ENSMUSP00000057664 intact:EBI-11567545|uniprotkb:P16632|uniprotkb:Q6PDB5|uniprotkb:Q642L0|ensembl:ENSMUSP00000152944 psi-mi:rab2a_mouse(display_long)|uniprotkb:Rab2(gene name synonym)|uniprotkb:Rab2a(gene name)|psi-mi:Rab2a(display_short) psi-mi:rs24_mouse(display_long)|uniprotkb:Rps24(gene name)|psi-mi:Rps24(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567552|imex:IM-24977-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_067493.1|ensembl:ENSMUSG00000047187(gene)|ensembl:ENSMUST00000060232(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007030"(Golgi organization)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019003"(GDP binding)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043025"(neuronal cell body)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P53994|reactome:R-MMU-162658|reactome:R-MMU-8873719|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|entrezgene/locuslink:59021(identity) refseq:NP_035427.2|refseq:NP_997517.1|refseq:NP_997518.1|refseq:XP_006518797.1|interpro:IPR001976(Ribosomal protein S24e)|interpro:IPR012678(Ribosomal protein L23/L15e, core)|interpro:IPR018098|mint:P62849|reactome:R-MMU-156827|reactome:R-MMU-1799339|reactome:R-MMU-6791226|reactome:R-MMU-72649|reactome:R-MMU-72689|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-975956|reactome:R-MMU-975957|ensembl:ENSMUSG00000025290(gene)|ensembl:ENSMUST00000225023(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0006412"(translation)|go:"GO:0015935"(small ribosomal subunit)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0034101"(erythrocyte homeostasis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|entrezgene/locuslink:20088(identity) - - author-confidence:7.94974822346261 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:gBkMWVEMfkyF8vxEHTY8IM6VYAI10090 rogid:M/qkRxabHx9PFaOM7EwKDOOwu7Q10090 intact-crc:D500A8AB646DED4B|rigid:+bNaEE/xTROWJ2uWigx+nmT5cDU false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P55258 uniprotkb:P62823 intact:EBI-398411|uniprotkb:Q8VCF6|ensembl:ENSMUSP00000003121 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 psi-mi:rab8a_mouse(display_long)|uniprotkb:Rab8a(gene name)|psi-mi:Rab8a(display_short)|uniprotkb:Mel(gene name synonym)|uniprotkb:Rab8(gene name synonym)|uniprotkb:Oncogene c-mel(gene name synonym) psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567595|imex:IM-24977-19 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_075615.2|dip:DIP-31053N|ensembl:ENSMUSG00000003037(gene)|ensembl:ENSMUST00000003121(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0014069"(postsynaptic density)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0045202"(synapse)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097546"(ciliary base)|go:"GO:0097730"(non-motile cilium)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098969"(neurotransmitter receptor transport to postsynaptic membrane)|go:"GO:0099003"(vesicle-mediated transport in synapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P55258|rcsb pdb:2FU5|reactome:R-MMU-2565942|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0098978"(glutamatergic synapse)|entrezgene/locuslink:17274(identity) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) - - author-confidence:1.0113901884798622 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:SE+1h+U6C8cAN2UTBIDapsUt4zA10090 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 intact-crc:34053791D5462005|rigid:38av7mwXYfRTj37oA7muHBx+Qqo false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P55258 uniprotkb:Q8BHC1 intact:EBI-398411|uniprotkb:Q8VCF6|ensembl:ENSMUSP00000003121 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab8a_mouse(display_long)|uniprotkb:Rab8a(gene name)|psi-mi:Rab8a(display_short)|uniprotkb:Mel(gene name synonym)|uniprotkb:Rab8(gene name synonym)|uniprotkb:Oncogene c-mel(gene name synonym) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567595|imex:IM-24977-19 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_075615.2|dip:DIP-31053N|ensembl:ENSMUSG00000003037(gene)|ensembl:ENSMUST00000003121(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0014069"(postsynaptic density)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0045202"(synapse)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097546"(ciliary base)|go:"GO:0097730"(non-motile cilium)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098969"(neurotransmitter receptor transport to postsynaptic membrane)|go:"GO:0099003"(vesicle-mediated transport in synapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P55258|rcsb pdb:2FU5|reactome:R-MMU-2565942|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0098978"(glutamatergic synapse)|entrezgene/locuslink:17274(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - - author-confidence:1.104568035000598 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:SE+1h+U6C8cAN2UTBIDapsUt4zA10090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:34053791D5462005|rigid:38av7mwXYfRTj37oA7muHBx+Qqo false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P55258 uniprotkb:P58389 intact:EBI-398411|uniprotkb:Q8VCF6|ensembl:ENSMUSP00000003121 intact:EBI-11567597|ensembl:ENSMUSP00000046837 psi-mi:rab8a_mouse(display_long)|uniprotkb:Rab8a(gene name)|psi-mi:Rab8a(display_short)|uniprotkb:Mel(gene name synonym)|uniprotkb:Rab8(gene name synonym)|uniprotkb:Oncogene c-mel(gene name synonym) psi-mi:ptpa_mouse(display_long)|uniprotkb:Ptpa(gene name)|psi-mi:Ptpa(display_short)|uniprotkb:PP2A, subunit B', PR53 isoform(gene name synonym)|uniprotkb:Phosphotyrosyl phosphatase activator(gene name synonym)|uniprotkb:Ppp2r4(gene name synonym)|uniprotkb:Serine/threonine-protein phosphatase 2A regulatory subunit 4(gene name synonym)|uniprotkb:Serine/threonine-protein phosphatase 2A regulatory subunit B'(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567595|imex:IM-24977-19 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_075615.2|dip:DIP-31053N|ensembl:ENSMUSG00000003037(gene)|ensembl:ENSMUST00000003121(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0014069"(postsynaptic density)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0045202"(synapse)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097546"(ciliary base)|go:"GO:0097730"(non-motile cilium)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098969"(neurotransmitter receptor transport to postsynaptic membrane)|go:"GO:0099003"(vesicle-mediated transport in synapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P55258|rcsb pdb:2FU5|reactome:R-MMU-2565942|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0098978"(glutamatergic synapse)|entrezgene/locuslink:17274(identity) refseq:NP_620087.3|ensembl:ENSMUSG00000039515(gene)|ensembl:ENSMUST00000042055(transcript)|go:"GO:0000159"(protein phosphatase type 2A complex)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0007052"(mitotic spindle organization)|go:"GO:0008160"(protein tyrosine phosphatase activator activity)|go:"GO:0019888"(protein phosphatase regulator activity)|go:"GO:0032515"(negative regulation of phosphoprotein phosphatase activity)|go:"GO:0032516"(positive regulation of phosphoprotein phosphatase activity)|go:"GO:0034704"(calcium channel complex)|go:"GO:0035307"(positive regulation of protein dephosphorylation)|go:"GO:0035308"(negative regulation of protein dephosphorylation)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043666"(regulation of phosphoprotein phosphatase activity)|go:"GO:0051721"(protein phosphatase 2A binding)|interpro:IPR004327(Phosphotyrosyl phosphatase activator, PTPA)|interpro:IPR037218|interpro:IPR043170|entrezgene/locuslink:110854(identity) - - author-confidence:1.1420533755549167 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:SE+1h+U6C8cAN2UTBIDapsUt4zA10090 rogid:d7IaNLYe476wB4fY8kgb/gF6AsU10090 intact-crc:34053791D5462005|rigid:38av7mwXYfRTj37oA7muHBx+Qqo false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P55258 uniprotkb:P61028 intact:EBI-398411|uniprotkb:Q8VCF6|ensembl:ENSMUSP00000003121 intact:EBI-911674|ensembl:ENSMUSP00000041857|uniprotkb:Q3U1Z3 psi-mi:rab8a_mouse(display_long)|uniprotkb:Rab8a(gene name)|psi-mi:Rab8a(display_short)|uniprotkb:Mel(gene name synonym)|uniprotkb:Rab8(gene name synonym)|uniprotkb:Oncogene c-mel(gene name synonym) psi-mi:rab8b_mouse(display_long)|uniprotkb:Rab8b(gene name)|psi-mi:Rab8b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567595|imex:IM-24977-19 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_075615.2|dip:DIP-31053N|ensembl:ENSMUSG00000003037(gene)|ensembl:ENSMUST00000003121(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0014069"(postsynaptic density)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0045202"(synapse)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097546"(ciliary base)|go:"GO:0097730"(non-motile cilium)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098969"(neurotransmitter receptor transport to postsynaptic membrane)|go:"GO:0099003"(vesicle-mediated transport in synapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P55258|rcsb pdb:2FU5|reactome:R-MMU-2565942|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0098978"(glutamatergic synapse)|entrezgene/locuslink:17274(identity) refseq:NP_775589.1|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098793"(presynapse)|go:"GO:0150115"(cell-substrate junction organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|ensembl:ENSMUSG00000036943(gene)|ensembl:ENSMUST00000041139(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016604"(nuclear body)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031346"(positive regulation of cell projection organization)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045046"(protein import into peroxisome membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051286"(cell tip)|go:"GO:0051461"(positive regulation of corticotropin secretion)|entrezgene/locuslink:235442(identity) - - author-confidence:3.0696923881553464 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:SE+1h+U6C8cAN2UTBIDapsUt4zA10090 rogid:bRfYongYDkw/3XyTJ8jMVUZ001E10090 intact-crc:34053791D5462005|rigid:38av7mwXYfRTj37oA7muHBx+Qqo false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P55258 uniprotkb:Q6PHN9 intact:EBI-398411|uniprotkb:Q8VCF6|ensembl:ENSMUSP00000003121 intact:EBI-1373353|ensembl:ENSMUSP00000031492 psi-mi:rab8a_mouse(display_long)|uniprotkb:Rab8a(gene name)|psi-mi:Rab8a(display_short)|uniprotkb:Mel(gene name synonym)|uniprotkb:Rab8(gene name synonym)|uniprotkb:Oncogene c-mel(gene name synonym) psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567595|imex:IM-24977-19 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_075615.2|dip:DIP-31053N|ensembl:ENSMUSG00000003037(gene)|ensembl:ENSMUST00000003121(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0014069"(postsynaptic density)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0045202"(synapse)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097546"(ciliary base)|go:"GO:0097730"(non-motile cilium)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098969"(neurotransmitter receptor transport to postsynaptic membrane)|go:"GO:0099003"(vesicle-mediated transport in synapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P55258|rcsb pdb:2FU5|reactome:R-MMU-2565942|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0098978"(glutamatergic synapse)|entrezgene/locuslink:17274(identity) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) - - author-confidence:6.075302694124976 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:SE+1h+U6C8cAN2UTBIDapsUt4zA10090 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 intact-crc:34053791D5462005|rigid:38av7mwXYfRTj37oA7muHBx+Qqo false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:Q922B2 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-8315918|ensembl:ENSMUSP00000027602|uniprotkb:Q3U987|intact:MINT-1856918 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:sydc_mouse(display_long)|uniprotkb:Dars1(gene name)|psi-mi:Dars1(display_short)|uniprotkb:Aspartyl-tRNA synthetase(gene name synonym)|uniprotkb:Dars(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) ensembl:ENSMUSG00000026356(gene)|ensembl:ENSMUST00000027602(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004815"(aspartate-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006422"(aspartyl-tRNA aminoacylation)|go:"GO:0017101"(aminoacyl-tRNA synthetase multienzyme complex)|go:"GO:0045202"(synapse)|interpro:IPR002312(Aspartyl-tRNA synthetase, class IIb)|interpro:IPR004364("Aminoacyl-tRNA synthetase, class II (D, K and N)")|interpro:IPR004365(Nucleic acid binding, OB-fold, tRNA/helicase-type)|interpro:IPR004523(Aspartyl-tRNA synthetase, class IIb, archea/euk type)|interpro:IPR006195(Aminoacyl-tRNA synthetase, class II)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|mint:Q922B2|refseq:NP_803228.2|entrezgene/locuslink:226414(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic comment:mint|author-confidence:9.21996576338896 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:H7kUtRmDz/6VlO4kR9jYORfDUqI10090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:Q8C0E2 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-8314940|ensembl:ENSMUSP00000034470|uniprotkb:Q8K2V3|uniprotkb:Q3TN45|intact:MINT-3253852 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:vp26b_mouse(display_long)|uniprotkb:Vps26b(gene name)|psi-mi:Vps26b(display_short)|uniprotkb:Vesicle protein sorting 26B(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) ensembl:ENSMUSG00000031988(gene)|ensembl:ENSMUST00000034470(transcript)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0030904"(retromer complex)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0071346"(cellular response to interferon-gamma)|interpro:IPR014752(Arrestin, C-terminal)|interpro:IPR028934|mint:Q8C0E2|rcsb pdb:2R51|rcsb pdb:3LH8|rcsb pdb:3LH9|rcsb pdb:3LHA|refseq:NP_821170.1|entrezgene/locuslink:69091(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic comment:mint|function:"Probable component of the retromer complex, a complex required to retrieve lysosomal enzyme receptors (IGF2R and M6PR) from endosomes to the trans-Golgi network"|author-confidence:3.5766369937470883 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:0ldtjq7g6fEiaFTAusA8J+Xy4Qg10090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:P24527 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-8320354|uniprotkb:Q8VDR8|uniprotkb:Q3UY71|intact:MINT-1868661|ensembl:ENSMUSP00000016033 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:lkha4_mouse(display_long)|uniprotkb:Lta4h(gene name)|psi-mi:Lta4h(display_short)|uniprotkb:"Leukotriene A(4) hydrolase"(gene name synonym)|uniprotkb:Tripeptide aminopeptidase LTA4H(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) refseq:NP_001300826.1|refseq:NP_032543.2|ensembl:ENSMUSG00000015889(gene)|ensembl:ENSMUST00000016033(transcript)|go:"GO:0004177"(aminopeptidase activity)|go:"GO:0004301"(epoxide hydrolase activity)|go:"GO:0004463"(leukotriene-A4 hydrolase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006691"(leukotriene metabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0019370"(leukotriene biosynthetic process)|go:"GO:0043171"(peptide catabolic process)|go:"GO:0044267"(cellular protein metabolic process)|go:"GO:0045148"(tripeptide aminopeptidase activity)|go:"GO:0070006"(metalloaminopeptidase activity)|interpro:IPR001930(Peptidase M1, membrane alanine aminopeptidase)|interpro:IPR012777(Leukotriene A-4 hydrolase/aminopeptidase)|interpro:IPR014782(Peptidase M1, membrane alanine aminopeptidase, N-terminal)|interpro:IPR015211(Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR027268|interpro:IPR034015|interpro:IPR038502|interpro:IPR042097|mint:P24527|reactome:R-MMU-2142691|reactome:R-MMU-6798695|reactome:R-MMU-9018676|reactome:R-MMU-9018681|reactome:R-MMU-9018896|reactome:R-MMU-9020265|reactome:R-MMU-9023661|entrezgene/locuslink:16993(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic function:"Hydrolyzes an epoxide moiety of leukotriene A4 (LTA-4) to form leukotriene B4 (LTB-4). The enzyme also has some peptidase activity"|comment:mint|author-confidence:11.005874488369727 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:PJ9+OUT5DBzQZC5buECwETurf+010090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:Q91YM4 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-8353709|intact:MINT-4121960|uniprotkb:Q6ZQ19|uniprotkb:Q8C6D1|uniprotkb:Q3TKZ4|uniprotkb:O89082|ensembl:ENSMUSP00000000394|ensembl:ENSMUSP00000114256|ensembl:ENSMUSP00000140835 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:fakd4_mouse(display_long)|uniprotkb:Tbrg4(gene name)|psi-mi:Tbrg4(display_short)|uniprotkb:Kiaa0948(gene name synonym)|uniprotkb:Transforming growth factor beta regulator 4(gene name synonym)|uniprotkb:Protein TBRG4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) refseq:NP_001123929.1|refseq:NP_598772.1|refseq:XP_006514670.1|refseq:XP_006514671.1|ensembl:ENSMUSG00000000384(gene)|ensembl:ENSMUST00000000394(transcript)|ensembl:ENSMUST00000156969(transcript)|ensembl:ENSMUST00000189268(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0016071"(mRNA metabolic process)|go:"GO:0044528"(regulation of mitochondrial mRNA stability)|go:"GO:0090615"(mitochondrial mRNA processing)|interpro:IPR010622(FAST kinase leucine-rich)|interpro:IPR013579(FAST kinase-like protein, subdomain 2)|interpro:IPR013584(RAP domain)|interpro:IPR016024(Armadillo-type fold)|mint:Q91YM4|entrezgene/locuslink:21379(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic comment:mint|function:May play a role in cell cycle progression|author-confidence:2.348545836538925 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:in3JOCGu68ilWk/IHs5nqyhJwr010090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:Q61024 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-8312094|ensembl:ENSMUSP00000031766|ensembl:ENSMUSP00000111204|uniprotkb:Q8BPC8|uniprotkb:Q3TJA1|intact:MINT-4088470 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:asns_mouse(display_long)|uniprotkb:Asns(gene name)|psi-mi:Asns(display_short)|uniprotkb:Glutamine-dependent asparagine synthetase(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) go:"GO:0045931"(positive regulation of mitotic cell cycle)|go:"GO:0070981"(L-asparagine biosynthetic process)|interpro:IPR001962(Asparagine synthase)|interpro:IPR006426(Asparagine synthase, glutamine-hydrolyzing)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR017932|interpro:IPR029055|interpro:IPR033738|mint:Q61024|reactome:R-MMU-8963693|go:"GO:0043200"(response to amino acid)|ensembl:ENSMUSG00000029752(gene)|ensembl:ENSMUST00000031766(transcript)|ensembl:ENSMUST00000115542(transcript)|go:"GO:0001889"(liver development)|go:"GO:0004066"("asparagine synthase (glutamine-hydrolyzing) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0006529"(asparagine biosynthetic process)|go:"GO:0006541"(glutamine metabolic process)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009612"(response to mechanical stimulus)|go:"GO:0009636"(response to toxic substance)|go:"GO:0031427"(response to methotrexate)|go:"GO:0032354"(response to follicle-stimulating hormone)|go:"GO:0032870"(cellular response to hormone stimulus)|go:"GO:0042149"(cellular response to glucose starvation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|refseq:NP_036185.1|refseq:XP_006505155.1|refseq:XP_006505156.1|entrezgene/locuslink:27053(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic comment:mint|author-confidence:18.60611653656873 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:q6Z12JltPwDjiOVpLU2R88o5nAw10090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:O88342 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-6914976|ensembl:ENSMUSP00000005234 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:wdr1_mouse(display_long)|uniprotkb:Wdr1(gene name)|psi-mi:Wdr1(display_short)|uniprotkb:Actin-interacting protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) go:"GO:0045199"(maintenance of epithelial cell apical/basal polarity)|go:"GO:0045214"(sarcomere organization)|go:"GO:0048713"(regulation of oligodendrocyte differentiation)|go:"GO:0051015"(actin filament binding)|go:"GO:0060307"(regulation of ventricular cardiac muscle cell membrane repolarization)|go:"GO:1990266"(neutrophil migration)|interpro:IPR001680(WD40 repeat)|interpro:IPR011045(Nitrous oxide reductase, N-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|reactome:R-MMU-114608|ensembl:ENSMUSG00000005103(gene)|ensembl:ENSMUST00000005234(transcript)|go:"GO:0002102"(podosome)|go:"GO:0002446"(neutrophil mediated immunity)|go:"GO:0003779"(actin binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030042"(actin filament depolymerization)|go:"GO:0030043"(actin filament fragmentation)|go:"GO:0030054"(cell junction)|go:"GO:0030220"(platelet formation)|go:"GO:0030834"(regulation of actin filament depolymerization)|go:"GO:0030836"(positive regulation of actin filament depolymerization)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0030865"(cortical cytoskeleton organization)|go:"GO:0040011"(locomotion)|go:"GO:0042247"(establishment of planar polarity of follicular epithelium)|go:"GO:0042995"(cell projection)|go:"GO:0043209"(myelin sheath)|go:"GO:0043297"(apical junction assembly)|refseq:NP_035845.1|entrezgene/locuslink:22388(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:1.6688116611539414 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:PVIlQDv8eXQrI3QBWJOjKlj/Zig10090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:Q60967 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-2552739|ensembl:ENSMUSP00000029666|uniprotkb:Q3U647 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:paps1_mouse(display_long)|uniprotkb:Asapk(gene name synonym)|uniprotkb:Atpsk1(gene name synonym)|uniprotkb:Papss(gene name synonym)|uniprotkb:Sulfurylase kinase 1(gene name synonym)|uniprotkb:Papss1(gene name)|psi-mi:Papss1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) refseq:NP_035993.1|ensembl:ENSMUSG00000028032(gene)|ensembl:ENSMUST00000029666(transcript)|go:"GO:0000103"(sulfate assimilation)|go:"GO:0004020"(adenylylsulfate kinase activity)|go:"GO:0004781"("sulfate adenylyltransferase (ATP) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0009336"("sulfate adenylyltransferase complex (ATP)")|go:"GO:0016779"(nucleotidyltransferase activity)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0050428"(3'-phosphoadenosine 5'-phosphosulfate biosynthetic process)|interpro:IPR002650(ATP-sulphurylase)|interpro:IPR002891(Adenylylsulphate kinase, C-terminal)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR015947(PUA-like)|interpro:IPR025980|interpro:IPR027417|mint:Q60967|reactome:R-MMU-174362|interpro:IPR024951|entrezgene/locuslink:23971(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:366.6018110774536 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:wLVJmhcbnAZZNMd/HhFs39meI5w10090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:P68369 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-400542|uniprotkb:P02551|uniprotkb:P05210|uniprotkb:P05212|uniprotkb:Q3TGF0|uniprotkb:Q3TIW2|uniprotkb:Q3TPJ1|uniprotkb:Q3ULN1|uniprotkb:Q5XJF8|ensembl:ENSMUSP00000094778 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:tba1a_mouse(display_long)|uniprotkb:Tuba1a(gene name)|psi-mi:Tuba1a(display_short)|uniprotkb:Tubulin alpha-1 chain(gene name synonym)|uniprotkb:Alpha-tubulin 1(gene name synonym)|uniprotkb:Alpha-tubulin isotype M-alpha-1(gene name synonym)|uniprotkb:Tuba1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) refseq:NP_035783.1|reactome:R-MMU-2467813|reactome:R-MMU-2500257|reactome:R-MMU-2565942|reactome:R-MMU-3371497|reactome:R-MMU-380259|reactome:R-MMU-380270|reactome:R-MMU-380284|reactome:R-MMU-380320|reactome:R-MMU-437239|reactome:R-MMU-5610787|reactome:R-MMU-5617833|reactome:R-MMU-5620912|reactome:R-MMU-5620924|reactome:R-MMU-5626467|reactome:R-MMU-5663220|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-6811436|reactome:R-MMU-68877|reactome:R-MMU-8852276|reactome:R-MMU-8854518|reactome:R-MMU-8955332|reactome:R-MMU-9646399|reactome:R-MMU-9648025|reactome:R-MMU-9668328|reactome:R-MMU-983189|ensembl:ENSMUSG00000072235(gene)|ensembl:ENSMUST00000097014(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005874"(microtubule)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0042802"(identical protein binding)|go:"GO:0043209"(myelin sheath)|go:"GO:0045121"(membrane raft)|go:"GO:0050807"(regulation of synapse organization)|go:"GO:0055037"(recycling endosome)|interpro:IPR000217(Tubulin)|interpro:IPR002452(Alpha tubulin)|interpro:IPR003008(Tubulin/FtsZ, GTPase)|interpro:IPR008280(Tubulin/FtsZ, C-terminal)|interpro:IPR017975|interpro:IPR018316|interpro:IPR023123|interpro:IPR036525|interpro:IPR037103|mint:P68369|rcsb pdb:6JZD|reactome:R-MMU-190840|reactome:R-MMU-2132295|entrezgene/locuslink:22142(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:3.1319894541241906 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:1CzEzrf5y8hrQRPKgWQS1Wm1aCY10090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:Q91WD5 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-772751|uniprotkb:Q3U5Y9|uniprotkb:Q3UJX7|uniprotkb:Q99L23|uniprotkb:Q3TNA8|ensembl:ENSMUSP00000013737 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:ndus2_mouse(display_long)|uniprotkb:NADH-ubiquinone oxidoreductase 49 kDa subunit(gene name synonym)|uniprotkb:Complex I-49kD(gene name synonym)|uniprotkb:Ndufs2(gene name)|psi-mi:Ndufs2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) refseq:NP_694704.1|ensembl:ENSMUSG00000013593(gene)|ensembl:ENSMUST00000013737(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005747"(mitochondrial respiratory chain complex I)|go:"GO:0006120"(mitochondrial electron transport, NADH to ubiquinone)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0019826"(oxygen sensor activity)|go:"GO:0022008"(neurogenesis)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032981"(mitochondrial respiratory chain complex I assembly)|go:"GO:0042063"(gliogenesis)|go:"GO:0042775"(mitochondrial ATP synthesis coupled electron transport)|go:"GO:0046872"(metal ion binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051287"(NAD binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|go:"GO:0061351"(neural precursor cell proliferation)|go:"GO:0071453"(cellular response to oxygen levels)|interpro:IPR001135(NADH-ubiquinone oxidoreductase, chain 49kDa)|interpro:IPR014029(NADH-ubiquinone oxidoreductase, chain 49kDa, conserved site)|interpro:IPR022885|interpro:IPR029014|mint:Q91WD5|rcsb pdb:6G2J|rcsb pdb:6G72|rcsb pdb:6ZR2|rcsb pdb:6ZTQ|rcsb pdb:7AK5|rcsb pdb:7AK6|rcsb pdb:7B93|reactome:R-MMU-611105|reactome:R-MMU-6799198|entrezgene/locuslink:226646(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:9.822944241448432 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:dk8e26C1hIdTZvDnX5nE1n+juwk10090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:P62983 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-4282373|uniprotkb:P02248|uniprotkb:P02249|uniprotkb:P02250|uniprotkb:P49664|uniprotkb:P62991|uniprotkb:Q29120|uniprotkb:Q62317|uniprotkb:Q64223|uniprotkb:Q8VCH1|uniprotkb:Q91887|uniprotkb:Q91888|uniprotkb:Q9CXY4|uniprotkb:Q9CZM0|uniprotkb:Q9D1R5|uniprotkb:Q9D2W3|uniprotkb:Q9D8D9|uniprotkb:Q9ET23|uniprotkb:Q9ET24|uniprotkb:Q9Z0H9|ensembl:ENSMUSP00000099908|ensembl:ENSMUSP00000099909 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:rs27a_mouse(display_long)|uniprotkb:Rps27a(gene name)|psi-mi:Rps27a(display_short)|uniprotkb:Uba80(gene name synonym)|uniprotkb:Ubcep1(gene name synonym)|uniprotkb:Ubiquitin carboxyl extension protein 80(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) reactome:R-MMU-5689880|reactome:R-MMU-5689896|reactome:R-MMU-5689901|reactome:R-MMU-5693565|reactome:R-MMU-5696394|reactome:R-MMU-5696395|reactome:R-MMU-5696397|reactome:R-MMU-5696400|reactome:R-MMU-6781823|reactome:R-MMU-6782135|reactome:R-MMU-6782210|reactome:R-MMU-6783310|reactome:R-MMU-6791226|reactome:R-MMU-6804756|reactome:R-MMU-6804757|reactome:R-MMU-6804760|reactome:R-MMU-6807004|reactome:R-MMU-68827|reactome:R-MMU-68949|reactome:R-MMU-69017|reactome:R-MMU-5689877|reactome:R-MMU-69231|reactome:R-MMU-69481|reactome:R-MMU-69541|reactome:R-MMU-69601|reactome:R-MMU-72649|reactome:R-MMU-72689|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-75815|reactome:R-MMU-8849469|reactome:R-MMU-8852276|reactome:R-MMU-8854050|reactome:R-MMU-8856825|reactome:R-MMU-8856828|reactome:R-MMU-8863795|reactome:R-MMU-8866652|reactome:R-MMU-8866654|reactome:R-MMU-8939236|reactome:R-MMU-8939902|reactome:R-MMU-8941858|reactome:R-MMU-8948747|reactome:R-MMU-8948751|reactome:R-MMU-8951664|reactome:R-MMU-901032|reactome:R-MMU-9010553|reactome:R-MMU-9013507|reactome:R-MMU-9020702|reactome:R-MMU-9033241|reactome:R-MMU-912631|reactome:R-MMU-917729|reactome:R-MMU-917937|reactome:R-MMU-936440|reactome:R-MMU-936964|reactome:R-MMU-937039|reactome:R-MMU-937041|reactome:R-MMU-937042|reactome:R-MMU-8932339|reactome:R-MMU-937072|reactome:R-MMU-9645460|reactome:R-MMU-9648002|reactome:R-MMU-9664873|reactome:R-MMU-9705462|reactome:R-MMU-9706369|reactome:R-MMU-9708530|reactome:R-MMU-975144|reactome:R-MMU-975163|reactome:R-MMU-975956|reactome:R-MMU-975957|reactome:R-MMU-983168|reactome:R-MMU-9646399|ensembl:ENSMUSG00000020460(gene)|ensembl:ENSMUST00000102844(transcript)|ensembl:ENSMUST00000102845(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019941"(modification-dependent protein catabolic process)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0031386"(protein tag)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0043209"(myelin sheath)|go:"GO:0046872"(metal ion binding)|reactome:R-MMU-110320|interpro:IPR000626(Ubiquitin)|interpro:IPR002906(Ribosomal protein S27a)|interpro:IPR011332(Ribosomal protein, zinc-binding)|reactome:R-MMU-1169091|reactome:R-MMU-1234176|reactome:R-MMU-1253288|reactome:R-MMU-1295596|reactome:R-MMU-1358803|reactome:R-MMU-156827|reactome:R-MMU-168638|interpro:IPR019954|interpro:IPR019956|interpro:IPR029071|reactome:R-MMU-174048|reactome:R-MMU-174084|reactome:R-MMU-174154|reactome:R-MMU-174178|reactome:R-MMU-174184|reactome:R-MMU-179409|reactome:R-MMU-1799339|reactome:R-MMU-182971|reactome:R-MMU-187577|reactome:R-MMU-195253|reactome:R-MMU-201681|reactome:R-MMU-202424|reactome:R-MMU-205043|interpro:IPR038582|rcsb pdb:5GVI|reactome:R-MMU-209543|rcsb pdb:5XIS|rcsb pdb:5XIT|rcsb pdb:5XIU|reactome:R-MMU-209560|reactome:R-MMU-110312|reactome:R-MMU-110314|reactome:R-MMU-2173788|reactome:R-MMU-2173791|reactome:R-MMU-2173795|reactome:R-MMU-2173796|reactome:R-MMU-2467813|reactome:R-MMU-2559580|reactome:R-MMU-2559582|reactome:R-MMU-2559585|reactome:R-MMU-2565942|reactome:R-MMU-2672351|reactome:R-MMU-2871837|reactome:R-MMU-3134975|reactome:R-MMU-349425|reactome:R-MMU-3769402|reactome:R-MMU-382556|reactome:R-MMU-445989|reactome:R-MMU-450302|reactome:R-MMU-450321|reactome:R-MMU-450408|reactome:R-MMU-4608870|reactome:R-MMU-2122948|reactome:R-MMU-4641257|reactome:R-MMU-4641258|reactome:R-MMU-4641263|reactome:R-MMU-532668|reactome:R-MMU-5357905|reactome:R-MMU-5357956|reactome:R-MMU-5358346|reactome:R-MMU-5607761|reactome:R-MMU-5607764|reactome:R-MMU-5610780|reactome:R-MMU-5610785|reactome:R-MMU-5632684|reactome:R-MMU-5654726|reactome:R-MMU-5654727|reactome:R-MMU-5654732|reactome:R-MMU-5654733|reactome:R-MMU-5655862|reactome:R-MMU-5656121|reactome:R-MMU-5656169|reactome:R-MMU-5658442|reactome:R-MMU-5668541|reactome:R-MMU-5675221|reactome:R-MMU-5675482|reactome:R-MMU-5676590|reactome:R-MMU-5684264|reactome:R-MMU-5685942|reactome:R-MMU-5687128|reactome:R-MMU-5689603|refseq:NP_001029037.1|refseq:NP_077239.1|entrezgene/locuslink:78294(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:18.668056599294204 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:AkJxTgRFL5RT5jWk5i3y4zX5tfA10090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:Q9EQH3 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-775825|uniprotkb:Q61123|ensembl:ENSMUSP00000034131 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:vps35_mouse(display_long)|uniprotkb:Vesicle protein sorting 35(gene name synonym)|uniprotkb:Maternal-embryonic 3(gene name synonym)|uniprotkb:Vps35(gene name)|psi-mi:Vps35(display_short)|uniprotkb:Mem3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) refseq:NP_075373.1|dip:DIP-32210N|ensembl:ENSMUSG00000031696(gene)|ensembl:ENSMUST00000034131(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006624"(vacuolar protein processing)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007040"(lysosome organization)|go:"GO:0007416"(synapse assembly)|go:"GO:0010008"(endosome membrane)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010821"(regulation of mitochondrion organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030904"(retromer complex)|go:"GO:0030906"(retromer, cargo-selective complex)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0031648"(protein destabilization)|go:"GO:0031748"(D1 dopamine receptor binding)|go:"GO:0032268"(regulation of cellular protein metabolic process)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032463"(negative regulation of protein homooligomerization)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043653"(mitochondrial fragmentation involved in apoptotic process)|go:"GO:0045056"(transcytosis)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050882"(voluntary musculoskeletal movement)|go:"GO:0060161"(positive regulation of dopamine receptor signaling pathway)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061357"(positive regulation of Wnt protein secretion)|go:"GO:0090141"(positive regulation of mitochondrial fission)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:0090326"(positive regulation of locomotion involved in locomotory behavior)|go:"GO:0097422"(tubular endosome)|go:"GO:0098793"(presynapse)|go:"GO:0098794"(postsynapse)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099003"(vesicle-mediated transport in synapse)|go:"GO:0099073"(mitochondrion-derived vesicle)|go:"GO:0099074"(mitochondrion to lysosome transport)|go:"GO:0099639"(neurotransmitter receptor transport, endosome to plasma membrane)|go:"GO:1901215"(negative regulation of neuron death)|go:"GO:1902823"(negative regulation of late endosome to lysosome transport)|go:"GO:1902950"(regulation of dendritic spine maintenance)|go:"GO:1903181"(positive regulation of dopamine biosynthetic process)|go:"GO:1903364"(positive regulation of cellular protein catabolic process)|go:"GO:1903828"(negative regulation of protein localization)|go:"GO:1905166"(negative regulation of lysosomal protein catabolic process)|go:"GO:2000331"(regulation of terminal button organization)|interpro:IPR005378(Vacuolar protein sorting-associated protein 35)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR042491|mint:Q9EQH3|rcsb pdb:6VAB|rcsb pdb:6VAC|reactome:R-MMU-3238698|entrezgene/locuslink:65114(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:2.7000155296410866 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:dK5TqSajxrGKjiNwRjeZCV519XE10090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:P40142 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-494230|uniprotkb:Q3U7Y1|uniprotkb:Q3UK62|uniprotkb:Q545A1|uniprotkb:Q9ESA0|ensembl:ENSMUSP00000022529 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:tkt_mouse(display_long)|uniprotkb:P68(gene name synonym)|uniprotkb:Tkt(gene name)|psi-mi:Tkt(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) refseq:NP_033414.1|ensembl:ENSMUSG00000021957(gene)|ensembl:ENSMUST00000022529(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004802"(transketolase activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005777"(peroxisome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006098"(pentose-phosphate shunt)|go:"GO:0009052"(pentose-phosphate shunt, non-oxidative branch)|go:"GO:0016604"(nuclear body)|go:"GO:0030246"(carbohydrate binding)|go:"GO:0030976"(thiamine pyrophosphate binding)|go:"GO:0040008"(regulation of growth)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043209"(myelin sheath)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046166"(glyceraldehyde-3-phosphate biosynthetic process)|go:"GO:0046390"(ribose phosphate biosynthetic process)|go:"GO:0048029"(monosaccharide binding)|interpro:IPR005474(Transketolase, N-terminal)|interpro:IPR005475(Transketolase, central region)|interpro:IPR009014(Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II)|interpro:IPR020826|interpro:IPR029061|interpro:IPR033248|mint:P40142|reactome:R-MMU-163754|reactome:R-MMU-71336|entrezgene/locuslink:21881(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:1.6832702925106073 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:h2YT3KKVrgDmPcSbJmtevBv1CAI10090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:Q9CPP6 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-2934595|ensembl:ENSMUSP00000023851|uniprotkb:Q9CY90|uniprotkb:Q9D2P2|uniprotkb:Q9D703|uniprotkb:Q9D739 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:ndua5_mouse(display_long)|uniprotkb:Ndufa5(gene name)|psi-mi:Ndufa5(display_short)|uniprotkb:Complex I subunit B13(gene name synonym)|uniprotkb:Complex I-13kD-B(gene name synonym)|uniprotkb:NADH-ubiquinone oxidoreductase 13 kDa-B subunit(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) ensembl:ENSMUSG00000023089(gene)|ensembl:ENSMUST00000023851(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005747"(mitochondrial respiratory chain complex I)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0022904"(respiratory electron transport chain)|go:"GO:0032981"(mitochondrial respiratory chain complex I assembly)|go:"GO:0032991"(protein-containing complex)|go:"GO:0045271"(respiratory chain complex I)|interpro:IPR006806(ETC complex I subunit)|mint:Q9CPP6|rcsb pdb:6G2J|rcsb pdb:6G72|rcsb pdb:6ZR2|rcsb pdb:6ZTQ|rcsb pdb:7AK5|rcsb pdb:7AK6|rcsb pdb:7B93|reactome:R-MMU-611105|reactome:R-MMU-6799198|reactome:R-MMU-9013408|refseq:NP_080890.1|entrezgene/locuslink:68202(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:1.0551230857932343 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:XmfRnQ0vfDwf3KjUdlYymXdjfjM10090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:Q8VEM8 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-775967|uniprotkb:Q542V7|ensembl:ENSMUSP00000075987|ensembl:ENSMUSP00000132480 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:mpcp_mouse(display_long)|uniprotkb:Phosphate transport protein(gene name synonym)|uniprotkb:Solute carrier family 25 member 3(gene name synonym)|uniprotkb:Slc25a3(gene name)|psi-mi:Slc25a3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) refseq:NP_598429.1|dip:DIP-32038N|ensembl:ENSMUSG00000061904(gene)|ensembl:ENSMUST00000076694(transcript)|ensembl:ENSMUST00000164505(transcript)|go:"GO:0005315"(inorganic phosphate transmembrane transporter activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0015293"(symporter activity)|go:"GO:0031305"(integral component of mitochondrial inner membrane)|go:"GO:0035435"(phosphate ion transmembrane transport)|go:"GO:0043209"(myelin sheath)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:1990547"(mitochondrial phosphate ion transmembrane transport)|interpro:IPR018108|interpro:IPR023395|interpro:IPR044677|mint:Q8VEM8|entrezgene/locuslink:18674(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:7.719124128242704 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:6fSO1eOaHLRSJSNq/PWlTfVpsUA10090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P56371 uniprotkb:Q504M8 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 intact:EBI-11567634|ensembl:ENSMUSP00000046089 psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:rab26_mouse(display_long)|uniprotkb:Rab26(gene name)|psi-mi:Rab26(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567632|imex:IM-24977-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) refseq:NP_796349.1|ensembl:ENSMUSG00000079657(gene)|ensembl:ENSMUST00000035797(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019002"(GMP binding)|go:"GO:0030667"(secretory granule membrane)|go:"GO:0031226"(intrinsic component of plasma membrane)|go:"GO:0035272"(exocrine system development)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0099575"(regulation of protein catabolic process at presynapse, modulating synaptic transmission)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q504M8|reactome:R-MMU-8873719|entrezgene/locuslink:328778(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:5.381466890626702 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 rogid:rmv0KSaLCFvGxU4/FDCVBB2grVQ10090 intact-crc:D2C78B54E858075F|rigid:ubnrgd7fwIqrhDOvCR0lwsUVKpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P59279 uniprotkb:P35292 intact:EBI-11567554|uniprotkb:Q3TV67|ensembl:ENSMUSP00000022765|ensembl:ENSMUSP00000131145 intact:EBI-7527775|uniprotkb:Q921D2|intact:MINT-1340501|uniprotkb:Q9D723|ensembl:ENSMUSP00000027529|ensembl:ENSMUSP00000122178 psi-mi:rab2b_mouse(display_long)|uniprotkb:Rab2b(gene name)|psi-mi:Rab2b(display_short) psi-mi:rab17_mouse(display_long)|uniprotkb:Rab17(gene name)|psi-mi:Rab17(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567719|imex:IM-24977-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_766189.1|ensembl:ENSMUSG00000022159(gene)|ensembl:ENSMUST00000022765(transcript)|ensembl:ENSMUST00000167116(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|entrezgene/locuslink:76338(identity) refseq:NP_033024.1|refseq:NP_001153197.2|ensembl:ENSMUSG00000026304(gene)|ensembl:ENSMUST00000027529(transcript)|ensembl:ENSMUST00000131428(transcript)|go:"GO:0002415"(immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0032401"(establishment of melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0042470"(melanosome)|go:"GO:0045056"(transcytosis)|go:"GO:0046847"(filopodium assembly)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0051963"(regulation of synapse assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0043025"(neuronal cell body)|refseq:XP_006529326.1|entrezgene/locuslink:19329(identity) - - comment:mint|function:Might be involved in transcellular transport|author-confidence:44.096326615127296 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:pTSmtuIPKapOSYFu6AT8mwYLlMk10090 rogid:RFDfU0pQ5zfRfyNQaMS3dNqsBL810090 intact-crc:5F515FAAE46867FF|rigid:/PQId+g1/LRvhOnpvAxqyfZQZt4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P59279 uniprotkb:Q6PDM1 intact:EBI-11567554|uniprotkb:Q3TV67|ensembl:ENSMUSP00000022765|ensembl:ENSMUSP00000131145 intact:EBI-647298|uniprotkb:A3KFP2|uniprotkb:A3KFP4|uniprotkb:Q27QB3|uniprotkb:Q3TTE5|uniprotkb:Q80XS0|uniprotkb:Q8BPN3|uniprotkb:Q9D5C9|uniprotkb:Q9CXF9|ensembl:ENSMUSP00000042792 psi-mi:rab2b_mouse(display_long)|uniprotkb:Rab2b(gene name)|psi-mi:Rab2b(display_short) psi-mi:msl1_mouse(display_long)|uniprotkb:Male-specific lethal-1 homolog 1(gene name synonym)|uniprotkb:Hampin(gene name synonym)|uniprotkb:Msl1(gene name)|psi-mi:Msl1(display_short)|uniprotkb:Msl1l1(gene name synonym)|uniprotkb:Male-specific lethal 1-like 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567719|imex:IM-24977-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_766189.1|ensembl:ENSMUSG00000022159(gene)|ensembl:ENSMUST00000022765(transcript)|ensembl:ENSMUST00000167116(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|entrezgene/locuslink:76338(identity) refseq:NP_082998.2|refseq:XP_006534414.1|refseq:XP_011247586.1|ensembl:ENSMUSG00000052915(gene)|ensembl:ENSMUST00000037915(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0016607"(nuclear speck)|go:"GO:0043984"(histone H4-K16 acetylation)|go:"GO:0072487"(MSL complex)|interpro:IPR026711|interpro:IPR029332|interpro:IPR031840|rcsb pdb:2Y0M|rcsb pdb:2Y0N|reactome:R-MMU-3214847|entrezgene/locuslink:74026(identity) - - author-confidence:1.4351530383653537 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:pTSmtuIPKapOSYFu6AT8mwYLlMk10090 rogid:hDTSo9VwaBRE+xxSuqdxx6p1SjA10090 intact-crc:5F515FAAE46867FF|rigid:/PQId+g1/LRvhOnpvAxqyfZQZt4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P59279 uniprotkb:P29341 intact:EBI-11567554|uniprotkb:Q3TV67|ensembl:ENSMUSP00000022765|ensembl:ENSMUSP00000131145 intact:EBI-773902|uniprotkb:Q99L36|ensembl:ENSMUSP00000001809 psi-mi:rab2b_mouse(display_long)|uniprotkb:Rab2b(gene name)|psi-mi:Rab2b(display_short) psi-mi:pabp1_mouse(display_long)|uniprotkb:Pabpc1(gene name)|psi-mi:Pabpc1(display_short)|uniprotkb:Pabp1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567719|imex:IM-24977-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_766189.1|ensembl:ENSMUSG00000022159(gene)|ensembl:ENSMUST00000022765(transcript)|ensembl:ENSMUST00000167116(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|entrezgene/locuslink:76338(identity) dip:DIP-32127N|refseq:NP_032800.2|refseq:XP_011243641.1|ensembl:ENSMUSG00000022283(gene)|ensembl:ENSMUST00000001809(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008143"("poly(A) binding")|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0008380"(RNA splicing)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0030027"(lamellipodium)|go:"GO:0030425"(dendrite)|go:"GO:0031047"(gene silencing by RNA)|go:"GO:0031252"(cell leading edge)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0045070"(positive regulation of viral genome replication)|go:"GO:0045202"(synapse)|go:"GO:0060213"("positive regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1900153"(positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:1990124"(messenger ribonucleoprotein complex)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000623"(negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002004(Polyadenylate-binding protein/Hyperplastic disc protein)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR006515(Polyadenylate binding protein, human types 1, 2, 3, 4)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|interpro:IPR036053|mint:P29341|reactome:R-MMU-156827|reactome:R-MMU-429947|reactome:R-MMU-450408|reactome:R-MMU-72649|reactome:R-MMU-975956|reactome:R-MMU-975957|entrezgene/locuslink:18458(identity) - - author-confidence:1.600981044912793 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:pTSmtuIPKapOSYFu6AT8mwYLlMk10090 rogid:jvlQW6kphF2tkZwK72DtAXDPHvs10090 intact-crc:5F515FAAE46867FF|rigid:/PQId+g1/LRvhOnpvAxqyfZQZt4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P59279 uniprotkb:Q9D6Z1 intact:EBI-11567554|uniprotkb:Q3TV67|ensembl:ENSMUSP00000022765|ensembl:ENSMUSP00000131145 intact:EBI-527254|uniprotkb:Q3UD45|uniprotkb:Q8BVL1|uniprotkb:Q8VDT2|uniprotkb:Q99LT8|uniprotkb:Q9CT15|ensembl:ENSMUSP00000099487 psi-mi:rab2b_mouse(display_long)|uniprotkb:Rab2b(gene name)|psi-mi:Rab2b(display_short) psi-mi:nop56_mouse(display_long)|uniprotkb:Nop56(gene name)|psi-mi:Nop56(display_short)|uniprotkb:Nol5a(gene name synonym)|uniprotkb:Nucleolar protein 5A(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567719|imex:IM-24977-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_766189.1|ensembl:ENSMUSG00000022159(gene)|ensembl:ENSMUST00000022765(transcript)|ensembl:ENSMUST00000167116(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|entrezgene/locuslink:76338(identity) refseq:NP_077155.2|ensembl:ENSMUSG00000027405(gene)|ensembl:ENSMUST00000103198(transcript)|go:"GO:0001650"(fibrillar center)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0005737"(cytoplasm)|go:"GO:0030515"(snoRNA binding)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0070761"(pre-snoRNP complex)|go:"GO:1990226"(histone methyltransferase binding)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|mint:Q9D6Z1|reactome:R-MMU-6791226|entrezgene/locuslink:67134(identity) - - author-confidence:4.657285811441597 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:pTSmtuIPKapOSYFu6AT8mwYLlMk10090 rogid:5darNL7hBt/XPnvcm0hiVxx7WDY10090 intact-crc:5F515FAAE46867FF|rigid:/PQId+g1/LRvhOnpvAxqyfZQZt4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P59279 uniprotkb:P53994 intact:EBI-11567554|uniprotkb:Q3TV67|ensembl:ENSMUSP00000022765|ensembl:ENSMUSP00000131145 intact:EBI-444664|uniprotkb:Q3UK45|ensembl:ENSMUSP00000057664 psi-mi:rab2b_mouse(display_long)|uniprotkb:Rab2b(gene name)|psi-mi:Rab2b(display_short) psi-mi:rab2a_mouse(display_long)|uniprotkb:Rab2(gene name synonym)|uniprotkb:Rab2a(gene name)|psi-mi:Rab2a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567719|imex:IM-24977-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_766189.1|ensembl:ENSMUSG00000022159(gene)|ensembl:ENSMUST00000022765(transcript)|ensembl:ENSMUST00000167116(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|entrezgene/locuslink:76338(identity) refseq:NP_067493.1|ensembl:ENSMUSG00000047187(gene)|ensembl:ENSMUST00000060232(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007030"(Golgi organization)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019003"(GDP binding)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043025"(neuronal cell body)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P53994|reactome:R-MMU-162658|reactome:R-MMU-8873719|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|entrezgene/locuslink:59021(identity) - - author-confidence:262.08125750822444 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:pTSmtuIPKapOSYFu6AT8mwYLlMk10090 rogid:gBkMWVEMfkyF8vxEHTY8IM6VYAI10090 intact-crc:5F515FAAE46867FF|rigid:/PQId+g1/LRvhOnpvAxqyfZQZt4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P59279 uniprotkb:A2A935 intact:EBI-11567554|uniprotkb:Q3TV67|ensembl:ENSMUSP00000022765|ensembl:ENSMUSP00000131145 intact:EBI-6268248|ensembl:ENSMUSP00000030902|uniprotkb:Q69ZD6|uniprotkb:Q6PB79|uniprotkb:Q7TPF4 psi-mi:rab2b_mouse(display_long)|uniprotkb:Rab2b(gene name)|psi-mi:Rab2b(display_short) psi-mi:prd16_mouse(display_long)|uniprotkb:PR domain zinc finger protein 16(gene name synonym)|uniprotkb:Prdm16(gene name)|psi-mi:Prdm16(display_short)|uniprotkb:Kiaa1675(gene name synonym)|uniprotkb:Mel1(gene name synonym)|uniprotkb:PR domain-containing protein 16(gene name synonym)|uniprotkb:Transcription factor MEL1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567719|imex:IM-24977-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_766189.1|ensembl:ENSMUSG00000022159(gene)|ensembl:ENSMUST00000022765(transcript)|ensembl:ENSMUST00000167116(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|entrezgene/locuslink:76338(identity) ensembl:ENSMUSG00000039410(gene)|ensembl:ENSMUST00000030902(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016235"(aggresome)|go:"GO:0017053"(transcription repressor complex)|go:"GO:0019827"(stem cell population maintenance)|go:"GO:0022008"(neurogenesis)|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030853"(negative regulation of granulocyte differentiation)|go:"GO:0035019"(somatic stem cell population maintenance)|go:"GO:0043457"(regulation of cellular respiration)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0043586"(tongue development)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046332"(SMAD binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0046974"("histone methyltransferase activity (H3-K9 specific)")|go:"GO:0048468"(cell development)|go:"GO:0050872"(white fat cell differentiation)|go:"GO:0050873"(brown fat cell differentiation)|go:"GO:0060021"(roof of mouth development)|go:"GO:0070828"(heterochromatin organization)|go:"GO:0090336"(positive regulation of brown fat cell differentiation)|go:"GO:0120162"(positive regulation of cold-induced thermogenesis)|go:"GO:0140297"(DNA-binding transcription factor binding)|interpro:IPR001214(SET)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|interpro:IPR044410|mint:A2A935|reactome:R-MMU-3214841|refseq:NP_001277955.1|refseq:NP_001277958.1|refseq:XP_006539236.1|refseq:NP_081780.3|dip:DIP-60593N|entrezgene/locuslink:70673(identity) - - author-confidence:1.142945883663353 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:pTSmtuIPKapOSYFu6AT8mwYLlMk10090 rogid:IIoKgZ/wtPhFX+h3JHXbeH2HEpg10090 intact-crc:5F515FAAE46867FF|rigid:/PQId+g1/LRvhOnpvAxqyfZQZt4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61021 uniprotkb:P59235 intact:EBI-8320093|intact:MINT-1865771|uniprotkb:P35239|uniprotkb:P35277|ensembl:ENSMUSP00000000727 intact:EBI-8460031|intact:MINT-4104279|uniprotkb:E9QPN3|ensembl:ENSMUSP00000046732 psi-mi:rab5b_mouse(display_long)|uniprotkb:Rab5b(gene name)|psi-mi:Rab5b(display_short) psi-mi:nup43_mouse(display_long)|uniprotkb:Nup43(gene name)|psi-mi:Nup43(display_short)|uniprotkb:Nup107-160 subcomplex subunit Nup43(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567757|imex:IM-24977-22 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_803130.1|refseq:XP_006513447.1|ensembl:ENSMUSG00000000711(gene)|ensembl:ENSMUST00000000727(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61021|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19344(identity) refseq:NP_663752.2|ensembl:ENSMUSG00000040034(gene)|ensembl:ENSMUST00000040135(transcript)|go:"GO:0000776"(kinetochore)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0007059"(chromosome segregation)|go:"GO:0015031"(protein transport)|go:"GO:0016607"(nuclear speck)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0051028"(mRNA transport)|go:"GO:0051301"(cell division)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322|mint:P59235|reactome:R-MMU-141444|reactome:R-MMU-159227|reactome:R-MMU-159230|reactome:R-MMU-159231|reactome:R-MMU-159236|reactome:R-MMU-170822|reactome:R-MMU-191859|reactome:R-MMU-2467813|reactome:R-MMU-2500257|reactome:R-MMU-3108214|reactome:R-MMU-3232142|reactome:R-MMU-3301854|reactome:R-MMU-3371453|reactome:R-MMU-4085377|reactome:R-MMU-4551638|reactome:R-MMU-4570464|reactome:R-MMU-4615885|reactome:R-MMU-5578749|reactome:R-MMU-5663220|reactome:R-MMU-68877|reactome:R-MMU-9615933|reactome:R-MMU-9648025|entrezgene/locuslink:69912(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic comment:mint|function:May mediate the assembly of subdomains of the NPC or facilitate the interaction of transport complexes with the NPC|author-confidence:3.9286421917143115 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:jm+x3SYDL+i+/BrDFnp44kxlHUM10090 rogid:w3Xce/jXFL8Qoghmmrisa0M+FL010090 intact-crc:983EFEBDB95991E7|rigid:CWNWEhg9Jrjfy+5cfI5YdGT3pNw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61021 uniprotkb:Q9CR80 intact:EBI-8320093|intact:MINT-1865771|uniprotkb:P35239|uniprotkb:P35277|ensembl:ENSMUSP00000000727 intact:EBI-8586255|ensembl:ENSMUSP00000003123|intact:UNK-5540354|uniprotkb:Q8K5E4 psi-mi:rab5b_mouse(display_long)|uniprotkb:Rab5b(gene name)|psi-mi:Rab5b(display_short) psi-mi:fa32a_mouse(display_long)|uniprotkb:Otag12(gene name synonym)|uniprotkb:Ovarian tumor associated gene 12(gene name synonym)|uniprotkb:MNCb-3154(orf name)|uniprotkb:Fam32a(gene name)|psi-mi:Fam32a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567757|imex:IM-24977-22 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_803130.1|refseq:XP_006513447.1|ensembl:ENSMUSG00000000711(gene)|ensembl:ENSMUST00000000727(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61021|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19344(identity) ensembl:ENSMUSG00000003039(gene)|ensembl:ENSMUST00000003123(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006915"(apoptotic process)|go:"GO:0007049"(cell cycle)|interpro:IPR013865(Protein of unknown function DUF1754, eukaryotic)|refseq:NP_080731.1|entrezgene/locuslink:67922(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic comment:mint|author-confidence:2.029920441827214 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:jm+x3SYDL+i+/BrDFnp44kxlHUM10090 rogid:NB/GdFsA+ZC6MYUA30DZFabkEmc10090 intact-crc:983EFEBDB95991E7|rigid:CWNWEhg9Jrjfy+5cfI5YdGT3pNw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61021 uniprotkb:Q5F2E7 intact:EBI-8320093|intact:MINT-1865771|uniprotkb:P35239|uniprotkb:P35277|ensembl:ENSMUSP00000000727 intact:EBI-11567759|uniprotkb:Q80TF1|uniprotkb:Q3V195|uniprotkb:Q3TCE2|ensembl:ENSMUSP00000098365 psi-mi:rab5b_mouse(display_long)|uniprotkb:Rab5b(gene name)|psi-mi:Rab5b(display_short) psi-mi:nufp2_mouse(display_long)|uniprotkb:82 kDa FMRP-interacting protein(gene name synonym)|uniprotkb:FMRP-interacting protein 2(gene name synonym)|uniprotkb:Kiaa1321(gene name synonym)|uniprotkb:Nufip2(gene name)|psi-mi:Nufip2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567757|imex:IM-24977-22 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_803130.1|refseq:XP_006513447.1|ensembl:ENSMUSG00000000711(gene)|ensembl:ENSMUST00000000727(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61021|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19344(identity) refseq:NP_001019376.1|refseq:XP_006534125.1|ensembl:ENSMUSG00000037857(gene)|ensembl:ENSMUST00000100802(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0016604"(nuclear body)|go:"GO:0042788"(polysomal ribosome)|interpro:IPR032747|mint:Q5F2E7|entrezgene/locuslink:68564(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:2.029920441827214 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:jm+x3SYDL+i+/BrDFnp44kxlHUM10090 rogid:rckz1rTUY3/RppScoXLaw1Z9ipU10090 intact-crc:983EFEBDB95991E7|rigid:CWNWEhg9Jrjfy+5cfI5YdGT3pNw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61021 uniprotkb:O55222 intact:EBI-8320093|intact:MINT-1865771|uniprotkb:P35239|uniprotkb:P35277|ensembl:ENSMUSP00000000727 intact:EBI-6690138|uniprotkb:Q78KK2|ensembl:ENSMUSP00000033182|ensembl:ENSMUSP00000130341 psi-mi:rab5b_mouse(display_long)|uniprotkb:Rab5b(gene name)|psi-mi:Rab5b(display_short) psi-mi:ilk_mouse(display_long)|uniprotkb:59 kDa serine/threonine-protein kinase(gene name synonym)|uniprotkb:Beta-integrin-linked kinase(gene name synonym)|uniprotkb:ILK-1(gene name synonym)|uniprotkb:ILK-2(gene name synonym)|uniprotkb:ILK1(gene name synonym)|uniprotkb:ILK2(gene name synonym)|uniprotkb:p59ILK(gene name synonym)|uniprotkb:Ilk(gene name)|psi-mi:Ilk(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567757|imex:IM-24977-22 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_803130.1|refseq:XP_006513447.1|ensembl:ENSMUSG00000000711(gene)|ensembl:ENSMUST00000000727(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61021|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19344(identity) refseq:NP_001155196.1|refseq:NP_034692.2|ensembl:ENSMUSG00000030890(gene)|ensembl:ENSMUST00000033182(transcript)|ensembl:ENSMUST00000163389(transcript)|go:"GO:0000902"(cell morphogenesis)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001658"(branching involved in ureteric bud morphogenesis)|go:"GO:0001725"(stress fiber)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0001954"(positive regulation of cell-matrix adhesion)|go:"GO:0003151"(outflow tract morphogenesis)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005178"(integrin binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005925"(focal adhesion)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007160"(cell-matrix adhesion)|go:"GO:0007229"(integrin-mediated signaling pathway)|go:"GO:0007569"(cell aging)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0009967"(positive regulation of signal transduction)|go:"GO:0010667"(negative regulation of cardiac muscle cell apoptotic process)|go:"GO:0010761"(fibroblast migration)|go:"GO:0014044"(Schwann cell development)|go:"GO:0014912"(negative regulation of smooth muscle cell migration)|go:"GO:0017124"(SH3 domain binding)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021675"(nerve development)|go:"GO:0022011"(myelination in peripheral nervous system)|go:"GO:0030017"(sarcomere)|go:"GO:0030027"(lamellipodium)|go:"GO:0030030"(cell projection organization)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030424"(axon)|go:"GO:0030513"(positive regulation of BMP signaling pathway)|go:"GO:0032288"(myelin assembly)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042327"(positive regulation of phosphorylation)|go:"GO:0043034"(costamere)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043195"(terminal bouton)|go:"GO:0043198"(dendritic shaft)|go:"GO:0043406"(positive regulation of MAP kinase activity)|go:"GO:0043410"(positive regulation of MAPK cascade)|go:"GO:0043491"(protein kinase B signaling)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045197"(establishment or maintenance of epithelial cell apical/basal polarity)|go:"GO:0045663"(positive regulation of myoblast differentiation)|go:"GO:0045669"(positive regulation of osteoblast differentiation)|go:"GO:0045773"(positive regulation of axon extension)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0048662"(negative regulation of smooth muscle cell proliferation)|go:"GO:0048812"(neuron projection morphogenesis)|go:"GO:0043025"(neuronal cell body)|go:"GO:0050772"(positive regulation of axonogenesis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:0097435"(supramolecular fiber organization)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1900026"(positive regulation of substrate adhesion-dependent cell spreading)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:2000178"(negative regulation of neural precursor cell proliferation)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001245(Tyrosine protein kinase)|interpro:IPR002110(Ankyrin)|interpro:IPR011009(Protein kinase-like)|interpro:IPR020683|interpro:IPR035692|interpro:IPR036770|mint:O55222|reactome:R-MMU-446343|reactome:R-MMU-446353|dip:DIP-41971N|entrezgene/locuslink:16202(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:14.650342098357964 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:jm+x3SYDL+i+/BrDFnp44kxlHUM10090 rogid:9kMagkwUrtq1XaI+9PXPJ21hHY810090 intact-crc:983EFEBDB95991E7|rigid:CWNWEhg9Jrjfy+5cfI5YdGT3pNw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61021 uniprotkb:Q80TP3 intact:EBI-8320093|intact:MINT-1865771|uniprotkb:P35239|uniprotkb:P35277|ensembl:ENSMUSP00000000727 intact:EBI-2553642|uniprotkb:Q810V6|uniprotkb:Q698K9|uniprotkb:Q9CXE9|uniprotkb:Q6PFQ9|uniprotkb:Q80VL4|uniprotkb:Q6PEQ8 psi-mi:rab5b_mouse(display_long)|uniprotkb:Rab5b(gene name)|psi-mi:Rab5b(display_short) psi-mi:ubr5_mouse(display_long)|uniprotkb:Ubr5(gene name)|psi-mi:Ubr5(display_short)|uniprotkb:Edd(gene name synonym)|uniprotkb:Edd1(gene name synonym)|uniprotkb:Kiaa0896(gene name synonym)|uniprotkb:E3 ubiquitin-protein ligase, HECT domain-containing 1(gene name synonym)|uniprotkb:Hyperplastic discs protein homolog(gene name synonym)|uniprotkb:HECT-type E3 ubiquitin transferase UBR5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567757|imex:IM-24977-22 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_803130.1|refseq:XP_006513447.1|ensembl:ENSMUSG00000000711(gene)|ensembl:ENSMUST00000000727(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61021|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19344(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0032700"(negative regulation of interleukin-17 production)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034450"(ubiquitin-ubiquitin ligase activity)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050847"(progesterone receptor signaling pathway)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:1901315"(negative regulation of histone H2A K63-linked ubiquitination)|go:"GO:2000779"(regulation of double-strand break repair)|go:"GO:2000780"(negative regulation of double-strand break repair)|interpro:IPR000569(HECT)|interpro:IPR002004(Polyadenylate-binding protein/Hyperplastic disc protein)|interpro:IPR003126(Zinc finger, N-recognin)|interpro:IPR009091(Regulator of chromosome condensation/beta-lactamase-inhibitor protein II)|interpro:IPR024725|interpro:IPR035983|interpro:IPR036053|go:"GO:0061630"(ubiquitin protein ligase activity)|refseq:NP_001074828.2|refseq:NP_001106192.1|dip:DIP-56890N|mint:Q80TP3|entrezgene/locuslink:70790(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:1.4994136221727574 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:jm+x3SYDL+i+/BrDFnp44kxlHUM10090 rogid:iUtn1CtWFtqWQV3UH06xJ5R5Ux010090 intact-crc:983EFEBDB95991E7|rigid:CWNWEhg9Jrjfy+5cfI5YdGT3pNw false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61027 uniprotkb:Q9DD03 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567802|imex:IM-24977-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) - - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint|author-confidence:7.9272570191300185 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 intact-crc:6D32347E16621EF2|rigid:hMHHAmWjyX6YDDWveDgrEHCAPio false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61027 uniprotkb:Q3UHA3 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 intact:EBI-11567804|uniprotkb:Q8C7R3|uniprotkb:Q8VEA5|uniprotkb:A2ARM0|uniprotkb:Q6ZPH3|uniprotkb:Q8BHQ1|uniprotkb:Q8CA88|uniprotkb:Q8C7U2|ensembl:ENSMUSP00000037543 psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:sptcs_mouse(display_long)|uniprotkb:Kiaa1840(gene name synonym)|uniprotkb:Spastic paraplegia 11 protein homolog(gene name synonym)|uniprotkb:Spg11(gene name)|psi-mi:Spg11(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567802|imex:IM-24977-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) refseq:NP_663506.2|ensembl:ENSMUSG00000033396(gene)|ensembl:ENSMUST00000036450(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0007040"(lysosome organization)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008088"(axo-dendritic transport)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0045202"(synapse)|go:"GO:0048167"(regulation of synaptic plasticity)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048675"(axon extension)|go:"GO:0090389"(phagosome-lysosome fusion involved in apoptotic cell clearance)|go:"GO:0090659"(walking behavior)|interpro:IPR028103|interpro:IPR028107|entrezgene/locuslink:214585(identity) - - author-confidence:31.394865222350543 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 rogid:PjW3T/UDdzIKwLnNdfz9eWgEjW410090 intact-crc:6D32347E16621EF2|rigid:hMHHAmWjyX6YDDWveDgrEHCAPio false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61027 uniprotkb:O88990 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 intact:EBI-445061|uniprotkb:Q14DS8|ensembl:ENSMUSP00000006626 psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:actn3_mouse(display_long)|uniprotkb:Alpha-actinin skeletal muscle isoform 3(gene name synonym)|uniprotkb:F-actin cross-linking protein(gene name synonym)|uniprotkb:Actn3(gene name)|psi-mi:Actn3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567802|imex:IM-24977-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) refseq:NP_038484.1|go:"GO:1900159"(positive regulation of bone mineralization involved in bone maturation)|go:"GO:1901078"(negative regulation of relaxation of muscle)|go:"GO:1903715"(regulation of aerobic respiration)|go:"GO:1904025"(positive regulation of glucose catabolic process to lactate via pyruvate)|interpro:IPR001589(Actinin-type, actin-binding, conserved site)|interpro:IPR001715(Calponin-like actin-binding)|interpro:IPR002017(Spectrin repeat)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR014837(EF-hand, Ca insensitive)|interpro:IPR018159|interpro:IPR036872|mint:O88990|reactome:R-MMU-390522|go:"GO:0120163"(negative regulation of cold-induced thermogenesis)|ensembl:ENSMUSG00000006457(gene)|ensembl:ENSMUST00000006626(transcript)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005865"(striated muscle thin filament)|go:"GO:0005903"(brush border)|go:"GO:0005925"(focal adhesion)|go:"GO:0006936"(muscle contraction)|go:"GO:0014728"(regulation of the force of skeletal muscle contraction)|go:"GO:0014732"(skeletal muscle atrophy)|go:"GO:0014883"(transition between fast and slow fiber)|go:"GO:0014894"(response to denervation involved in regulation of muscle adaptation)|go:"GO:0030017"(sarcomere)|go:"GO:0030018"(Z disc)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031448"(positive regulation of fast-twitch skeletal muscle fiber contraction)|go:"GO:0042802"(identical protein binding)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045820"(negative regulation of glycolytic process)|go:"GO:0048041"(focal adhesion assembly)|go:"GO:0048633"(positive regulation of skeletal muscle tissue growth)|go:"GO:0048743"(positive regulation of skeletal muscle fiber development)|go:"GO:0051015"(actin filament binding)|go:"GO:0060349"(bone morphogenesis)|go:"GO:0070885"(negative regulation of calcineurin-NFAT signaling cascade)|go:"GO:0090257"(regulation of muscle system process)|go:"GO:0090324"(negative regulation of oxidative phosphorylation)|entrezgene/locuslink:11474(identity) - - author-confidence:1.3280520653530137 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 rogid:gNyxg0mfjJPpTG9Ac/DclA6taXQ10090 intact-crc:6D32347E16621EF2|rigid:hMHHAmWjyX6YDDWveDgrEHCAPio false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61027 uniprotkb:Q8C547 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 intact:EBI-912125|uniprotkb:Q3TPS4|uniprotkb:Q5PRF1|uniprotkb:Q8C6W1|uniprotkb:Q8C773|uniprotkb:Q5DTY0|ensembl:ENSMUSP00000094882 psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:htr5b_mouse(display_long)|uniprotkb:Heatr5b(gene name)|psi-mi:Heatr5b(display_short)|uniprotkb:Kiaa1414(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567802|imex:IM-24977-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) refseq:NP_001074648.1|ensembl:ENSMUSG00000039414(gene)|ensembl:ENSMUST00000097281(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0006897"(endocytosis)|go:"GO:0008104"(protein localization)|go:"GO:0015031"(protein transport)|go:"GO:0030136"(clathrin-coated vesicle)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040108|mint:Q8C547|entrezgene/locuslink:320473(identity) - - author-confidence:7.878526076409404 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 rogid:2xZ++qMX5znfuZfOS9iDBcBdO8A10090 intact-crc:6D32347E16621EF2|rigid:hMHHAmWjyX6YDDWveDgrEHCAPio false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61027 uniprotkb:Q9D289 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 intact:EBI-6160764|ensembl:ENSMUSP00000021380 psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:tpc6b_mouse(display_long)|uniprotkb:Trappc6b(gene name)|psi-mi:Trappc6b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567802|imex:IM-24977-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) refseq:NP_001293146.1|refseq:NP_001293147.1|refseq:NP_084333.1|ensembl:ENSMUSG00000020993(gene)|ensembl:ENSMUST00000021380(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007399"(nervous system development)|go:"GO:0030008"(TRAPP complex)|go:"GO:0043087"(regulation of GTPase activity)|interpro:IPR007194("Transport protein particle (TRAPP) component, Bet3")|interpro:IPR024096|interpro:IPR037992|reactome:R-MMU-204005|reactome:R-MMU-8876198|entrezgene/locuslink:78232(identity) - - author-confidence:2.6343269328601853 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 rogid:zC35JuVZ9zxvebpK/eKfT/QnkCs10090 intact-crc:6D32347E16621EF2|rigid:hMHHAmWjyX6YDDWveDgrEHCAPio false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61027 uniprotkb:P33610 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 intact:EBI-848748|uniprotkb:Q3U4Z3|ensembl:ENSMUSP00000027312 psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:pri2_mouse(display_long)|uniprotkb:DNA primase 58 kDa subunit(gene name synonym)|uniprotkb:Prim2(gene name)|psi-mi:Prim2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567802|imex:IM-24977-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) refseq:NP_032948.1|ensembl:ENSMUSG00000026134(gene)|ensembl:ENSMUST00000027312(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005658"("alpha DNA polymerase:primase complex")|go:"GO:0006269"(DNA replication, synthesis of RNA primer)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|go:"GO:0071667"(DNA/RNA hybrid binding)|interpro:IPR007238(DNA primase, large subunit, eukaryotic/archaeal)|interpro:IPR016558(DNA primase, large subunit, eukaryotic)|reactome:R-MMU-113501|reactome:R-MMU-174411|reactome:R-MMU-174430|reactome:R-MMU-68952|reactome:R-MMU-68962|reactome:R-MMU-69091|reactome:R-MMU-69166|reactome:R-MMU-69183|go:"GO:0046872"(metal ion binding)|entrezgene/locuslink:19076(identity) - - author-confidence:1.3262670491361412 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 rogid:OwusfGlmgCZF5zSS5MON0GSGwz810090 intact-crc:6D32347E16621EF2|rigid:hMHHAmWjyX6YDDWveDgrEHCAPio false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61027 uniprotkb:Q6PHN9 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 intact:EBI-1373353|ensembl:ENSMUSP00000031492 psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567802|imex:IM-24977-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) - - author-confidence:7.165590599390596 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 intact-crc:6D32347E16621EF2|rigid:hMHHAmWjyX6YDDWveDgrEHCAPio false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61027 uniprotkb:P55258 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 intact:EBI-398411|uniprotkb:Q8VCF6|ensembl:ENSMUSP00000003121 psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:rab8a_mouse(display_long)|uniprotkb:Rab8a(gene name)|psi-mi:Rab8a(display_short)|uniprotkb:Mel(gene name synonym)|uniprotkb:Rab8(gene name synonym)|uniprotkb:Oncogene c-mel(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567802|imex:IM-24977-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) refseq:NP_075615.2|dip:DIP-31053N|ensembl:ENSMUSG00000003037(gene)|ensembl:ENSMUST00000003121(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0014069"(postsynaptic density)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0045202"(synapse)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097546"(ciliary base)|go:"GO:0097730"(non-motile cilium)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098969"(neurotransmitter receptor transport to postsynaptic membrane)|go:"GO:0099003"(vesicle-mediated transport in synapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P55258|rcsb pdb:2FU5|reactome:R-MMU-2565942|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0098978"(glutamatergic synapse)|entrezgene/locuslink:17274(identity) - - author-confidence:1.858380383385783 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 rogid:SE+1h+U6C8cAN2UTBIDapsUt4zA10090 intact-crc:6D32347E16621EF2|rigid:hMHHAmWjyX6YDDWveDgrEHCAPio false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61027 uniprotkb:P62823 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567802|imex:IM-24977-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) - - author-confidence:1.0686892090414641 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 intact-crc:6D32347E16621EF2|rigid:hMHHAmWjyX6YDDWveDgrEHCAPio false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61027 uniprotkb:Q8BHC1 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567802|imex:IM-24977-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - - author-confidence:1.0299543571353347 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:6D32347E16621EF2|rigid:hMHHAmWjyX6YDDWveDgrEHCAPio false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61027 uniprotkb:Q3TTL0 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 intact:EBI-11567797|uniprotkb:Q8VE03|uniprotkb:A9C482|ensembl:ENSMUSP00000076255 psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:cc038_mouse(display_long) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567802|imex:IM-24977-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) refseq:NP_080549.1|ensembl:ENSMUSG00000059920(gene)|ensembl:ENSMUST00000076991(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006915"(apoptotic process)|go:"GO:0043065"(positive regulation of apoptotic process)|interpro:IPR026698|interpro:IPR032710|entrezgene/locuslink:67609(identity) - - author-confidence:9.465940998073966 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 rogid:DNEGO4iNVOePVevZvgcIPc0kh+U10090 intact-crc:6D32347E16621EF2|rigid:hMHHAmWjyX6YDDWveDgrEHCAPio false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61027 uniprotkb:P62849 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 intact:EBI-11567545|uniprotkb:P16632|uniprotkb:Q6PDB5|uniprotkb:Q642L0|ensembl:ENSMUSP00000152944 psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:rs24_mouse(display_long)|uniprotkb:Rps24(gene name)|psi-mi:Rps24(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567802|imex:IM-24977-23 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) refseq:NP_035427.2|refseq:NP_997517.1|refseq:NP_997518.1|refseq:XP_006518797.1|interpro:IPR001976(Ribosomal protein S24e)|interpro:IPR012678(Ribosomal protein L23/L15e, core)|interpro:IPR018098|mint:P62849|reactome:R-MMU-156827|reactome:R-MMU-1799339|reactome:R-MMU-6791226|reactome:R-MMU-72649|reactome:R-MMU-72689|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-975956|reactome:R-MMU-975957|ensembl:ENSMUSG00000025290(gene)|ensembl:ENSMUST00000225023(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0006412"(translation)|go:"GO:0015935"(small ribosomal subunit)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0034101"(erythrocyte homeostasis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|entrezgene/locuslink:20088(identity) - - author-confidence:8.699812037792363 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 rogid:M/qkRxabHx9PFaOM7EwKDOOwu7Q10090 intact-crc:6D32347E16621EF2|rigid:hMHHAmWjyX6YDDWveDgrEHCAPio false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62492 uniprotkb:Q9DB54 intact:EBI-770256|uniprotkb:P24410|uniprotkb:Q3V1Z6|uniprotkb:Q9JLX1|ensembl:ENSMUSP00000129163 intact:EBI-11567974|uniprotkb:Q6PFA4|uniprotkb:Q3UD74|ensembl:ENSMUSP00000031419 psi-mi:rb11a_mouse(display_long)|uniprotkb:Rab11a(gene name)|psi-mi:Rab11a(display_short)|uniprotkb:Rab11(gene name synonym) psi-mi:f216a_mouse(display_long)|uniprotkb:Fam216a(gene name)|psi-mi:Fam216a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567972|imex:IM-24977-26 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_059078.2|ensembl:ENSMUSG00000004771(gene)|ensembl:ENSMUST00000172298(transcript)|go:"GO:0000922"(spindle pole)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005771"(multivesicular body)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005813"(centrosome)|go:"GO:0005828"(kinetochore microtubule)|go:"GO:0006887"(exocytosis)|go:"GO:0007080"(mitotic metaphase plate congression)|go:"GO:0008017"(microtubule binding)|go:"GO:0010634"(positive regulation of epithelial cell migration)|go:"GO:0010796"(regulation of multivesicular body size)|go:"GO:0010971"(positive regulation of G2/M transition of mitotic cell cycle)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030133"(transport vesicle)|go:"GO:0030424"(axon)|go:"GO:0030953"(astral microtubule organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032402"(melanosome transport)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034451"(centriolar satellite)|go:"GO:0036258"(multivesicular body assembly)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045773"(positive regulation of axon extension)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0051650"(establishment of vesicle localization)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060627"(regulation of vesicle-mediated transport)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072594"(establishment of protein localization to organelle)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0090307"(mitotic spindle assembly)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099003"(vesicle-mediated transport in synapse)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:1903078"(positive regulation of protein localization to plasma membrane)|go:"GO:1990182"(exosomal secretion)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62492|reactome:R-MMU-432040|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|go:"GO:0034394"(protein localization to cell surface)|entrezgene/locuslink:53869(identity) refseq:NP_081159.1|ensembl:ENSMUSG00000029463(gene)|ensembl:ENSMUST00000031419(transcript)|interpro:IPR029373|entrezgene/locuslink:68948(identity) - - author-confidence:1.3451882210349881 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:FjkzGzN2VDTyv94M9vD/EJC2qoU10090 rogid:esvXrLMS1/ukGuV5x3AuEOI+u0s10090 intact-crc:E0741D7A7A770D0C|rigid:u0jBC8jUQnYP/lH3sHhXdDh8K3Q false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62492 uniprotkb:Q9D4V7 intact:EBI-770256|uniprotkb:P24410|uniprotkb:Q3V1Z6|uniprotkb:Q9JLX1|ensembl:ENSMUSP00000129163 intact:EBI-11567455|uniprotkb:Q9D0M6|uniprotkb:Q8BMU2|ensembl:ENSMUSP00000023524 psi-mi:rb11a_mouse(display_long)|uniprotkb:Rab11a(gene name)|psi-mi:Rab11a(display_short)|uniprotkb:Rab11(gene name synonym) psi-mi:rabl3_mouse(display_long)|uniprotkb:Rabl3(gene name)|psi-mi:Rabl3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567972|imex:IM-24977-26 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_059078.2|ensembl:ENSMUSG00000004771(gene)|ensembl:ENSMUST00000172298(transcript)|go:"GO:0000922"(spindle pole)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005771"(multivesicular body)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005813"(centrosome)|go:"GO:0005828"(kinetochore microtubule)|go:"GO:0006887"(exocytosis)|go:"GO:0007080"(mitotic metaphase plate congression)|go:"GO:0008017"(microtubule binding)|go:"GO:0010634"(positive regulation of epithelial cell migration)|go:"GO:0010796"(regulation of multivesicular body size)|go:"GO:0010971"(positive regulation of G2/M transition of mitotic cell cycle)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030133"(transport vesicle)|go:"GO:0030424"(axon)|go:"GO:0030953"(astral microtubule organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032402"(melanosome transport)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034451"(centriolar satellite)|go:"GO:0036258"(multivesicular body assembly)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045773"(positive regulation of axon extension)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0051650"(establishment of vesicle localization)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060627"(regulation of vesicle-mediated transport)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072594"(establishment of protein localization to organelle)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0090307"(mitotic spindle assembly)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099003"(vesicle-mediated transport in synapse)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:1903078"(positive regulation of protein localization to plasma membrane)|go:"GO:1990182"(exosomal secretion)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62492|reactome:R-MMU-432040|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|go:"GO:0034394"(protein localization to cell surface)|entrezgene/locuslink:53869(identity) refseq:NP_001035964.1|ensembl:ENSMUSG00000022827(gene)|ensembl:ENSMUST00000023524(transcript)|go:"GO:0001779"(natural killer cell differentiation)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030183"(B cell differentiation)|go:"GO:0033077"(T cell differentiation in thymus)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0046578"(regulation of Ras protein signal transduction)|go:"GO:0050821"(protein stabilization)|go:"GO:1903059"(regulation of protein lipidation)|interpro:IPR027417|rcsb pdb:6VIH|rcsb pdb:6VII|rcsb pdb:6VIJ|rcsb pdb:6VIK|entrezgene/locuslink:67657(identity) - - author-confidence:80.54385874095667 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:FjkzGzN2VDTyv94M9vD/EJC2qoU10090 rogid:iPmUawwUqiTHBiy+cMSC+4sor3810090 intact-crc:E0741D7A7A770D0C|rigid:u0jBC8jUQnYP/lH3sHhXdDh8K3Q false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62492 uniprotkb:Q62381 intact:EBI-770256|uniprotkb:P24410|uniprotkb:Q3V1Z6|uniprotkb:Q9JLX1|ensembl:ENSMUSP00000129163 intact:EBI-11567470|uniprotkb:Q3UTT9|uniprotkb:Q8BNP5 psi-mi:rb11a_mouse(display_long)|uniprotkb:Rab11a(gene name)|psi-mi:Rab11a(display_short)|uniprotkb:Rab11(gene name synonym) psi-mi:tll1_mouse(display_long)|uniprotkb:Tll(gene name synonym)|uniprotkb:Tll1(gene name)|psi-mi:Tll1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567972|imex:IM-24977-26 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_059078.2|ensembl:ENSMUSG00000004771(gene)|ensembl:ENSMUST00000172298(transcript)|go:"GO:0000922"(spindle pole)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005771"(multivesicular body)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005813"(centrosome)|go:"GO:0005828"(kinetochore microtubule)|go:"GO:0006887"(exocytosis)|go:"GO:0007080"(mitotic metaphase plate congression)|go:"GO:0008017"(microtubule binding)|go:"GO:0010634"(positive regulation of epithelial cell migration)|go:"GO:0010796"(regulation of multivesicular body size)|go:"GO:0010971"(positive regulation of G2/M transition of mitotic cell cycle)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030133"(transport vesicle)|go:"GO:0030424"(axon)|go:"GO:0030953"(astral microtubule organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032402"(melanosome transport)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034451"(centriolar satellite)|go:"GO:0036258"(multivesicular body assembly)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045773"(positive regulation of axon extension)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0051650"(establishment of vesicle localization)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060627"(regulation of vesicle-mediated transport)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072594"(establishment of protein localization to organelle)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0090307"(mitotic spindle assembly)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099003"(vesicle-mediated transport in synapse)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:1903078"(positive regulation of protein localization to plasma membrane)|go:"GO:1990182"(exosomal secretion)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62492|reactome:R-MMU-432040|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|go:"GO:0034394"(protein localization to cell surface)|entrezgene/locuslink:53869(identity) interpro:IPR000152(Aspartic acid and asparagine hydroxylation site)|interpro:IPR000742(EGF-like, type 3)|interpro:IPR000859(CUB)|interpro:IPR001506(Peptidase M12A, astacin)|interpro:IPR001881(EGF-like calcium-binding)|interpro:IPR006026(Peptidase, metallopeptidases)|interpro:IPR015446(Bone morphogenetic protein 1/tolloid-like protein)|interpro:IPR018097|interpro:IPR024079|reactome:R-MMU-1474228|reactome:R-MMU-1650814|reactome:R-MMU-2214320|go:"GO:0004222"(metalloendopeptidase activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005518"(collagen binding)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0005576"(extracellular region)|interpro:IPR034036|interpro:IPR035914|reactome:R-MMU-2243919|entrezgene/locuslink:21892(identity) - - author-confidence:4.572140537896787 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:FjkzGzN2VDTyv94M9vD/EJC2qoU10090 rogid:y0oF4VY7d6I8QsMtC6VSvITO9Qw10090 intact-crc:E0741D7A7A770D0C|rigid:u0jBC8jUQnYP/lH3sHhXdDh8K3Q false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61028 uniprotkb:Q9D952 intact:EBI-911674|ensembl:ENSMUSP00000041857|uniprotkb:Q3U1Z3 intact:EBI-8401534|uniprotkb:B1AU57|intact:MINT-4094751|ensembl:ENSMUSP00000037850 psi-mi:rab8b_mouse(display_long)|uniprotkb:Rab8b(gene name)|psi-mi:Rab8b(display_short) psi-mi:evpl_mouse(display_long)|uniprotkb:Evpl(gene name)|psi-mi:Evpl(display_short)|uniprotkb:210 kDa cornified envelope precursor protein(gene name synonym)|uniprotkb:p210(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567891|imex:IM-24977-24 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_775589.1|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098793"(presynapse)|go:"GO:0150115"(cell-substrate junction organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|ensembl:ENSMUSG00000036943(gene)|ensembl:ENSMUST00000041139(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016604"(nuclear body)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031346"(positive regulation of cell projection organization)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045046"(protein import into peroxisome membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051286"(cell tip)|go:"GO:0051461"(positive regulation of corticotropin secretion)|entrezgene/locuslink:235442(identity) refseq:NP_079552.3|ensembl:ENSMUSG00000034282(gene)|ensembl:ENSMUST00000037007(transcript)|go:"GO:0001533"(cornified envelope)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0018149"(peptide cross-linking)|go:"GO:0019215"(intermediate filament binding)|go:"GO:0030057"(desmosome)|go:"GO:0030216"(keratinocyte differentiation)|go:"GO:0031424"(keratinization)|go:"GO:0042060"(wound healing)|go:"GO:0045104"(intermediate filament cytoskeleton organization)|go:"GO:0045111"(intermediate filament cytoskeleton)|interpro:IPR001101(Plectin repeat)|interpro:IPR001452(Src homology-3)|interpro:IPR018159|interpro:IPR030460|interpro:IPR035915|interpro:IPR041615|interpro:IPR043197|mint:Q9D952|reactome:R-MMU-6809371|entrezgene/locuslink:14027(identity) - - comment:mint|function:Component of the cornified envelope of keratinocytes. May link the cornified envelope to desmosomes and intermediate filaments|author-confidence:3.566462401310916 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:bRfYongYDkw/3XyTJ8jMVUZ001E10090 rogid:l6svogrxyGkDPZCNtv9n2RdRtyg10090 intact-crc:5B6C79CBC40FF88F|rigid:2G2UpiDUf684KJl7z2zEGbpN6mc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61028 uniprotkb:Q6PHN9 intact:EBI-911674|ensembl:ENSMUSP00000041857|uniprotkb:Q3U1Z3 intact:EBI-1373353|ensembl:ENSMUSP00000031492 psi-mi:rab8b_mouse(display_long)|uniprotkb:Rab8b(gene name)|psi-mi:Rab8b(display_short) psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567891|imex:IM-24977-24 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_775589.1|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098793"(presynapse)|go:"GO:0150115"(cell-substrate junction organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|ensembl:ENSMUSG00000036943(gene)|ensembl:ENSMUST00000041139(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016604"(nuclear body)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031346"(positive regulation of cell projection organization)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045046"(protein import into peroxisome membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051286"(cell tip)|go:"GO:0051461"(positive regulation of corticotropin secretion)|entrezgene/locuslink:235442(identity) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) - - author-confidence:5.519091640947558 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:bRfYongYDkw/3XyTJ8jMVUZ001E10090 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 intact-crc:5B6C79CBC40FF88F|rigid:2G2UpiDUf684KJl7z2zEGbpN6mc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61028 uniprotkb:Q0KK56 intact:EBI-911674|ensembl:ENSMUSP00000041857|uniprotkb:Q3U1Z3 intact:EBI-11567883|uniprotkb:Q9JJG2|uniprotkb:Q76KB4|uniprotkb:Q0KK51|uniprotkb:Q7TNB6|ensembl:ENSMUSP00000016023 psi-mi:rab8b_mouse(display_long)|uniprotkb:Rab8b(gene name)|psi-mi:Rab8b(display_short) psi-mi:f184b_mouse(display_long)|uniprotkb:Kiaa1276(gene name synonym)|uniprotkb:MNCb-2622(orf name)|uniprotkb:Fam184b(gene name)|psi-mi:Fam184b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567891|imex:IM-24977-24 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_775589.1|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098793"(presynapse)|go:"GO:0150115"(cell-substrate junction organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|ensembl:ENSMUSG00000036943(gene)|ensembl:ENSMUST00000041139(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016604"(nuclear body)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031346"(positive regulation of cell projection organization)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045046"(protein import into peroxisome membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051286"(cell tip)|go:"GO:0051461"(positive regulation of corticotropin secretion)|entrezgene/locuslink:235442(identity) refseq:NP_067391.3|ensembl:ENSMUSG00000015879(gene)|ensembl:ENSMUST00000016023(transcript)|interpro:IPR029605|interpro:IPR029606|interpro:IPR039478|entrezgene/locuslink:58227(identity) - - author-confidence:4.3611516210624774 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:bRfYongYDkw/3XyTJ8jMVUZ001E10090 rogid:sljesehKm3/uzVFOEvJTdsDRBw810090 intact-crc:5B6C79CBC40FF88F|rigid:2G2UpiDUf684KJl7z2zEGbpN6mc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61028 uniprotkb:P55258 intact:EBI-911674|ensembl:ENSMUSP00000041857|uniprotkb:Q3U1Z3 intact:EBI-398411|uniprotkb:Q8VCF6|ensembl:ENSMUSP00000003121 psi-mi:rab8b_mouse(display_long)|uniprotkb:Rab8b(gene name)|psi-mi:Rab8b(display_short) psi-mi:rab8a_mouse(display_long)|uniprotkb:Rab8a(gene name)|psi-mi:Rab8a(display_short)|uniprotkb:Mel(gene name synonym)|uniprotkb:Rab8(gene name synonym)|uniprotkb:Oncogene c-mel(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567891|imex:IM-24977-24 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_775589.1|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098793"(presynapse)|go:"GO:0150115"(cell-substrate junction organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|ensembl:ENSMUSG00000036943(gene)|ensembl:ENSMUST00000041139(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016604"(nuclear body)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031346"(positive regulation of cell projection organization)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045046"(protein import into peroxisome membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051286"(cell tip)|go:"GO:0051461"(positive regulation of corticotropin secretion)|entrezgene/locuslink:235442(identity) refseq:NP_075615.2|dip:DIP-31053N|ensembl:ENSMUSG00000003037(gene)|ensembl:ENSMUST00000003121(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0014069"(postsynaptic density)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0045202"(synapse)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097546"(ciliary base)|go:"GO:0097730"(non-motile cilium)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098969"(neurotransmitter receptor transport to postsynaptic membrane)|go:"GO:0099003"(vesicle-mediated transport in synapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P55258|rcsb pdb:2FU5|reactome:R-MMU-2565942|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0098978"(glutamatergic synapse)|entrezgene/locuslink:17274(identity) - - author-confidence:1.067082694446279 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:bRfYongYDkw/3XyTJ8jMVUZ001E10090 rogid:SE+1h+U6C8cAN2UTBIDapsUt4zA10090 intact-crc:5B6C79CBC40FF88F|rigid:2G2UpiDUf684KJl7z2zEGbpN6mc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61294 uniprotkb:O54950 intact:EBI-529766|ensembl:ENSMUSP00000035155 intact:EBI-7927886|uniprotkb:Q5PRE8|intact:MINT-4583597|ensembl:ENSMUSP00000132499 psi-mi:rab6b_mouse(display_long)|uniprotkb:Rab6b(gene name)|psi-mi:Rab6b(display_short)|uniprotkb:D9Bwg0185e(gene name synonym) psi-mi:aakg1_mouse(display_long)|uniprotkb:Prkag1(gene name)|psi-mi:Prkag1(display_short)|uniprotkb:Prkaac(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567919|imex:IM-24977-25 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_776142.1|ensembl:ENSMUSG00000032549(gene)|ensembl:ENSMUST00000035155(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61294|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:270192(identity) refseq:NP_058061.2|go:"GO:0004679"(AMP-activated protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006633"(fatty acid biosynthetic process)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016208"(AMP binding)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031588"(nucleotide-activated protein kinase complex)|go:"GO:0032991"(protein-containing complex)|go:"GO:0043531"(ADP binding)|ensembl:ENSMUSG00000067713(gene)|ensembl:ENSMUST00000168846(transcript)|go:"GO:0042149"(cellular response to glucose starvation)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0004672"(protein kinase activity)|go:"GO:0071900"(regulation of protein serine/threonine kinase activity)|interpro:IPR000644(Cystathionine beta-synthase, core)|interpro:IPR039166|mint:O54950|reactome:R-MMU-1632852|reactome:R-MMU-380972|reactome:R-MMU-5628897|reactome:R-MMU-6804756|go:"GO:0050790"(regulation of catalytic activity)|go:"GO:0051170"(import into nucleus)|entrezgene/locuslink:19082(identity) - - comment:mint|function:AMPK is responsible for the regulation of fatty acid synthesis by phosphorylation of acetyl-CoA carboxylase. Also regulates cholesterol synthesis via phosphorylation and inactivation of hydroxymethylglutaryl-CoA reductase and hormone-sensitive lipase. This is a regulatory subunit|author-confidence:1.067082694446279 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/10/12 rogid:GmhjkLknjr8fxoUBxNx5ak5S/hQ10090 rogid:QbsRkFjF/c8PqK9DB5D637VeMzc10090 intact-crc:1BAF60B4F7C58175|rigid:UqPBrXsic9JseKh+UjDN/6NSiRo false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61294 uniprotkb:Q8C9J3 intact:EBI-529766|ensembl:ENSMUSP00000035155 intact:EBI-11567921|uniprotkb:A2RSG5|ensembl:ENSMUSP00000124222|uniprotkb:E0CYG3|uniprotkb:G0Z098 psi-mi:rab6b_mouse(display_long)|uniprotkb:Rab6b(gene name)|psi-mi:Rab6b(display_short)|uniprotkb:D9Bwg0185e(gene name synonym) psi-mi:spef2_mouse(display_long)|uniprotkb:Kpl2(gene name synonym)|uniprotkb:Protein KPL2(gene name synonym)|uniprotkb:Spef2(gene name)|psi-mi:Spef2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567919|imex:IM-24977-25 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_776142.1|ensembl:ENSMUSG00000032549(gene)|ensembl:ENSMUST00000035155(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61294|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:270192(identity) refseq:NP_001291973.1|refseq:NP_796097.2|refseq:NP_001291971.1|ensembl:ENSMUSG00000072663(gene)|ensembl:ENSMUST00000160236(transcript)|go:"GO:0002177"(manchette)|go:"GO:0003351"(epithelial cilium movement involved in extracellular fluid movement)|go:"GO:0005576"(extracellular region)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0007283"(spermatogenesis)|go:"GO:0007288"(sperm axoneme assembly)|go:"GO:0036126"(sperm flagellum)|go:"GO:0048705"(skeletal system morphogenesis)|go:"GO:0048854"(brain morphogenesis)|go:"GO:0060541"(respiratory system development)|go:"GO:0097225"(sperm midpiece)|interpro:IPR001715(Calponin-like actin-binding)|interpro:IPR010441(Protein of unknown function DUF1042)|interpro:IPR011992(EF-Hand type)|interpro:IPR027417|interpro:IPR036872|entrezgene/locuslink:320277(identity) - - author-confidence:3.0629093265312313 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/10/12 rogid:GmhjkLknjr8fxoUBxNx5ak5S/hQ10090 rogid:qgKdu/5rsbk5DThavn9vM1xnYAE10090 intact-crc:1BAF60B4F7C58175|rigid:UqPBrXsic9JseKh+UjDN/6NSiRo false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61294 uniprotkb:Q9D8V7 intact:EBI-529766|ensembl:ENSMUSP00000035155 intact:EBI-11567927|ensembl:ENSMUSP00000025394 psi-mi:rab6b_mouse(display_long)|uniprotkb:Rab6b(gene name)|psi-mi:Rab6b(display_short)|uniprotkb:D9Bwg0185e(gene name synonym) psi-mi:sc11c_mouse(display_long)|uniprotkb:Microsomal signal peptidase 21 kDa subunit(gene name synonym)|uniprotkb:SEC11 homolog C(gene name synonym)|uniprotkb:SEC11-like protein 3(gene name synonym)|uniprotkb:SPC21(gene name synonym)|uniprotkb:Sec11l3(gene name synonym)|uniprotkb:Spc21(gene name synonym)|uniprotkb:Sec11c(gene name)|psi-mi:Sec11c(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567919|imex:IM-24977-25 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_776142.1|ensembl:ENSMUSG00000032549(gene)|ensembl:ENSMUST00000035155(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61294|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:270192(identity) refseq:NP_079744.1|ensembl:ENSMUSG00000024516(gene)|ensembl:ENSMUST00000025394(transcript)|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005787"(signal peptidase complex)|go:"GO:0006465"(signal peptide processing)|go:"GO:0008233"(peptidase activity)|go:"GO:0016021"(integral component of membrane)|interpro:IPR001733(Peptidase S26B, eukaryotic signal peptidase)|interpro:IPR015927(Peptidase S24, S26A, S26B and S26C)|interpro:IPR019533|interpro:IPR019756|interpro:IPR019758|interpro:IPR036286|interpro:IPR037710|reactome:R-MMU-422085|entrezgene/locuslink:66286(identity) - - author-confidence:149.4774365025106 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/10/12 rogid:GmhjkLknjr8fxoUBxNx5ak5S/hQ10090 rogid:4vdJx835WaI5KSnr5eICxjl3aoA10090 intact-crc:1BAF60B4F7C58175|rigid:UqPBrXsic9JseKh+UjDN/6NSiRo false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61294 uniprotkb:Q9JI91 intact:EBI-529766|ensembl:ENSMUSP00000035155 intact:EBI-299169|ensembl:ENSMUSP00000067708|ensembl:ENSMUSP00000129609|uniprotkb:G3UW84 psi-mi:rab6b_mouse(display_long)|uniprotkb:Rab6b(gene name)|psi-mi:Rab6b(display_short)|uniprotkb:D9Bwg0185e(gene name synonym) psi-mi:actn2_mouse(display_long)|uniprotkb:Actn2(gene name)|psi-mi:Actn2(display_short)|uniprotkb:Alpha-actinin skeletal muscle isoform 2(gene name synonym)|uniprotkb:F-actin cross-linking protein(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567919|imex:IM-24977-25 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_776142.1|ensembl:ENSMUSG00000032549(gene)|ensembl:ENSMUST00000035155(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61294|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:270192(identity) ensembl:ENSMUSG00000052374(gene)|ensembl:ENSMUST00000064204(transcript)|ensembl:ENSMUST00000168193(transcript)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005865"(striated muscle thin filament)|go:"GO:0005925"(focal adhesion)|go:"GO:0006936"(muscle contraction)|go:"GO:0008092"(cytoskeletal protein binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030017"(sarcomere)|go:"GO:0030018"(Z disc)|go:"GO:0030035"(microspike assembly)|go:"GO:0030175"(filopodium)|go:"GO:0030274"(LIM domain binding)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0031432"(titin binding)|go:"GO:0042391"(regulation of membrane potential)|go:"GO:0042802"(identical protein binding)|go:"GO:0043267"(negative regulation of potassium ion transport)|go:"GO:0043268"(positive regulation of potassium ion transport)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045214"(sarcomere organization)|go:"GO:0048041"(focal adhesion assembly)|go:"GO:0051015"(actin filament binding)|go:"GO:0051373"(FATZ binding)|go:"GO:0051695"(actin filament uncapping)|go:"GO:0055013"(cardiac muscle cell development)|go:"GO:0070080"(titin Z domain binding)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0086097"(phospholipase C-activating angiotensin-activated signaling pathway)|go:"GO:0098839"(postsynaptic density membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099092"(postsynaptic density, intracellular component)|go:"GO:1901017"(negative regulation of potassium ion transmembrane transporter activity)|go:"GO:1901018"(positive regulation of potassium ion transmembrane transporter activity)|go:"GO:2000009"(negative regulation of protein localization to cell surface)|go:"GO:2001137"(positive regulation of endocytic recycling)|go:"GO:2001259"(positive regulation of cation channel activity)|interpro:IPR001589(Actinin-type, actin-binding, conserved site)|interpro:IPR001715(Calponin-like actin-binding)|interpro:IPR002017(Spectrin repeat)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR014837(EF-hand, Ca insensitive)|interpro:IPR018159|interpro:IPR036872|mint:Q9JI91|reactome:R-MMU-114608|reactome:R-MMU-390522|reactome:R-MMU-438066|reactome:R-MMU-5673001|refseq:NP_150371.4|entrezgene/locuslink:11472(identity) - - author-confidence:1.2782501129022756 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/10/12 rogid:GmhjkLknjr8fxoUBxNx5ak5S/hQ10090 rogid:r5g0YjP9pqmJjxEfxmBL7xMzjBI10090 intact-crc:1BAF60B4F7C58175|rigid:UqPBrXsic9JseKh+UjDN/6NSiRo false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61294 uniprotkb:P35279 intact:EBI-529766|ensembl:ENSMUSP00000035155 intact:EBI-444674|uniprotkb:Q542M6|uniprotkb:Q8R2Z7|uniprotkb:Q8VEE5|uniprotkb:Q9JJD4|ensembl:ENSMUSP00000032946 psi-mi:rab6b_mouse(display_long)|uniprotkb:Rab6b(gene name)|psi-mi:Rab6b(display_short)|uniprotkb:D9Bwg0185e(gene name synonym) psi-mi:rab6a_mouse(display_long)|uniprotkb:Rab6a(gene name)|psi-mi:Rab6a(display_short)|uniprotkb:Rab6(gene name synonym)|uniprotkb:MNCb-1660(orf name) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567919|imex:IM-24977-25 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_776142.1|ensembl:ENSMUSG00000032549(gene)|ensembl:ENSMUST00000035155(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61294|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:270192(identity) refseq:NP_001157135.1|refseq:NP_077249.1|ensembl:ENSMUSG00000030704(gene)|ensembl:ENSMUST00000032946(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0034498"(early endosome to Golgi transport)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0051117"(ATPase binding)|go:"GO:0070381"(endosome to plasma membrane transport vesicle)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P35279|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-120N|entrezgene/locuslink:19346(identity) - - author-confidence:1.4787074340570383 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/10/12 rogid:GmhjkLknjr8fxoUBxNx5ak5S/hQ10090 rogid:dvs8ZexwDDVZ3QFifBZ+id2D0+k10090 intact-crc:1BAF60B4F7C58175|rigid:UqPBrXsic9JseKh+UjDN/6NSiRo false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61294 uniprotkb:Q8BHC1 intact:EBI-529766|ensembl:ENSMUSP00000035155 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab6b_mouse(display_long)|uniprotkb:Rab6b(gene name)|psi-mi:Rab6b(display_short)|uniprotkb:D9Bwg0185e(gene name synonym) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567919|imex:IM-24977-25 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_776142.1|ensembl:ENSMUSG00000032549(gene)|ensembl:ENSMUST00000035155(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61294|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:270192(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - - author-confidence:1.0797563095860725 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/10/12 rogid:GmhjkLknjr8fxoUBxNx5ak5S/hQ10090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:1BAF60B4F7C58175|rigid:UqPBrXsic9JseKh+UjDN/6NSiRo false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P61294 uniprotkb:P62823 intact:EBI-529766|ensembl:ENSMUSP00000035155 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 psi-mi:rab6b_mouse(display_long)|uniprotkb:Rab6b(gene name)|psi-mi:Rab6b(display_short)|uniprotkb:D9Bwg0185e(gene name synonym) psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11567919|imex:IM-24977-25 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_776142.1|ensembl:ENSMUSG00000032549(gene)|ensembl:ENSMUST00000035155(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61294|reactome:R-MMU-6811436|reactome:R-MMU-6811440|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:270192(identity) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) - - author-confidence:1.096892465268047 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/10/12 rogid:GmhjkLknjr8fxoUBxNx5ak5S/hQ10090 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 intact-crc:1BAF60B4F7C58175|rigid:UqPBrXsic9JseKh+UjDN/6NSiRo false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:P11499 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-492813|uniprotkb:O89078|uniprotkb:Q3UIQ7|ensembl:ENSMUSP00000024739 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:hs90b_mouse(display_long)|uniprotkb:Heat shock 84 kDa(gene name synonym)|uniprotkb:Tumor-specific transplantation 84 kDa antigen(gene name synonym)|uniprotkb:Hsp90ab1(gene name)|psi-mi:Hsp90ab1(display_short)|uniprotkb:Hsp84(gene name synonym)|uniprotkb:Hsp84-1(gene name synonym)|uniprotkb:Hspcb(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_032328.2|go:"GO:0009651"(response to salt stress)|go:"GO:0009986"(cell surface)|go:"GO:0010033"(response to organic substance)|go:"GO:0016234"(inclusion body)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017098"(sulfonylurea receptor binding)|go:"GO:0019062"(virion attachment to host cell)|go:"GO:0019900"(kinase binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0021955"(central nervous system neuron axonogenesis)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030235"(nitric-oxide synthase regulator activity)|go:"GO:0030511"(positive regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031526"(brush border membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032092"(positive regulation of protein binding)|go:"GO:0032435"(negative regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0032516"(positive regulation of phosphoprotein phosphatase activity)|go:"GO:0032564"(dATP binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:1901799"(negative regulation of proteasomal protein catabolic process)|go:"GO:1903660"(negative regulation of complement-dependent cytotoxicity)|go:"GO:1903827"|go:"GO:1904031"(positive regulation of cyclin-dependent protein kinase activity)|go:"GO:1905323"(telomerase holoenzyme complex assembly)|go:"GO:1990226"(histone methyltransferase binding)|go:"GO:1990565"(HSP90-CDC37 chaperone complex)|go:"GO:1990913"(sperm head plasma membrane)|go:"GO:1990917"(ooplasm)|go:"GO:2000010"(positive regulation of protein localization to cell surface)|interpro:IPR001404(Heat shock protein Hsp90)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR019805|interpro:IPR020568|interpro:IPR020575|interpro:IPR036890|interpro:IPR037196|mint:P11499|reactome:R-MMU-168928|reactome:R-MMU-2029482|reactome:R-MMU-3371497|reactome:R-MMU-3371511|reactome:R-MMU-3371568|reactome:R-MMU-3371571|reactome:R-MMU-399954|reactome:R-MMU-6798695|reactome:R-MMU-844456|reactome:R-MMU-8852276|reactome:R-MMU-8937144|reactome:R-MMU-8939211|reactome:R-MMU-9013418|reactome:R-MMU-9018519|ensembl:ENSMUSG00000023944(gene)|ensembl:ENSMUST00000024739(transcript)|go:"GO:0001890"(placenta development)|go:"GO:0002134"(UTP binding)|go:"GO:0002135"(CTP binding)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0007004"(telomere maintenance via telomerase)|go:"GO:0008180"(COP9 signalosome)|go:"GO:0034605"(cellular response to heat)|go:"GO:0034751"(aryl hydrocarbon receptor complex)|go:"GO:0042220"(response to cocaine)|go:"GO:0042277"(peptide binding)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0042470"(melanosome)|go:"GO:0042493"|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0043008"(ATP-dependent protein binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0044294"(dendritic growth cone)|go:"GO:0044295"(axonal growth cone)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045597"(positive regulation of cell differentiation)|go:"GO:0045793"(positive regulation of cell size)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0048156"(tau protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048675"(axon extension)|go:"GO:0050821"(protein stabilization)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051248"(negative regulation of protein metabolic process)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:0060334"(regulation of interferon-gamma-mediated signaling pathway)|go:"GO:0060338"(regulation of type I interferon-mediated signaling pathway)|go:"GO:0070182"(DNA polymerase binding)|go:"GO:0071353"(cellular response to interleukin-4)|go:"GO:0071407"(cellular response to organic cyclic compound)|go:"GO:0071902"(positive regulation of protein serine/threonine kinase activity)|go:"GO:0097435"(supramolecular fiber organization)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0120293"(dynein axonemal particle)|go:"GO:1901389"(negative regulation of transforming growth factor beta activation)|dip:DIP-461N|entrezgene/locuslink:15516(identity) - - author-confidence:1.1081380674343426 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:5/MXDESVXdwuWna0s87Ap19aLMA10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q9D1G1 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) - - comment:mint|function:Protein transport. Probably involved in vesicular traffic|author-confidence:15.405403958094958 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q8K4J6 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-8291665|intact:UNK-5521183|uniprotkb:Q642U1|ensembl:ENSMUSP00000105207 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:mrtfa_mouse(display_long)|uniprotkb:Mrtfa(gene name)|psi-mi:Mrtfa(display_short)|uniprotkb:Basic SAP coiled-coil transcription activator(gene name synonym)|uniprotkb:Bsac(gene name synonym)|uniprotkb:MKL/myocardin-like protein 1(gene name synonym)|uniprotkb:Mal(gene name synonym)|uniprotkb:Megakaryoblastic leukemia 1 protein homolog(gene name synonym)|uniprotkb:Megakaryocytic acute leukemia protein homolog(gene name synonym)|uniprotkb:Mkl1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_001076005.1|refseq:NP_694629.2|dip:DIP-60884N|ensembl:ENSMUSG00000042292(gene)|ensembl:ENSMUST00000109579(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001764"(neuron migration)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003779"(actin binding)|go:"GO:0003785"(actin monomer binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0010735"(positive regulation of transcription via serum response element binding)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030900"(forebrain development)|go:"GO:0031175"(neuron projection development)|go:"GO:0043154"(negative regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0043522"(leucine zipper domain binding)|go:"GO:0044319"(wound healing, spreading of cells)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051145"(smooth muscle cell differentiation)|go:"GO:2001234"(negative regulation of apoptotic signaling pathway)|interpro:IPR003034(DNA-binding SAP)|interpro:IPR004018(RPEL repeat)|interpro:IPR029992|interpro:IPR036361|interpro:IPR043451|mint:Q8K4J6|rcsb pdb:2V51|rcsb pdb:2V52|rcsb pdb:2YJE|rcsb pdb:2YJF|reactome:R-MMU-3899300|reactome:R-MMU-5663220|go:"GO:0005829"(cytosol)|entrezgene/locuslink:223701(identity) - - comment:mint|function:"Transcriptional factor which uses the canonical single or multiple CArG boxes DNA sequence. Acts as a cofactor of serum response factor (SRF) with the potential to modulate SRF target genes. Suppresses TNF-induced cell death by inhibiting activation of caspases; its transcriptional activity is indispensable for the antiapoptotic function. It may up-regulate antiapoptotic molecules, which in turn inhibit caspase activation"|author-confidence:1.4606787702666277 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:JllEBRX54Z25+MAvSfRzjCaaQ5810090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q9D554 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-8338145|intact:MINT-1853954|ensembl:ENSMUSP00000030734 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:sf3a3_mouse(display_long)|uniprotkb:Sf3a3(gene name)|psi-mi:Sf3a3(display_short)|uniprotkb:Sap61(gene name synonym)|uniprotkb:Spliceosome-associated protein 61(gene name synonym)|uniprotkb:SF3a60(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_083433.1|ensembl:ENSMUSG00000028902(gene)|ensembl:ENSMUST00000030734(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005686"(U2 snRNP)|go:"GO:0006397"(mRNA processing)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016607"(nuclear speck)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1903241"(U2-type prespliceosome assembly)|interpro:IPR000690(Zinc finger, C2H2-type matrin)|interpro:IPR021966|interpro:IPR024598|interpro:IPR031774|interpro:IPR031776|mint:Q9D554|reactome:R-MMU-72163|entrezgene/locuslink:75062(identity) - - function:"Subunit of the splicing factor SF3A required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex"|comment:mint|author-confidence:5.690810201010676 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:1uFDDd2qMaHNBnQBzY/Go+IVACc10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q9Z110 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-8440240|intact:MINT-1853829|uniprotkb:Q8BGM2|uniprotkb:Q9R1P6|ensembl:ENSMUSP00000025979 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:p5cs_mouse(display_long)|uniprotkb:Aldh18a1(gene name)|psi-mi:Aldh18a1(display_short)|uniprotkb:P5cs(gene name synonym)|uniprotkb:Pycs(gene name synonym)|uniprotkb:Aldehyde dehydrogenase family 18 member A1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_705782.2|refseq:NP_062672.2|ensembl:ENSMUSG00000025007(gene)|ensembl:ENSMUST00000025979(transcript)|go:"GO:0004349"(glutamate 5-kinase activity)|go:"GO:0004350"(glutamate-5-semialdehyde dehydrogenase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0006536"(glutamate metabolic process)|go:"GO:0006561"(proline biosynthetic process)|go:"GO:0006592"(ornithine biosynthetic process)|go:"GO:0008652"(cellular amino acid biosynthetic process)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0019240"(citrulline biosynthetic process)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0055129"(L-proline biosynthetic process)|interpro:IPR000965(Gamma-glutamyl phosphate reductase GPR)|interpro:IPR001048(Aspartate/glutamate/uridylate kinase)|interpro:IPR001057(Glutamate 5-kinase)|interpro:IPR005715(Glutamate 5-kinase, ProB-related)|interpro:IPR005766(delta l-pyrroline-5-carboxylate synthetase)|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR019797|interpro:IPR020593|interpro:IPR036393|interpro:IPR041744|mint:Q9Z110|reactome:R-MMU-8964539|entrezgene/locuslink:56454(identity) - - comment:mint|author-confidence:1.1877497907068486 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:bzLtsuFfMe3vEyBVOmcAcLYvbVs10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q9R0X4 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-7447997|uniprotkb:Q9WUZ8|uniprotkb:Q9WTJ0|intact:MINT-4086590|uniprotkb:Q545G7|ensembl:ENSMUSP00000026324 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:acot9_mouse(display_long)|uniprotkb:Acot9(gene name)|psi-mi:Acot9(display_short)|uniprotkb:Acate2(gene name synonym)|uniprotkb:Protein U8(gene name synonym)|uniprotkb:Acyl-CoA thioester hydrolase 9(gene name synonym)|uniprotkb:Acyl coenzyme A thioester hydrolase 2(gene name synonym)|uniprotkb:Mitochondrial 48 kDa acyl-CoA thioester hydrolase 1(gene name synonym)|uniprotkb:p48(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_062710.2|ensembl:ENSMUSG00000025287(gene)|ensembl:ENSMUST00000026324(transcript)|go:"GO:0003986"(acetyl-CoA hydrolase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006637"(acyl-CoA metabolic process)|go:"GO:0047617"(acyl-CoA hydrolase activity)|go:"GO:0052689"(carboxylic ester hydrolase activity)|interpro:IPR029069|interpro:IPR033120|mint:Q9R0X4|reactome:R-MMU-77289|entrezgene/locuslink:56360(identity) - - comment:mint|function:"Acyl-CoA thioesterases are a group of enzymes that catalyze the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Active on long chain acyl-CoAs"|author-confidence:72.1276857800253 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:m4eJt96uVK8Ttx1ldZV62LI1LFU10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:P57784 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-6877081|ensembl:ENSMUSP00000117947|uniprotkb:Q3U7R8|uniprotkb:Q8K2W4|uniprotkb:Q91YW1|uniprotkb:Q9JKQ3 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:ru2a_mouse(display_long)|uniprotkb:Snrpa1(gene name)|psi-mi:Snrpa1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) ensembl:ENSMUSG00000030512(gene)|ensembl:ENSMUST00000153609(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005686"(U2 snRNP)|go:"GO:0007283"(spermatogenesis)|go:"GO:0016604"(nuclear body)|go:"GO:0016607"(nuclear speck)|go:"GO:0030620"(U2 snRNA binding)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR003603(U2A'/phosphoprotein 32 family A, C-terminal)|interpro:IPR032675|interpro:IPR044640|mint:P57784|reactome:R-MMU-72163|refseq:NP_067311.4|entrezgene/locuslink:68981(identity) - - author-confidence:1.3855295875363027 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:AMQnbw028+3/guP4MfrfDJCFu6s10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q9JKM7 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-444699|uniprotkb:Q8C7E1 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:rab37_mouse(display_long)|uniprotkb:Rab37(gene name)|psi-mi:Rab37(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_067386.3|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0015031"(protein transport)|go:"GO:0030141"(secretory granule)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-8873719|entrezgene/locuslink:58222(identity) - - author-confidence:1.1424103787982913 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:e0z4I79OQSZSGejZss4AbqTnswg10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q6ZQ08 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-682479|intact:EBI-2104684|uniprotkb:B2RY28|uniprotkb:Q3UPB7|uniprotkb:Q8BSB4|uniprotkb:Q8BXB2|uniprotkb:Q8C0H2|uniprotkb:Q8K3D8 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:cnot1_mouse(display_long)|uniprotkb:Cnot1(gene name)|psi-mi:Cnot1(display_short)|uniprotkb:Kiaa1007(gene name synonym)|uniprotkb:CCR4-associated factor 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_835179.1|refseq:XP_006530937.1|dip:DIP-46845N|mint:Q6ZQ08|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000288"(nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:0000932"(P-body)|go:"GO:0001829"(trophectodermal cell differentiation)|go:"GO:0004535"("poly(A)-specific ribonuclease activity")|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0010606"(positive regulation of cytoplasmic mRNA processing body assembly)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0030331"(estrogen receptor binding)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0035195"(gene silencing by miRNA)|go:"GO:0042974"(retinoic acid receptor binding)|go:"GO:0048387"(negative regulation of retinoic acid receptor signaling pathway)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0060213"("positive regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0061014"(positive regulation of mRNA catabolic process)|go:"GO:0070016"(armadillo repeat domain binding)|go:"GO:1900153"(positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:2000036"(regulation of stem cell population maintenance)|interpro:IPR007196(CCR4-Not complex component, Not1)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR024557|interpro:IPR032191|interpro:IPR032193|interpro:IPR032194|interpro:IPR038535|interpro:IPR040398|reactome:R-MMU-429947|reactome:R-MMU-6804115|entrezgene/locuslink:234594(identity) - - comment:AfCS Y2H protein 39306. Translated from nucleotide sequence.|author-confidence:1.8401732179736854 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:2Q4quoSuPlUbD4QkiAkc9Hr9avI10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:P35283 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-772065|uniprotkb:Q0PD43|uniprotkb:Q9CUW7|ensembl:ENSMUSP00000128645 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:rab12_mouse(display_long)|uniprotkb:Rab-13(gene name synonym)|uniprotkb:Rab12(gene name)|psi-mi:Rab12(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_077768.2|ensembl:ENSMUSG00000023460(gene)|ensembl:ENSMUST00000167962(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005768"(endosome)|go:"GO:0005776"(autophagosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008333"(endosome to lysosome transport)|go:"GO:0009306"(protein secretion)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030141"(secretory granule)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0044257"(cellular protein catabolic process)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0071346"(cellular response to interferon-gamma)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041830|mint:P35283|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19328(identity) - - author-confidence:3.2371269092979706 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:/ExkwhEpAR43tYQbj32hm6maFwU10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q9DBG6 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-529941|uniprotkb:Q3TKY0|uniprotkb:Q91XH0|uniprotkb:A2ACG6|ensembl:ENSMUSP00000112081 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:rpn2_mouse(display_long)|uniprotkb:Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDa subunit(gene name synonym)|uniprotkb:Ribophorin-2(gene name synonym)|uniprotkb:Ribophorin II(gene name synonym)|uniprotkb:Rpn2(gene name)|psi-mi:Rpn2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_062616.2|ensembl:ENSMUSG00000027642(gene)|ensembl:ENSMUST00000116380(transcript)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005791"(rough endoplasmic reticulum)|go:"GO:0006487"(protein N-linked glycosylation)|go:"GO:0007568"(aging)|go:"GO:0008250"(oligosaccharyltransferase complex)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016604"(nuclear body)|go:"GO:0042493"|go:"GO:0043022"(ribosome binding)|interpro:IPR008814(Ribophorin II)|mint:Q9DBG6|rcsb pdb:5J6G|rcsb pdb:5J6H|entrezgene/locuslink:20014(identity) - - author-confidence:1.6623856027732011 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:FeAH2GGWVY8J5dSaAvfrsBSx3co10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q8BT14 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-11568001|uniprotkb:Q9Z1D0|uniprotkb:Q8CCR4|uniprotkb:Q9CV74|ensembl:ENSMUSP00000044137 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:cnot4_mouse(display_long)|uniprotkb:CCR4-associated factor 4(gene name synonym)|uniprotkb:E3 ubiquitin-protein ligase CNOT4(gene name synonym)|uniprotkb:Not4(gene name synonym)|uniprotkb:Potential transcriptional repressor NOT4Hp(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase CNOT4(gene name synonym)|uniprotkb:Cnot4(gene name)|psi-mi:Cnot4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_001157883.1|refseq:NP_001157885.1|refseq:NP_058573.3|refseq:XP_011239709.1|refseq:XP_011239710.1|ensembl:ENSMUSG00000038784(gene)|ensembl:ENSMUST00000044163(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0045652"(regulation of megakaryocyte differentiation)|go:"GO:0046872"(metal ion binding)|go:"GO:0051865"(protein autoubiquitination)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR034261|interpro:IPR035979|interpro:IPR039515|interpro:IPR039780|rcsb pdb:2CPI|reactome:R-MMU-429947|reactome:R-MMU-6804115|entrezgene/locuslink:53621(identity) - - author-confidence:1.7184351119829921 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:UoBMptSCToNiGE27sDEzVZFR3ss10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:P47738 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-2308120|ensembl:ENSMUSP00000031411 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:aldh2_mouse(display_long)|uniprotkb:Aldh2(gene name)|psi-mi:Aldh2(display_short)|uniprotkb:Ahd-1(gene name synonym)|uniprotkb:Ahd1(gene name synonym)|uniprotkb:ALDH class 2(gene name synonym)|uniprotkb:AHD-M1(gene name synonym)|uniprotkb:ALDHI(gene name synonym)|uniprotkb:ALDH-E2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_033786.1|ensembl:ENSMUSG00000029455(gene)|ensembl:ENSMUST00000031411(transcript)|go:"GO:0004029"("aldehyde dehydrogenase (NAD+) activity")|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006068"(ethanol catabolic process)|go:"GO:0006117"(acetaldehyde metabolic process)|go:"GO:0008631"(intrinsic apoptotic signaling pathway in response to oxidative stress)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043878"("glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity")|go:"GO:0048149"(behavioral response to ethanol)|go:"GO:0050727"(regulation of inflammatory response)|go:"GO:0051287"(NAD binding)|go:"GO:0070404"(NADH binding)|go:"GO:0110095"(cellular detoxification of aldehyde)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016160(Aldehyde dehydrogenase, conserved site)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR029510|mint:P47738|reactome:R-MMU-380612|reactome:R-MMU-71384|entrezgene/locuslink:11669(identity) - - author-confidence:1.1218826923042595 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:C4L2qigIlQeaZH4RsNocJovkPMw10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:P20108 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-309031|ensembl:ENSMUSP00000025961 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:prdx3_mouse(display_long)|uniprotkb:Prdx3(gene name)|psi-mi:Prdx3(display_short)|uniprotkb:Aop1(gene name synonym)|uniprotkb:Mer5(gene name synonym)|uniprotkb:Perioredoxin-3(gene name synonym)|uniprotkb:PRX III(gene name synonym)|uniprotkb:Antioxidant protein 1(gene name synonym)|uniprotkb:Protein MER5(gene name synonym)|uniprotkb:Thioredoxin-dependent peroxiredoxin 3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) ensembl:ENSMUSG00000024997(gene)|ensembl:ENSMUST00000025961(transcript)|go:"GO:0001893"(maternal placenta development)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008379"(thioredoxin peroxidase activity)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0018171"(peptidyl-cysteine oxidation)|go:"GO:0043209"(myelin sheath)|go:"GO:0019900"(kinase binding)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0051881"(regulation of mitochondrial membrane potential)|interpro:IPR000866(Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen)|interpro:IPR013766(Thioredoxin domain)|interpro:IPR019479|interpro:IPR036249|mint:P20108|reactome:R-MMU-3299685|go:"GO:0019901"(protein kinase binding)|go:"GO:0030099"(myeloid cell differentiation)|go:"GO:0032496"(response to lipopolysaccharide)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033673"(negative regulation of kinase activity)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0034614"(cellular response to reactive oxygen species)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0042744"(hydrogen peroxide catabolic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0043027"(cysteine-type endopeptidase inhibitor activity involved in apoptotic process)|refseq:NP_031478.1|entrezgene/locuslink:11757(identity) - - author-confidence:1.8046513952579257 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:BGMQPun3/Vu7SSlj8rdWV+PU48Q10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:P97313 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-2272005|uniprotkb:E9QN15|uniprotkb:O88187|uniprotkb:P97928|uniprotkb:Q307W9|uniprotkb:Q3V2W8|uniprotkb:Q8C2A7|uniprotkb:Q9Z341|ensembl:ENSMUSP00000023352 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:prkdc_mouse(display_long)|uniprotkb:Prkdc(gene name)|psi-mi:Prkdc(display_short)|uniprotkb:Xrcc7(gene name synonym)|uniprotkb:p460(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_035289.2|ensembl:ENSMUSG00000022672(gene)|ensembl:ENSMUST00000023352(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000723"(telomere maintenance)|go:"GO:0001756"(somitogenesis)|go:"GO:0001933"(negative regulation of protein phosphorylation)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0002326"(B cell lineage commitment)|go:"GO:0002328"(pro-B cell differentiation)|go:"GO:0002360"(T cell lineage commitment)|go:"GO:0002638"(negative regulation of immunoglobulin production)|go:"GO:0002684"(positive regulation of immune system process)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004677"(DNA-dependent protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005958"(DNA-dependent protein kinase-DNA ligase 4 complex)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007420"(brain development)|go:"GO:0007507"(heart development)|go:"GO:0008630"(intrinsic apoptotic signaling pathway in response to DNA damage)|go:"GO:0010212"(response to ionizing radiation)|go:"GO:0010332"(response to gamma radiation)|go:"GO:0014823"(response to activity)|go:"GO:0016233"(telomere capping)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019899"(enzyme binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030098"(lymphocyte differentiation)|go:"GO:0031571"(mitotic G1 DNA damage checkpoint signaling)|go:"GO:0031648"(protein destabilization)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032991"(protein-containing complex)|go:"GO:0032993"(protein-DNA complex)|go:"GO:0033077"(T cell differentiation in thymus)|go:"GO:0033151"("V(D)J recombination")|go:"GO:0033152"("immunoglobulin V(D)J recombination")|go:"GO:0033153"("T cell receptor V(D)J recombination")|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0035234"(ectopic germ cell programmed cell death)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0045087"(innate immune response)|go:"GO:0045621"(positive regulation of lymphocyte differentiation)|go:"GO:0045648"(positive regulation of erythrocyte differentiation)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048146"(positive regulation of fibroblast proliferation)|go:"GO:0048511"(rhythmic process)|go:"GO:0048536"(spleen development)|go:"GO:0048538"(thymus development)|go:"GO:0048639"(positive regulation of developmental growth)|go:"GO:0048660"(regulation of smooth muscle cell proliferation)|go:"GO:0050678"(regulation of epithelial cell proliferation)|go:"GO:0070419"(nonhomologous end joining complex)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1902036"(regulation of hematopoietic stem cell differentiation)|go:"GO:1905221"(positive regulation of platelet formation)|go:"GO:2000773"(negative regulation of cellular senescence)|go:"GO:2001034"(positive regulation of double-strand break repair via nonhomologous end joining)|go:"GO:2001229"(negative regulation of response to gamma radiation)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR003151(PIK-related kinase, FAT)|interpro:IPR003152(PIK-related kinase, FATC)|interpro:IPR011009(Protein kinase-like)|interpro:IPR012582(NUC194)|interpro:IPR014009(PIK-related kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR036940|interpro:IPR037706|mint:P97313|reactome:R-MMU-5693571|reactome:R-MMU-8866654|entrezgene/locuslink:19090(identity) - - author-confidence:14.511467836685297 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:CE0UDetYkRmQdIxj+xDjU3hYpzo10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q6PHN9 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-1373353|ensembl:ENSMUSP00000031492 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) - - author-confidence:13.816561023456897 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q60865 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-647767|uniprotkb:Q6IMN3|uniprotkb:Q7TT26|uniprotkb:Q60758|uniprotkb:Q61620|ensembl:ENSMUSP00000028607|ensembl:ENSMUSP00000106777 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:capr1_mouse(display_long)|uniprotkb:Cytoplasmic activation- and proliferation-associated protein 1(gene name synonym)|uniprotkb:GPI-anchored membrane protein 1(gene name synonym)|uniprotkb:GPI-anchored protein p137(gene name synonym)|uniprotkb:Membrane component chromosome 11 surface marker 1(gene name synonym)|uniprotkb:Caprin1(gene name)|psi-mi:Caprin1(display_short)|uniprotkb:Gpiap(gene name synonym)|uniprotkb:Gpiap1(gene name synonym)|uniprotkb:Gpip137(gene name synonym)|uniprotkb:M11s1(gene name synonym)|uniprotkb:G5E5(orf name)|uniprotkb:Rng105(gene name synonym)|uniprotkb:RNA granule protein 105(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_001104759.1|refseq:NP_001104760.1|refseq:NP_001104761.1|refseq:NP_001104762.1|refseq:NP_058019.2|ensembl:ENSMUSG00000027184(gene)|ensembl:ENSMUST00000028607(transcript)|ensembl:ENSMUST00000111147(transcript)|go:"GO:0000932"(P-body)|go:"GO:0003723"(RNA binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030027"(lamellipodium)|go:"GO:0030425"(dendrite)|go:"GO:0031252"(cell leading edge)|go:"GO:0045202"(synapse)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0061003"(positive regulation of dendritic spine morphogenesis)|go:"GO:0098794"(postsynapse)|go:"GO:0098978"(glutamatergic synapse)|interpro:IPR022070|interpro:IPR028816|interpro:IPR041637|mint:Q60865|entrezgene/locuslink:53872(identity) - - author-confidence:7.421918928133462 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:e+Dcb+82jx+CoLhlGBbdSG62dPU10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:O54734 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-773157|uniprotkb:Q8C4P7|ensembl:ENSMUSP00000030538 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:ost48_mouse(display_long)|uniprotkb:Ddost(gene name)|psi-mi:Ddost(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_031864.2|ensembl:ENSMUSG00000028757(gene)|ensembl:ENSMUST00000030538(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006487"(protein N-linked glycosylation)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0008250"(oligosaccharyltransferase complex)|go:"GO:0016021"(integral component of membrane)|go:"GO:0018279"(protein N-linked glycosylation via asparagine)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0034097"(response to cytokine)|go:"GO:0042110"(T cell activation)|go:"GO:0043231"(intracellular membrane-bounded organelle)|interpro:IPR005013(Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit)|mint:O54734|reactome:R-MMU-6798695|entrezgene/locuslink:13200(identity) - - author-confidence:4.6389001444078115 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:tXotz8rJCykp2nspz37gYrmrBGo10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q8R081 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-647483|uniprotkb:O54789|uniprotkb:Q8K0S7|uniprotkb:Q499X2|ensembl:ENSMUSP00000049407|ensembl:ENSMUSP00000133728 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:hnrpl_mouse(display_long)|uniprotkb:Hnrpl(gene name synonym)|uniprotkb:Hnrnpl(gene name)|psi-mi:Hnrnpl(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_796275.3|refseq:XP_006539621.1|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034816|interpro:IPR034817|interpro:IPR035005|interpro:IPR035008|interpro:IPR035979|mint:Q8R081|rcsb pdb:3S01|rcsb pdb:3TYT|reactome:R-MMU-72163|reactome:R-MMU-72203|go:"GO:1990715"(mRNA CDS binding)|ensembl:ENSMUSG00000015165(gene)|ensembl:ENSMUST00000038572(transcript)|ensembl:ENSMUST00000174548(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035770"(ribonucleoprotein granule)|go:"GO:0043484"(regulation of RNA splicing)|go:"GO:0045120"(pronucleus)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0048025"(negative regulation of mRNA splicing, via spliceosome)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0097157"(pre-mRNA intronic binding)|go:"GO:1902416"(positive regulation of mRNA binding)|entrezgene/locuslink:15388(identity) - - author-confidence:1.1038540285138492 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:BApt4fekoyJ285Ve13kxstcLbV010090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q8BHC1 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - - author-confidence:1.4005237237580301 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:O88342 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-6914976|ensembl:ENSMUSP00000005234 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:wdr1_mouse(display_long)|uniprotkb:Wdr1(gene name)|psi-mi:Wdr1(display_short)|uniprotkb:Actin-interacting protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) go:"GO:0045199"(maintenance of epithelial cell apical/basal polarity)|go:"GO:0045214"(sarcomere organization)|go:"GO:0048713"(regulation of oligodendrocyte differentiation)|go:"GO:0051015"(actin filament binding)|go:"GO:0060307"(regulation of ventricular cardiac muscle cell membrane repolarization)|go:"GO:1990266"(neutrophil migration)|interpro:IPR001680(WD40 repeat)|interpro:IPR011045(Nitrous oxide reductase, N-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|reactome:R-MMU-114608|ensembl:ENSMUSG00000005103(gene)|ensembl:ENSMUST00000005234(transcript)|go:"GO:0002102"(podosome)|go:"GO:0002446"(neutrophil mediated immunity)|go:"GO:0003779"(actin binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030042"(actin filament depolymerization)|go:"GO:0030043"(actin filament fragmentation)|go:"GO:0030054"(cell junction)|go:"GO:0030220"(platelet formation)|go:"GO:0030834"(regulation of actin filament depolymerization)|go:"GO:0030836"(positive regulation of actin filament depolymerization)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0030865"(cortical cytoskeleton organization)|go:"GO:0040011"(locomotion)|go:"GO:0042247"(establishment of planar polarity of follicular epithelium)|go:"GO:0042995"(cell projection)|go:"GO:0043209"(myelin sheath)|go:"GO:0043297"(apical junction assembly)|refseq:NP_035845.1|entrezgene/locuslink:22388(identity) - - author-confidence:1.3246605345409561 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:PVIlQDv8eXQrI3QBWJOjKlj/Zig10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q9JKY0 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-529858|ensembl:ENSMUSP00000084466 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:cnot9_mouse(display_long)|uniprotkb:Cnot9(gene name)|psi-mi:Cnot9(display_short)|uniprotkb:Cell differentiation protein RQCD1 homolog(gene name synonym)|uniprotkb:EPO-induced protein FL10(gene name synonym)|uniprotkb:Rcd1(gene name synonym)|uniprotkb:Rqcd1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_067358.1|dip:DIP-34266N|ensembl:ENSMUSG00000026174(gene)|ensembl:ENSMUST00000087215(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005154"(epidermal growth factor receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019221"(cytokine-mediated signaling pathway)|go:"GO:0019900"(kinase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0031047"(gene silencing by RNA)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0045742"(positive regulation of epidermal growth factor receptor signaling pathway)|interpro:IPR007216(Cell differentiation, Rcd1-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|reactome:R-MMU-429947|reactome:R-MMU-6804115|entrezgene/locuslink:58184(identity) - - author-confidence:2.386209678714931 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:dFdbI7Ohvu0vtwY45V/pyKNTT/810090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q8QZY9 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-6094674|ensembl:ENSMUSP00000075709 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:sf3b4_mouse(display_long)|uniprotkb:Sf3b4(gene name)|psi-mi:Sf3b4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_694693.1|ensembl:ENSMUSG00000068856(gene)|ensembl:ENSMUST00000076372(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0048026"(positive regulation of mRNA splicing, via spliceosome)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:1990935"(splicing factor binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034158|interpro:IPR034159|interpro:IPR035979|mint:Q8QZY9|reactome:R-MMU-72163|reactome:R-MMU-72165|entrezgene/locuslink:107701(identity) - - author-confidence:4.023962057695294 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:eYaqZLWduL1MsiM0jP2BLXuEkBw10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:P07901 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-78930|ensembl:ENSMUSP00000021698|ensembl:ENSMUSP00000091921 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:hs90a_mouse(display_long)|uniprotkb:Hsp90aa1(gene name)|psi-mi:Hsp90aa1(display_short)|uniprotkb:Hsp86(gene name synonym)|uniprotkb:Hsp86-1(gene name synonym)|uniprotkb:Hspca(gene name synonym)|uniprotkb:Heat shock 86 kDa(gene name synonym)|uniprotkb:Tumor-specific transplantation 86 kDa antigen(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_034610.1|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045585"(positive regulation of cytotoxic T cell differentiation)|go:"GO:0045793"(positive regulation of cell size)|go:"GO:0046677"(response to antibiotic)|go:"GO:0048156"(tau protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048675"(axon extension)|go:"GO:0050821"(protein stabilization)|go:"GO:0051020"(GTPase binding)|go:"GO:0051022"(Rho GDP-dissociation inhibitor binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070182"(DNA polymerase binding)|go:"GO:0097110"(scaffold protein binding)|go:"GO:0097226"(sperm mitochondrial sheath)|go:"GO:0097524"(sperm plasma membrane)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0098586"(cellular response to virus)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902949"(positive regulation of tau-protein kinase activity)|go:"GO:1903364"(positive regulation of cellular protein catabolic process)|go:"GO:1903827"|go:"GO:1905323"(telomerase holoenzyme complex assembly)|go:"GO:1990782"(protein tyrosine kinase binding)|interpro:IPR001404(Heat shock protein Hsp90)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR019805|interpro:IPR020568|interpro:IPR020575|interpro:IPR036890|interpro:IPR037196|mint:P07901|rcsb pdb:5H22|reactome:R-MMU-1227986|reactome:R-MMU-1474151|reactome:R-MMU-168928|reactome:R-MMU-2029482|reactome:R-MMU-203615|reactome:R-MMU-2565942|reactome:R-MMU-3371497|reactome:R-MMU-3371511|reactome:R-MMU-3371568|reactome:R-MMU-3371571|reactome:R-MMU-380259|reactome:R-MMU-380270|reactome:R-MMU-380284|reactome:R-MMU-380320|reactome:R-MMU-399954|reactome:R-MMU-4420097|reactome:R-MMU-5218920|reactome:R-MMU-5620912|reactome:R-MMU-5675482|reactome:R-MMU-6798695|reactome:R-MMU-8852276|reactome:R-MMU-8854518|reactome:R-MMU-8863795|reactome:R-MMU-8939211|reactome:R-MMU-9009391|reactome:R-MMU-9013418|reactome:R-MMU-9018519|reactome:R-MMU-9652282|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031526"(brush border membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032273"(positive regulation of protein polymerization)|go:"GO:0032564"(dATP binding)|go:"GO:0032728"(positive regulation of interferon-beta production)|ensembl:ENSMUSG00000021270(gene)|ensembl:ENSMUST00000021698(transcript)|ensembl:ENSMUST00000094361(transcript)|go:"GO:0001764"(neuron migration)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0002134"(UTP binding)|go:"GO:0002135"(CTP binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0002230"(positive regulation of defense response to virus by host)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006809"(nitric oxide biosynthetic process)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0007004"(telomere maintenance via telomerase)|go:"GO:0009408"(response to heat)|go:"GO:0009409"(response to cold)|go:"GO:0009986"(cell surface)|go:"GO:0010592"(positive regulation of lamellipodium assembly)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017098"(sulfonylurea receptor binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0021955"(central nervous system neuron axonogenesis)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030235"(nitric-oxide synthase regulator activity)|go:"GO:0030911"(TPR domain binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034605"(cellular response to heat)|go:"GO:0036126"(sperm flagellum)|go:"GO:0042026"(protein refolding)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0042470"(melanosome)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043209"(myelin sheath)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0044294"(dendritic growth cone)|go:"GO:0044295"(axonal growth cone)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045040"(protein insertion into mitochondrial outer membrane)|dip:DIP-30975N|entrezgene/locuslink:15519(identity) - - author-confidence:1.574027300038021 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:t9XAeXdXezYOtJX0wp3IY9/ZMkQ10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q9EQH3 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-775825|uniprotkb:Q61123|ensembl:ENSMUSP00000034131 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:vps35_mouse(display_long)|uniprotkb:Vesicle protein sorting 35(gene name synonym)|uniprotkb:Maternal-embryonic 3(gene name synonym)|uniprotkb:Vps35(gene name)|psi-mi:Vps35(display_short)|uniprotkb:Mem3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_075373.1|dip:DIP-32210N|ensembl:ENSMUSG00000031696(gene)|ensembl:ENSMUST00000034131(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006624"(vacuolar protein processing)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007040"(lysosome organization)|go:"GO:0007416"(synapse assembly)|go:"GO:0010008"(endosome membrane)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010821"(regulation of mitochondrion organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030904"(retromer complex)|go:"GO:0030906"(retromer, cargo-selective complex)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0031648"(protein destabilization)|go:"GO:0031748"(D1 dopamine receptor binding)|go:"GO:0032268"(regulation of cellular protein metabolic process)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032463"(negative regulation of protein homooligomerization)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043653"(mitochondrial fragmentation involved in apoptotic process)|go:"GO:0045056"(transcytosis)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050882"(voluntary musculoskeletal movement)|go:"GO:0060161"(positive regulation of dopamine receptor signaling pathway)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061357"(positive regulation of Wnt protein secretion)|go:"GO:0090141"(positive regulation of mitochondrial fission)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:0090326"(positive regulation of locomotion involved in locomotory behavior)|go:"GO:0097422"(tubular endosome)|go:"GO:0098793"(presynapse)|go:"GO:0098794"(postsynapse)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099003"(vesicle-mediated transport in synapse)|go:"GO:0099073"(mitochondrion-derived vesicle)|go:"GO:0099074"(mitochondrion to lysosome transport)|go:"GO:0099639"(neurotransmitter receptor transport, endosome to plasma membrane)|go:"GO:1901215"(negative regulation of neuron death)|go:"GO:1902823"(negative regulation of late endosome to lysosome transport)|go:"GO:1902950"(regulation of dendritic spine maintenance)|go:"GO:1903181"(positive regulation of dopamine biosynthetic process)|go:"GO:1903364"(positive regulation of cellular protein catabolic process)|go:"GO:1903828"(negative regulation of protein localization)|go:"GO:1905166"(negative regulation of lysosomal protein catabolic process)|go:"GO:2000331"(regulation of terminal button organization)|interpro:IPR005378(Vacuolar protein sorting-associated protein 35)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR042491|mint:Q9EQH3|rcsb pdb:6VAB|rcsb pdb:6VAC|reactome:R-MMU-3238698|entrezgene/locuslink:65114(identity) - - author-confidence:2.6093367058239725 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:dK5TqSajxrGKjiNwRjeZCV519XE10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q62384 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-11566629|ensembl:ENSMUSP00000117725 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:zpr1_mouse(display_long)|uniprotkb:Zfp259(gene name synonym)|uniprotkb:Zinc finger protein 259(gene name synonym)|uniprotkb:Znf259(gene name synonym)|uniprotkb:Zpr1(gene name)|psi-mi:Zpr1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_035882.1|ensembl:ENSMUSG00000032078(gene)|ensembl:ENSMUST00000156440(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0001833"(inner cell mass cell proliferation)|go:"GO:0001834"(trophectodermal cell proliferation)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006397"(mRNA processing)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008283"(cell population proliferation)|go:"GO:0008380"(RNA splicing)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0015030"(Cajal body)|go:"GO:0021510"(spinal cord development)|go:"GO:0030424"(axon)|go:"GO:0030426"(growth cone)|go:"GO:0030576"(Cajal body organization)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0031641"(regulation of myelination)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0042023"(DNA endoreduplication)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043204"(perikaryon)|go:"GO:0045927"(positive regulation of growth)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0061564"(axon development)|go:"GO:0071364"(cellular response to epidermal growth factor stimulus)|go:"GO:0071931"(positive regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0097504"(Gemini of coiled bodies)|go:"GO:1902742"(apoptotic process involved in development)|go:"GO:1990261"(pre-mRNA catabolic process)|go:"GO:2000672"(negative regulation of motor neuron apoptotic process)|interpro:IPR004457(Zinc finger, ZPR1-type)|interpro:IPR040141|interpro:IPR042451|interpro:IPR042452|rcsb pdb:2QKD|dip:DIP-46465N|entrezgene/locuslink:22687(identity) - - author-confidence:1.6381093822237374 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:jeflVhdrQB7TsdkWMRpnmtqTgiA10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q3V3R1 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-912208|uniprotkb:Q3TVQ0|uniprotkb:Q3V402|uniprotkb:Q8CAL0|uniprotkb:Q8K2N5|uniprotkb:Q80V98|ensembl:ENSMUSP00000036178|ensembl:ENSMUSP00000112870|ensembl:ENSMUSP00000112897 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:c1tm_mouse(display_long)|uniprotkb:Formyltetrahydrofolate synthetase(gene name synonym)|uniprotkb:Mthfd1l(gene name)|psi-mi:Mthfd1l(display_short)|uniprotkb:Fthfsdc1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_001164256.1|refseq:NP_001164257.1|refseq:NP_758512.3|ensembl:ENSMUSG00000040675(gene)|ensembl:ENSMUST00000043735(transcript)|ensembl:ENSMUST00000117291(transcript)|ensembl:ENSMUST00000120585(transcript)|go:"GO:0001843"(neural tube closure)|go:"GO:0004329"(formate-tetrahydrofolate ligase activity)|go:"GO:0004488"("methylenetetrahydrofolate dehydrogenase (NADP+) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006760"(folic acid-containing compound metabolic process)|go:"GO:0009257"(10-formyltetrahydrofolate biosynthetic process)|go:"GO:0015942"(formate metabolic process)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048702"(embryonic neurocranium morphogenesis)|go:"GO:0048703"(embryonic viscerocranium morphogenesis)|interpro:IPR000559(Formate-tetrahydrofolate ligase, FTHFS)|interpro:IPR000672(Tetrahydrofolate dehydrogenase/cyclohydrolase)|interpro:IPR020628|interpro:IPR020630|interpro:IPR020631|interpro:IPR027417|interpro:IPR036291|mint:Q3V3R1|rcsb pdb:2EO2|reactome:R-MMU-196757|entrezgene/locuslink:270685(identity) - - author-confidence:4.511806989766502 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:Hh58kyg8+iN4T2flIZSrUkUf1MI10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q3TYB1 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-11568015 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:q3tyb1_mouse(display_long)|uniprotkb:Rab15(gene name)|psi-mi:Rab15(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_001334334.1|refseq:NP_001334335.1|refseq:NP_001334336.1|refseq:NP_598811.3|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041826|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0032482"(Rab protein signal transduction)|entrezgene/locuslink:104886(identity) - - author-confidence:1.1165276436536424 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:OCrZc+ADlpyc+nrflNu1XYA6zT810090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62821 uniprotkb:Q91X96 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-11568008|uniprotkb:Q3U2X4|ensembl:ENSMUSP00000038335 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:mss4_mouse(display_long)|uniprotkb:Rab-interacting factor(gene name synonym)|uniprotkb:Rabif(gene name)|psi-mi:Rabif(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568013|imex:IM-24977-27 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_663485.1|ensembl:ENSMUSG00000042229(gene)|ensembl:ENSMUST00000047978(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005829"(cytosol)|go:"GO:0006892"(post-Golgi vesicle-mediated transport)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0008270"(zinc ion binding)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|interpro:IPR007515(Mss4)|interpro:IPR011057(Mss4-like)|interpro:IPR011323(Mss4/translationally controlled tumour-associated TCTP)|entrezgene/locuslink:98710(identity) - - author-confidence:9.465940998073966 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:dc1joeq2Ww0nnd04QgKW0HcsDZY10090 intact-crc:DAED1C3407057F5A|rigid:orZ92FGYkSIX6pR16oLKrhH23+E false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62823 uniprotkb:P63011 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568181|imex:IM-24977-28 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) - - author-confidence:15.166390286655753 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 intact-crc:B01D3E8209970029|rigid:kKRDjGLJSCde+ynfHr4lwWli7hI false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62823 uniprotkb:Q8BHC1 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568181|imex:IM-24977-28 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - - author-confidence:1.474601896758232 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:B01D3E8209970029|rigid:kKRDjGLJSCde+ynfHr4lwWli7hI false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62823 uniprotkb:A2APF3 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 intact:EBI-11566304|uniprotkb:Q3Y6S0|uniprotkb:B9EKP6|ensembl:ENSMUSP00000091845|ensembl:ENSMUSP00000135932 psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:ctcfl_mouse(display_long)|uniprotkb:Boris(gene name synonym)|uniprotkb:Brother of the regulator of imprinted sites(gene name synonym)|uniprotkb:CCCTC-binding factor(gene name synonym)|uniprotkb:CTCF paralog(gene name synonym)|uniprotkb:CTCF-like protein(gene name synonym)|uniprotkb:Ctcfl(gene name)|psi-mi:Ctcfl(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568181|imex:IM-24977-28 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) refseq:NP_001074856.1|ensembl:ENSMUSG00000070495(gene)|ensembl:ENSMUST00000094287(transcript)|ensembl:ENSMUST00000179693(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016571"(histone methylation)|go:"GO:0016604"(nuclear body)|go:"GO:0042393"(histone binding)|go:"GO:0043035"(chromatin insulator sequence binding)|go:"GO:0043046"(DNA methylation involved in gamete generation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|refseq:XP_017174657.1|dip:DIP-29209N|entrezgene/locuslink:664799(identity) - - caution:This sequence has been withdrawn from Uniprot.|crc64:BECF76F0C84FA7F0|author-confidence:16.59119023096325 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 rogid:Aimhm6eR/zsvBnioNpL8sTz0FcM10090 intact-crc:B01D3E8209970029|rigid:kKRDjGLJSCde+ynfHr4lwWli7hI false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62823 uniprotkb:P35276 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568181|imex:IM-24977-28 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) - - author-confidence:18.745704804728152 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 intact-crc:B01D3E8209970029|rigid:kKRDjGLJSCde+ynfHr4lwWli7hI false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62823 uniprotkb:Q6ZWX6 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 intact:EBI-1202234|uniprotkb:Q3TIQ0|ensembl:ENSMUSP00000071214 psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:if2a_mouse(display_long)|uniprotkb:Eif2s1(gene name)|psi-mi:Eif2s1(display_short)|uniprotkb:Eif2a(gene name synonym)|uniprotkb:Eukaryotic translation initiation factor 2 subunit alpha(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568181|imex:IM-24977-28 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) refseq:NP_080390.1|go:"GO:0006412"(translation)|go:"GO:0007568"(aging)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032057"(negative regulation of translational initiation in response to stress)|go:"GO:0033290"(eukaryotic 48S preinitiation complex)|go:"GO:0034063"(stress granule assembly)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0034605"(cellular response to heat)|go:"GO:0034644"(cellular response to UV)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0036499"(PERK-mediated unfolded protein response)|go:"GO:0043022"(ribosome binding)|go:"GO:0043558"(regulation of translational initiation in response to stress)|go:"GO:0043614"(multi-eIF complex)|go:"GO:0044207"(translation initiation ternary complex)|go:"GO:0045202"(synapse)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0097451"(glial limiting end-foot)|go:"GO:1901216"(positive regulation of neuron death)|go:"GO:1905098"(negative regulation of guanyl-nucleotide exchange factor activity)|go:"GO:1990737"(response to manganese-induced endoplasmic reticulum stress)|go:"GO:2000676"(positive regulation of type B pancreatic cell apoptotic process)|interpro:IPR003029(S1, RNA binding)|interpro:IPR011488(Eukaryotic translation initiation factor 2, alpha subunit)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR022967|interpro:IPR024054|interpro:IPR024055|interpro:IPR044126|reactome:R-MMU-156827|reactome:R-MMU-381042|reactome:R-MMU-382556|reactome:R-MMU-72649|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-72731|go:"GO:0005851"(eukaryotic translation initiation factor 2B complex)|ensembl:ENSMUSG00000021116(gene)|ensembl:ENSMUST00000071230(transcript)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005850"(eukaryotic translation initiation factor 2 complex)|entrezgene/locuslink:13665(identity) - - author-confidence:1.0274553344317132 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 rogid:FKeyVi3QK42ZWZl8m/PyPoleIDQ10090 intact-crc:B01D3E8209970029|rigid:kKRDjGLJSCde+ynfHr4lwWli7hI false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62823 uniprotkb:Q8BSP2 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 intact:EBI-11568170|uniprotkb:Q8C2N3|uniprotkb:Q8C4X8|uniprotkb:Q9CT99|uniprotkb:Q3TNI4|uniprotkb:Q99L21|uniprotkb:Q8C3K9|uniprotkb:Q8CAZ3|ensembl:ENSMUSP00000074139 psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:cndh2_mouse(display_long)|uniprotkb:D15Ertd785e(gene name synonym)|uniprotkb:Kleisin-beta(gene name synonym)|uniprotkb:Non-SMC condensin II complex subunit H2(gene name synonym)|uniprotkb:Ncaph2(gene name)|psi-mi:Ncaph2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568181|imex:IM-24977-28 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) refseq:NP_001108604.1|refseq:NP_001258530.1|ensembl:ENSMUSG00000008690(gene)|ensembl:ENSMUST00000074552(transcript)|go:"GO:0000793"(condensed chromosome)|go:"GO:0000796"(condensin complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0007076"(mitotic chromosome condensation)|go:"GO:0007143"(female meiotic nuclear division)|go:"GO:0010032"(meiotic chromosome condensation)|go:"GO:0030054"(cell junction)|go:"GO:0033077"(T cell differentiation in thymus)|go:"GO:0045171"(intercellular bridge)|go:"GO:0051306"(mitotic sister chromatid separation)|go:"GO:0051309"(female meiosis chromosome separation)|interpro:IPR009378(Protein of unknown function DUF1032)|interpro:IPR031719|interpro:IPR031737|interpro:IPR031739|reactome:R-MMU-2299718|entrezgene/locuslink:52683(identity) - - author-confidence:1.3530422923892262 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 rogid:eax6CMLQZEt0FkFfiSdpjFFVkJA10090 intact-crc:B01D3E8209970029|rigid:kKRDjGLJSCde+ynfHr4lwWli7hI false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P62823 uniprotkb:P55258 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 intact:EBI-398411|uniprotkb:Q8VCF6|ensembl:ENSMUSP00000003121 psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:rab8a_mouse(display_long)|uniprotkb:Rab8a(gene name)|psi-mi:Rab8a(display_short)|uniprotkb:Mel(gene name synonym)|uniprotkb:Rab8(gene name synonym)|uniprotkb:Oncogene c-mel(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568181|imex:IM-24977-28 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) refseq:NP_075615.2|dip:DIP-31053N|ensembl:ENSMUSG00000003037(gene)|ensembl:ENSMUST00000003121(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0014069"(postsynaptic density)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0045202"(synapse)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097546"(ciliary base)|go:"GO:0097730"(non-motile cilium)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098969"(neurotransmitter receptor transport to postsynaptic membrane)|go:"GO:0099003"(vesicle-mediated transport in synapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P55258|rcsb pdb:2FU5|reactome:R-MMU-2565942|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0098978"(glutamatergic synapse)|entrezgene/locuslink:17274(identity) - - author-confidence:1.165794091239319 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 rogid:SE+1h+U6C8cAN2UTBIDapsUt4zA10090 intact-crc:B01D3E8209970029|rigid:kKRDjGLJSCde+ynfHr4lwWli7hI false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P11499 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-492813|uniprotkb:O89078|uniprotkb:Q3UIQ7|ensembl:ENSMUSP00000024739 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:hs90b_mouse(display_long)|uniprotkb:Heat shock 84 kDa(gene name synonym)|uniprotkb:Tumor-specific transplantation 84 kDa antigen(gene name synonym)|uniprotkb:Hsp90ab1(gene name)|psi-mi:Hsp90ab1(display_short)|uniprotkb:Hsp84(gene name synonym)|uniprotkb:Hsp84-1(gene name synonym)|uniprotkb:Hspcb(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_032328.2|go:"GO:0009651"(response to salt stress)|go:"GO:0009986"(cell surface)|go:"GO:0010033"(response to organic substance)|go:"GO:0016234"(inclusion body)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017098"(sulfonylurea receptor binding)|go:"GO:0019062"(virion attachment to host cell)|go:"GO:0019900"(kinase binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0021955"(central nervous system neuron axonogenesis)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030235"(nitric-oxide synthase regulator activity)|go:"GO:0030511"(positive regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031526"(brush border membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032092"(positive regulation of protein binding)|go:"GO:0032435"(negative regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0032516"(positive regulation of phosphoprotein phosphatase activity)|go:"GO:0032564"(dATP binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:1901799"(negative regulation of proteasomal protein catabolic process)|go:"GO:1903660"(negative regulation of complement-dependent cytotoxicity)|go:"GO:1903827"|go:"GO:1904031"(positive regulation of cyclin-dependent protein kinase activity)|go:"GO:1905323"(telomerase holoenzyme complex assembly)|go:"GO:1990226"(histone methyltransferase binding)|go:"GO:1990565"(HSP90-CDC37 chaperone complex)|go:"GO:1990913"(sperm head plasma membrane)|go:"GO:1990917"(ooplasm)|go:"GO:2000010"(positive regulation of protein localization to cell surface)|interpro:IPR001404(Heat shock protein Hsp90)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR019805|interpro:IPR020568|interpro:IPR020575|interpro:IPR036890|interpro:IPR037196|mint:P11499|reactome:R-MMU-168928|reactome:R-MMU-2029482|reactome:R-MMU-3371497|reactome:R-MMU-3371511|reactome:R-MMU-3371568|reactome:R-MMU-3371571|reactome:R-MMU-399954|reactome:R-MMU-6798695|reactome:R-MMU-844456|reactome:R-MMU-8852276|reactome:R-MMU-8937144|reactome:R-MMU-8939211|reactome:R-MMU-9013418|reactome:R-MMU-9018519|ensembl:ENSMUSG00000023944(gene)|ensembl:ENSMUST00000024739(transcript)|go:"GO:0001890"(placenta development)|go:"GO:0002134"(UTP binding)|go:"GO:0002135"(CTP binding)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0007004"(telomere maintenance via telomerase)|go:"GO:0008180"(COP9 signalosome)|go:"GO:0034605"(cellular response to heat)|go:"GO:0034751"(aryl hydrocarbon receptor complex)|go:"GO:0042220"(response to cocaine)|go:"GO:0042277"(peptide binding)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0042470"(melanosome)|go:"GO:0042493"|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0043008"(ATP-dependent protein binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0044294"(dendritic growth cone)|go:"GO:0044295"(axonal growth cone)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045597"(positive regulation of cell differentiation)|go:"GO:0045793"(positive regulation of cell size)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0048156"(tau protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048675"(axon extension)|go:"GO:0050821"(protein stabilization)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051248"(negative regulation of protein metabolic process)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:0060334"(regulation of interferon-gamma-mediated signaling pathway)|go:"GO:0060338"(regulation of type I interferon-mediated signaling pathway)|go:"GO:0070182"(DNA polymerase binding)|go:"GO:0071353"(cellular response to interleukin-4)|go:"GO:0071407"(cellular response to organic cyclic compound)|go:"GO:0071902"(positive regulation of protein serine/threonine kinase activity)|go:"GO:0097435"(supramolecular fiber organization)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0120293"(dynein axonemal particle)|go:"GO:1901389"(negative regulation of transforming growth factor beta activation)|dip:DIP-461N|entrezgene/locuslink:15516(identity) - - author-confidence:1.269325031817914 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:5/MXDESVXdwuWna0s87Ap19aLMA10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q99KV1 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-8328260|uniprotkb:Q8VHB1|uniprotkb:Q8VCY1|intact:MINT-1847287|uniprotkb:A6X957|uniprotkb:Q543I7|uniprotkb:Q8BK79|ensembl:ENSMUSP00000004574|ensembl:ENSMUSP00000126828|ensembl:ENSMUSP00000137542 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:djb11_mouse(display_long)|uniprotkb:Dnajb11(gene name)|psi-mi:Dnajb11(display_short)|uniprotkb:ER-associated Hsp40 co-chaperone(gene name synonym)|uniprotkb:ER-associated DNAJ(gene name synonym)|uniprotkb:APOBEC1-binding protein 2(gene name synonym)|uniprotkb:Endoplasmic reticulum DNA J domain-containing protein 3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_080676.3|refseq:NP_001177733.1|refseq:NP_001177734.1|dip:DIP-60531N|ensembl:ENSMUSG00000004460(gene)|ensembl:ENSMUST00000004574(transcript)|ensembl:ENSMUST00000166487(transcript)|ensembl:ENSMUST00000178320(transcript)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005788"(endoplasmic reticulum lumen)|go:"GO:0006457"(protein folding)|go:"GO:0016556"(mRNA modification)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0034663"(endoplasmic reticulum chaperone complex)|go:"GO:0050768"(negative regulation of neurogenesis)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051604"(protein maturation)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0101031"(chaperone complex)|interpro:IPR001623(Heat shock protein DnaJ, N-terminal)|interpro:IPR002939(Chaperone DnaJ, C-terminal)|interpro:IPR008971(HSP40/DnaJ peptide-binding)|interpro:IPR018253|interpro:IPR036869|mint:Q99KV1|entrezgene/locuslink:67838(identity) - - comment:mint|author-confidence:1.6327543335731205 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:AwepE58LUoN43LmBMkof6jEPNCA10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q9D554 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-8338145|intact:MINT-1853954|ensembl:ENSMUSP00000030734 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:sf3a3_mouse(display_long)|uniprotkb:Sf3a3(gene name)|psi-mi:Sf3a3(display_short)|uniprotkb:Sap61(gene name synonym)|uniprotkb:Spliceosome-associated protein 61(gene name synonym)|uniprotkb:SF3a60(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_083433.1|ensembl:ENSMUSG00000028902(gene)|ensembl:ENSMUST00000030734(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005686"(U2 snRNP)|go:"GO:0006397"(mRNA processing)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016607"(nuclear speck)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1903241"(U2-type prespliceosome assembly)|interpro:IPR000690(Zinc finger, C2H2-type matrin)|interpro:IPR021966|interpro:IPR024598|interpro:IPR031774|interpro:IPR031776|mint:Q9D554|reactome:R-MMU-72163|entrezgene/locuslink:75062(identity) - - function:"Subunit of the splicing factor SF3A required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex"|comment:mint|author-confidence:4.4687880989398785 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:1uFDDd2qMaHNBnQBzY/Go+IVACc10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q6PAR5 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-8318309|uniprotkb:Q9CRS2|uniprotkb:Q80ZK4|intact:MINT-4125168|uniprotkb:A2AR17|uniprotkb:Q6ZPP0|uniprotkb:Q3TNS1|uniprotkb:Q80V37|uniprotkb:Q9CTI1|uniprotkb:A2AR09|uniprotkb:Q8BTS5|uniprotkb:Q3UYD5|uniprotkb:A2AR10|uniprotkb:A2AR18|uniprotkb:Q3UDL0|uniprotkb:A0PJI8|ensembl:ENSMUSP00000108723 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:gapd1_mouse(display_long)|uniprotkb:Gapvd1(gene name)|psi-mi:Gapvd1(display_short)|uniprotkb:Gapex5(gene name synonym)|uniprotkb:Kiaa1521(gene name synonym)|uniprotkb:Rab5-activating protein 6(gene name synonym)|uniprotkb:GAPex-5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:XP_011237449.1|refseq:XP_011237450.1|refseq:NP_079985.2|ensembl:ENSMUSG00000026867(gene)|ensembl:ENSMUST00000113099(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006897"(endocytosis)|go:"GO:0007165"(signal transduction)|go:"GO:0032794"(GTPase activating protein binding)|go:"GO:0043087"(regulation of GTPase activity)|go:"GO:0051223"(regulation of protein transport)|interpro:IPR001936(Ras GTPase-activating protein)|interpro:IPR003123(Vacuolar sorting protein 9)|interpro:IPR008936(Rho GTPase activation protein)|interpro:IPR037191|interpro:IPR041545|mint:Q6PAR5|reactome:R-MMU-8856828|reactome:R-MMU-8876198|entrezgene/locuslink:66691(identity) - - comment:mint|author-confidence:3.828859785191148 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:NMkiRQlKeIDPhZDCyCF5UZ3lmPE10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q62186 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-11568249|ensembl:ENSMUSP00000002090 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:ssrd_mouse(display_long)|uniprotkb:Signal sequence receptor subunit delta(gene name synonym)|uniprotkb:Ssr4(gene name)|psi-mi:Ssr4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_033305.1|ensembl:ENSMUSG00000002014(gene)|ensembl:ENSMUST00000002090(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005784"(Sec61 translocon complex)|go:"GO:0012505"(endomembrane system)|go:"GO:0016021"(integral component of membrane)|interpro:IPR008855(Translocon-associated)|mint:Q62186|entrezgene/locuslink:20832(identity) - - author-confidence:2.5847034820311343 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:4gupEFkrX+TomW/+FEpKtmKcfWU10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P67778 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-298507|uniprotkb:P24142|uniprotkb:Q3UB75|uniprotkb:Q5SQG4|ensembl:ENSMUSP00000119603 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:phb_mouse(display_long)|uniprotkb:Phb(gene name)|psi-mi:Phb(display_short)|uniprotkb:B-cell receptor-associated protein 32(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) ensembl:ENSMUSG00000038845(gene)|ensembl:ENSMUST00000125172(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001541"(ovarian follicle development)|go:"GO:0001552"(ovarian follicle atresia)|go:"GO:0001850"(complement component C3a binding)|go:"GO:0001851"(complement component C3b binding)|go:"GO:0002639"(positive regulation of immunoglobulin production)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007202"(activation of phospholipase C activity)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009986"(cell surface)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0010944"(negative regulation of transcription by competitive promoter binding)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016575"(histone deacetylation)|go:"GO:0019899"(enzyme binding)|go:"GO:0023035"(CD40 signaling pathway)|go:"GO:0030061"(mitochondrial crista)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0031100"(animal organ regeneration)|go:"GO:0031315"(extrinsic component of mitochondrial outer membrane)|go:"GO:0031871"(proteinase activated receptor binding)|go:"GO:0032740"(positive regulation of interleukin-17 production)|go:"GO:0035632"(mitochondrial prohibitin complex)|go:"GO:0035902"(response to immobilization stress)|go:"GO:0042113"(B cell activation)|go:"GO:0042177"(negative regulation of protein catabolic process)|go:"GO:0042493"|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0039529"(RIG-I signaling pathway)|go:"GO:0044830"(modulation by host of viral RNA genome replication)|go:"GO:0045471"(response to ethanol)|go:"GO:0045745"(positive regulation of G protein-coupled receptor signaling pathway)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045917"(positive regulation of complement activation)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0050821"(protein stabilization)|go:"GO:0050847"(progesterone receptor signaling pathway)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0060766"(negative regulation of androgen receptor signaling pathway)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0071354"(cellular response to interleukin-6)|go:"GO:0071897"(DNA biosynthetic process)|go:"GO:0072538"(T-helper 17 type immune response)|go:"GO:0098891"(extrinsic component of presynaptic active zone membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0140374"(antiviral innate immune response)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1990051"(activation of protein kinase C activity)|go:"GO:2000323"(negative regulation of glucocorticoid receptor signaling pathway)|interpro:IPR000163(Prohibitin)|interpro:IPR001107(Band 7 protein)|interpro:IPR036013|mint:P67778|reactome:R-MMU-5673000|reactome:R-MMU-8949664|refseq:NP_032857.1|entrezgene/locuslink:18673(identity) - - author-confidence:102.32034258031234 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:eUStcZ9Mu7+7MHr/GJXFwwJY/Fc10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q9CZT8 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-911649|uniprotkb:Q80WV9|ensembl:ENSMUSP00000003502|ensembl:ENSMUSP00000102261|uniprotkb:Q920F1 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:rab3b_mouse(display_long)|uniprotkb:Rab3b(gene name)|psi-mi:Rab3b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) ensembl:ENSMUSG00000003411(gene)|ensembl:ENSMUST00000003502(transcript)|ensembl:ENSMUST00000106650(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051586"(positive regulation of dopamine uptake involved in synaptic transmission)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097494"(regulation of vesicle size)|go:"GO:0098691"(dopaminergic synapse)|go:"GO:0098693"(regulation of synaptic vesicle cycle)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:Q9CZT8|reactome:R-MMU-8873719|refseq:NP_076026.1|entrezgene/locuslink:69908(identity) - - author-confidence:99.32080132948008 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:4WkkwI5ty+Y60GheT3a0s2RVr2Q10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q8BHC1 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - - author-confidence:1.6602435833129545 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P47738 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-2308120|ensembl:ENSMUSP00000031411 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:aldh2_mouse(display_long)|uniprotkb:Aldh2(gene name)|psi-mi:Aldh2(display_short)|uniprotkb:Ahd-1(gene name synonym)|uniprotkb:Ahd1(gene name synonym)|uniprotkb:ALDH class 2(gene name synonym)|uniprotkb:AHD-M1(gene name synonym)|uniprotkb:ALDHI(gene name synonym)|uniprotkb:ALDH-E2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_033786.1|ensembl:ENSMUSG00000029455(gene)|ensembl:ENSMUST00000031411(transcript)|go:"GO:0004029"("aldehyde dehydrogenase (NAD+) activity")|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006068"(ethanol catabolic process)|go:"GO:0006117"(acetaldehyde metabolic process)|go:"GO:0008631"(intrinsic apoptotic signaling pathway in response to oxidative stress)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043878"("glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity")|go:"GO:0048149"(behavioral response to ethanol)|go:"GO:0050727"(regulation of inflammatory response)|go:"GO:0051287"(NAD binding)|go:"GO:0070404"(NADH binding)|go:"GO:0110095"(cellular detoxification of aldehyde)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016160(Aldehyde dehydrogenase, conserved site)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR029510|mint:P47738|reactome:R-MMU-380612|reactome:R-MMU-71384|entrezgene/locuslink:11669(identity) - - author-confidence:1.2050644480105102 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:C4L2qigIlQeaZH4RsNocJovkPMw10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:A2APF3 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-11566304|uniprotkb:Q3Y6S0|uniprotkb:B9EKP6|ensembl:ENSMUSP00000091845|ensembl:ENSMUSP00000135932 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:ctcfl_mouse(display_long)|uniprotkb:Boris(gene name synonym)|uniprotkb:Brother of the regulator of imprinted sites(gene name synonym)|uniprotkb:CCCTC-binding factor(gene name synonym)|uniprotkb:CTCF paralog(gene name synonym)|uniprotkb:CTCF-like protein(gene name synonym)|uniprotkb:Ctcfl(gene name)|psi-mi:Ctcfl(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_001074856.1|ensembl:ENSMUSG00000070495(gene)|ensembl:ENSMUST00000094287(transcript)|ensembl:ENSMUST00000179693(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016571"(histone methylation)|go:"GO:0016604"(nuclear body)|go:"GO:0042393"(histone binding)|go:"GO:0043035"(chromatin insulator sequence binding)|go:"GO:0043046"(DNA methylation involved in gamete generation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|refseq:XP_017174657.1|dip:DIP-29209N|entrezgene/locuslink:664799(identity) - - caution:This sequence has been withdrawn from Uniprot.|crc64:BECF76F0C84FA7F0|author-confidence:20.798116450887957 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:Aimhm6eR/zsvBnioNpL8sTz0FcM10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P35283 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-772065|uniprotkb:Q0PD43|uniprotkb:Q9CUW7|ensembl:ENSMUSP00000128645 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:rab12_mouse(display_long)|uniprotkb:Rab-13(gene name synonym)|uniprotkb:Rab12(gene name)|psi-mi:Rab12(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_077768.2|ensembl:ENSMUSG00000023460(gene)|ensembl:ENSMUST00000167962(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005768"(endosome)|go:"GO:0005776"(autophagosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008333"(endosome to lysosome transport)|go:"GO:0009306"(protein secretion)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030141"(secretory granule)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0044257"(cellular protein catabolic process)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0071346"(cellular response to interferon-gamma)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041830|mint:P35283|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19328(identity) - - author-confidence:3.918289097656452 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:/ExkwhEpAR43tYQbj32hm6maFwU10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q6PIC6 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-769101|ensembl:ENSMUSP00000079691 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:at1a3_mouse(display_long)|uniprotkb:Sodium pump subunit alpha-3(gene name synonym)|uniprotkb:"Na(+)/K(+) ATPase alpha(III) subunit"(gene name synonym)|uniprotkb:Atp1a3(gene name)|psi-mi:Atp1a3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_001277398.1|ensembl:ENSMUSG00000040907(gene)|ensembl:ENSMUST00000080882(transcript)|go:"GO:0001540"(amyloid-beta binding)|go:"GO:0001917"(photoreceptor inner segment)|go:"GO:0005391"("P-type sodium:potassium-exchanging transporter activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0005890"("sodium:potassium-exchanging ATPase complex")|go:"GO:0006813"(potassium ion transport)|go:"GO:0006814"(sodium ion transport)|go:"GO:0006883"(cellular sodium ion homeostasis)|go:"GO:0007613"(memory)|go:"GO:0008344"(adult locomotory behavior)|go:"GO:0008542"(visual learning)|go:"GO:0016020"(membrane)|go:"GO:0030007"(cellular potassium ion homeostasis)|go:"GO:0030424"(axon)|go:"GO:0031090"(organelle membrane)|go:"GO:0031748"(D1 dopamine receptor binding)|go:"GO:0035235"(ionotropic glutamate receptor signaling pathway)|go:"GO:0036376"(sodium ion export across plasma membrane)|go:"GO:0042383"(sarcolemma)|go:"GO:0042493"|go:"GO:0043025"(neuronal cell body)|go:"GO:0043209"(myelin sheath)|go:"GO:0043395"(heparan sulfate proteoglycan binding)|go:"GO:0044305"(calyx of Held)|go:"GO:0044326"(dendritic spine neck)|go:"GO:0044327"(dendritic spine head)|reactome:R-MMU-936837|go:"GO:0046872"(metal ion binding)|go:"GO:0051087"(chaperone binding)|go:"GO:0060048"(cardiac muscle contraction)|go:"GO:0086036"(regulation of cardiac muscle cell membrane potential)|go:"GO:0086037"("P-type sodium:potassium-exchanging transporter activity involved in regulation of cardiac muscle cell membrane potential")|go:"GO:0098794"(postsynapse)|go:"GO:0098984"(neuron to neuron synapse)|go:"GO:0099056"(integral component of presynaptic membrane)|go:"GO:0099520"(ion antiporter activity involved in regulation of presynaptic membrane potential)|go:"GO:1902600"(proton transmembrane transport)|go:"GO:1904646"(cellular response to amyloid-beta)|go:"GO:1990535"(neuron projection maintenance)|go:"GO:1990573"(potassium ion import across plasma membrane)|interpro:IPR001757(ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter)|interpro:IPR004014(ATPase, P-type cation-transporter, N-terminal)|interpro:IPR005775(ATPase, P-type cation exchange, alpha subunit, eukaryotic)|interpro:IPR006068(ATPase, P-type cation-transporter, C-terminal)|interpro:IPR008250(E1-E2 ATPase-associated region)|interpro:IPR018303|interpro:IPR023214|interpro:IPR023298|interpro:IPR023299|interpro:IPR036412|interpro:IPR044492|mint:Q6PIC6|go:"GO:0045202"(synapse)|reactome:R-MMU-5578775|entrezgene/locuslink:232975(identity) - - author-confidence:3.9331047322564925 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:1sz4qkpfVGTvDfvmBVIE3wsH2Rs10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q3V3R1 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-912208|uniprotkb:Q3TVQ0|uniprotkb:Q3V402|uniprotkb:Q8CAL0|uniprotkb:Q8K2N5|uniprotkb:Q80V98|ensembl:ENSMUSP00000036178|ensembl:ENSMUSP00000112870|ensembl:ENSMUSP00000112897 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:c1tm_mouse(display_long)|uniprotkb:Formyltetrahydrofolate synthetase(gene name synonym)|uniprotkb:Mthfd1l(gene name)|psi-mi:Mthfd1l(display_short)|uniprotkb:Fthfsdc1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_001164256.1|refseq:NP_001164257.1|refseq:NP_758512.3|ensembl:ENSMUSG00000040675(gene)|ensembl:ENSMUST00000043735(transcript)|ensembl:ENSMUST00000117291(transcript)|ensembl:ENSMUST00000120585(transcript)|go:"GO:0001843"(neural tube closure)|go:"GO:0004329"(formate-tetrahydrofolate ligase activity)|go:"GO:0004488"("methylenetetrahydrofolate dehydrogenase (NADP+) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006760"(folic acid-containing compound metabolic process)|go:"GO:0009257"(10-formyltetrahydrofolate biosynthetic process)|go:"GO:0015942"(formate metabolic process)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048702"(embryonic neurocranium morphogenesis)|go:"GO:0048703"(embryonic viscerocranium morphogenesis)|interpro:IPR000559(Formate-tetrahydrofolate ligase, FTHFS)|interpro:IPR000672(Tetrahydrofolate dehydrogenase/cyclohydrolase)|interpro:IPR020628|interpro:IPR020630|interpro:IPR020631|interpro:IPR027417|interpro:IPR036291|mint:Q3V3R1|rcsb pdb:2EO2|reactome:R-MMU-196757|entrezgene/locuslink:270685(identity) - - author-confidence:3.601270217539926 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:Hh58kyg8+iN4T2flIZSrUkUf1MI10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P62855 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-6260985|ensembl:ENSMUSP00000026420|uniprotkb:P70394|uniprotkb:Q06722|uniprotkb:P02383 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:rs26_mouse(display_long)|uniprotkb:Rps26(gene name)|psi-mi:Rps26(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) ensembl:ENSMUSG00000025362(gene)|ensembl:ENSMUST00000026420(transcript)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0033119"(negative regulation of RNA splicing)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0098556"(cytoplasmic side of rough endoplasmic reticulum membrane)|interpro:IPR000892(Ribosomal protein S26e)|interpro:IPR038551|reactome:R-MMU-156827|reactome:R-MMU-1799339|reactome:R-MMU-6791226|reactome:R-MMU-72649|reactome:R-MMU-72689|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-975956|reactome:R-MMU-975957|mint:P62855|refseq:NP_038793.2|entrezgene/locuslink:27370(identity) - - author-confidence:1.4647843075654343 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:bo2ruYMNjjLCMo/kwAWzmlJrrjU10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P25799 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-643958|uniprotkb:B2RRQ6|uniprotkb:Q3TZE8|uniprotkb:Q3V2V6|uniprotkb:Q6TDG8|uniprotkb:Q75ZL1|uniprotkb:Q80Y21|uniprotkb:Q8C712|ensembl:ENSMUSP00000029812|ensembl:ENSMUSP00000128345 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:nfkb1_mouse(display_long)|uniprotkb:DNA-binding factor KBF1(gene name synonym)|uniprotkb:EBP-1(gene name synonym)|uniprotkb:NF-kappa-B1 p84/NF-kappa-B1 p98(gene name synonym)|uniprotkb:Nfkb1(gene name)|psi-mi:Nfkb1(display_short)|uniprotkb:Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_032715.2|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048535"(lymph node development)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071260"(cellular response to mechanical stimulus)|go:"GO:0071316"(cellular response to nicotine)|go:"GO:0071322"(cellular response to carbohydrate stimulus)|go:"GO:0071345"(cellular response to cytokine stimulus)|go:"GO:0071347"(cellular response to interleukin-1)|go:"GO:0071354"(cellular response to interleukin-6)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071359"(cellular response to dsRNA)|go:"GO:0071407"(cellular response to organic cyclic compound)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:1900127"(positive regulation of hyaluronan biosynthetic process)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|rcsb pdb:1U3Y|rcsb pdb:1U3Z|rcsb pdb:1U41|rcsb pdb:1U42|rcsb pdb:1VKX|rcsb pdb:2I9T|rcsb pdb:2V2T|rcsb pdb:3JV4|reactome:R-MMU-1169091|reactome:R-MMU-1810476|reactome:R-MMU-193692|reactome:R-MMU-202424|reactome:R-MMU-209560|reactome:R-MMU-2871837|reactome:R-MMU-3134963|reactome:R-MMU-3214841|reactome:R-MMU-445989|reactome:R-MMU-448706|reactome:R-MMU-5607764|reactome:R-MMU-5621575|rcsb pdb:1U3J|reactome:R-MMU-5684264|reactome:R-MMU-6798695|ensembl:ENSMUSG00000028163(gene)|ensembl:ENSMUST00000029812(transcript)|ensembl:ENSMUST00000164430(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001223"(transcription coactivator binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001818"(negative regulation of cytokine production)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006915"(apoptotic process)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0007165"(signal transduction)|refseq:XP_006501169.1|go:"GO:1902895"(positive regulation of miRNA transcription)|go:"GO:1904385"(cellular response to angiotensin)|go:"GO:1904630"(cellular response to diterpene)|go:"GO:1904632"(cellular response to glucoside)|go:"GO:1990416"(cellular response to brain-derived neurotrophic factor stimulus)|go:"GO:2000630"(positive regulation of miRNA metabolic process)|go:"GO:2000637"(positive regulation of gene silencing by miRNA)|interpro:IPR000451(NF-kappa-B/Rel/dorsal)|interpro:IPR000488(Death)|interpro:IPR002110(Ankyrin)|interpro:IPR002909(Cell surface receptor IPT/TIG)|interpro:IPR008967(p53-like transcription factor, DNA-binding)|interpro:IPR011029(DEATH-like)|interpro:IPR011539(Rel homology)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR020683|interpro:IPR030492|interpro:IPR030503|interpro:IPR032397|interpro:IPR033926|interpro:IPR036770|interpro:IPR037059|mint:P25799|rcsb pdb:1BFS|rcsb pdb:1IKN|rcsb pdb:1LE5|rcsb pdb:1LE9|go:"GO:1901653"(cellular response to peptide)|rcsb pdb:1LEI|rcsb pdb:1NFK|rcsb pdb:1OOA|rcsb pdb:1U36|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010956"(negative regulation of calcidiol 1-monooxygenase activity)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0019899"(enzyme binding)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0032695"(negative regulation of interleukin-12 production)|go:"GO:0032991"(protein-containing complex)|go:"GO:0035994"(response to muscle stretch)|go:"GO:0042802"(identical protein binding)|go:"GO:0042805"(actinin binding)|go:"GO:0043005"(neuron projection)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0010628"(positive regulation of gene expression)|reactome:R-MMU-933542|reactome:R-MMU-9020702|dip:DIP-85N|entrezgene/locuslink:18033(identity) - - author-confidence:2.6395034798891146 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:OiCZGnyznh4scSRI6QeIuv4pHbA10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q8QZY9 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-6094674|ensembl:ENSMUSP00000075709 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:sf3b4_mouse(display_long)|uniprotkb:Sf3b4(gene name)|psi-mi:Sf3b4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_694693.1|ensembl:ENSMUSG00000068856(gene)|ensembl:ENSMUST00000076372(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0048026"(positive regulation of mRNA splicing, via spliceosome)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:1990935"(splicing factor binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034158|interpro:IPR034159|interpro:IPR035979|mint:Q8QZY9|reactome:R-MMU-72163|reactome:R-MMU-72165|entrezgene/locuslink:107701(identity) - - author-confidence:4.493778325976091 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:eYaqZLWduL1MsiM0jP2BLXuEkBw10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q920H4 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-11568226|uniprotkb:Q0VBI9|uniprotkb:A2AHU3|ensembl:ENSMUSP00000097185 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:acm5_mouse(display_long)|uniprotkb:Chrm5(gene name)|psi-mi:Chrm5(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_991352.2|refseq:XP_006499162.1|ensembl:ENSMUSG00000074939(gene)|ensembl:ENSMUST00000099589(transcript)|go:"GO:0001696"(gastric acid secretion)|go:"GO:0004993"(G protein-coupled serotonin receptor activity)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0007187"(G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger)|go:"GO:0007197"(adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0015872"(dopamine transport)|go:"GO:0016907"(G protein-coupled acetylcholine receptor activity)|go:"GO:0016934"(extracellularly glycine-gated chloride channel activity)|go:"GO:0019226"(transmission of nerve impulse)|go:"GO:0030425"(dendrite)|go:"GO:0030594"(neurotransmitter receptor activity)|go:"GO:0045202"(synapse)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0060304"(regulation of phosphatidylinositol dephosphorylation)|interpro:IPR000276(GPCR, rhodopsin-like)|interpro:IPR000995(Muscarinic acetylcholine receptor)|interpro:IPR017452(GPCR, rhodopsin-like superfamily)|reactome:R-MMU-390648|reactome:R-MMU-416476|interpro:IPR000502(Muscarinic acetylcholine receptor M5)|entrezgene/locuslink:213788(identity) - - author-confidence:50.64733613104875 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:J72Rocs0oXIPFkf5+O4mIeH7sB810090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P63154 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-9989586|uniprotkb:Q542E8|uniprotkb:Q9CQC1|ensembl:ENSMUSP00000001818 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:crnl1_mouse(display_long)|uniprotkb:Crnkl1(gene name)|psi-mi:Crnkl1(display_short)|uniprotkb:Crooked neck homolog(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_080096.1|ensembl:ENSMUSG00000001767(gene)|ensembl:ENSMUST00000001818(transcript)|go:"GO:0000245"(spliceosomal complex assembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0016607"(nuclear speck)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|reactome:R-MMU-72163|entrezgene/locuslink:66877(identity) - - author-confidence:10.17209341346866 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:9DgysHExtqmhzmps9wzWd8iF9wo10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q91ZR1 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-11565983|ensembl:ENSMUSP00000090727 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) - - author-confidence:76.03401526902871 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q9EPE9 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-6665597|ensembl:ENSMUSP00000034326|uniprotkb:B2RS54 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:at131_mouse(display_long)|uniprotkb:Endoplasmic reticulum P5A-ATPase(gene name synonym)|uniprotkb:Atp13a1(gene name)|psi-mi:Atp13a1(display_short)|uniprotkb:Atp13a(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) interpro:IPR023298|interpro:IPR023299|interpro:IPR036412|interpro:IPR044492|mint:Q9EPE9|reactome:R-MMU-936837|ensembl:ENSMUST00000034326(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006874"(cellular calcium ion homeostasis)|go:"GO:0015031"(protein transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019829"(ATPase-coupled cation transmembrane transporter activity)|go:"GO:0046872"(metal ion binding)|go:"GO:0140567"(transmembrane protein dislocase activity)|go:"GO:0140569"(extraction of mislocalized protein from ER membrane)|interpro:IPR001757(ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter)|interpro:IPR006544("P-type ATPase of unknown pump specificity (type V)")|interpro:IPR008250(E1-E2 ATPase-associated region)|interpro:IPR018303|interpro:IPR023214|ensembl:ENSMUSG00000031862(gene)|refseq:NP_573487.2|entrezgene/locuslink:170759(identity) - - author-confidence:5.367722265756784 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:qTkuai8Jg5u+1FaxwfvnI+16mNU10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q9WTM5 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-2549911|ensembl:ENSMUSP00000103400|ensembl:ENSMUSP00000147502 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:ruvb2_mouse(display_long)|uniprotkb:Ruvbl2(gene name)|psi-mi:Ruvbl2(display_short)|uniprotkb:p47 protein(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) ensembl:ENSMUSG00000003868(gene)|ensembl:ENSMUST00000107771(transcript)|ensembl:ENSMUST00000211214(transcript)|go:"GO:0000492"(box C/D snoRNP assembly)|go:"GO:0000791"(euchromatin)|go:"GO:0000812"(Swr1 complex)|go:"GO:0034644"(cellular response to UV)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0043531"(ADP binding)|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0043968"(histone H2A acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051117"(ATPase binding)|go:"GO:0071169"(establishment of protein localization to chromatin)|go:"GO:0071339"(MLL1 complex)|go:"GO:0071392"(cellular response to estradiol stimulus)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:0097255"(R2TP complex)|go:"GO:0120293"(dynein axonemal particle)|go:"GO:0140585"(promoter-enhancer loop anchoring activity)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000979"(RNA polymerase II core promoter sequence-specific DNA binding)|go:"GO:0001094"(TFIID-class transcription factor complex binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008013"(beta-catenin binding)|go:"GO:0016573"(histone acetylation)|go:"GO:0017025"(TBP-class protein binding)|go:"GO:0031011"(Ino80 complex)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR010339(TIP49, C-terminal)|interpro:IPR027238|interpro:IPR027417|interpro:IPR037942|interpro:IPR041048|interpro:IPR042487|mint:Q9WTM5|go:"GO:0140603"(obsolete ATP hydrolysis activity)|refseq:NP_035434.1|refseq:XP_006540785.1|refseq:XP_006540786.1|entrezgene/locuslink:20174(identity) - - author-confidence:2.990259166504528 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:tHnjngaz5qWy9sPXagFLp3TRDtA10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P11370 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-11568232|uniprotkb:Q61529 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:env2_mouse(display_long)|uniprotkb:Env(gene name synonym)|uniprotkb:Fv4(gene name)|psi-mi:Fv4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) interpro:IPR008981(F-MuLV receptor-binding)|interpro:IPR018154|entrezgene/locuslink:14352(identity) - - author-confidence:5.522840175002989 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:DsVw164Ec5HjUzY80k5XF+/zW5c10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q9EQH3 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-775825|uniprotkb:Q61123|ensembl:ENSMUSP00000034131 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:vps35_mouse(display_long)|uniprotkb:Vesicle protein sorting 35(gene name synonym)|uniprotkb:Maternal-embryonic 3(gene name synonym)|uniprotkb:Vps35(gene name)|psi-mi:Vps35(display_short)|uniprotkb:Mem3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_075373.1|dip:DIP-32210N|ensembl:ENSMUSG00000031696(gene)|ensembl:ENSMUST00000034131(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006624"(vacuolar protein processing)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007040"(lysosome organization)|go:"GO:0007416"(synapse assembly)|go:"GO:0010008"(endosome membrane)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010821"(regulation of mitochondrion organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030904"(retromer complex)|go:"GO:0030906"(retromer, cargo-selective complex)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0031648"(protein destabilization)|go:"GO:0031748"(D1 dopamine receptor binding)|go:"GO:0032268"(regulation of cellular protein metabolic process)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032463"(negative regulation of protein homooligomerization)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043653"(mitochondrial fragmentation involved in apoptotic process)|go:"GO:0045056"(transcytosis)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050882"(voluntary musculoskeletal movement)|go:"GO:0060161"(positive regulation of dopamine receptor signaling pathway)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061357"(positive regulation of Wnt protein secretion)|go:"GO:0090141"(positive regulation of mitochondrial fission)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:0090326"(positive regulation of locomotion involved in locomotory behavior)|go:"GO:0097422"(tubular endosome)|go:"GO:0098793"(presynapse)|go:"GO:0098794"(postsynapse)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099003"(vesicle-mediated transport in synapse)|go:"GO:0099073"(mitochondrion-derived vesicle)|go:"GO:0099074"(mitochondrion to lysosome transport)|go:"GO:0099639"(neurotransmitter receptor transport, endosome to plasma membrane)|go:"GO:1901215"(negative regulation of neuron death)|go:"GO:1902823"(negative regulation of late endosome to lysosome transport)|go:"GO:1902950"(regulation of dendritic spine maintenance)|go:"GO:1903181"(positive regulation of dopamine biosynthetic process)|go:"GO:1903364"(positive regulation of cellular protein catabolic process)|go:"GO:1903828"(negative regulation of protein localization)|go:"GO:1905166"(negative regulation of lysosomal protein catabolic process)|go:"GO:2000331"(regulation of terminal button organization)|interpro:IPR005378(Vacuolar protein sorting-associated protein 35)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR042491|mint:Q9EQH3|rcsb pdb:6VAB|rcsb pdb:6VAC|reactome:R-MMU-3238698|entrezgene/locuslink:65114(identity) - - author-confidence:2.313202515444853 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:dK5TqSajxrGKjiNwRjeZCV519XE10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q68SA9 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-11568237|uniprotkb:B2RUI8|uniprotkb:E9QMY0|ensembl:ENSMUSP00000108682 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:ats7_mouse(display_long)|uniprotkb:COMPase(gene name synonym)|uniprotkb:Adamts7(gene name)|psi-mi:Adamts7(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) ensembl:ENSMUSG00000032363(gene)|ensembl:ENSMUST00000113059(transcript)|go:"GO:0004222"(metalloendopeptidase activity)|go:"GO:0005576"(extracellular region)|go:"GO:0006508"(proteolysis)|go:"GO:0008237"(metallopeptidase activity)|go:"GO:0009986"(cell surface)|go:"GO:0030198"(extracellular matrix organization)|go:"GO:0031012"(extracellular matrix)|go:"GO:0032331"(negative regulation of chondrocyte differentiation)|go:"GO:0046872"(metal ion binding)|go:"GO:0051603"(proteolysis involved in cellular protein catabolic process)|go:"GO:0071347"(cellular response to interleukin-1)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071773"(cellular response to BMP stimulus)|interpro:IPR000884(Thrombospondin, type I)|interpro:IPR001590(Peptidase M12B, ADAM/reprolysin)|interpro:IPR002870(Peptidase M12B, propeptide)|interpro:IPR006586(ADAM, cysteine-rich)|interpro:IPR010294(ADAM-TS Spacer 1)|interpro:IPR010909(PLAC)|interpro:IPR013273(Peptidase M12B, ADAM-TS)|interpro:IPR024079|interpro:IPR036383|interpro:IPR041645|reactome:R-MMU-5173214|refseq:NP_001313280.1|entrezgene/locuslink:108153(identity) - - author-confidence:49.23860133269311 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:+if+bciMQPQcOH2jBvM9EzneDaQ10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P35276 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) - - author-confidence:45.33155783720295 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q9DBG6 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-529941|uniprotkb:Q3TKY0|uniprotkb:Q91XH0|uniprotkb:A2ACG6|ensembl:ENSMUSP00000112081 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:rpn2_mouse(display_long)|uniprotkb:Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDa subunit(gene name synonym)|uniprotkb:Ribophorin-2(gene name synonym)|uniprotkb:Ribophorin II(gene name synonym)|uniprotkb:Rpn2(gene name)|psi-mi:Rpn2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_062616.2|ensembl:ENSMUSG00000027642(gene)|ensembl:ENSMUST00000116380(transcript)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005791"(rough endoplasmic reticulum)|go:"GO:0006487"(protein N-linked glycosylation)|go:"GO:0007568"(aging)|go:"GO:0008250"(oligosaccharyltransferase complex)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016604"(nuclear body)|go:"GO:0042493"|go:"GO:0043022"(ribosome binding)|interpro:IPR008814(Ribophorin II)|mint:Q9DBG6|rcsb pdb:5J6G|rcsb pdb:5J6H|entrezgene/locuslink:20014(identity) - - author-confidence:1.5003061302811935 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:FeAH2GGWVY8J5dSaAvfrsBSx3co10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q8BT14 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-11568001|uniprotkb:Q9Z1D0|uniprotkb:Q8CCR4|uniprotkb:Q9CV74|ensembl:ENSMUSP00000044137 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:cnot4_mouse(display_long)|uniprotkb:CCR4-associated factor 4(gene name synonym)|uniprotkb:E3 ubiquitin-protein ligase CNOT4(gene name synonym)|uniprotkb:Not4(gene name synonym)|uniprotkb:Potential transcriptional repressor NOT4Hp(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase CNOT4(gene name synonym)|uniprotkb:Cnot4(gene name)|psi-mi:Cnot4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_001157883.1|refseq:NP_001157885.1|refseq:NP_058573.3|refseq:XP_011239709.1|refseq:XP_011239710.1|ensembl:ENSMUSG00000038784(gene)|ensembl:ENSMUST00000044163(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0045652"(regulation of megakaryocyte differentiation)|go:"GO:0046872"(metal ion binding)|go:"GO:0051865"(protein autoubiquitination)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR034261|interpro:IPR035979|interpro:IPR039515|interpro:IPR039780|rcsb pdb:2CPI|reactome:R-MMU-429947|reactome:R-MMU-6804115|entrezgene/locuslink:53621(identity) - - author-confidence:1.7184351119829921 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:UoBMptSCToNiGE27sDEzVZFR3ss10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q78IK2 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-2934077|ensembl:ENSMUSP00000093713|ensembl:ENSMUSP00000157712|ensembl:ENSMUSP00000158514|ensembl:ENSMUSP00000158561|uniprotkb:Q9ER48 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:atpmk_mouse(display_long)|uniprotkb:Atp5mk(gene name)|psi-mi:Atp5mk(display_short)|uniprotkb:ATP synthase membrane subunit DAPIT, mitochondrial(gene name synonym)|uniprotkb:Atp5md(gene name synonym)|uniprotkb:Dapit(gene name synonym)|uniprotkb:Diabetes-associated protein in insulin-sensitive tissues(gene name synonym)|uniprotkb:Up-regulated during skeletal muscle growth protein 5(gene name synonym)|uniprotkb:Usmg5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) ensembl:ENSMUSG00000071528(gene)|ensembl:ENSMUST00000096014(transcript)|ensembl:ENSMUST00000235771(transcript)|ensembl:ENSMUST00000236170(transcript)|ensembl:ENSMUST00000237720(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005753"(mitochondrial proton-transporting ATP synthase complex)|go:"GO:0016021"(integral component of membrane)|interpro:IPR009125(DAPIT)|refseq:NP_075700.2|entrezgene/locuslink:66477(identity) - - author-confidence:1.1027830187837255 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:X/LBFKOsDisU3OvbILnMxEfWtNY10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q8VDN2 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-444536|ensembl:ENSMUSP00000039657|uniprotkb:Q91Z09 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:at1a1_mouse(display_long)|uniprotkb:Sodium pump subunit alpha-1(gene name synonym)|uniprotkb:Atp1a1(gene name)|psi-mi:Atp1a1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_659149.1|go:"GO:0016324"(apical plasma membrane)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0016791"(phosphatase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030007"(cellular potassium ion homeostasis)|go:"GO:0030315"(T-tubule)|go:"GO:0030424"(axon)|go:"GO:0030506"(ankyrin binding)|go:"GO:0030955"(potassium ion binding)|go:"GO:0031090"(organelle membrane)|go:"GO:0031402"(sodium ion binding)|go:"GO:0031947"(negative regulation of glucocorticoid biosynthetic process)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036126"(sperm flagellum)|go:"GO:0036376"(sodium ion export across plasma membrane)|go:"GO:0042383"(sarcolemma)|go:"GO:0042470"(melanosome)|go:"GO:0042493"|go:"GO:0043209"(myelin sheath)|go:"GO:0043531"(ADP binding)|go:"GO:0043548"(phosphatidylinositol 3-kinase binding)|go:"GO:0045121"(membrane raft)|go:"GO:0045822"(negative regulation of heart contraction)|go:"GO:0045823"(positive regulation of heart contraction)|go:"GO:0045989"(positive regulation of striated muscle contraction)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051087"(chaperone binding)|go:"GO:0055085"(transmembrane transport)|go:"GO:0060081"(membrane hyperpolarization)|go:"GO:0071260"(cellular response to mechanical stimulus)|go:"GO:0071383"(cellular response to steroid hormone stimulus)|go:"GO:0086004"(regulation of cardiac muscle cell contraction)|go:"GO:0086009"(membrane repolarization)|go:"GO:1902600"(proton transmembrane transport)|go:"GO:1990239"(steroid hormone binding)|go:"GO:1990573"(potassium ion import across plasma membrane)|interpro:IPR001757(ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter)|interpro:IPR004014(ATPase, P-type cation-transporter, N-terminal)|interpro:IPR005775(ATPase, P-type cation exchange, alpha subunit, eukaryotic)|interpro:IPR006068(ATPase, P-type cation-transporter, C-terminal)|interpro:IPR008250(E1-E2 ATPase-associated region)|interpro:IPR018303|interpro:IPR023214|interpro:IPR023298|interpro:IPR023299|interpro:IPR036412|interpro:IPR044492|mint:Q8VDN2|reactome:R-MMU-5578775|reactome:R-MMU-936837|ensembl:ENSMUSG00000033161(gene)|ensembl:ENSMUST00000036493(transcript)|go:"GO:0002026"(regulation of the force of heart contraction)|go:"GO:0002028"(regulation of sodium ion transport)|go:"GO:0005391"("P-type sodium:potassium-exchanging transporter activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005768"(endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0005890"("sodium:potassium-exchanging ATPase complex")|go:"GO:0005901"(caveola)|go:"GO:0006813"(potassium ion transport)|go:"GO:0006814"(sodium ion transport)|go:"GO:0006883"(cellular sodium ion homeostasis)|go:"GO:0008217"(regulation of blood pressure)|go:"GO:0014069"(postsynaptic density)|go:"GO:0014704"(intercalated disc)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016323"(basolateral plasma membrane)|dip:DIP-31885N|entrezgene/locuslink:11928(identity) - - author-confidence:76.73534814063785 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:gz0ThqOMMsrl71IqGW0z8wbiqL410090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q6PHN9 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-1373353|ensembl:ENSMUSP00000031492 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) - - author-confidence:1.2991348026396818 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P10404 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-11568253|uniprotkb:Q811N4|uniprotkb:Q80SY1|uniprotkb:Q78N71|uniprotkb:Q78N73|uniprotkb:Q811M9|uniprotkb:Q80SW7|uniprotkb:Q80SY0|uniprotkb:Q80SW8|uniprotkb:Q78N94 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:env1_mouse(display_long) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) interpro:IPR008981(F-MuLV receptor-binding)|interpro:IPR018154|rcsb pdb:4JGS|go:"GO:0005886"(plasma membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0046872"(metal ion binding)|entrezgene/locuslink:101056102(identity) - - author-confidence:5.522840175002989 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:QCM3xI1GLK6lk85nymjWDhJ3uPk10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q9D518 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-11568244|uniprotkb:A2AR82|ensembl:ENSMUSP00000106076|ensembl:ENSMUSP00000136349 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:f227b_mouse(display_long)|uniprotkb:Fam227b(gene name)|psi-mi:Fam227b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_083731.2|ensembl:ENSMUSG00000027209(gene)|ensembl:ENSMUST00000110446(transcript)|ensembl:ENSMUST00000178118(transcript)|interpro:IPR029417|mint:Q9D518|entrezgene/locuslink:75823(identity) - - author-confidence:269.70791779643315 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:blnIazwCtDkSf2WzxULzu27j4ik10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q9CRT8 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-644629|uniprotkb:Q52KI1|ensembl:ENSMUSP00000043488 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:xpot_mouse(display_long)|uniprotkb:tRNA exportin(gene name synonym)|uniprotkb:"Exportin(tRNA)"(gene name synonym)|uniprotkb:Xpot(gene name)|psi-mi:Xpot(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) ensembl:ENSMUSG00000034667(gene)|ensembl:ENSMUST00000039810(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0005643"(nuclear pore)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0016363"(nuclear matrix)|go:"GO:0031267"(small GTPase binding)|go:"GO:0071528"(tRNA re-export from nucleus)|interpro:IPR001494(Importin-beta, N-terminal)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR013598(Exportin-1/Importin-beta-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040017|mint:Q9CRT8|entrezgene/locuslink:73192(identity) - - author-confidence:1.917999925029319 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:sxoS4tNMBaRRDwVJM5HlK1c2avE10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:Q61753 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-1633989|uniprotkb:Q3TEE5|uniprotkb:Q75SV9|uniprotkb:Q8C603|ensembl:ENSMUSP00000064755 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:sera_mouse(display_long)|uniprotkb:Phgdh(gene name)|psi-mi:Phgdh(display_short)|uniprotkb:A10(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_058662.2|ensembl:ENSMUSG00000053398(gene)|ensembl:ENSMUST00000065793(transcript)|go:"GO:0004617"(phosphoglycerate dehydrogenase activity)|go:"GO:0006541"(glutamine metabolic process)|go:"GO:0006544"(glycine metabolic process)|go:"GO:0006563"(L-serine metabolic process)|go:"GO:0006564"(L-serine biosynthetic process)|go:"GO:0006566"(threonine metabolic process)|go:"GO:0009448"(gamma-aminobutyric acid metabolic process)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0019530"(taurine metabolic process)|go:"GO:0021510"(spinal cord development)|go:"GO:0021782"(glial cell development)|go:"GO:0021915"(neural tube development)|go:"GO:0022008"(neurogenesis)|go:"GO:0031175"(neuron projection development)|go:"GO:0043209"(myelin sheath)|go:"GO:0051287"(NAD binding)|go:"GO:0070314"(G1 to G0 transition)|interpro:IPR006139(D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region)|interpro:IPR006140(D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding)|interpro:IPR006236(D-3-phosphoglycerate dehydrogenase)|interpro:IPR029009|interpro:IPR029752|interpro:IPR029753|interpro:IPR036291|mint:Q61753|reactome:R-MMU-977347|entrezgene/locuslink:236539(identity) - - author-confidence:1.2905667247986947 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:66i2iIx5qSIN6BkqSPF14+UqDIA10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P46460 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-398006|uniprotkb:A2A646|uniprotkb:Q8BQ65|uniprotkb:Q8C3R2|uniprotkb:Q8CCT9|uniprotkb:Q8CEF0|uniprotkb:Q923C6|ensembl:ENSMUSP00000099364 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:nsf_mouse(display_long)|uniprotkb:Nsf(gene name)|psi-mi:Nsf(display_short)|uniprotkb:Skd2(gene name synonym)|uniprotkb:N-ethylmaleimide-sensitive fusion protein(gene name synonym)|uniprotkb:Vesicular-fusion protein NSF(gene name synonym)|uniprotkb:"Suppressor of K(+) transport growth defect 2"(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_032766.2|ensembl:ENSMUSG00000034187(gene)|ensembl:ENSMUST00000103075(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0001921"(positive regulation of receptor recycling)|go:"GO:0002090"(regulation of receptor internalization)|go:"GO:0005524"(ATP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006813"(potassium ion transport)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0017075"(syntaxin-1 binding)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030165"(PDZ domain binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031748"(D1 dopamine receptor binding)|go:"GO:0032984"(protein-containing complex disassembly)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0035494"(SNARE complex disassembly)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0043008"(ATP-dependent protein binding)|go:"GO:0043198"(dendritic shaft)|go:"GO:0043209"(myelin sheath)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0048211"(Golgi vesicle docking)|go:"GO:0140545"(protein disaggregase activity)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027417|interpro:IPR029067|interpro:IPR039812|interpro:IPR041569|mint:P46460|reactome:R-MMU-204005|reactome:R-MMU-416993|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-6811438|reactome:R-MMU-6811440|entrezgene/locuslink:18195(identity) - - author-confidence:308.6321599231729 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:mqNfvBVWEdD4caFZug82c88vwE410090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P07901 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-78930|ensembl:ENSMUSP00000021698|ensembl:ENSMUSP00000091921 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:hs90a_mouse(display_long)|uniprotkb:Hsp90aa1(gene name)|psi-mi:Hsp90aa1(display_short)|uniprotkb:Hsp86(gene name synonym)|uniprotkb:Hsp86-1(gene name synonym)|uniprotkb:Hspca(gene name synonym)|uniprotkb:Heat shock 86 kDa(gene name synonym)|uniprotkb:Tumor-specific transplantation 86 kDa antigen(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_034610.1|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045585"(positive regulation of cytotoxic T cell differentiation)|go:"GO:0045793"(positive regulation of cell size)|go:"GO:0046677"(response to antibiotic)|go:"GO:0048156"(tau protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048675"(axon extension)|go:"GO:0050821"(protein stabilization)|go:"GO:0051020"(GTPase binding)|go:"GO:0051022"(Rho GDP-dissociation inhibitor binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070182"(DNA polymerase binding)|go:"GO:0097110"(scaffold protein binding)|go:"GO:0097226"(sperm mitochondrial sheath)|go:"GO:0097524"(sperm plasma membrane)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0098586"(cellular response to virus)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902949"(positive regulation of tau-protein kinase activity)|go:"GO:1903364"(positive regulation of cellular protein catabolic process)|go:"GO:1903827"|go:"GO:1905323"(telomerase holoenzyme complex assembly)|go:"GO:1990782"(protein tyrosine kinase binding)|interpro:IPR001404(Heat shock protein Hsp90)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR019805|interpro:IPR020568|interpro:IPR020575|interpro:IPR036890|interpro:IPR037196|mint:P07901|rcsb pdb:5H22|reactome:R-MMU-1227986|reactome:R-MMU-1474151|reactome:R-MMU-168928|reactome:R-MMU-2029482|reactome:R-MMU-203615|reactome:R-MMU-2565942|reactome:R-MMU-3371497|reactome:R-MMU-3371511|reactome:R-MMU-3371568|reactome:R-MMU-3371571|reactome:R-MMU-380259|reactome:R-MMU-380270|reactome:R-MMU-380284|reactome:R-MMU-380320|reactome:R-MMU-399954|reactome:R-MMU-4420097|reactome:R-MMU-5218920|reactome:R-MMU-5620912|reactome:R-MMU-5675482|reactome:R-MMU-6798695|reactome:R-MMU-8852276|reactome:R-MMU-8854518|reactome:R-MMU-8863795|reactome:R-MMU-8939211|reactome:R-MMU-9009391|reactome:R-MMU-9013418|reactome:R-MMU-9018519|reactome:R-MMU-9652282|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031526"(brush border membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032273"(positive regulation of protein polymerization)|go:"GO:0032564"(dATP binding)|go:"GO:0032728"(positive regulation of interferon-beta production)|ensembl:ENSMUSG00000021270(gene)|ensembl:ENSMUST00000021698(transcript)|ensembl:ENSMUST00000094361(transcript)|go:"GO:0001764"(neuron migration)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0002134"(UTP binding)|go:"GO:0002135"(CTP binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0002230"(positive regulation of defense response to virus by host)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006809"(nitric oxide biosynthetic process)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0007004"(telomere maintenance via telomerase)|go:"GO:0009408"(response to heat)|go:"GO:0009409"(response to cold)|go:"GO:0009986"(cell surface)|go:"GO:0010592"(positive regulation of lamellipodium assembly)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017098"(sulfonylurea receptor binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0021955"(central nervous system neuron axonogenesis)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030235"(nitric-oxide synthase regulator activity)|go:"GO:0030911"(TPR domain binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034605"(cellular response to heat)|go:"GO:0036126"(sperm flagellum)|go:"GO:0042026"(protein refolding)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0042470"(melanosome)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043209"(myelin sheath)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0044294"(dendritic growth cone)|go:"GO:0044295"(axonal growth cone)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045040"(protein insertion into mitochondrial outer membrane)|dip:DIP-30975N|entrezgene/locuslink:15519(identity) - - author-confidence:1.574027300038021 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:t9XAeXdXezYOtJX0wp3IY9/ZMkQ10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P57784 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-6877081|ensembl:ENSMUSP00000117947|uniprotkb:Q3U7R8|uniprotkb:Q8K2W4|uniprotkb:Q91YW1|uniprotkb:Q9JKQ3 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:ru2a_mouse(display_long)|uniprotkb:Snrpa1(gene name)|psi-mi:Snrpa1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) ensembl:ENSMUSG00000030512(gene)|ensembl:ENSMUST00000153609(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005686"(U2 snRNP)|go:"GO:0007283"(spermatogenesis)|go:"GO:0016604"(nuclear body)|go:"GO:0016607"(nuclear speck)|go:"GO:0030620"(U2 snRNA binding)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR003603(U2A'/phosphoprotein 32 family A, C-terminal)|interpro:IPR032675|interpro:IPR044640|mint:P57784|reactome:R-MMU-72163|refseq:NP_067311.4|entrezgene/locuslink:68981(identity) - - author-confidence:1.1770396934056144 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:AMQnbw028+3/guP4MfrfDJCFu6s10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:O35129 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-445002|uniprotkb:O89075|uniprotkb:Q61336|ensembl:ENSMUSP00000004375 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:phb2_mouse(display_long)|uniprotkb:B-cell receptor-associated protein BAP37(gene name synonym)|uniprotkb:Repressor of estrogen receptor activity(gene name synonym)|uniprotkb:Phb2(gene name)|psi-mi:Phb2(display_short)|uniprotkb:Bap(gene name synonym)|uniprotkb:Bcap37(gene name synonym)|uniprotkb:Rea(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_031557.2|go:"GO:0046625"(sphingolipid binding)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0050821"(protein stabilization)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0060744"(mammary gland branching involved in thelarche)|go:"GO:0060749"(mammary gland alveolus development)|go:"GO:0060762"(regulation of branching involved in mammary gland duct morphogenesis)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0071300"(cellular response to retinoic acid)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071944"(cell periphery)|go:"GO:0098800"(inner mitochondrial membrane protein complex)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0140374"(antiviral innate immune response)|go:"GO:1900208"(regulation of cardiolipin metabolic process)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1904959"(regulation of cytochrome-c oxidase activity)|go:"GO:1990051"(activation of protein kinase C activity)|interpro:IPR000163(Prohibitin)|interpro:IPR001107(Band 7 protein)|interpro:IPR036013|mint:O35129|reactome:R-MMU-8949664|go:"GO:1902808"(positive regulation of cell cycle G1/S phase transition)|ensembl:ENSMUSG00000004264(gene)|ensembl:ENSMUST00000004375(transcript)|go:"GO:0000423"(mitophagy)|go:"GO:0002639"(positive regulation of immunoglobulin production)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0007202"(activation of phospholipase C activity)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009611"(response to wounding)|go:"GO:0009986"(cell surface)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016363"(nuclear matrix)|go:"GO:0023035"(CD40 signaling pathway)|go:"GO:0030424"(axon)|go:"GO:0031536"(positive regulation of exit from mitosis)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0033218"(amide binding)|go:"GO:0033600"(negative regulation of mammary gland epithelial cell proliferation)|go:"GO:0035632"(mitochondrial prohibitin complex)|go:"GO:0039520"(induction by virus of host autophagy)|go:"GO:0039529"(RIG-I signaling pathway)|go:"GO:0042113"(B cell activation)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0016477"(cell migration)|entrezgene/locuslink:12034(identity) - - author-confidence:78.79864838572058 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:h4pib54mBeQgOKCe/hib58LM26w10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P63011 uniprotkb:P62823 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568224|imex:IM-24977-29 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) - - author-confidence:3.13073994277238 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 intact-crc:A2E88C3627418DBF|rigid:guAGcuGAS9HzVGYfwqdfpp6eg5w false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P97950 uniprotkb:Q8R3Y8 intact:EBI-11568468|ensembl:ENSMUSP00000033430 intact:EBI-8317484|intact:MINT-4113795|uniprotkb:Q8C0B1|uniprotkb:Q8CI76|uniprotkb:Q8BJC9|ensembl:ENSMUSP00000061234 psi-mi:rb33a_mouse(display_long)|uniprotkb:Rabs10(gene name synonym)|uniprotkb:Small GTP-binding protein S10(gene name synonym)|uniprotkb:Rab33a(gene name)|psi-mi:Rab33a(display_short) psi-mi:i2bp1_mouse(display_long)|uniprotkb:Irf2bp1(gene name)|psi-mi:Irf2bp1(display_short)|uniprotkb:Probable E3 ubiquitin-protein ligase IRF2BP1(gene name synonym)|uniprotkb:Probable RING-type E3 ubiquitin transferase IRF2BP1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568466|imex:IM-24977-30 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_035358.1|ensembl:ENSMUSG00000031104(gene)|ensembl:ENSMUST00000033430(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0032482"(Rab protein signal transduction)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19337(identity) refseq:NP_848872.2|ensembl:ENSMUSG00000044030(gene)|ensembl:ENSMUST00000053713(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR018957|interpro:IPR022750|interpro:IPR044882|mint:Q8R3Y8|entrezgene/locuslink:272359(identity) - - comment:mint|author-confidence:1.172755654485121 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:cGjViP75yHDHizE73L6ff3YBOBc10090 rogid:KQRGqXRhCWTFiw2mTZGjLiJ2s9M10090 intact-crc:BAA2483A0191259C|rigid:MbQiK1Sf3MhiPSm8Kci2upIWFzE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P97950 uniprotkb:Q6ZWX6 intact:EBI-11568468|ensembl:ENSMUSP00000033430 intact:EBI-1202234|uniprotkb:Q3TIQ0|ensembl:ENSMUSP00000071214 psi-mi:rb33a_mouse(display_long)|uniprotkb:Rabs10(gene name synonym)|uniprotkb:Small GTP-binding protein S10(gene name synonym)|uniprotkb:Rab33a(gene name)|psi-mi:Rab33a(display_short) psi-mi:if2a_mouse(display_long)|uniprotkb:Eif2s1(gene name)|psi-mi:Eif2s1(display_short)|uniprotkb:Eif2a(gene name synonym)|uniprotkb:Eukaryotic translation initiation factor 2 subunit alpha(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568466|imex:IM-24977-30 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_035358.1|ensembl:ENSMUSG00000031104(gene)|ensembl:ENSMUST00000033430(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0032482"(Rab protein signal transduction)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19337(identity) refseq:NP_080390.1|go:"GO:0006412"(translation)|go:"GO:0007568"(aging)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0032057"(negative regulation of translational initiation in response to stress)|go:"GO:0033290"(eukaryotic 48S preinitiation complex)|go:"GO:0034063"(stress granule assembly)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0034605"(cellular response to heat)|go:"GO:0034644"(cellular response to UV)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0036499"(PERK-mediated unfolded protein response)|go:"GO:0043022"(ribosome binding)|go:"GO:0043558"(regulation of translational initiation in response to stress)|go:"GO:0043614"(multi-eIF complex)|go:"GO:0044207"(translation initiation ternary complex)|go:"GO:0045202"(synapse)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0097451"(glial limiting end-foot)|go:"GO:1901216"(positive regulation of neuron death)|go:"GO:1905098"(negative regulation of guanyl-nucleotide exchange factor activity)|go:"GO:1990737"(response to manganese-induced endoplasmic reticulum stress)|go:"GO:2000676"(positive regulation of type B pancreatic cell apoptotic process)|interpro:IPR003029(S1, RNA binding)|interpro:IPR011488(Eukaryotic translation initiation factor 2, alpha subunit)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR022967|interpro:IPR024054|interpro:IPR024055|interpro:IPR044126|reactome:R-MMU-156827|reactome:R-MMU-381042|reactome:R-MMU-382556|reactome:R-MMU-72649|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-72731|go:"GO:0005851"(eukaryotic translation initiation factor 2B complex)|ensembl:ENSMUSG00000021116(gene)|ensembl:ENSMUST00000071230(transcript)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005850"(eukaryotic translation initiation factor 2 complex)|entrezgene/locuslink:13665(identity) - - author-confidence:1.187214285841787 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:cGjViP75yHDHizE73L6ff3YBOBc10090 rogid:FKeyVi3QK42ZWZl8m/PyPoleIDQ10090 intact-crc:BAA2483A0191259C|rigid:MbQiK1Sf3MhiPSm8Kci2upIWFzE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P97950 uniprotkb:Q6ZQ08 intact:EBI-11568468|ensembl:ENSMUSP00000033430 intact:EBI-682479|intact:EBI-2104684|uniprotkb:B2RY28|uniprotkb:Q3UPB7|uniprotkb:Q8BSB4|uniprotkb:Q8BXB2|uniprotkb:Q8C0H2|uniprotkb:Q8K3D8 psi-mi:rb33a_mouse(display_long)|uniprotkb:Rabs10(gene name synonym)|uniprotkb:Small GTP-binding protein S10(gene name synonym)|uniprotkb:Rab33a(gene name)|psi-mi:Rab33a(display_short) psi-mi:cnot1_mouse(display_long)|uniprotkb:Cnot1(gene name)|psi-mi:Cnot1(display_short)|uniprotkb:Kiaa1007(gene name synonym)|uniprotkb:CCR4-associated factor 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568466|imex:IM-24977-30 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_035358.1|ensembl:ENSMUSG00000031104(gene)|ensembl:ENSMUST00000033430(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0032482"(Rab protein signal transduction)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19337(identity) refseq:NP_835179.1|refseq:XP_006530937.1|dip:DIP-46845N|mint:Q6ZQ08|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000288"(nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:0000932"(P-body)|go:"GO:0001829"(trophectodermal cell differentiation)|go:"GO:0004535"("poly(A)-specific ribonuclease activity")|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0010606"(positive regulation of cytoplasmic mRNA processing body assembly)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0030331"(estrogen receptor binding)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0035195"(gene silencing by miRNA)|go:"GO:0042974"(retinoic acid receptor binding)|go:"GO:0048387"(negative regulation of retinoic acid receptor signaling pathway)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0060213"("positive regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0061014"(positive regulation of mRNA catabolic process)|go:"GO:0070016"(armadillo repeat domain binding)|go:"GO:1900153"(positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:2000036"(regulation of stem cell population maintenance)|interpro:IPR007196(CCR4-Not complex component, Not1)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR024557|interpro:IPR032191|interpro:IPR032193|interpro:IPR032194|interpro:IPR038535|interpro:IPR040398|reactome:R-MMU-429947|reactome:R-MMU-6804115|entrezgene/locuslink:234594(identity) - - comment:AfCS Y2H protein 39306. Translated from nucleotide sequence.|author-confidence:2.1834318364782344 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:cGjViP75yHDHizE73L6ff3YBOBc10090 rogid:2Q4quoSuPlUbD4QkiAkc9Hr9avI10090 intact-crc:BAA2483A0191259C|rigid:MbQiK1Sf3MhiPSm8Kci2upIWFzE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P97950 uniprotkb:Q3URQ0 intact:EBI-11568468|ensembl:ENSMUSP00000033430 intact:EBI-6910284|ensembl:ENSMUSP00000030030|ensembl:ENSMUSP00000132498 psi-mi:rb33a_mouse(display_long)|uniprotkb:Rabs10(gene name synonym)|uniprotkb:Small GTP-binding protein S10(gene name synonym)|uniprotkb:Rab33a(gene name)|psi-mi:Rab33a(display_short) psi-mi:tex10_mouse(display_long)|uniprotkb:Tex10(gene name)|psi-mi:Tex10(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568466|imex:IM-24977-30 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_035358.1|ensembl:ENSMUSG00000031104(gene)|ensembl:ENSMUST00000033430(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0032482"(Rab protein signal transduction)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19337(identity) refseq:XP_006538018.1|refseq:XP_006538019.1|ensembl:ENSMUSG00000028345(gene)|ensembl:ENSMUST00000030030(transcript)|ensembl:ENSMUST00000164866(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0071339"(MLL1 complex)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR024679|interpro:IPR037947|reactome:R-MMU-6791226|refseq:NP_758508.2|entrezgene/locuslink:269536(identity) - - author-confidence:1.743425339019205 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:cGjViP75yHDHizE73L6ff3YBOBc10090 rogid:iGocOH1GUrHKJQ3umzAunS1LfLY10090 intact-crc:BAA2483A0191259C|rigid:MbQiK1Sf3MhiPSm8Kci2upIWFzE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P97950 uniprotkb:P57784 intact:EBI-11568468|ensembl:ENSMUSP00000033430 intact:EBI-6877081|ensembl:ENSMUSP00000117947|uniprotkb:Q3U7R8|uniprotkb:Q8K2W4|uniprotkb:Q91YW1|uniprotkb:Q9JKQ3 psi-mi:rb33a_mouse(display_long)|uniprotkb:Rabs10(gene name synonym)|uniprotkb:Small GTP-binding protein S10(gene name synonym)|uniprotkb:Rab33a(gene name)|psi-mi:Rab33a(display_short) psi-mi:ru2a_mouse(display_long)|uniprotkb:Snrpa1(gene name)|psi-mi:Snrpa1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568466|imex:IM-24977-30 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_035358.1|ensembl:ENSMUSG00000031104(gene)|ensembl:ENSMUST00000033430(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0032482"(Rab protein signal transduction)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19337(identity) ensembl:ENSMUSG00000030512(gene)|ensembl:ENSMUST00000153609(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005686"(U2 snRNP)|go:"GO:0007283"(spermatogenesis)|go:"GO:0016604"(nuclear body)|go:"GO:0016607"(nuclear speck)|go:"GO:0030620"(U2 snRNA binding)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR003603(U2A'/phosphoprotein 32 family A, C-terminal)|interpro:IPR032675|interpro:IPR044640|mint:P57784|reactome:R-MMU-72163|refseq:NP_067311.4|entrezgene/locuslink:68981(identity) - - author-confidence:1.460857271888315 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:cGjViP75yHDHizE73L6ff3YBOBc10090 rogid:AMQnbw028+3/guP4MfrfDJCFu6s10090 intact-crc:BAA2483A0191259C|rigid:MbQiK1Sf3MhiPSm8Kci2upIWFzE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P97950 uniprotkb:Q07105 intact:EBI-11568468|ensembl:ENSMUSP00000033430 intact:EBI-11568472|ensembl:ENSMUSP00000018382 psi-mi:rb33a_mouse(display_long)|uniprotkb:Rabs10(gene name synonym)|uniprotkb:Small GTP-binding protein S10(gene name synonym)|uniprotkb:Rab33a(gene name)|psi-mi:Rab33a(display_short) psi-mi:gdf9_mouse(display_long)|uniprotkb:Gdf-9(gene name synonym)|uniprotkb:Gdf9(gene name)|psi-mi:Gdf9(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568466|imex:IM-24977-30 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_035358.1|ensembl:ENSMUSG00000031104(gene)|ensembl:ENSMUST00000033430(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0032482"(Rab protein signal transduction)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19337(identity) refseq:NP_032136.2|ensembl:ENSMUSG00000018238(gene)|ensembl:ENSMUST00000018382(transcript)|go:"GO:0001555"(oocyte growth)|go:"GO:0005125"(cytokine activity)|go:"GO:0005615"(extracellular space)|go:"GO:0005737"(cytoplasm)|go:"GO:0008083"(growth factor activity)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0010862"(positive regulation of pathway-restricted SMAD protein phosphorylation)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0030509"(BMP signaling pathway)|go:"GO:0060395"(SMAD protein signal transduction)|go:"GO:0070698"(type I activin receptor binding)|go:"GO:2000870"(regulation of progesterone secretion)|interpro:IPR001839(Transforming growth factor beta)|interpro:IPR015615(Transforming growth factor-beta-related)|interpro:IPR015617(Growth differentiation factor-9)|interpro:IPR017948|interpro:IPR029034|entrezgene/locuslink:14566(identity) - - author-confidence:41.21120490379655 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:cGjViP75yHDHizE73L6ff3YBOBc10090 rogid:afcsLZ+7VeuzlXsoFz0/xNblHdg10090 intact-crc:BAA2483A0191259C|rigid:MbQiK1Sf3MhiPSm8Kci2upIWFzE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P97950 uniprotkb:Q9DB54 intact:EBI-11568468|ensembl:ENSMUSP00000033430 intact:EBI-11567974|uniprotkb:Q6PFA4|uniprotkb:Q3UD74|ensembl:ENSMUSP00000031419 psi-mi:rb33a_mouse(display_long)|uniprotkb:Rabs10(gene name synonym)|uniprotkb:Small GTP-binding protein S10(gene name synonym)|uniprotkb:Rab33a(gene name)|psi-mi:Rab33a(display_short) psi-mi:f216a_mouse(display_long)|uniprotkb:Fam216a(gene name)|psi-mi:Fam216a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568466|imex:IM-24977-30 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_035358.1|ensembl:ENSMUSG00000031104(gene)|ensembl:ENSMUST00000033430(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0032482"(Rab protein signal transduction)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19337(identity) refseq:NP_081159.1|ensembl:ENSMUSG00000029463(gene)|ensembl:ENSMUST00000031419(transcript)|interpro:IPR029373|entrezgene/locuslink:68948(identity) - - author-confidence:1.116170640410268 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:cGjViP75yHDHizE73L6ff3YBOBc10090 rogid:esvXrLMS1/ukGuV5x3AuEOI+u0s10090 intact-crc:BAA2483A0191259C|rigid:MbQiK1Sf3MhiPSm8Kci2upIWFzE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q6PHN9 uniprotkb:Q9CZ44 intact:EBI-1373353|ensembl:ENSMUSP00000031492 intact:EBI-7961368|uniprotkb:Q8BYL3|uniprotkb:Q80Y15|intact:MINT-1869876|uniprotkb:A2AT03|ensembl:ENSMUSP00000028949 psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:nsf1c_mouse(display_long)|uniprotkb:Nsfl1c(gene name)|psi-mi:Nsfl1c(display_short)|uniprotkb:p97 cofactor p47(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568540|imex:IM-24977-32 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) refseq:NP_938085.1|refseq:NP_001278003.1|ensembl:ENSMUSG00000027455(gene)|ensembl:ENSMUST00000028949(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000132"(establishment of mitotic spindle orientation)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0005795"(Golgi stack)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0007030"(Golgi organization)|go:"GO:0031468"(nuclear membrane reassembly)|go:"GO:0031616"(spindle pole centrosome)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0045111"(intermediate filament cytoskeleton)|go:"GO:0046604"(positive regulation of mitotic centrosome separation)|go:"GO:0051117"(ATPase binding)|go:"GO:0061025"(membrane fusion)|go:"GO:1904780"(negative regulation of protein localization to centrosome)|go:"GO:1990730"(VCP-NSFL1C complex)|interpro:IPR001012(UBX)|interpro:IPR009060(UBA-like)|interpro:IPR012989(SEP)|interpro:IPR029071|interpro:IPR036241|mint:Q9CZ44|reactome:R-MMU-9013407|entrezgene/locuslink:386649(identity) - - comment:mint|comment:homomint|function:"Reduces the ATPase activity of VCP. Necessary for the fragmentation of Golgi stacks during mitosis and for VCP-mediated reassembly of Golgi stacks after mitosis. May play a role in VCP-mediated formation of transitional endoplasmic reticulum (tER)"|author-confidence:1.5734917951729592 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 rogid:b61FAzDFIfQboD05Rm+7tvW2DQY10090 intact-crc:444DCB9653515207|rigid:asc00zoQedFeXbLohAmFVj1vwkk false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q6PHN9 uniprotkb:P52480 intact:EBI-1373353|ensembl:ENSMUSP00000031492 intact:EBI-647785|uniprotkb:Q3TBV8|uniprotkb:Q3TBW5|uniprotkb:Q3TC59|uniprotkb:Q3U1X3|uniprotkb:Q3U5P6|uniprotkb:Q4VC20|uniprotkb:Q64484|uniprotkb:Q91YI8|uniprotkb:Q9CWB1|ensembl:ENSMUSP00000034834 psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:kpym_mouse(display_long)|uniprotkb:Pkm(gene name)|psi-mi:Pkm(display_short)|uniprotkb:Pk3(gene name synonym)|uniprotkb:Pkm2(gene name synonym)|uniprotkb:Pykm(gene name synonym)|uniprotkb:Pyruvate kinase muscle isozyme(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568540|imex:IM-24977-32 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) refseq:NP_035229.2|refseq:XP_006510918.1|refseq:NP_001240812.1|refseq:XP_011240975.1|dip:DIP-40536N|ensembl:ENSMUSG00000032294(gene)|ensembl:ENSMUST00000034834(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0001889"(liver development)|go:"GO:0003729"(mRNA binding)|go:"GO:0004743"(pyruvate kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005791"(rough endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005929"(cilium)|go:"GO:0006006"(glucose metabolic process)|go:"GO:0006096"(glycolytic process)|go:"GO:0006754"(ATP biosynthetic process)|go:"GO:0012501"(programmed cell death)|go:"GO:0016301"(kinase activity)|go:"GO:0030955"(potassium ion binding)|go:"GO:0031100"(animal organ regeneration)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0042802"(identical protein binding)|go:"GO:0042866"(pyruvate biosynthetic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0043403"(skeletal muscle tissue regeneration)|go:"GO:0043531"(ADP binding)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070324"(thyroid hormone binding)|go:"GO:1902912"(pyruvate kinase complex)|go:"GO:1903672"(positive regulation of sprouting angiogenesis)|go:"GO:2000767"(positive regulation of cytoplasmic translation)|interpro:IPR001697(Pyruvate kinase)|interpro:IPR011037(Pyruvate kinase, beta-barrel-like)|interpro:IPR015793(Pyruvate kinase, barrel)|interpro:IPR015795(Pyruvate kinase, C-terminal-like)|interpro:IPR015806(Pyruvate kinase, beta-barrel)|interpro:IPR015813(Pyruvate/Phosphoenolpyruvate kinase, catalytic core)|interpro:IPR018209|interpro:IPR036918|interpro:IPR040442|mint:P52480|reactome:R-MMU-6798695|reactome:R-MMU-70171|entrezgene/locuslink:18746(identity) - - author-confidence:4.832038899073398 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 rogid:SWQx3aPATcnlExhyy8afjcrB+xo10090 intact-crc:444DCB9653515207|rigid:asc00zoQedFeXbLohAmFVj1vwkk false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q6PHN9 uniprotkb:P61027 intact:EBI-1373353|ensembl:ENSMUSP00000031492 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568540|imex:IM-24977-32 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) - - author-confidence:1.1104585885162765 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 intact-crc:444DCB9653515207|rigid:asc00zoQedFeXbLohAmFVj1vwkk false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q6PHN9 uniprotkb:O88342 intact:EBI-1373353|ensembl:ENSMUSP00000031492 intact:EBI-6914976|ensembl:ENSMUSP00000005234 psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:wdr1_mouse(display_long)|uniprotkb:Wdr1(gene name)|psi-mi:Wdr1(display_short)|uniprotkb:Actin-interacting protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568540|imex:IM-24977-32 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) go:"GO:0045199"(maintenance of epithelial cell apical/basal polarity)|go:"GO:0045214"(sarcomere organization)|go:"GO:0048713"(regulation of oligodendrocyte differentiation)|go:"GO:0051015"(actin filament binding)|go:"GO:0060307"(regulation of ventricular cardiac muscle cell membrane repolarization)|go:"GO:1990266"(neutrophil migration)|interpro:IPR001680(WD40 repeat)|interpro:IPR011045(Nitrous oxide reductase, N-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|reactome:R-MMU-114608|ensembl:ENSMUSG00000005103(gene)|ensembl:ENSMUST00000005234(transcript)|go:"GO:0002102"(podosome)|go:"GO:0002446"(neutrophil mediated immunity)|go:"GO:0003779"(actin binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030042"(actin filament depolymerization)|go:"GO:0030043"(actin filament fragmentation)|go:"GO:0030054"(cell junction)|go:"GO:0030220"(platelet formation)|go:"GO:0030834"(regulation of actin filament depolymerization)|go:"GO:0030836"(positive regulation of actin filament depolymerization)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0030865"(cortical cytoskeleton organization)|go:"GO:0040011"(locomotion)|go:"GO:0042247"(establishment of planar polarity of follicular epithelium)|go:"GO:0042995"(cell projection)|go:"GO:0043209"(myelin sheath)|go:"GO:0043297"(apical junction assembly)|refseq:NP_035845.1|entrezgene/locuslink:22388(identity) - - author-confidence:1.8219660525615873 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 rogid:PVIlQDv8eXQrI3QBWJOjKlj/Zig10090 intact-crc:444DCB9653515207|rigid:asc00zoQedFeXbLohAmFVj1vwkk false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q6PHN9 uniprotkb:P35276 intact:EBI-1373353|ensembl:ENSMUSP00000031492 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568540|imex:IM-24977-32 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) - - author-confidence:1.5220833281270358 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 intact-crc:444DCB9653515207|rigid:asc00zoQedFeXbLohAmFVj1vwkk false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q6PHN9 uniprotkb:P47809 intact:EBI-1373353|ensembl:ENSMUSP00000031492 intact:EBI-447934|ensembl:ENSMUSP00000041282 psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:mp2k4_mouse(display_long)|uniprotkb:MAPK/ERK kinase 4(gene name synonym)|uniprotkb:JNK-activating kinase 1(gene name synonym)|uniprotkb:C-JUN N-terminal kinase kinase 1(gene name synonym)|uniprotkb:SAPK/ERK kinase 1(gene name synonym)|uniprotkb:Map2k4(gene name)|psi-mi:Map2k4(display_short)|uniprotkb:Jnkk1(gene name synonym)|uniprotkb:Prkmk4(gene name synonym)|uniprotkb:Sek1(gene name synonym)|uniprotkb:Serk1(gene name synonym)|uniprotkb:Skk1(gene name synonym)|uniprotkb:Mkk4(gene name synonym)|uniprotkb:Mek4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568540|imex:IM-24977-32 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) refseq:NP_033183.1|dip:DIP-869N|ensembl:ENSMUSG00000033352(gene)|ensembl:ENSMUST00000046963(transcript)|go:"GO:0000165"(MAPK cascade)|go:"GO:0000187"(obsolete activation of MAPK activity)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0004708"(MAP kinase kinase activity)|go:"GO:0004714"(transmembrane receptor protein tyrosine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006915"(apoptotic process)|go:"GO:0007254"(JNK cascade)|go:"GO:0007257"(obsolete activation of JUN kinase activity)|go:"GO:0008545"(JUN kinase kinase activity)|go:"GO:0009611"(response to wounding)|go:"GO:0030424"(axon)|go:"GO:0031435"(mitogen-activated protein kinase kinase kinase binding)|go:"GO:0032839"(dendrite cytoplasm)|go:"GO:0034393"(positive regulation of smooth muscle cell apoptotic process)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043204"(perikaryon)|go:"GO:0043507"(positive regulation of JUN kinase activity)|go:"GO:0043525"(positive regulation of neuron apoptotic process)|go:"GO:0045740"(positive regulation of DNA replication)|go:"GO:0051770"(positive regulation of nitric-oxide synthase biosynthetic process)|go:"GO:0061049"(cell growth involved in cardiac muscle cell development)|go:"GO:0071260"(cellular response to mechanical stimulus)|go:"GO:0072709"(cellular response to sorbitol)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:2000672"(negative regulation of motor neuron apoptotic process)|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|mint:P47809|reactome:R-MMU-2559580|reactome:R-MMU-2871796|reactome:R-MMU-450321|entrezgene/locuslink:26398(identity) - - author-confidence:12.214330467192294 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 rogid:6v5etIlqj4yLuTNnVlEBVRaMYKg10090 intact-crc:444DCB9653515207|rigid:asc00zoQedFeXbLohAmFVj1vwkk false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q6PHN9 uniprotkb:Q5QNQ9 intact:EBI-1373353|ensembl:ENSMUSP00000031492 intact:EBI-9303806|uniprotkb:Q69Z83|uniprotkb:Q80UA8|ensembl:ENSMUSP00000043816 psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:cora1_mouse(display_long)|uniprotkb:Col27a1(gene name)|psi-mi:Col27a1(display_short)|uniprotkb:Kiaa1870(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568540|imex:IM-24977-32 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) refseq:NP_079961.3|ensembl:ENSMUSG00000045672(gene)|ensembl:ENSMUST00000036300(transcript)|go:"GO:0003431"(growth plate cartilage chondrocyte development)|go:"GO:0005201"(extracellular matrix structural constituent)|go:"GO:0005583"(fibrillar collagen trimer)|go:"GO:0005615"(extracellular space)|go:"GO:0030198"(extracellular matrix organization)|go:"GO:0031012"(extracellular matrix)|go:"GO:0046872"(metal ion binding)|go:"GO:0062023"(collagen-containing extracellular matrix)|interpro:IPR000885(Fibrillar collagen, C-terminal)|interpro:IPR001791(Laminin G)|interpro:IPR008160(Collagen triple helix repeat)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|reactome:R-MMU-1650814|reactome:R-MMU-2022090|reactome:R-MMU-8874081|reactome:R-MMU-8948216|entrezgene/locuslink:373864(identity) - - author-confidence:10.563190466585388 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 rogid:gWD6YpwChTj0BFrqVBO9E0seCOE10090 intact-crc:444DCB9653515207|rigid:asc00zoQedFeXbLohAmFVj1vwkk false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q6PHN9 uniprotkb:Q8BHC1 intact:EBI-1373353|ensembl:ENSMUSP00000031492 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568540|imex:IM-24977-32 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - - author-confidence:1.4005237237580301 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:444DCB9653515207|rigid:asc00zoQedFeXbLohAmFVj1vwkk false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q6PHN9 uniprotkb:P47738 intact:EBI-1373353|ensembl:ENSMUSP00000031492 intact:EBI-2308120|ensembl:ENSMUSP00000031411 psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:aldh2_mouse(display_long)|uniprotkb:Aldh2(gene name)|psi-mi:Aldh2(display_short)|uniprotkb:Ahd-1(gene name synonym)|uniprotkb:Ahd1(gene name synonym)|uniprotkb:ALDH class 2(gene name synonym)|uniprotkb:AHD-M1(gene name synonym)|uniprotkb:ALDHI(gene name synonym)|uniprotkb:ALDH-E2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568540|imex:IM-24977-32 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) refseq:NP_033786.1|ensembl:ENSMUSG00000029455(gene)|ensembl:ENSMUST00000031411(transcript)|go:"GO:0004029"("aldehyde dehydrogenase (NAD+) activity")|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006068"(ethanol catabolic process)|go:"GO:0006117"(acetaldehyde metabolic process)|go:"GO:0008631"(intrinsic apoptotic signaling pathway in response to oxidative stress)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043878"("glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity")|go:"GO:0048149"(behavioral response to ethanol)|go:"GO:0050727"(regulation of inflammatory response)|go:"GO:0051287"(NAD binding)|go:"GO:0070404"(NADH binding)|go:"GO:0110095"(cellular detoxification of aldehyde)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016160(Aldehyde dehydrogenase, conserved site)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR029510|mint:P47738|reactome:R-MMU-380612|reactome:R-MMU-71384|entrezgene/locuslink:11669(identity) - - author-confidence:1.4146253518713217 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 rogid:C4L2qigIlQeaZH4RsNocJovkPMw10090 intact-crc:444DCB9653515207|rigid:asc00zoQedFeXbLohAmFVj1vwkk false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q64008 uniprotkb:P15208 intact:EBI-9986497|uniprotkb:Q8BHJ0|uniprotkb:Q99P59|uniprotkb:Q99P90 intact:EBI-6999015|ensembl:ENSMUSP00000088837|uniprotkb:F8VPU4|intact:MINT-1516207 psi-mi:rab34_mouse(display_long)|uniprotkb:Rab34(gene name)|psi-mi:Rab34(display_short)|uniprotkb:Rab39(gene name synonym)|uniprotkb:Rah(gene name synonym)|uniprotkb:Rah1(gene name synonym)|uniprotkb:Ras-related homolog(gene name synonym)|uniprotkb:Ras-related protein Rab-39(gene name synonym)|uniprotkb:Ras-related protein Rah(gene name synonym) psi-mi:insr_mouse(display_long)|uniprotkb:Insr(gene name)|psi-mi:Insr(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568517|imex:IM-24977-31 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) reactome:R-MMU-8873719|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0005929"(cilium)|go:"GO:0006897"(endocytosis)|go:"GO:0007041"(lysosomal transport)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030030"(cell projection organization)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031982"(vesicle)|go:"GO:0031985"(Golgi cisterna)|go:"GO:0032418"(lysosome localization)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045880"(positive regulation of smoothened signaling pathway)|go:"GO:0005770"(late endosome)|go:"GO:0050714"(positive regulation of protein secretion)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:0090385"(phagosome-lysosome fusion)|go:"GO:1900426"(positive regulation of defense response to bacterium)|go:"GO:1905171"(positive regulation of protein localization to phagocytic vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR027417|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|refseq:NP_001152954.1|refseq:NP_258436.2|entrezgene/locuslink:19376(identity) ensembl:ENSMUSG00000005534(gene)|ensembl:ENSMUST00000091291(transcript)|go:"GO:0000187"(obsolete activation of MAPK activity)|go:"GO:0001540"(amyloid-beta binding)|go:"GO:0001933"(negative regulation of protein phosphorylation)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0002092"(positive regulation of receptor internalization)|go:"GO:0003007"(heart morphogenesis)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004713"(protein tyrosine kinase activity)|go:"GO:0004714"(transmembrane receptor protein tyrosine kinase activity)|go:"GO:0005009"(insulin-activated receptor activity)|go:"GO:0005159"(insulin-like growth factor receptor binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0005899"(insulin receptor complex)|go:"GO:0005901"(caveola)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006898"(receptor-mediated endocytosis)|go:"GO:0007169"(transmembrane receptor protein tyrosine kinase signaling pathway)|go:"GO:0007186"(G protein-coupled receptor signaling pathway)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008286"(insulin receptor signaling pathway)|go:"GO:0008544"(epidermis development)|go:"GO:0008584"(male gonad development)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0009897"(external side of plasma membrane)|go:"GO:0010310"(regulation of hydrogen peroxide metabolic process)|go:"GO:0010560"(positive regulation of glycoprotein biosynthetic process)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0014068"(positive regulation of phosphatidylinositol 3-kinase signaling)|go:"GO:0016020"(membrane)|go:"GO:0018108"(peptidyl-tyrosine phosphorylation)|go:"GO:0019087"(transformation of host cell by virus)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030238"(male sex determination)|go:"GO:0030325"(adrenal gland development)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030424"(axon)|go:"GO:0031017"(exocrine pancreas development)|go:"GO:0031405"(lipoic acid binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031667"(response to nutrient levels)|go:"GO:0031994"(insulin-like growth factor I binding)|go:"GO:0031995"(insulin-like growth factor II binding)|go:"GO:0032148"(activation of protein kinase B activity)|go:"GO:0032410"(negative regulation of transporter activity)|go:"GO:0032590"(dendrite membrane)|go:"GO:0032809"(neuronal cell body membrane)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0033674"(positive regulation of kinase activity)|go:"GO:0034612"(response to tumor necrosis factor)|go:"GO:0038024"(cargo receptor activity)|go:"GO:0038083"(peptidyl-tyrosine autophosphorylation)|go:"GO:0042327"(positive regulation of phosphorylation)|go:"GO:0042593"(glucose homeostasis)|go:"GO:0042802"(identical protein binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043235"(receptor complex)|go:"GO:0043243"(positive regulation of protein-containing complex disassembly)|go:"GO:0043410"(positive regulation of MAPK cascade)|go:"GO:0043423"(3-phosphoinositide-dependent protein kinase binding)|go:"GO:0043548"(phosphatidylinositol 3-kinase binding)|go:"GO:0043559"(insulin binding)|go:"GO:0043560"(insulin receptor substrate binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045202"(synapse)|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045725"(positive regulation of glycogen biosynthetic process)|go:"GO:0032147"(activation of protein kinase activity)|go:"GO:0045821"(positive regulation of glycolytic process)|go:"GO:0045840"(positive regulation of mitotic nuclear division)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045995"(regulation of embryonic development)|go:"GO:0046326"(positive regulation of glucose import)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0048639"(positive regulation of developmental growth)|go:"GO:0051425"(PTB domain binding)|go:"GO:0051446"(positive regulation of meiotic cell cycle)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060267"(positive regulation of respiratory burst)|go:"GO:0060417"(yolk)|go:"GO:0071363"(cellular response to growth factor stimulus)|go:"GO:0097062"(dendritic spine maintenance)|go:"GO:0097242"(amyloid-beta clearance)|go:"GO:2000194"(regulation of female gonad development)|go:"GO:2000252"(negative regulation of feeding behavior)|interpro:IPR000494(EGF receptor, L domain)|go:"GO:1990535"(neuron projection maintenance)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001245(Tyrosine protein kinase)|interpro:IPR002011(Receptor tyrosine kinase, class II, conserved site)|interpro:IPR003961(Fibronectin, type III)|interpro:IPR006211(Furin-like cysteine rich region)|interpro:IPR006212(Furin-like repeat)|interpro:IPR008266(Tyrosine protein kinase, active site)|interpro:IPR009030(Growth factor, receptor)|interpro:IPR011009(Protein kinase-like)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR016246(Insulin receptor)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR020635|interpro:IPR036116|interpro:IPR036941|interpro:IPR040969|mint:P15208|rcsb pdb:1LK2|reactome:R-MMU-6811558|reactome:R-MMU-74713|reactome:R-MMU-74749|reactome:R-MMU-74751|reactome:R-MMU-74752|reactome:R-MMU-77387|refseq:NP_034698.2|dip:DIP-41452N|entrezgene/locuslink:16337(identity) - - comment:mint|function:This receptor binds insulin and has a tyrosine-protein kinase activity|author-confidence:2.5889875209516275 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:BBB9N/zuCY5aiJ1YDRDJLFB8mgQ10090 rogid:DduFddui4LY0r8EIHI5S5EN485Y10090 intact-crc:E60277423E4F523F|rigid:ndTBky8qxGE5rlEA2qrvuSpYLD0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q64008 uniprotkb:Q9CQD1 intact:EBI-9986497|uniprotkb:Q8BHJ0|uniprotkb:Q99P59|uniprotkb:Q99P90 intact:EBI-647712|uniprotkb:Q9DCN5|uniprotkb:Q3UCX7|uniprotkb:Q4VAA1|ensembl:ENSMUSP00000017975 psi-mi:rab34_mouse(display_long)|uniprotkb:Rab34(gene name)|psi-mi:Rab34(display_short)|uniprotkb:Rab39(gene name synonym)|uniprotkb:Rah(gene name synonym)|uniprotkb:Rah1(gene name synonym)|uniprotkb:Ras-related homolog(gene name synonym)|uniprotkb:Ras-related protein Rab-39(gene name synonym)|uniprotkb:Ras-related protein Rah(gene name synonym) psi-mi:rab5a_mouse(display_long)|uniprotkb:Rab5a(gene name)|psi-mi:Rab5a(display_short)|uniprotkb:nnyRab5a(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568517|imex:IM-24977-31 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) reactome:R-MMU-8873719|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0005929"(cilium)|go:"GO:0006897"(endocytosis)|go:"GO:0007041"(lysosomal transport)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030030"(cell projection organization)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031982"(vesicle)|go:"GO:0031985"(Golgi cisterna)|go:"GO:0032418"(lysosome localization)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045880"(positive regulation of smoothened signaling pathway)|go:"GO:0005770"(late endosome)|go:"GO:0050714"(positive regulation of protein secretion)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:0090385"(phagosome-lysosome fusion)|go:"GO:1900426"(positive regulation of defense response to bacterium)|go:"GO:1905171"(positive regulation of protein localization to phagocytic vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR027417|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|refseq:NP_001152954.1|refseq:NP_258436.2|entrezgene/locuslink:19376(identity) refseq:NP_080163.1|ensembl:ENSMUSG00000017831(gene)|ensembl:ENSMUST00000017975(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006909"(phagocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032009"(early phagosome)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043679"(axon terminus)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045121"(membrane raft)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:0098842"(postsynaptic early endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000286"(receptor internalization involved in canonical Wnt signaling pathway)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-1660499|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-983231|go:"GO:0008021"(synaptic vesicle)|entrezgene/locuslink:271457(identity) - - author-confidence:91.19594301514229 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:BBB9N/zuCY5aiJ1YDRDJLFB8mgQ10090 rogid:TleQFpdeUdtlHFp7sMsgWpx6p8E10090 intact-crc:E60277423E4F523F|rigid:ndTBky8qxGE5rlEA2qrvuSpYLD0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q64008 uniprotkb:Q80TP3 intact:EBI-9986497|uniprotkb:Q8BHJ0|uniprotkb:Q99P59|uniprotkb:Q99P90 intact:EBI-2553642|uniprotkb:Q810V6|uniprotkb:Q698K9|uniprotkb:Q9CXE9|uniprotkb:Q6PFQ9|uniprotkb:Q80VL4|uniprotkb:Q6PEQ8 psi-mi:rab34_mouse(display_long)|uniprotkb:Rab34(gene name)|psi-mi:Rab34(display_short)|uniprotkb:Rab39(gene name synonym)|uniprotkb:Rah(gene name synonym)|uniprotkb:Rah1(gene name synonym)|uniprotkb:Ras-related homolog(gene name synonym)|uniprotkb:Ras-related protein Rab-39(gene name synonym)|uniprotkb:Ras-related protein Rah(gene name synonym) psi-mi:ubr5_mouse(display_long)|uniprotkb:Ubr5(gene name)|psi-mi:Ubr5(display_short)|uniprotkb:Edd(gene name synonym)|uniprotkb:Edd1(gene name synonym)|uniprotkb:Kiaa0896(gene name synonym)|uniprotkb:E3 ubiquitin-protein ligase, HECT domain-containing 1(gene name synonym)|uniprotkb:Hyperplastic discs protein homolog(gene name synonym)|uniprotkb:HECT-type E3 ubiquitin transferase UBR5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568517|imex:IM-24977-31 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) reactome:R-MMU-8873719|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0005929"(cilium)|go:"GO:0006897"(endocytosis)|go:"GO:0007041"(lysosomal transport)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030030"(cell projection organization)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031982"(vesicle)|go:"GO:0031985"(Golgi cisterna)|go:"GO:0032418"(lysosome localization)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045880"(positive regulation of smoothened signaling pathway)|go:"GO:0005770"(late endosome)|go:"GO:0050714"(positive regulation of protein secretion)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:0090385"(phagosome-lysosome fusion)|go:"GO:1900426"(positive regulation of defense response to bacterium)|go:"GO:1905171"(positive regulation of protein localization to phagocytic vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR027417|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|refseq:NP_001152954.1|refseq:NP_258436.2|entrezgene/locuslink:19376(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0032700"(negative regulation of interleukin-17 production)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034450"(ubiquitin-ubiquitin ligase activity)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050847"(progesterone receptor signaling pathway)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:1901315"(negative regulation of histone H2A K63-linked ubiquitination)|go:"GO:2000779"(regulation of double-strand break repair)|go:"GO:2000780"(negative regulation of double-strand break repair)|interpro:IPR000569(HECT)|interpro:IPR002004(Polyadenylate-binding protein/Hyperplastic disc protein)|interpro:IPR003126(Zinc finger, N-recognin)|interpro:IPR009091(Regulator of chromosome condensation/beta-lactamase-inhibitor protein II)|interpro:IPR024725|interpro:IPR035983|interpro:IPR036053|go:"GO:0061630"(ubiquitin protein ligase activity)|refseq:NP_001074828.2|refseq:NP_001106192.1|dip:DIP-56890N|mint:Q80TP3|entrezgene/locuslink:70790(identity) - - author-confidence:1.3426891983313667 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:BBB9N/zuCY5aiJ1YDRDJLFB8mgQ10090 rogid:iUtn1CtWFtqWQV3UH06xJ5R5Ux010090 intact-crc:E60277423E4F523F|rigid:ndTBky8qxGE5rlEA2qrvuSpYLD0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:P56371 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) - - comment:mint|function:Protein transport. Probably involved in vesicular traffic|author-confidence:1.7839452071422068 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q3UHH1 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-8419341|uniprotkb:Q8CE12|uniprotkb:Q8CHC3|intact:MINT-4115901|uniprotkb:Q9D789|uniprotkb:Q80Y41|uniprotkb:Q5U4B9|uniprotkb:Q6PCY6|uniprotkb:B2RX90|ensembl:ENSMUSP00000022358 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:zswm8_mouse(display_long)|uniprotkb:Zswim8(gene name)|psi-mi:Zswim8(display_short)|uniprotkb:Kiaa0913(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_001239010.1|refseq:NP_001239011.1|refseq:NP_082272.1|ensembl:ENSMUSG00000021819(gene)|ensembl:ENSMUST00000022358(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031462"(Cul2-RING ubiquitin ligase complex)|go:"GO:0031463"(Cul3-RING ubiquitin ligase complex)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:1902667"(regulation of axon guidance)|go:"GO:1990756"(ubiquitin ligase-substrate adaptor activity)|go:"GO:2000627"(positive regulation of miRNA catabolic process)|interpro:IPR007527(Zinc finger, SWIM-type)|mint:Q3UHH1|entrezgene/locuslink:268721(identity) - - comment:mint|author-confidence:31.848437843057802 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:C5V4tZMPbr+6VWuzv3N9p7BzPfw10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q8VDQ1 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-8344793|uniprotkb:Q3ULY3|uniprotkb:Q3TG36|uniprotkb:Q9D1W8|intact:UNK-5404747|uniprotkb:Q8BZA2|intact:MINT-4126675|ensembl:ENSMUSP00000115704|ensembl:ENSMUSP00000119981 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:ptgr2_mouse(display_long)|uniprotkb:Zadh1(gene name synonym)|uniprotkb:15-oxoprostaglandin 13-reductase(gene name synonym)|uniprotkb:Zinc-binding alcohol dehydrogenase domain-containing protein 1(gene name synonym)|uniprotkb:Ptgr2(gene name)|psi-mi:Ptgr2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_084156.2|refseq:NP_001239555.1|refseq:NP_001239554.1|ensembl:ENSMUSG00000072946(gene)|ensembl:ENSMUST00000123614(transcript)|ensembl:ENSMUST00000146377(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006693"(prostaglandin metabolic process)|go:"GO:0036132"(13-prostaglandin reductase activity)|go:"GO:0047522"(15-oxoprostaglandin 13-oxidase activity)|interpro:IPR011032(GroES-like)|interpro:IPR013149(Alcohol dehydrogenase, zinc-binding)|interpro:IPR036291|interpro:IPR037399|interpro:IPR041694|mint:Q8VDQ1|rcsb pdb:1VJ1|rcsb pdb:2ZB3|entrezgene/locuslink:77219(identity) - - comment:mint|function:May function as NADPH-dependent oxidoreductase|author-confidence:2.2592950256953084 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:QNea4rx85xekDMhzgPb/VzCO7+010090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q80TN7 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11568593 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:nav3_mouse(display_long)|uniprotkb:Kiaa0938(gene name synonym)|uniprotkb:Pomfil1(gene name synonym)|uniprotkb:Pore membrane and/or filament-interacting-like protein 1(gene name synonym)|uniprotkb:Nav3(gene name)|psi-mi:Nav3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) interpro:IPR001715(Calponin-like actin-binding)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR027417|refseq:XP_006513738.1|mint:Q80TN7|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005640"(nuclear outer membrane)|go:"GO:0007026"(negative regulation of microtubule depolymerization)|go:"GO:0007399"(nervous system development)|go:"GO:0008017"(microtubule binding)|go:"GO:0022008"(neurogenesis)|go:"GO:0030336"(negative regulation of cell migration)|go:"GO:0031116"(positive regulation of microtubule polymerization)|go:"GO:0032703"(negative regulation of interleukin-2 production)|interpro:IPR036872|interpro:IPR039041|entrezgene/locuslink:260315(identity) - - author-confidence:6.960313734450278 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:vb9nb25PTROlcYWeCIL6pbnN1Dk10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:P35276 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) - - author-confidence:1.5624246946283507 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q9QZS7 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11568604|uniprotkb:Q811S5|uniprotkb:D2KXA7|uniprotkb:Q9ET59|uniprotkb:Q9JIX1|uniprotkb:Q9ESC6|uniprotkb:Q925S5|ensembl:ENSMUSP00000006825 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:nphn_mouse(display_long)|uniprotkb:Nphn(gene name synonym)|uniprotkb:Renal glomerulus-specific cell adhesion receptor(gene name synonym)|uniprotkb:Nphs1(gene name)|psi-mi:Nphs1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_062332.2|refseq:XP_011248949.1|ensembl:ENSMUSG00000006649(gene)|ensembl:ENSMUST00000006825(transcript)|go:"GO:0000165"(MAPK cascade)|go:"GO:0005604"(basement membrane)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005925"(focal adhesion)|go:"GO:0007155"(cell adhesion)|go:"GO:0007254"(JNK cascade)|go:"GO:0007519"(skeletal muscle tissue development)|go:"GO:0007520"(myoblast fusion)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0017022"(myosin binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030507"(spectrin binding)|go:"GO:0030838"(positive regulation of actin filament polymerization)|go:"GO:0032836"(glomerular basement membrane development)|go:"GO:0032991"(protein-containing complex)|go:"GO:0035418"(protein localization to synapse)|go:"GO:0036057"(slit diaphragm)|go:"GO:0042995"(cell projection)|go:"GO:0044062"(regulation of excretion)|go:"GO:0045121"(membrane raft)|go:"GO:0050839"(cell adhesion molecule binding)|go:"GO:0051393"(alpha-actinin binding)|go:"GO:0072015"(glomerular visceral epithelial cell development)|go:"GO:0098609"(cell-cell adhesion)|interpro:IPR003598(Immunoglobulin subtype 2)|interpro:IPR003599(Immunoglobulin subtype)|interpro:IPR003961(Fibronectin, type III)|interpro:IPR007110(Immunoglobulin-like)|interpro:IPR013098(Immunoglobulin I-set)|interpro:IPR013162(CD80-like, immunoglobulin C2-set)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR036116|interpro:IPR036179|reactome:R-MMU-373753|dip:DIP-61265N|entrezgene/locuslink:54631(identity) - - author-confidence:17.709145887590388 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:kxeU9ZgTQdZrrxoiXOZIeyf4ZJg10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:P62631 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-642385|uniprotkb:P27706|ensembl:ENSMUSP00000054556 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:ef1a2_mouse(display_long)|uniprotkb:Eukaryotic elongation factor 1 A-2(gene name synonym)|uniprotkb:Statin-S1(gene name synonym)|uniprotkb:Eef1a2(gene name)|psi-mi:Eef1a2(display_short)|uniprotkb:Eef1al(gene name synonym)|uniprotkb:Stn(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_031932.1|go:"GO:0003746"(translation elongation factor activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005853"(eukaryotic translation elongation factor 1 complex)|go:"GO:0006412"(translation)|go:"GO:0006414"(translational elongation)|go:"GO:0010035"(response to inorganic substance)|go:"GO:0019901"(protein kinase binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0045202"(synapse)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0090218"(positive regulation of lipid kinase activity)|interpro:IPR000795(Protein synthesis factor, GTP-binding)|interpro:IPR004160(Translation elongation factor EFTu/EF1A, C-terminal)|interpro:IPR004161(Translation elongation factor EFTu/EF1A, domain 2)|interpro:IPR004539(Translation elongation factor EF1A, eukaryotic and archaeal)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR009001(Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal)|interpro:IPR027417|interpro:IPR031157|mint:P62631|ensembl:ENSMUSG00000016349(gene)|ensembl:ENSMUST00000055990(transcript)|entrezgene/locuslink:13628(identity) - - author-confidence:1.430333494579798 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:5Wr8A9JfvVaH+KRGc6VSnF2rkYE10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q9R216 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11566835|uniprotkb:Q9R2B3|uniprotkb:Q9CX16|uniprotkb:O35494|ensembl:ENSMUSP00000053551 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:fzd9_mouse(display_long)|uniprotkb:Fzd3(gene name synonym)|uniprotkb:Fzd9(gene name)|psi-mi:Fzd9(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_034376.1|ensembl:ENSMUSG00000049551(gene)|ensembl:ENSMUST00000062572(transcript)|go:"GO:0001503"(ossification)|go:"GO:0001836"(release of cytochrome c from mitochondria)|go:"GO:0004930"(G protein-coupled receptor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0007405"(neuroblast proliferation)|go:"GO:0007611"(learning or memory)|go:"GO:0009986"(cell surface)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0017147"(Wnt-protein binding)|go:"GO:0030183"(B cell differentiation)|go:"GO:0030501"(positive regulation of bone mineralization)|go:"GO:0031527"(filopodium membrane)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042813"(Wnt-activated receptor activity)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051480"(regulation of cytosolic calcium ion concentration)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051902"(negative regulation of mitochondrial depolarization)|go:"GO:0060070"(canonical Wnt signaling pathway)|go:"GO:0060546"(negative regulation of necroptotic process)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:0098794"(postsynapse)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099173"(postsynapse organization)|go:"GO:0099566"(regulation of postsynaptic cytosolic calcium ion concentration)|go:"GO:1901029"(negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway)|go:"GO:1904393"(regulation of skeletal muscle acetylcholine-gated channel clustering)|go:"GO:1904394"(negative regulation of skeletal muscle acetylcholine-gated channel clustering)|go:"GO:1990523"(bone regeneration)|go:"GO:2000179"(positive regulation of neural precursor cell proliferation)|interpro:IPR000539(Frizzled protein)|interpro:IPR015526(Frizzled related)|interpro:IPR017981|interpro:IPR020067|interpro:IPR036790|interpro:IPR041777|entrezgene/locuslink:14371(identity) - - author-confidence:1.7677015595686687 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:bODmWpwG3O8MJo8Kyy1yBYHSGqE10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q5BL07 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11566800|uniprotkb:Q9CU85|uniprotkb:Q3UEC7|ensembl:ENSMUSP00000113304 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:pex1_mouse(display_long)|uniprotkb:Peroxin-1(gene name synonym)|uniprotkb:Pex1(gene name)|psi-mi:Pex1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_001280735.1|refseq:NP_082053.1|ensembl:ENSMUSG00000005907(gene)|ensembl:ENSMUST00000121291(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005777"(peroxisome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006625"(protein targeting to peroxisome)|go:"GO:0007031"(peroxisome organization)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008289"(lipid binding)|go:"GO:0016558"(protein import into peroxisome matrix)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0060152"(microtubule-based peroxisome localization)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR015342(Peroxisome biogenesis factor 1, N-terminal)|interpro:IPR015343(Peroxisome biogenesis factor 1, alpha/beta)|interpro:IPR025653|interpro:IPR027417|interpro:IPR029067|interpro:IPR041569|rcsb pdb:1WLF|reactome:R-MMU-9033241|entrezgene/locuslink:71382(identity) - - author-confidence:9.89862892904382 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:D8vvEOknIg7wJfkwC8JS7gLBiDA10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:P70263 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11568615|uniprotkb:Q8CCM3|uniprotkb:A2RSY4|ensembl:ENSMUSP00000093653 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:pd2r_mouse(display_long)|uniprotkb:Prostanoid DP receptor(gene name synonym)|uniprotkb:Ptgdr(gene name)|psi-mi:Ptgdr(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_032988.3|ensembl:ENSMUSG00000071489(gene)|ensembl:ENSMUST00000095959(transcript)|go:"GO:0001785"(prostaglandin J receptor activity)|go:"GO:0004956"(prostaglandin D receptor activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006954"(inflammatory response)|go:"GO:0007204"(positive regulation of cytosolic calcium ion concentration)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030238"(male sex determination)|go:"GO:0030431"(sleep)|go:"GO:0043303"(mast cell degranulation)|go:"GO:0046085"(adenosine metabolic process)|go:"GO:0071799"(cellular response to prostaglandin D stimulus)|interpro:IPR000276(GPCR, rhodopsin-like)|interpro:IPR000376(Prostaglandin D receptor)|interpro:IPR008365(Prostanoid receptor)|interpro:IPR017452(GPCR, rhodopsin-like superfamily)|reactome:R-MMU-391908|reactome:R-MMU-418555|entrezgene/locuslink:19214(identity) - - author-confidence:326.1005071231072 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:7ki6ygerdyYvIT0hr26o/78nxmI10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q8CB87 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11568646|uniprotkb:B9EID0|ensembl:ENSMUSP00000156400 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:rab44_mouse(display_long)|uniprotkb:Rab44(gene name)|psi-mi:Rab44(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_001002786.1|refseq:XP_006524660.1|ensembl:ENSMUSG00000064147(gene)|ensembl:ENSMUST00000233717(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR011992(EF-Hand type)|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-8873719|refseq:XP_006524654.1|refseq:XP_011244831.1|entrezgene/locuslink:442827(identity) - - author-confidence:66.69802345154305 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:IbNCT4+9zvpjRIyPcIDQ5lWP90Y10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:F8VPR5 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-10989694|ensembl:ENSMUSP00000023165 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:f8vpr5_mouse(display_long)|uniprotkb:Crebbp(gene name)|psi-mi:Crebbp(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_001020603.1|ensembl:ENSMUSG00000022521(gene)|ensembl:ENSMUST00000023165(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000123"(histone acetyltransferase complex)|go:"GO:0000785"(chromatin)|go:"GO:0001223"(transcription coactivator binding)|go:"GO:0002039"(p53 binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004402"(histone acetyltransferase activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016604"(nuclear body)|go:"GO:0018076"(N-terminal peptidyl-lysine acetylation)|go:"GO:0030511"(positive regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0031648"(protein destabilization)|go:"GO:0034644"(cellular response to UV)|go:"GO:0043426"(MRF binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048511"(rhythmic process)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1990258"(histone glutamine methylation)|interpro:IPR000197(Zinc finger, TAZ-type)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001487(Bromodomain)|interpro:IPR003101(Coactivator CBP, KIX)|interpro:IPR009110(Nuclear receptor coactivator, interlocking)|interpro:IPR010303(Protein of unknown function DUF902, CREBbp)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013178(H3K56 histone acetylation protein, RTT109)|interpro:IPR014744(Nuclear receptor coactivator, CREB-bp-like, interlocking)|interpro:IPR018359|interpro:IPR031162|interpro:IPR035898|interpro:IPR036427|interpro:IPR036529|interpro:IPR037073|interpro:IPR038547|interpro:IPR043145|go:"GO:0005737"(cytoplasm)|entrezgene/locuslink:12914(identity) - - author-confidence:2.6752038042265616 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:9K1igrA8QbILB/vG1/XLKh9kzJM10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q9JKM7 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-444699|uniprotkb:Q8C7E1 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:rab37_mouse(display_long)|uniprotkb:Rab37(gene name)|psi-mi:Rab37(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_067386.3|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0015031"(protein transport)|go:"GO:0030141"(secretory granule)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-8873719|entrezgene/locuslink:58222(identity) - - author-confidence:7.595779507656826 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:e0z4I79OQSZSGejZss4AbqTnswg10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q8CAQ8 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-776087|uniprotkb:Q66JS4|uniprotkb:Q7TNE2|uniprotkb:Q8C7V1|uniprotkb:Q8CCI0|uniprotkb:Q8CDA8|uniprotkb:Q9D9F6|ensembl:ENSMUSP00000066181 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:mic60_mouse(display_long)|uniprotkb:Mitofilin(gene name synonym)|uniprotkb:Immt(gene name)|psi-mi:Immt(display_short)|uniprotkb:Mic60(gene name synonym)|uniprotkb:Mitochondrial inner membrane protein(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_083949.2|refseq:NP_001240617.1|refseq:NP_001240610.1|refseq:NP_001240616.1|dip:DIP-32050N|ensembl:ENSMUSG00000052337(gene)|ensembl:ENSMUST00000064062(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|mint:Q8CAQ8|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0042407"(cristae formation)|go:"GO:0043209"(myelin sheath)|go:"GO:0051560"(mitochondrial calcium ion homeostasis)|go:"GO:0061617"(MICOS complex)|interpro:IPR019133|entrezgene/locuslink:76614(identity) - - author-confidence:5.350943113318184 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:fW23bvuLqjLn5wIOu6ycDsh7O1k10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q8C110 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11568658|uniprotkb:Q8BLL0|ensembl:ENSMUSP00000077492 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:slik6_mouse(display_long)|uniprotkb:Sltk6(gene name synonym)|uniprotkb:Slitrk6(gene name)|psi-mi:Slitrk6(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_780708.1|ensembl:ENSMUSG00000045871(gene)|ensembl:ENSMUST00000078386(transcript)|go:"GO:0001964"(startle response)|go:"GO:0002088"(lens development in camera-type eye)|go:"GO:0002093"(auditory receptor cell morphogenesis)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0007409"(axonogenesis)|go:"GO:0007416"(synapse assembly)|go:"GO:0007601"(visual perception)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0008344"(adult locomotory behavior)|go:"GO:0009986"(cell surface)|go:"GO:0016021"(integral component of membrane)|go:"GO:0021562"(vestibulocochlear nerve development)|go:"GO:0031223"(auditory behavior)|go:"GO:0035264"(multicellular organism growth)|go:"GO:0042472"(inner ear morphogenesis)|go:"GO:0043010"(camera-type eye development)|go:"GO:0048812"(neuron projection morphogenesis)|go:"GO:0051965"(positive regulation of synapse assembly)|go:"GO:0060005"(vestibular reflex)|go:"GO:0060007"(linear vestibuloocular reflex)|go:"GO:0060384"(innervation)|go:"GO:0071944"(cell periphery)|go:"GO:0090102"(cochlea development)|go:"GO:1905606"(regulation of presynapse assembly)|interpro:IPR000483(Cysteine-rich flanking region, C-terminal)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR003591(Leucine-rich repeat, typical subtype)|interpro:IPR032675|interpro:IPR043326|reactome:R-MMU-388844|entrezgene/locuslink:239250(identity) - - author-confidence:25.929145566287467 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:sEXEdmdhtgsFWIWudV+FOzzM9KY10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q8C7V8 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11568641|uniprotkb:Q3U3V9|ensembl:ENSMUSP00000086578 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:cc134_mouse(display_long)|uniprotkb:Ccdc134(gene name)|psi-mi:Ccdc134(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_766016.2|ensembl:ENSMUSG00000068114(gene)|ensembl:ENSMUST00000089174(transcript)|go:"GO:0001525"(angiogenesis)|go:"GO:0001890"(placenta development)|go:"GO:0005576"(extracellular region)|go:"GO:1990402"(embryonic liver development)|interpro:IPR026321|go:"GO:0005634"(nucleus)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0021591"(ventricular system development)|go:"GO:0035162"(embryonic hemopoiesis)|refseq:NP_001313517.1|entrezgene/locuslink:76457(identity) - - author-confidence:1.1463374144754104 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:LTljrywRwfPfSH1pEbt0l9KKcXg10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q6P5U7 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11568651|uniprotkb:Q8CHA7|uniprotkb:Q3UVW7|ensembl:ENSMUSP00000124712 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:nwd2_mouse(display_long)|uniprotkb:Kiaa1239(gene name synonym)|uniprotkb:Leucine-rich repeat and WD repeat-containing protein KIAA1239(gene name synonym)|uniprotkb:Nwd2(gene name)|psi-mi:Nwd2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_795980.2|ensembl:ENSMUSG00000090061(gene)|ensembl:ENSMUST00000159584(transcript)|interpro:IPR001680(WD40 repeat)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR027417|interpro:IPR036322|mint:Q6P5U7|entrezgene/locuslink:319807(identity) - - author-confidence:5.255444745715515 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:SZKbZVvtYGyQw0UAMUWAz6Jl0uw10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:P62821 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) - - author-confidence:37.28898877046298 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q8C4H2 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11568636|uniprotkb:E9QPH5 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:samd3_mouse(display_long)|uniprotkb:Gm623(gene name synonym)|uniprotkb:Samd3(gene name)|psi-mi:Samd3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) interpro:IPR001660(Sterile alpha motif SAM)|interpro:IPR013761(Sterile alpha motif-type)|refseq:NP_001013788.2|refseq:NP_001108626.1|refseq:XP_006512810.1|interpro:IPR042812|interpro:IPR042813|entrezgene/locuslink:268288(identity) - - author-confidence:39.837634924913296 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:SgbbsPVU4dVFKZ+TuF7kxlmFxfU10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q8BHD0 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-10767908|ensembl:ENSMUSP00000063804 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:rb39a_mouse(display_long)|uniprotkb:Rab39a(gene name)|psi-mi:Rab39a(display_short)|uniprotkb:Rab39(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_780771.1|ensembl:ENSMUSG00000055069(gene)|ensembl:ENSMUST00000068449(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0090383"(phagosome acidification)|go:"GO:0090385"(phagosome-lysosome fusion)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|reactome:R-MMU-6811438|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:270160(identity) - - author-confidence:1.0835048436415045 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:yQx1nTclLLdzc9qoUOr6AdDeWyo10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q60952 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-643450|uniprotkb:E9QMB2|uniprotkb:Q2I8G3|uniprotkb:Q3UTR4|uniprotkb:Q6PFF6|uniprotkb:Q8BLC6|ensembl:ENSMUSP00000091988 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:cp250_mouse(display_long)|uniprotkb:Centrosomal protein 2(gene name synonym)|uniprotkb:Centrosomal Nek2-associated protein 1(gene name synonym)|uniprotkb:Intranuclear matrix protein(gene name synonym)|uniprotkb:Cep250(gene name)|psi-mi:Cep250(display_short)|uniprotkb:Inmp(gene name synonym)|uniprotkb:Cep2(gene name synonym)|uniprotkb:250 kDa centrosomal protein(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_001123471.1|refseq:NP_032409.3|refseq:NP_796191.2|go:"GO:0060271"(cilium assembly)|go:"GO:1905515"(non-motile cilium assembly)|reactome:R-MMU-2565942|reactome:R-MMU-380259|reactome:R-MMU-380270|reactome:R-MMU-380284|reactome:R-MMU-380320|reactome:R-MMU-5620912|reactome:R-MMU-8854518|go:"GO:1904781"(positive regulation of protein localization to centrosome)|ensembl:ENSMUST00000094421(transcript)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0001750"(photoreceptor outer segment)|go:"GO:0001917"(photoreceptor inner segment)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008104"(protein localization)|go:"GO:0010457"(centriole-centriole cohesion)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030997"(regulation of centriole-centriole cohesion)|go:"GO:0031616"(spindle pole centrosome)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0036064"(ciliary basal body)|go:"GO:0048471"(perinuclear region of cytoplasm)|ensembl:ENSMUSG00000038241(gene)|go:"GO:0050908"(detection of light stimulus involved in visual perception)|entrezgene/locuslink:16328(identity) - - author-confidence:2.8562044486174156 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:LMBHPhbk4EoafGzfDA/pkR4gIYY10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q8BUZ3 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-9672746|ensembl:ENSMUSP00000052320 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:tigd4_mouse(display_long)|uniprotkb:Tigd4(gene name)|psi-mi:Tigd4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_997161.1|ensembl:ENSMUSG00000047819(gene)|ensembl:ENSMUST00000062623(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|interpro:IPR004875(CENP-B protein)|interpro:IPR006600(Centromere protein B, helix-turn-helix)|interpro:IPR007889(Helix-turn-helix, Psq)|interpro:IPR009057(Homeodomain-like)|entrezgene/locuslink:403175(identity) - - author-confidence:1.738070290368588 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:aJTTdBfPg6CM6pX8/jJtBx+SXsA10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q9JKV1 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-8762776|uniprotkb:Q3UKZ8|uniprotkb:Q8BPH8|uniprotkb:Q922A7|ensembl:ENSMUSP00000050076 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:adrm1_mouse(display_long)|uniprotkb:Adrm1(gene name)|psi-mi:Adrm1(display_short)|uniprotkb:Gp110(gene name synonym)|uniprotkb:110 kDa cell membrane glycoprotein(gene name synonym)|uniprotkb:Adhesion-regulating molecule 1(gene name synonym)|uniprotkb:Rpn13 homolog(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_062796.2|rcsb pdb:2R2Y|rcsb pdb:2Z59|reactome:R-MMU-5689603|reactome:R-MMU-5689880|ensembl:ENSMUSG00000039041(gene)|ensembl:ENSMUST00000061437(transcript)|go:"GO:0000502"(proteasome complex)|go:"GO:0001541"(ovarian follicle development)|go:"GO:0002020"(protease binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007286"(spermatid development)|go:"GO:0008541"(proteasome regulatory particle, lid subcomplex)|go:"GO:0033081"(regulation of T cell differentiation in thymus)|go:"GO:0042699"(follicle-stimulating hormone signaling pathway)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043248"(proteasome assembly)|go:"GO:0048477"(oogenesis)|go:"GO:0048538"(thymus development)|go:"GO:0060009"(Sertoli cell development)|go:"GO:0060399"(positive regulation of growth hormone receptor signaling pathway)|go:"GO:0060612"(adipose tissue development)|go:"GO:0061133"(endopeptidase activator activity)|go:"GO:0070628"(proteasome binding)|go:"GO:0072520"(seminiferous tubule development)|interpro:IPR006773(Adhesion regulating molecule)|interpro:IPR032368|interpro:IPR038108|interpro:IPR038633|interpro:IPR044867|interpro:IPR044868|dip:DIP-60625N|entrezgene/locuslink:56436(identity) - - author-confidence:3.39456533962611 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:Pq49mSSQ2aSkNE/UB63ORYtBOIc10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q6TYB5 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11568623|ensembl:ENSMUSP00000068987 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:fez2_mouse(display_long)|uniprotkb:Zygin II(gene name synonym)|uniprotkb:Zygin-2(gene name synonym)|uniprotkb:Fez2(gene name)|psi-mi:Fez2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_955519.1|ensembl:ENSMUSG00000056121(gene)|ensembl:ENSMUST00000070039(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0030424"(axon)|go:"GO:1902902"(negative regulation of autophagosome assembly)|interpro:IPR011680(FEZ-like)|interpro:IPR015641(Fasciculation and elongation protein zeta 2)|entrezgene/locuslink:225020(identity) - - author-confidence:38.27967277082712 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:RkcplM9P1AB1IioFXDahPZMj4vY10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:F8VQ72 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11568627|ensembl:ENSMUSP00000104890 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:f8vq72_mouse(display_long)|uniprotkb:Map3k1(gene name)|psi-mi:Map3k1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_036075.2|ensembl:ENSMUSG00000021754(gene)|ensembl:ENSMUST00000109267(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0008270"(zinc ion binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0071260"(cellular response to mechanical stimulus)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR007527(Zinc finger, SWIM-type)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|entrezgene/locuslink:26401(identity) - - author-confidence:151.2940475064216 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:cinvweEfJuVaqUbDiqbZSOkbNwA10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q7TME2 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-2551232|ensembl:ENSMUSP00000045286|uniprotkb:Q8CH61|uniprotkb:B1AQC8 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:spag5_mouse(display_long)|uniprotkb:Mastrin(gene name synonym)|uniprotkb:Mitotic spindle-associated protein p126(gene name synonym)|uniprotkb:Spag5(gene name)|psi-mi:Spag5(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) go:"GO:0036064"(ciliary basal body)|go:"GO:0051294"(establishment of spindle orientation)|go:"GO:0051301"(cell division)|go:"GO:0051988"(regulation of attachment of spindle microtubules to kinetochore)|go:"GO:0071539"(protein localization to centrosome)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090235"(regulation of metaphase plate congression)|go:"GO:0097431"(mitotic spindle pole)|go:"GO:1905832"(positive regulation of spindle assembly)|interpro:IPR028728|ensembl:ENSMUSG00000002055(gene)|ensembl:ENSMUST00000045026(transcript)|go:"GO:0000070"(mitotic sister chromatid segregation)|go:"GO:0000776"(kinetochore)|go:"GO:0005737"(cytoplasm)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0007051"(spindle organization)|go:"GO:0007059"(chromosome segregation)|go:"GO:0008017"(microtubule binding)|go:"GO:0016604"(nuclear body)|go:"GO:0030496"(midbody)|go:"GO:0032388"(positive regulation of intracellular transport)|go:"GO:0034451"(centriolar satellite)|go:"GO:0035253"(ciliary rootlet)|go:"GO:0035371"(microtubule plus-end)|refseq:NP_059103.1|entrezgene/locuslink:54141(identity) - - author-confidence:38.41212097411905 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:rWRtBlIeEsOudBt78Lgzu9Guw+U10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q504M8 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11567634|ensembl:ENSMUSP00000046089 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:rab26_mouse(display_long)|uniprotkb:Rab26(gene name)|psi-mi:Rab26(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_796349.1|ensembl:ENSMUSG00000079657(gene)|ensembl:ENSMUST00000035797(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019002"(GMP binding)|go:"GO:0030667"(secretory granule membrane)|go:"GO:0031226"(intrinsic component of plasma membrane)|go:"GO:0035272"(exocrine system development)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0099575"(regulation of protein catabolic process at presynapse, modulating synaptic transmission)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q504M8|reactome:R-MMU-8873719|entrezgene/locuslink:328778(identity) - - author-confidence:1.3000273107481182 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:rmv0KSaLCFvGxU4/FDCVBB2grVQ10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q8BGQ7 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11566807|uniprotkb:Q8BXR0|ensembl:ENSMUSP00000034441 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:syac_mouse(display_long)|uniprotkb:Aars1(gene name)|psi-mi:Aars1(display_short)|uniprotkb:Aars(gene name synonym)|uniprotkb:Alanyl-tRNA synthetase(gene name synonym)|uniprotkb:Protein sticky(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_666329.2|refseq:XP_006530984.1|refseq:XP_006530985.1|refseq:XP_006530987.1|ensembl:ENSMUSG00000031960(gene)|ensembl:ENSMUST00000034441(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0002161"(aminoacyl-tRNA editing activity)|go:"GO:0002196"("Ser-tRNA(Ala) hydrolase activity")|go:"GO:0004813"(alanine-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006400"(tRNA modification)|go:"GO:0006419"(alanyl-tRNA aminoacylation)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016597"(amino acid binding)|go:"GO:0021680"(cerebellar Purkinje cell layer development)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0045182"(translation regulator activity)|go:"GO:0050885"(neuromuscular process controlling balance)|go:"GO:0050905"(neuromuscular process)|go:"GO:0140018"(regulation of cytoplasmic translational fidelity)|interpro:IPR002318(Alanyl-tRNA synthetase, class IIc)|interpro:IPR003156(Phosphoesterase, DHHA1)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR012947(Threonyl/alanyl tRNA synthetase, SAD)|interpro:IPR018162|interpro:IPR018163|interpro:IPR018164|interpro:IPR018165|interpro:IPR023033|refseq:XP_017168237.1|entrezgene/locuslink:234734(identity) - - author-confidence:25.87809410248492 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:AAJaTdSOMiW18YTZiS1MbVDYX5Y10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q8R2Y3 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11568632|ensembl:ENSMUSP00000097792 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:dolk_mouse(display_long)|uniprotkb:Tmem15(gene name synonym)|uniprotkb:Transmembrane protein 15(gene name synonym)|uniprotkb:Dolk(gene name)|psi-mi:Dolk(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_808316.1|ensembl:ENSMUSG00000075419(gene)|ensembl:ENSMUST00000100219(transcript)|go:"GO:0004168"(dolichol kinase activity)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0043048"(dolichyl monophosphate biosynthetic process)|interpro:IPR026566|interpro:IPR032974|reactome:R-MMU-446199|entrezgene/locuslink:227697(identity) - - author-confidence:38.26360762487527 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:FrJ17gpJG4TcezJiLAIGbPwlUFQ10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:P97819 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11566856|uniprotkb:Q99LA9|uniprotkb:Q9JK61|ensembl:ENSMUSP00000134672 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:plpl9_mouse(display_long)|uniprotkb:2-lysophosphatidylcholine acylhydrolase(gene name synonym)|uniprotkb:Palmitoyl-CoA hydrolase(gene name synonym)|uniprotkb:Group VI phospholipase A2(gene name synonym)|uniprotkb:Intracellular membrane-associated calcium-independent phospholipase A2 beta(gene name synonym)|uniprotkb:Patatin-like phospholipase domain-containing protein 9(gene name synonym)|uniprotkb:Pnpla9(gene name synonym)|uniprotkb:Pla2g6(gene name)|psi-mi:Pla2g6(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_001185952.1|refseq:NP_001185953.1|refseq:NP_001185954.1|refseq:NP_058611.1|refseq:XP_006521215.1|refseq:XP_006521216.1|refseq:XP_006521217.1|refseq:XP_006521218.1|refseq:XP_006521219.1|refseq:XP_006521220.1|refseq:XP_006521221.1|refseq:XP_006521222.1|refseq:XP_006521223.1|ensembl:ENSMUSG00000042632(gene)|ensembl:ENSMUST00000174021(transcript)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0003847"(1-alkyl-2-acetylglycerophosphocholine esterase activity)|go:"GO:0004622"(lysophospholipase activity)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005615"(extracellular space)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006935"(chemotaxis)|go:"GO:0007204"(positive regulation of cytosolic calcium ion concentration)|go:"GO:0007613"(memory)|go:"GO:0014832"(urinary bladder smooth muscle contraction)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016290"(palmitoyl-CoA hydrolase activity)|go:"GO:0017171"(serine hydrolase activity)|go:"GO:0019731"(antibacterial humoral response)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031143"(pseudopodium)|go:"GO:0032049"(cardiolipin biosynthetic process)|go:"GO:0034451"(centriolar satellite)|go:"GO:0034638"(phosphatidylcholine catabolic process)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035774"(positive regulation of insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0035965"(cardiolipin acyl-chain remodeling)|go:"GO:0042311"(vasodilation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043008"(ATP-dependent protein binding)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0046338"(phosphatidylethanolamine catabolic process)|go:"GO:0046469"(platelet activating factor metabolic process)|go:"GO:0046473"(phosphatidic acid metabolic process)|go:"GO:0047499"(calcium-independent phospholipase A2 activity)|go:"GO:0051967"(negative regulation of synaptic transmission, glutamatergic)|go:"GO:0060135"(maternal process involved in female pregnancy)|go:"GO:0090037"(positive regulation of protein kinase C signaling)|go:"GO:0090200"(positive regulation of release of cytochrome c from mitochondria)|go:"GO:0090238"(positive regulation of arachidonic acid secretion)|go:"GO:0102545"(phosphatidyl phospholipase B activity)|go:"GO:0102567"|go:"GO:0102568"|go:"GO:0102991"(myristoyl-CoA hydrolase activity)|go:"GO:1901339"(regulation of store-operated calcium channel activity)|go:"GO:2000304"(positive regulation of ceramide biosynthetic process)|interpro:IPR002110(Ankyrin)|interpro:IPR002641(Patatin)|interpro:IPR016035(Acyl transferase/acyl hydrolase/lysophospholipase)|interpro:IPR020683|interpro:IPR036770|reactome:R-MMU-1482788|reactome:R-MMU-1482839|reactome:R-MMU-2029485|reactome:R-MMU-6811436|refseq:XP_017172187.1|entrezgene/locuslink:53357(identity) - - author-confidence:13.612355168246703 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:0KpCuPTxpld1rBYdVZPIjUKLPEQ10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q9JMI0 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11568663|uniprotkb:Q6PFG4|ensembl:ENSMUSP00000027463|ensembl:ENSMUSP00000125096|ensembl:ENSMUSP00000125557 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:ecel1_mouse(display_long)|uniprotkb:Damage-induced neuronal endopeptidase(gene name synonym)|uniprotkb:Dine(gene name synonym)|uniprotkb:Xce(gene name synonym)|uniprotkb:Xce protein(gene name synonym)|uniprotkb:Ecel1(gene name)|psi-mi:Ecel1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_001264854.1|refseq:NP_067281.2|ensembl:ENSMUSG00000026247(gene)|ensembl:ENSMUST00000027463(transcript)|ensembl:ENSMUST00000160810(transcript)|ensembl:ENSMUST00000161002(transcript)|go:"GO:0003016"(respiratory system process)|go:"GO:0004222"(metalloendopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0007218"(neuropeptide signaling pathway)|go:"GO:0016485"(protein processing)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0046872"(metal ion binding)|interpro:IPR000718(Peptidase M13, neprilysin)|interpro:IPR008753(Peptidase M13)|interpro:IPR018497|interpro:IPR024079|interpro:IPR029736|interpro:IPR042089|refseq:XP_017170387.1|refseq:XP_017170391.1|refseq:XP_017170392.1|entrezgene/locuslink:13599(identity) - - author-confidence:41.783124099682446 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:6HFNadjd7AsOh7eyH6RLqUHoTig10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q64008 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-9986497|uniprotkb:Q8BHJ0|uniprotkb:Q99P59|uniprotkb:Q99P90 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:rab34_mouse(display_long)|uniprotkb:Rab34(gene name)|psi-mi:Rab34(display_short)|uniprotkb:Rab39(gene name synonym)|uniprotkb:Rah(gene name synonym)|uniprotkb:Rah1(gene name synonym)|uniprotkb:Ras-related homolog(gene name synonym)|uniprotkb:Ras-related protein Rab-39(gene name synonym)|uniprotkb:Ras-related protein Rah(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) reactome:R-MMU-8873719|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0005929"(cilium)|go:"GO:0006897"(endocytosis)|go:"GO:0007041"(lysosomal transport)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030030"(cell projection organization)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031982"(vesicle)|go:"GO:0031985"(Golgi cisterna)|go:"GO:0032418"(lysosome localization)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045880"(positive regulation of smoothened signaling pathway)|go:"GO:0005770"(late endosome)|go:"GO:0050714"(positive regulation of protein secretion)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:0090385"(phagosome-lysosome fusion)|go:"GO:1900426"(positive regulation of defense response to bacterium)|go:"GO:1905171"(positive regulation of protein localization to phagocytic vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR027417|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|refseq:NP_001152954.1|refseq:NP_258436.2|entrezgene/locuslink:19376(identity) - - author-confidence:4.424876700004819 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:BBB9N/zuCY5aiJ1YDRDJLFB8mgQ10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHC1 uniprotkb:Q8K330 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 intact:EBI-11568599|uniprotkb:Q3UDX0|ensembl:ENSMUSP00000047718 psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:ssh3_mouse(display_long)|uniprotkb:SSH-like protein 3(gene name synonym)|uniprotkb:Ssh3l(gene name synonym)|uniprotkb:Ssh3(gene name)|psi-mi:Ssh3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568621|imex:IM-24977-33 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) refseq:NP_932781.1|ensembl:ENSMUSG00000034616(gene)|ensembl:ENSMUST00000037992(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0004721"(phosphoprotein phosphatase activity)|go:"GO:0004725"(protein tyrosine phosphatase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005856"(cytoskeleton)|go:"GO:0008138"(protein tyrosine/serine/threonine phosphatase activity)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030837"(negative regulation of actin filament polymerization)|go:"GO:0106306"|go:"GO:0106307"|interpro:IPR000340(Protein-tyrosine phosphatase, dual specificity)|interpro:IPR000387(Protein-tyrosine phosphatase)|interpro:IPR014876(DEK C terminal)|interpro:IPR016130(Protein-tyrosine phosphatase, active site)|interpro:IPR020422|interpro:IPR029021|interpro:IPR043587|entrezgene/locuslink:245857(identity) - - author-confidence:41.37364137953193 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2018/07/05 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 rogid:oa2BJ6ZfSz+1LcOeV0UZ470tm7w10090 intact-crc:7A7E9C48F4916B7D|rigid:UCvFKTNjD8R5ouLI5QZWs43nb5o false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHH2 uniprotkb:P51150 intact:EBI-11568845|ensembl:ENSMUSP00000049739 intact:EBI-8321380|intact:MINT-1864693|ensembl:ENSMUSP00000092658|ensembl:ENSMUSP00000109226|ensembl:ENSMUSP00000109227|ensembl:ENSMUSP00000109228|ensembl:ENSMUSP00000109230 psi-mi:rab9b_mouse(display_long)|uniprotkb:Rab9b(gene name)|psi-mi:Rab9b(display_short) psi-mi:rab7a_mouse(display_long)|uniprotkb:Rab7a(gene name)|psi-mi:Rab7a(display_short)|uniprotkb:Rab7(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568839|imex:IM-24977-34 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_795945.1|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|ensembl:ENSMUSG00000043463(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|ensembl:ENSMUST00000058814(transcript)|go:"GO:0019003"(GDP binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0045335"(phagocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041824|reactome:R-MMU-6798695|reactome:R-MMU-6811440|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-9706019|dip:DIP-61069N|entrezgene/locuslink:319642(identity) refseq:NP_001280581.1|refseq:NP_001280582.1|refseq:NP_001280583.1|refseq:NP_001280584.1|refseq:NP_033031.2|dip:DIP-60513N|reactome:R-MMU-9013149|reactome:R-MMU-9013404|reactome:R-MMU-9013405|reactome:R-MMU-9013406|reactome:R-MMU-9013407|reactome:R-MMU-9013408|reactome:R-MMU-9013423|reactome:R-MMU-9035034|reactome:R-MMU-9013148|ensembl:ENSMUSG00000079477(gene)|ensembl:ENSMUST00000095048(transcript)|ensembl:ENSMUST00000113596(transcript)|ensembl:ENSMUST00000113597(transcript)|ensembl:ENSMUST00000113598(transcript)|ensembl:ENSMUST00000113600(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005829"(cytosol)|go:"GO:0006622"(protein targeting to lysosome)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007174"(epidermal growth factor catabolic process)|go:"GO:0008333"(endosome to lysosome transport)|go:"GO:0010008"(endosome membrane)|go:"GO:0016042"(lipid catabolic process)|go:"GO:0019003"(GDP binding)|go:"GO:0019076"(viral release from host cell)|go:"GO:0022615"(protein to membrane docking)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031902"(late endosome membrane)|go:"GO:0032419"(extrinsic component of lysosome membrane)|go:"GO:0033162"(melanosome membrane)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045453"(bone resorption)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0048524"(positive regulation of viral process)|go:"GO:0051650"(establishment of vesicle localization)|go:"GO:0061724"(lipophagy)|go:"GO:0090383"(phagosome acidification)|go:"GO:0090385"(phagosome-lysosome fusion)|go:"GO:0097208"(alveolar lamellar body)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0099638"(endosome to plasma membrane protein transport)|go:"GO:1903542"(negative regulation of exosomal secretion)|go:"GO:1903543"(positive regulation of exosomal secretion)|go:"GO:1905394"(retromer complex binding)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P51150|rcsb pdb:5Z2M|reactome:R-MMU-2132295|reactome:R-MMU-6798695|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19349(identity) - - comment:mint|function:"Involved in late endocytic transport. Contributes to the maturation of phagosomes (acidification)"|author-confidence:84.31881103639826 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:7w43PGrqcesZhOrWlLYfjmYygGg10090 rogid:AJbKizzw4zCAn+roRF2Im1Tt4xE10090 intact-crc:D180C0AEDB672430|rigid:aDEGBRH3afRW7d4fEPseRxLNKj4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHH2 uniprotkb:Q9D0P5 intact:EBI-11568845|ensembl:ENSMUSP00000049739 intact:EBI-8607760|ensembl:ENSMUSP00000044368|intact:MINT-8177753 psi-mi:rab9b_mouse(display_long)|uniprotkb:Rab9b(gene name)|psi-mi:Rab9b(display_short) psi-mi:pygo1_mouse(display_long)|uniprotkb:Pygo1(gene name)|psi-mi:Pygo1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568839|imex:IM-24977-34 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_795945.1|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|ensembl:ENSMUSG00000043463(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|ensembl:ENSMUST00000058814(transcript)|go:"GO:0019003"(GDP binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0045335"(phagocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041824|reactome:R-MMU-6798695|reactome:R-MMU-6811440|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-9706019|dip:DIP-61069N|entrezgene/locuslink:319642(identity) ensembl:ENSMUSG00000034910(gene)|ensembl:ENSMUST00000038489(transcript)|go:"GO:0001822"(kidney development)|go:"GO:0002244"(hematopoietic progenitor cell differentiation)|go:"GO:0005634"(nucleus)|go:"GO:0007286"(spermatid development)|go:"GO:0007289"(spermatid nucleus differentiation)|go:"GO:0034504"(protein localization to nucleus)|go:"GO:0035064"(methylated histone binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0048856"(anatomical structure development)|go:"GO:0060070"(canonical Wnt signaling pathway)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019787|rcsb pdb:2DX8|rcsb pdb:2YYR|reactome:R-MMU-201722|interpro:IPR019786|refseq:NP_082392.1|entrezgene/locuslink:72135(identity) - - comment:mint|author-confidence:2.108282653747909 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:7w43PGrqcesZhOrWlLYfjmYygGg10090 rogid:VcuyU94M5VkU3ooZ8t9278flbd410090 intact-crc:D180C0AEDB672430|rigid:aDEGBRH3afRW7d4fEPseRxLNKj4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHH2 uniprotkb:Q9Z179 intact:EBI-11568845|ensembl:ENSMUSP00000049739 intact:EBI-644352|uniprotkb:Q3UED9|uniprotkb:Q3UMD9|ensembl:ENSMUSP00000022945 psi-mi:rab9b_mouse(display_long)|uniprotkb:Rab9b(gene name)|psi-mi:Rab9b(display_short) psi-mi:shcbp_mouse(display_long)|uniprotkb:Protein expressed in activated lymphocytes(gene name synonym)|uniprotkb:SHC-binding protein(gene name synonym)|uniprotkb:Shcbp1(gene name)|psi-mi:Shcbp1(display_short)|uniprotkb:Pal(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568839|imex:IM-24977-34 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_795945.1|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|ensembl:ENSMUSG00000043463(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|ensembl:ENSMUST00000058814(transcript)|go:"GO:0019003"(GDP binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0045335"(phagocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041824|reactome:R-MMU-6798695|reactome:R-MMU-6811440|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-9706019|dip:DIP-61069N|entrezgene/locuslink:319642(identity) refseq:NP_035499.1|ensembl:ENSMUSG00000022322(gene)|ensembl:ENSMUST00000022945(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005819"(spindle)|go:"GO:0008543"(fibroblast growth factor receptor signaling pathway)|go:"GO:0030496"(midbody)|go:"GO:0042169"(SH2 domain binding)|go:"GO:2000177"(regulation of neural precursor cell proliferation)|interpro:IPR006626(Parallel beta-helix repeat)|interpro:IPR011050(Pectin lyase fold/virulence factor)|interpro:IPR012334(Pectin lyase fold)|interpro:IPR039448|entrezgene/locuslink:20419(identity) - - author-confidence:5.054808922939065 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:7w43PGrqcesZhOrWlLYfjmYygGg10090 rogid:MgcPGnEzLfUPCtS+m+6NJ4Yyr2k10090 intact-crc:D180C0AEDB672430|rigid:aDEGBRH3afRW7d4fEPseRxLNKj4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHH2 uniprotkb:P97313 intact:EBI-11568845|ensembl:ENSMUSP00000049739 intact:EBI-2272005|uniprotkb:E9QN15|uniprotkb:O88187|uniprotkb:P97928|uniprotkb:Q307W9|uniprotkb:Q3V2W8|uniprotkb:Q8C2A7|uniprotkb:Q9Z341|ensembl:ENSMUSP00000023352 psi-mi:rab9b_mouse(display_long)|uniprotkb:Rab9b(gene name)|psi-mi:Rab9b(display_short) psi-mi:prkdc_mouse(display_long)|uniprotkb:Prkdc(gene name)|psi-mi:Prkdc(display_short)|uniprotkb:Xrcc7(gene name synonym)|uniprotkb:p460(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568839|imex:IM-24977-34 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_795945.1|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|ensembl:ENSMUSG00000043463(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|ensembl:ENSMUST00000058814(transcript)|go:"GO:0019003"(GDP binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0045335"(phagocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041824|reactome:R-MMU-6798695|reactome:R-MMU-6811440|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-9706019|dip:DIP-61069N|entrezgene/locuslink:319642(identity) refseq:NP_035289.2|ensembl:ENSMUSG00000022672(gene)|ensembl:ENSMUST00000023352(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000723"(telomere maintenance)|go:"GO:0001756"(somitogenesis)|go:"GO:0001933"(negative regulation of protein phosphorylation)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0002326"(B cell lineage commitment)|go:"GO:0002328"(pro-B cell differentiation)|go:"GO:0002360"(T cell lineage commitment)|go:"GO:0002638"(negative regulation of immunoglobulin production)|go:"GO:0002684"(positive regulation of immune system process)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004677"(DNA-dependent protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005958"(DNA-dependent protein kinase-DNA ligase 4 complex)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007420"(brain development)|go:"GO:0007507"(heart development)|go:"GO:0008630"(intrinsic apoptotic signaling pathway in response to DNA damage)|go:"GO:0010212"(response to ionizing radiation)|go:"GO:0010332"(response to gamma radiation)|go:"GO:0014823"(response to activity)|go:"GO:0016233"(telomere capping)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019899"(enzyme binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030098"(lymphocyte differentiation)|go:"GO:0031571"(mitotic G1 DNA damage checkpoint signaling)|go:"GO:0031648"(protein destabilization)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032991"(protein-containing complex)|go:"GO:0032993"(protein-DNA complex)|go:"GO:0033077"(T cell differentiation in thymus)|go:"GO:0033151"("V(D)J recombination")|go:"GO:0033152"("immunoglobulin V(D)J recombination")|go:"GO:0033153"("T cell receptor V(D)J recombination")|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0035234"(ectopic germ cell programmed cell death)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0045087"(innate immune response)|go:"GO:0045621"(positive regulation of lymphocyte differentiation)|go:"GO:0045648"(positive regulation of erythrocyte differentiation)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048146"(positive regulation of fibroblast proliferation)|go:"GO:0048511"(rhythmic process)|go:"GO:0048536"(spleen development)|go:"GO:0048538"(thymus development)|go:"GO:0048639"(positive regulation of developmental growth)|go:"GO:0048660"(regulation of smooth muscle cell proliferation)|go:"GO:0050678"(regulation of epithelial cell proliferation)|go:"GO:0070419"(nonhomologous end joining complex)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1902036"(regulation of hematopoietic stem cell differentiation)|go:"GO:1905221"(positive regulation of platelet formation)|go:"GO:2000773"(negative regulation of cellular senescence)|go:"GO:2001034"(positive regulation of double-strand break repair via nonhomologous end joining)|go:"GO:2001229"(negative regulation of response to gamma radiation)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR003151(PIK-related kinase, FAT)|interpro:IPR003152(PIK-related kinase, FATC)|interpro:IPR011009(Protein kinase-like)|interpro:IPR012582(NUC194)|interpro:IPR014009(PIK-related kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR036940|interpro:IPR037706|mint:P97313|reactome:R-MMU-5693571|reactome:R-MMU-8866654|entrezgene/locuslink:19090(identity) - - author-confidence:1.5615321865199145 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:7w43PGrqcesZhOrWlLYfjmYygGg10090 rogid:CE0UDetYkRmQdIxj+xDjU3hYpzo10090 intact-crc:D180C0AEDB672430|rigid:aDEGBRH3afRW7d4fEPseRxLNKj4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHH2 uniprotkb:B2RXR6 intact:EBI-11568845|ensembl:ENSMUSP00000049739 intact:EBI-11566298|uniprotkb:B2RXN6|uniprotkb:B7ZWK8|ensembl:ENSMUSP00000137616 psi-mi:rab9b_mouse(display_long)|uniprotkb:Rab9b(gene name)|psi-mi:Rab9b(display_short) psi-mi:anr44_mouse(display_long)|uniprotkb:Ankyrin repeat domain-containing protein 44(gene name synonym)|uniprotkb:Ankrd44(gene name)|psi-mi:Ankrd44(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568839|imex:IM-24977-34 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_795945.1|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|ensembl:ENSMUSG00000043463(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|ensembl:ENSMUST00000058814(transcript)|go:"GO:0019003"(GDP binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0045335"(phagocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041824|reactome:R-MMU-6798695|reactome:R-MMU-6811440|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-9706019|dip:DIP-61069N|entrezgene/locuslink:319642(identity) refseq:NP_001074902.2|ensembl:ENSMUSG00000052331(gene)|ensembl:ENSMUST00000179030(transcript)|interpro:IPR002110(Ankyrin)|interpro:IPR020683|interpro:IPR036770|entrezgene/locuslink:329154(identity) - - author-confidence:1.5808103616621356 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:7w43PGrqcesZhOrWlLYfjmYygGg10090 rogid:u2gh8Mr3OLcC72DfwHC0bMCFj3c10090 intact-crc:D180C0AEDB672430|rigid:aDEGBRH3afRW7d4fEPseRxLNKj4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHH2 uniprotkb:O08807 intact:EBI-11568845|ensembl:ENSMUSP00000049739 intact:EBI-494652|uniprotkb:Q3U8E4|uniprotkb:B1AZS7|ensembl:ENSMUSP00000026328 psi-mi:rab9b_mouse(display_long)|uniprotkb:Rab9b(gene name)|psi-mi:Rab9b(display_short) psi-mi:prdx4_mouse(display_long)|uniprotkb:Peroxiredoxin IV(gene name synonym)|uniprotkb:Thioredoxin peroxidase AO372(gene name synonym)|uniprotkb:Thioredoxin-dependent peroxide reductase A0372(gene name synonym)|uniprotkb:Antioxidant enzyme AOE372(gene name synonym)|uniprotkb:Thioredoxin-dependent peroxiredoxin 4(gene name synonym)|uniprotkb:Prdx4(gene name)|psi-mi:Prdx4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568839|imex:IM-24977-34 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_795945.1|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|ensembl:ENSMUSG00000043463(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|ensembl:ENSMUST00000058814(transcript)|go:"GO:0019003"(GDP binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0045335"(phagocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041824|reactome:R-MMU-6798695|reactome:R-MMU-6811440|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-9706019|dip:DIP-61069N|entrezgene/locuslink:319642(identity) refseq:NP_058044.1|refseq:NP_001300640.1|dip:DIP-34137N|ensembl:ENSMUSG00000025289(gene)|ensembl:ENSMUST00000026328(transcript)|go:"GO:0004601"(peroxidase activity)|go:"GO:0005615"(extracellular space)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005790"(smooth endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008584"(male gonad development)|go:"GO:0018401"(peptidyl-proline hydroxylation to 4-hydroxy-L-proline)|go:"GO:0022417"(protein maturation by protein folding)|go:"GO:0030198"(extracellular matrix organization)|go:"GO:0042802"(identical protein binding)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0051920"(peroxiredoxin activity)|go:"GO:0072593"(reactive oxygen species metabolic process)|go:"GO:2000255"(negative regulation of male germ cell proliferation)|interpro:IPR000866(Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen)|interpro:IPR013766(Thioredoxin domain)|interpro:IPR019479|interpro:IPR036249|mint:O08807|rcsb pdb:3VWU|rcsb pdb:3VWV|rcsb pdb:3W8J|rcsb pdb:3WGX|reactome:R-MMU-6798695|entrezgene/locuslink:53381(identity) - - author-confidence:8.170019224624655 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:7w43PGrqcesZhOrWlLYfjmYygGg10090 rogid:86EzEedrO6v5Z2dnSB2fSPaV2hc10090 intact-crc:D180C0AEDB672430|rigid:aDEGBRH3afRW7d4fEPseRxLNKj4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHH2 uniprotkb:Q9WUU8 intact:EBI-11568845|ensembl:ENSMUSP00000049739 intact:EBI-6126152|uniprotkb:Q922A9|uniprotkb:Q922F7|uniprotkb:Q9EPP8|uniprotkb:Q9R0X3 psi-mi:rab9b_mouse(display_long)|uniprotkb:Rab9b(gene name)|psi-mi:Rab9b(display_short) psi-mi:tnip1_mouse(display_long)|uniprotkb:Tnip1(gene name)|psi-mi:Tnip1(display_short)|uniprotkb:Abin(gene name synonym)|uniprotkb:Naf1(gene name synonym)|uniprotkb:Nef-associated factor 1(gene name synonym)|uniprotkb:Virion-associated nuclear shuttling protein(gene name synonym)|uniprotkb:A20-binding inhibitor of NF-kappa-B activation 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568839|imex:IM-24977-34 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_795945.1|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|ensembl:ENSMUSG00000043463(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|ensembl:ENSMUST00000058814(transcript)|go:"GO:0019003"(GDP binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0045335"(phagocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041824|reactome:R-MMU-6798695|reactome:R-MMU-6811440|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-9706019|dip:DIP-61069N|entrezgene/locuslink:319642(identity) refseq:XP_011247465.1|refseq:XP_006533910.1|refseq:NP_001186205.1|refseq:NP_001258384.1|reactome:R-MMU-5689896|dip:DIP-59199N|go:"GO:0002755"(MyD88-dependent toll-like receptor signaling pathway)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006954"(inflammatory response)|go:"GO:0007159"(leukocyte cell-cell adhesion)|go:"GO:0009101"(glycoprotein biosynthetic process)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043124"(negative regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050729"(positive regulation of inflammatory response)|go:"GO:0051019"(mitogen-activated protein kinase binding)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0085032"(modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade)|go:"GO:1903003"(positive regulation of protein deubiquitination)|interpro:IPR033372|rcsb pdb:6N5M|rcsb pdb:6N6R|rcsb pdb:6N6S|entrezgene/locuslink:57783(identity) - - author-confidence:5.478036267959494 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:7w43PGrqcesZhOrWlLYfjmYygGg10090 rogid:3vIAOz/0YAeFIFZUB4k0VUYlvd810090 intact-crc:D180C0AEDB672430|rigid:aDEGBRH3afRW7d4fEPseRxLNKj4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHH2 uniprotkb:Q7M710 intact:EBI-11568845|ensembl:ENSMUSP00000049739 intact:EBI-11568841|ensembl:ENSMUSP00000075483 psi-mi:rab9b_mouse(display_long)|uniprotkb:Rab9b(gene name)|psi-mi:Rab9b(display_short) psi-mi:tr125_mouse(display_long)|uniprotkb:T2r59(gene name synonym)|uniprotkb:Tas2r125(gene name)|psi-mi:Tas2r125(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568839|imex:IM-24977-34 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_795945.1|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|ensembl:ENSMUSG00000043463(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|ensembl:ENSMUST00000058814(transcript)|go:"GO:0019003"(GDP binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0045335"(phagocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041824|reactome:R-MMU-6798695|reactome:R-MMU-6811440|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-9706019|dip:DIP-61069N|entrezgene/locuslink:319642(identity) refseq:NP_996910.1|ensembl:ENSMUSG00000059410(gene)|ensembl:ENSMUST00000076119(transcript)|go:"GO:0001580"(detection of chemical stimulus involved in sensory perception of bitter taste)|go:"GO:0004930"(G protein-coupled receptor activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0033038"(bitter taste receptor activity)|interpro:IPR007960(Mammalian taste receptor)|interpro:IPR017452(GPCR, rhodopsin-like superfamily)|entrezgene/locuslink:387352(identity) - - author-confidence:63.3614711389653 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:7w43PGrqcesZhOrWlLYfjmYygGg10090 rogid:GWZPY3GQ4VukA/Cc2vDOX5+0CII10090 intact-crc:D180C0AEDB672430|rigid:aDEGBRH3afRW7d4fEPseRxLNKj4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BHH2 uniprotkb:Q6P1E1 intact:EBI-11568845|ensembl:ENSMUSP00000049739 intact:EBI-647033|uniprotkb:Q6PDK9|uniprotkb:Q6PF85|uniprotkb:Q8BW47|ensembl:ENSMUSP00000124863 psi-mi:rab9b_mouse(display_long)|uniprotkb:Rab9b(gene name)|psi-mi:Rab9b(display_short) psi-mi:zmiz1_mouse(display_long)|uniprotkb:Retinoic acid-induced protein 17(gene name synonym)|uniprotkb:PIAS-like protein Zimp10(gene name synonym)|uniprotkb:Zmiz1(gene name)|psi-mi:Zmiz1(display_short)|uniprotkb:Zimp10(gene name synonym)|uniprotkb:Rai17(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568839|imex:IM-24977-34 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_795945.1|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|ensembl:ENSMUSG00000043463(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|ensembl:ENSMUST00000058814(transcript)|go:"GO:0019003"(GDP binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0045335"(phagocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041824|reactome:R-MMU-6798695|reactome:R-MMU-6811440|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-9706019|dip:DIP-61069N|entrezgene/locuslink:319642(identity) refseq:NP_899031.2|refseq:NP_001297595.1|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007179"(transforming growth factor beta receptor signaling pathway)|go:"GO:0007296"(vitellogenesis)|go:"GO:0007569"(cell aging)|go:"GO:0008270"(zinc ion binding)|go:"GO:0021852"(pyramidal neuron migration to cerebral cortex)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0030521"(androgen receptor signaling pathway)|go:"GO:0033233"(regulation of protein sumoylation)|go:"GO:0045582"(positive regulation of T cell differentiation)|go:"GO:0045747"(positive regulation of Notch signaling pathway)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046332"(SMAD binding)|go:"GO:0048096"|go:"GO:0048146"(positive regulation of fibroblast proliferation)|go:"GO:0048589"(developmental growth)|go:"GO:0048844"(artery morphogenesis)|go:"GO:0060395"(SMAD protein signal transduction)|go:"GO:1903508"(positive regulation of nucleic acid-templated transcription)|interpro:IPR004181(Zinc finger, MIZ-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR040797|go:"GO:0005737"(cytoplasm)|ensembl:ENSMUSG00000007817(gene)|ensembl:ENSMUST00000162645(transcript)|go:"GO:0001570"(vasculogenesis)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0003007"(heart morphogenesis)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|entrezgene/locuslink:328365(identity) - - author-confidence:1.2350527204539652 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:7w43PGrqcesZhOrWlLYfjmYygGg10090 rogid:YDCZA1JO5KiYFqN/y8VMYNLfUTA10090 intact-crc:D180C0AEDB672430|rigid:aDEGBRH3afRW7d4fEPseRxLNKj4 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8CAM5 uniprotkb:Q8K4L3 intact:EBI-11568902|ensembl:ENSMUSP00000119399|ensembl:ENSMUSP00000121693|ensembl:ENSMUSP00000157124 intact:EBI-8401679|intact:MINT-4136191|uniprotkb:E9Q983|ensembl:ENSMUSP00000025079|ensembl:ENSMUSP00000115078|ensembl:ENSMUSP00000119803 psi-mi:rab36_mouse(display_long)|uniprotkb:Rab36(gene name)|psi-mi:Rab36(display_short) psi-mi:svil_mouse(display_long)|uniprotkb:Svil(gene name)|psi-mi:Svil(display_short)|uniprotkb:Archvillin(gene name synonym)|uniprotkb:p205/p250(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568900|imex:IM-24977-35 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_084057.1|refseq:XP_006514349.1|refseq:XP_006514350.1|refseq:XP_006514351.1|refseq:XP_006514352.1|refseq:XP_006514353.1|refseq:XP_006514354.1|refseq:XP_011241901.1|ensembl:ENSMUSG00000020175(gene)|ensembl:ENSMUST00000146440(transcript)|ensembl:ENSMUST00000147802(transcript)|ensembl:ENSMUST00000234625(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0015031"(protein transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-6811438|reactome:R-MMU-8873719|entrezgene/locuslink:76877(identity) refseq:XP_011245180.1|refseq:NP_694793.1|refseq:NP_001334378.1|ensembl:ENSMUSG00000024236(gene)|ensembl:ENSMUST00000025079(transcript)|ensembl:ENSMUST00000126977(transcript)|ensembl:ENSMUST00000140448(transcript)|go:"GO:0002102"(podosome)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0007519"(skeletal muscle tissue development)|go:"GO:0008154"(actin polymerization or depolymerization)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0030496"(midbody)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032467"(positive regulation of cytokinesis)|go:"GO:0036449"(microtubule minus-end)|go:"GO:0042995"(cell projection)|go:"GO:0043034"(costamere)|go:"GO:0051014"(actin filament severing)|go:"GO:0051015"(actin filament binding)|go:"GO:0051016"(barbed-end actin filament capping)|interpro:IPR003128(Villin headpiece)|interpro:IPR007122(Gelsolin)|interpro:IPR007123(Gelsolin region)|interpro:IPR015628(Supervillin)|interpro:IPR029006|interpro:IPR036886|mint:Q8K4L3|go:"GO:0030054"(cell junction)|entrezgene/locuslink:225115(identity) - - comment:mint|function:"Forms a high-affinity link between the actin cytoskeleton and the membrane. Isoform 2 (archvillin) is among the first costameric proteins to assemble during myogenesis and it contributes to myogenic membrane structure and differentiation"|author-confidence:5.879486415134081 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:noP+gvoMAILVG+StoX6sR8Ihx0s10090 rogid:KG5cW2QzOc2/WKKunit3VmhpkYY10090 intact-crc:E9D1B8F381E363EE|rigid:kDNJy1QA2UNtOOd1qeFwABLlz2Q false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8CAM5 uniprotkb:Q6ZPJ3 intact:EBI-11568902|ensembl:ENSMUSP00000119399|ensembl:ENSMUSP00000121693|ensembl:ENSMUSP00000157124 intact:EBI-6999453|ensembl:ENSMUSP00000080791|intact:MINT-7034165|uniprotkb:Q60800|uniprotkb:A2A7X3|uniprotkb:Q7TPN2|uniprotkb:Q8BLE8|uniprotkb:Q6PCR9 psi-mi:rab36_mouse(display_long)|uniprotkb:Rab36(gene name)|psi-mi:Rab36(display_short) psi-mi:ube2o_mouse(display_long)|uniprotkb:E2/E3 hybrid ubiquitin-protein ligase UBE2O(gene name synonym)|uniprotkb:Ube2o(gene name)|psi-mi:Ube2o(display_short)|uniprotkb:Kiaa1734(gene name synonym)|uniprotkb:Ubiquitin-protein ligase O(gene name synonym)|uniprotkb:Ubiquitin carrier protein O(gene name synonym)|uniprotkb:Ubiquitin-conjugating enzyme E2 of 230 kDa(gene name synonym)|uniprotkb:Ubiquitin-conjugating enzyme E2 O(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568900|imex:IM-24977-35 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_084057.1|refseq:XP_006514349.1|refseq:XP_006514350.1|refseq:XP_006514351.1|refseq:XP_006514352.1|refseq:XP_006514353.1|refseq:XP_006514354.1|refseq:XP_011241901.1|ensembl:ENSMUSG00000020175(gene)|ensembl:ENSMUST00000146440(transcript)|ensembl:ENSMUST00000147802(transcript)|ensembl:ENSMUST00000234625(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0015031"(protein transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-6811438|reactome:R-MMU-8873719|entrezgene/locuslink:76877(identity) ensembl:ENSMUSG00000020802(gene)|ensembl:ENSMUST00000082152(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0004869"(cysteine-type endopeptidase inhibitor activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006513"(protein monoubiquitination)|go:"GO:0016604"(nuclear body)|go:"GO:0030513"(positive regulation of BMP signaling pathway)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0061631"(ubiquitin conjugating enzyme activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|interpro:IPR016135(Ubiquitin-conjugating enzyme/RWD-like)|mint:Q6ZPJ3|reactome:R-MMU-983168|interpro:IPR000608(Ubiquitin-conjugating enzyme, E2)|refseq:NP_776116.2|entrezgene/locuslink:217342(identity) - - comment:mint|author-confidence:16.77165537048904 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:noP+gvoMAILVG+StoX6sR8Ihx0s10090 rogid:7DrbsONnQCbVgpH24alvrdtoyJg10090 intact-crc:E9D1B8F381E363EE|rigid:kDNJy1QA2UNtOOd1qeFwABLlz2Q false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8CAM5 uniprotkb:Q9D666 intact:EBI-11568902|ensembl:ENSMUSP00000119399|ensembl:ENSMUSP00000121693|ensembl:ENSMUSP00000157124 intact:EBI-6752574|ensembl:ENSMUSP00000056655|uniprotkb:Q3TIW3|uniprotkb:Q3TV96|uniprotkb:Q6B4H0|uniprotkb:Q80SU8|uniprotkb:Q8BZ99|uniprotkb:Q99P23|uniprotkb:D3Z0V9 psi-mi:rab36_mouse(display_long)|uniprotkb:Rab36(gene name)|psi-mi:Rab36(display_short) psi-mi:sun1_mouse(display_long)|uniprotkb:Sun1(gene name)|psi-mi:Sun1(display_short)|uniprotkb:Unc84a(gene name synonym)|uniprotkb:Protein unc-84 homolog A(gene name synonym)|uniprotkb:Sad1/unc-84 protein-like 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568900|imex:IM-24977-35 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_084057.1|refseq:XP_006514349.1|refseq:XP_006514350.1|refseq:XP_006514351.1|refseq:XP_006514352.1|refseq:XP_006514353.1|refseq:XP_006514354.1|refseq:XP_011241901.1|ensembl:ENSMUSG00000020175(gene)|ensembl:ENSMUST00000146440(transcript)|ensembl:ENSMUST00000147802(transcript)|ensembl:ENSMUST00000234625(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0015031"(protein transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-6811438|reactome:R-MMU-8873719|entrezgene/locuslink:76877(identity) ensembl:ENSMUSG00000036817(gene)|ensembl:ENSMUST00000058716(transcript)|go:"GO:0001503"(ossification)|go:"GO:0002081"(outer acrosomal membrane)|go:"GO:0005521"(lamin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005639"(integral component of nuclear inner membrane)|go:"GO:0005737"(cytoplasm)|go:"GO:0006998"(nuclear envelope organization)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0007283"(spermatogenesis)|go:"GO:0009612"(response to mechanical stimulus)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034993"(meiotic nuclear membrane microtubule tethering complex)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043495"(protein-membrane adaptor activity)|go:"GO:0051642"(centrosome localization)|go:"GO:0070197"(meiotic attachment of telomere to nuclear envelope)|go:"GO:0090292"(nuclear matrix anchoring at nuclear membrane)|go:"GO:0140444"(cytoskeleton-nuclear membrane anchor activity)|interpro:IPR012919(Sad1/UNC-like, C-terminal)|interpro:IPR018539|interpro:IPR032680|interpro:IPR040994|mint:Q9D666|rcsb pdb:5YWZ|go:"GO:0021817"(nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration)|refseq:NP_001243044.1|refseq:NP_001243045.1|refseq:NP_001243046.1|refseq:NP_001243047.1|refseq:NP_077771.1|dip:DIP-60732N|entrezgene/locuslink:77053(identity) - - author-confidence:259.22665957420224 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:noP+gvoMAILVG+StoX6sR8Ihx0s10090 rogid:GqqeG7DaPNhq8uKIbPelHOotEok10090 intact-crc:E9D1B8F381E363EE|rigid:kDNJy1QA2UNtOOd1qeFwABLlz2Q false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8CAM5 uniprotkb:Q9JKF7 intact:EBI-11568902|ensembl:ENSMUSP00000119399|ensembl:ENSMUSP00000121693|ensembl:ENSMUSP00000157124 intact:EBI-11568906|uniprotkb:Q91YK5|uniprotkb:Q9D8U5|uniprotkb:A6X954|ensembl:ENSMUSP00000112283 psi-mi:rab36_mouse(display_long)|uniprotkb:Rab36(gene name)|psi-mi:Rab36(display_short) psi-mi:rm39_mouse(display_long)|uniprotkb:Mrpl39(gene name)|psi-mi:Mrpl39(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568900|imex:IM-24977-35 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_084057.1|refseq:XP_006514349.1|refseq:XP_006514350.1|refseq:XP_006514351.1|refseq:XP_006514352.1|refseq:XP_006514353.1|refseq:XP_006514354.1|refseq:XP_011241901.1|ensembl:ENSMUSG00000020175(gene)|ensembl:ENSMUST00000146440(transcript)|ensembl:ENSMUST00000147802(transcript)|ensembl:ENSMUST00000234625(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0015031"(protein transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-6811438|reactome:R-MMU-8873719|entrezgene/locuslink:76877(identity) refseq:NP_059100.3|ensembl:ENSMUSG00000022889(gene)|ensembl:ENSMUST00000116584(transcript)|go:"GO:0000002"(mitochondrial genome maintenance)|go:"GO:0000166"(nucleotide binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005739"(mitochondrion)|go:"GO:0005762"(mitochondrial large ribosomal subunit)|go:"GO:0006412"(translation)|interpro:IPR004095(TGS)|interpro:IPR012675(Beta-grasp fold, ferredoxin-type)|interpro:IPR012676(TGS-like)|interpro:IPR018163|reactome:R-MMU-5389840|reactome:R-MMU-5419276|entrezgene/locuslink:27393(identity) - - author-confidence:9.465940998073966 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:noP+gvoMAILVG+StoX6sR8Ihx0s10090 rogid:iWeKLfTaSNd3tKx3NkT2k/H6JPQ10090 intact-crc:E9D1B8F381E363EE|rigid:kDNJy1QA2UNtOOd1qeFwABLlz2Q false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8CAM5 uniprotkb:Q69ZK0 intact:EBI-11568902|ensembl:ENSMUSP00000119399|ensembl:ENSMUSP00000121693|ensembl:ENSMUSP00000157124 intact:EBI-645862|uniprotkb:A2A5U1|uniprotkb:Q6PFD4|uniprotkb:Q8BN08|ensembl:ENSMUSP00000037180 psi-mi:rab36_mouse(display_long)|uniprotkb:Rab36(gene name)|psi-mi:Rab36(display_short) psi-mi:prex1_mouse(display_long)|uniprotkb:Prex1(gene name)|psi-mi:Prex1(display_short)|uniprotkb:Kiaa1415(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568900|imex:IM-24977-35 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_084057.1|refseq:XP_006514349.1|refseq:XP_006514350.1|refseq:XP_006514351.1|refseq:XP_006514352.1|refseq:XP_006514353.1|refseq:XP_006514354.1|refseq:XP_011241901.1|ensembl:ENSMUSG00000020175(gene)|ensembl:ENSMUST00000146440(transcript)|ensembl:ENSMUST00000147802(transcript)|ensembl:ENSMUST00000234625(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0015031"(protein transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-6811438|reactome:R-MMU-8873719|entrezgene/locuslink:76877(identity) refseq:NP_808450.2|ensembl:ENSMUSG00000039621(gene)|ensembl:ENSMUST00000036719(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0007186"(G protein-coupled receptor signaling pathway)|go:"GO:0030217"(T cell differentiation)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030426"(growth cone)|go:"GO:0030593"(neutrophil chemotaxis)|go:"GO:0030833"(regulation of actin filament polymerization)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0043198"(dendritic shaft)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045785"(positive regulation of cell adhesion)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0072593"(reactive oxygen species metabolic process)|go:"GO:1900026"(positive regulation of substrate adhesion-dependent cell spreading)|interpro:IPR000219("Dbl homology (DH) domain")|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR001331(Guanine-nucleotide dissociation stimulator, CDC24, conserved site)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001849(Pleckstrin-like)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR035899|interpro:IPR036034|interpro:IPR036388|interpro:IPR036390|reactome:R-MMU-193648|reactome:R-MMU-416482|reactome:R-MMU-9013148|reactome:R-MMU-9013149|reactome:R-MMU-9013404|reactome:R-MMU-9013406|reactome:R-MMU-9013408|reactome:R-MMU-9013409|reactome:R-MMU-9013423|reactome:R-MMU-8980692|reactome:R-MMU-9013026|reactome:R-MMU-9013106|entrezgene/locuslink:277360(identity) - - author-confidence:1.4878110167630871 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:noP+gvoMAILVG+StoX6sR8Ihx0s10090 rogid:ZIutFFrewJcYdGQ2jnIHauqR03k10090 intact-crc:E9D1B8F381E363EE|rigid:kDNJy1QA2UNtOOd1qeFwABLlz2Q false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8CAM5 uniprotkb:Q6P5E3 intact:EBI-11568902|ensembl:ENSMUSP00000119399|ensembl:ENSMUSP00000121693|ensembl:ENSMUSP00000157124 intact:EBI-8821083|ensembl:ENSMUSP00000034090 psi-mi:rab36_mouse(display_long)|uniprotkb:Rab36(gene name)|psi-mi:Rab36(display_short) psi-mi:q6p5e3_mouse(display_long)|uniprotkb:Sall1(gene name)|psi-mi:Sall1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568900|imex:IM-24977-35 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_084057.1|refseq:XP_006514349.1|refseq:XP_006514350.1|refseq:XP_006514351.1|refseq:XP_006514352.1|refseq:XP_006514353.1|refseq:XP_006514354.1|refseq:XP_011241901.1|ensembl:ENSMUSG00000020175(gene)|ensembl:ENSMUST00000146440(transcript)|ensembl:ENSMUST00000147802(transcript)|ensembl:ENSMUST00000234625(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0015031"(protein transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-6811438|reactome:R-MMU-8873719|entrezgene/locuslink:76877(identity) ensembl:ENSMUSG00000031665(gene)|ensembl:ENSMUST00000034090(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000792"(heterochromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0003337"(mesenchymal to epithelial transition involved in metanephros morphogenesis)|go:"GO:0005634"(nucleus)|go:"GO:0007507"(heart development)|go:"GO:0008013"(beta-catenin binding)|go:"GO:0008406"(gonad development)|go:"GO:0010369"(chromocenter)|go:"GO:0021983"(pituitary gland development)|go:"GO:0030177"(positive regulation of Wnt signaling pathway)|go:"GO:0030325"(adrenal gland development)|go:"GO:0042733"(embryonic digit morphogenesis)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048566"(embryonic digestive tract development)|go:"GO:0061034"(olfactory bulb mitral cell layer development)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|mint:Q6P5E3|go:"GO:0005737"(cytoplasm)|refseq:NP_067365.2|refseq:XP_006531301.1|entrezgene/locuslink:58198(identity) - - author-confidence:16.840199993216938 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:noP+gvoMAILVG+StoX6sR8Ihx0s10090 rogid:0AvtVnZqI5jfuprPHy/9HTBj5Vs10090 intact-crc:E9D1B8F381E363EE|rigid:kDNJy1QA2UNtOOd1qeFwABLlz2Q false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8CAM5 uniprotkb:Q9EQF6 intact:EBI-11568902|ensembl:ENSMUSP00000119399|ensembl:ENSMUSP00000121693|ensembl:ENSMUSP00000157124 intact:EBI-773236|ensembl:ENSMUSP00000085400|ensembl:ENSMUSP00000110377 psi-mi:rab36_mouse(display_long)|uniprotkb:Rab36(gene name)|psi-mi:Rab36(display_short) psi-mi:dpyl5_mouse(display_long)|uniprotkb:Collapsin response mediator protein 5(gene name synonym)|uniprotkb:Dpysl5(gene name)|psi-mi:Dpysl5(display_short)|uniprotkb:Crmp5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11568900|imex:IM-24977-35 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_084057.1|refseq:XP_006514349.1|refseq:XP_006514350.1|refseq:XP_006514351.1|refseq:XP_006514352.1|refseq:XP_006514353.1|refseq:XP_006514354.1|refseq:XP_011241901.1|ensembl:ENSMUSG00000020175(gene)|ensembl:ENSMUST00000146440(transcript)|ensembl:ENSMUST00000147802(transcript)|ensembl:ENSMUST00000234625(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0015031"(protein transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-6811438|reactome:R-MMU-8873719|entrezgene/locuslink:76877(identity) refseq:NP_075534.1|refseq:XP_006504108.1|ensembl:ENSMUSG00000029168(gene)|ensembl:ENSMUST00000088081(transcript)|ensembl:ENSMUST00000114729(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0007411"(axon guidance)|go:"GO:0008017"(microtubule binding)|go:"GO:0016810"("hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds")|go:"GO:0030425"(dendrite)|go:"GO:0032991"(protein-containing complex)|go:"GO:0043025"(neuronal cell body)|interpro:IPR006680(Amidohydrolase 1)|interpro:IPR011059(Metal-dependent hydrolase, composite)|interpro:IPR011778(D-hydantoinase)|interpro:IPR030626|interpro:IPR032466|mint:Q9EQF6|reactome:R-MMU-399956|entrezgene/locuslink:65254(identity) - - author-confidence:1.404986264300211 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:noP+gvoMAILVG+StoX6sR8Ihx0s10090 rogid:MmMBysVIbDgoAr5T9kOtULThKc810090 intact-crc:E9D1B8F381E363EE|rigid:kDNJy1QA2UNtOOd1qeFwABLlz2Q false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8BFY9 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-3870049|uniprotkb:Q8C0S3|uniprotkb:Q8K2E7|ensembl:ENSMUSP00000105028 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:tnpo1_mouse(display_long)|uniprotkb:Tnpo1(gene name)|psi-mi:Tnpo1(display_short)|uniprotkb:Kpnb2(gene name synonym)|uniprotkb:Importin beta-2(gene name synonym)|uniprotkb:Karyopherin beta-2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001041732.1|refseq:NP_848831.2|refseq:XP_006517699.1|refseq:XP_006517700.1|ensembl:ENSMUSG00000009470(gene)|ensembl:ENSMUST00000109401(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0061608"(nuclear import signal receptor activity)|interpro:IPR001494(Importin-beta, N-terminal)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040122|mint:Q8BFY9|reactome:R-MMU-450513|reactome:R-MMU-5620924|entrezgene/locuslink:238799(identity) - - author-confidence:3.489171199 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:khDQjW/eY+ga9LRUpgOrxbKi6lg10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8BSY0 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-8366490|uniprotkb:Q9EQ64|intact:MINT-4112262|uniprotkb:Q9EPA6|uniprotkb:Q6P8S1|ensembl:ENSMUSP00000077273 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:asph_mouse(display_long)|uniprotkb:Asph(gene name)|psi-mi:Asph(display_short)|uniprotkb:Aspartate beta-hydroxylase(gene name synonym)|uniprotkb:Peptide-aspartate beta-dioxygenase(gene name synonym)|uniprotkb:Bah(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001171327.1|refseq:NP_001171323.1|refseq:NP_001171326.1|refseq:NP_001171325.1|refseq:NP_001171321.1|refseq:NP_075553.2|refseq:NP_001171324.1|refseq:NP_001277296.1|ensembl:ENSMUSG00000028207(gene)|ensembl:ENSMUST00000078139(transcript)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005886"(plasma membrane)|go:"GO:0007389"(pattern specification process)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010524"(positive regulation of calcium ion transport into cytosol)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0031585"(regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0032237"(activation of store-operated calcium channel activity)|go:"GO:0032541"(cortical endoplasmic reticulum)|go:"GO:0033017"(sarcoplasmic reticulum membrane)|go:"GO:0033198"(response to ATP)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0042264"(peptidyl-aspartic acid hydroxylation)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051480"(regulation of cytosolic calcium ion concentration)|go:"GO:0055074"(calcium ion homeostasis)|go:"GO:0060021"(roof of mouth development)|go:"GO:0060325"(face morphogenesis)|go:"GO:0062101"(peptidyl-aspartic acid 3-dioxygenase activity)|go:"GO:0070588"(calcium ion transmembrane transport)|go:"GO:0071277"(cellular response to calcium ion)|go:"GO:0090316"(positive regulation of intracellular protein transport)|go:"GO:0097202"(activation of cysteine-type endopeptidase activity)|go:"GO:1901879"(regulation of protein depolymerization)|interpro:IPR007803(Aspartyl/Asparaginyl beta-hydroxylase)|interpro:IPR007943(Aspartyl beta-hydroxylase, N-terminal)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR027443|interpro:IPR039038|mint:Q8BSY0|reactome:R-MMU-2672351|reactome:R-MMU-5578775|go:"GO:0045862"(positive regulation of proteolysis)|entrezgene/locuslink:65973(identity) - - comment:mint|function:"Specifically hydroxylates an Asp or Asn residue in certain epidermal growth factor-like (EGF) domains of a number of proteins"|author-confidence:2.002788195 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:x06lMmMmxgaETSn5iGJ/1hScfSI10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q99MV7 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-8573659|ensembl:ENSMUSP00000093469|intact:MINT-8174120|uniprotkb:Q4FZG6|uniprotkb:Q3T4H3|uniprotkb:Q3T4H2|uniprotkb:Q9QXQ2|uniprotkb:Q8CDR4 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:rnf17_mouse(display_long)|uniprotkb:Rnf17(gene name)|psi-mi:Rnf17(display_short)|uniprotkb:Mad member-interacting protein 2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) ensembl:ENSMUSG00000000365(gene)|ensembl:ENSMUST00000095793(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0007286"(spermatid development)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR002999(Tudor)|interpro:IPR017907|interpro:IPR035437|interpro:IPR039117|refseq:XP_006519173.1|refseq:XP_006519175.1|refseq:NP_001028215.1|refseq:XP_017171542.1|entrezgene/locuslink:30054(identity) - - comment:mint|author-confidence:2.150944541 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:jysVc6935SGIMm2/CGkiZ69U1SA10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8K268 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-8318039|ensembl:ENSMUSP00000003319|intact:MINT-4117223|uniprotkb:Q9JL49 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:abcf3_mouse(display_long)|uniprotkb:Abcf3(gene name)|psi-mi:Abcf3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) mint:Q8K268|ensembl:ENSMUSG00000003234(gene)|ensembl:ENSMUST00000003319(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|go:"GO:0051607"(defense response to virus)|interpro:IPR003439(ABC transporter-like)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR017871|interpro:IPR027417|interpro:IPR032781|refseq:NP_038880.1|entrezgene/locuslink:27406(identity) - - comment:mint|author-confidence:5.066233027 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:fIdng5B0I5LmD0ZEL9fxxeVQrlY10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9Z110 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-8440240|intact:MINT-1853829|uniprotkb:Q8BGM2|uniprotkb:Q9R1P6|ensembl:ENSMUSP00000025979 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:p5cs_mouse(display_long)|uniprotkb:Aldh18a1(gene name)|psi-mi:Aldh18a1(display_short)|uniprotkb:P5cs(gene name synonym)|uniprotkb:Pycs(gene name synonym)|uniprotkb:Aldehyde dehydrogenase family 18 member A1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_705782.2|refseq:NP_062672.2|ensembl:ENSMUSG00000025007(gene)|ensembl:ENSMUST00000025979(transcript)|go:"GO:0004349"(glutamate 5-kinase activity)|go:"GO:0004350"(glutamate-5-semialdehyde dehydrogenase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0006536"(glutamate metabolic process)|go:"GO:0006561"(proline biosynthetic process)|go:"GO:0006592"(ornithine biosynthetic process)|go:"GO:0008652"(cellular amino acid biosynthetic process)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0019240"(citrulline biosynthetic process)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0055129"(L-proline biosynthetic process)|interpro:IPR000965(Gamma-glutamyl phosphate reductase GPR)|interpro:IPR001048(Aspartate/glutamate/uridylate kinase)|interpro:IPR001057(Glutamate 5-kinase)|interpro:IPR005715(Glutamate 5-kinase, ProB-related)|interpro:IPR005766(delta l-pyrroline-5-carboxylate synthetase)|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR019797|interpro:IPR020593|interpro:IPR036393|interpro:IPR041744|mint:Q9Z110|reactome:R-MMU-8964539|entrezgene/locuslink:56454(identity) - - comment:mint|author-confidence:1.427477469 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:bzLtsuFfMe3vEyBVOmcAcLYvbVs10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9DC16 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-8338430|intact:MINT-4094160|ensembl:ENSMUSP00000132922 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:ergi1_mouse(display_long)|uniprotkb:Ergic1(gene name)|psi-mi:Ergic1(display_short)|uniprotkb:Ergic32(gene name synonym)|uniprotkb:ER-Golgi intermediate compartment 32 kDa protein(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_080446.1|ensembl:ENSMUSG00000001576(gene)|ensembl:ENSMUST00000167662(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0016020"(membrane)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0030173"(integral component of Golgi membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|interpro:IPR012936(Protein of unknown function DUF1692)|interpro:IPR039542|mint:Q9DC16|entrezgene/locuslink:67458(identity) - - comment:mint|function:Possible role in transport between endoplasmic reticulum and Golgi|author-confidence:7.202540435 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:1sYA2jvGx2+olqrfBQmi5qUjNGg10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:O55222 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-6690138|uniprotkb:Q78KK2|ensembl:ENSMUSP00000033182|ensembl:ENSMUSP00000130341 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:ilk_mouse(display_long)|uniprotkb:59 kDa serine/threonine-protein kinase(gene name synonym)|uniprotkb:Beta-integrin-linked kinase(gene name synonym)|uniprotkb:ILK-1(gene name synonym)|uniprotkb:ILK-2(gene name synonym)|uniprotkb:ILK1(gene name synonym)|uniprotkb:ILK2(gene name synonym)|uniprotkb:p59ILK(gene name synonym)|uniprotkb:Ilk(gene name)|psi-mi:Ilk(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001155196.1|refseq:NP_034692.2|ensembl:ENSMUSG00000030890(gene)|ensembl:ENSMUST00000033182(transcript)|ensembl:ENSMUST00000163389(transcript)|go:"GO:0000902"(cell morphogenesis)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001658"(branching involved in ureteric bud morphogenesis)|go:"GO:0001725"(stress fiber)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0001954"(positive regulation of cell-matrix adhesion)|go:"GO:0003151"(outflow tract morphogenesis)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005178"(integrin binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005925"(focal adhesion)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007160"(cell-matrix adhesion)|go:"GO:0007229"(integrin-mediated signaling pathway)|go:"GO:0007569"(cell aging)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0009967"(positive regulation of signal transduction)|go:"GO:0010667"(negative regulation of cardiac muscle cell apoptotic process)|go:"GO:0010761"(fibroblast migration)|go:"GO:0014044"(Schwann cell development)|go:"GO:0014912"(negative regulation of smooth muscle cell migration)|go:"GO:0017124"(SH3 domain binding)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021675"(nerve development)|go:"GO:0022011"(myelination in peripheral nervous system)|go:"GO:0030017"(sarcomere)|go:"GO:0030027"(lamellipodium)|go:"GO:0030030"(cell projection organization)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030424"(axon)|go:"GO:0030513"(positive regulation of BMP signaling pathway)|go:"GO:0032288"(myelin assembly)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042327"(positive regulation of phosphorylation)|go:"GO:0043034"(costamere)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043195"(terminal bouton)|go:"GO:0043198"(dendritic shaft)|go:"GO:0043406"(positive regulation of MAP kinase activity)|go:"GO:0043410"(positive regulation of MAPK cascade)|go:"GO:0043491"(protein kinase B signaling)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045197"(establishment or maintenance of epithelial cell apical/basal polarity)|go:"GO:0045663"(positive regulation of myoblast differentiation)|go:"GO:0045669"(positive regulation of osteoblast differentiation)|go:"GO:0045773"(positive regulation of axon extension)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0048662"(negative regulation of smooth muscle cell proliferation)|go:"GO:0048812"(neuron projection morphogenesis)|go:"GO:0043025"(neuronal cell body)|go:"GO:0050772"(positive regulation of axonogenesis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:0097435"(supramolecular fiber organization)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1900026"(positive regulation of substrate adhesion-dependent cell spreading)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:2000178"(negative regulation of neural precursor cell proliferation)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001245(Tyrosine protein kinase)|interpro:IPR002110(Ankyrin)|interpro:IPR011009(Protein kinase-like)|interpro:IPR020683|interpro:IPR035692|interpro:IPR036770|mint:O55222|reactome:R-MMU-446343|reactome:R-MMU-446353|dip:DIP-41971N|entrezgene/locuslink:16202(identity) - - author-confidence:10.33702891 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:9kMagkwUrtq1XaI+9PXPJ21hHY810090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8BTM9 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11568961|uniprotkb:Q920A2|uniprotkb:Q811P7|uniprotkb:Q91ZC8|uniprotkb:Q3TRL5|uniprotkb:Q3U3I4|uniprotkb:Q3TNQ1|uniprotkb:Q8BKV7|ensembl:ENSMUSP00000032811 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:grp4_mouse(display_long)|uniprotkb:Rasgrp4(gene name)|psi-mi:Rasgrp4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001167626.1|refseq:NP_660131.2|ensembl:ENSMUSG00000030589(gene)|ensembl:ENSMUST00000032811(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009991"(response to extracellular stimulus)|go:"GO:0016020"(membrane)|go:"GO:0030154"(cell differentiation)|go:"GO:0046579"(positive regulation of Ras protein signal transduction)|go:"GO:0046872"(metal ion binding)|interpro:IPR000651(Guanine nucleotide exchange factor for Ras-like GTPases, N-terminal)|interpro:IPR001895(Guanine-nucleotide dissociation stimulator CDC25)|interpro:IPR002219(Protein kinase C, phorbol ester/diacylglycerol binding)|interpro:IPR008937(Ras guanine nucleotide exchange factor)|interpro:IPR020454|interpro:IPR023578|interpro:IPR036964|go:"GO:0007264"(small GTPase mediated signal transduction)|reactome:R-MMU-5673001|entrezgene/locuslink:233046(identity) - - author-confidence:2.914395977 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:0cy4fFrfKwXB0bKXI7SxJgfrTrc10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q6ZPR5 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11568983|uniprotkb:Q8R0J3|uniprotkb:Q3TPP1|uniprotkb:Q8CD83|uniprotkb:Q9CX74|uniprotkb:Q3TPE0|uniprotkb:Q8CD12|uniprotkb:Q8CBJ5|ensembl:ENSMUSP00000006053 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:nsma3_mouse(display_long)|uniprotkb:Kiaa1418(gene name synonym)|uniprotkb:Neutral sphingomyelinase 3(gene name synonym)|uniprotkb:Neutral sphingomyelinase III(gene name synonym)|uniprotkb:Smpd4(gene name)|psi-mi:Smpd4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001158081.1|refseq:NP_001158082.1|refseq:NP_001158083.1|refseq:NP_084221.2|refseq:XP_006522785.1|ensembl:ENSMUSG00000005899(gene)|ensembl:ENSMUST00000006053(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0004767"(sphingomyelin phosphodiesterase activity)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005640"(nuclear outer membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006685"(sphingomyelin catabolic process)|go:"GO:0007029"(endoplasmic reticulum organization)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042383"(sarcolemma)|go:"GO:0046475"(glycerophospholipid catabolic process)|go:"GO:0046513"(ceramide biosynthetic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0050290"(sphingomyelin phosphodiesterase D activity)|interpro:IPR024129|go:"GO:0071356"(cellular response to tumor necrosis factor)|reactome:R-MMU-1660662|entrezgene/locuslink:77626(identity) - - author-confidence:10.77971293 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:Ar6EgV2x1pyN/3pkiUiOEUZhUjQ10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:E9Q8N1 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11568994|ensembl:ENSMUSP00000107477 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:e9q8n1_mouse(display_long)|uniprotkb:Ttn(gene name)|psi-mi:Ttn(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_035782.3|ensembl:ENSMUSG00000051747(gene)|ensembl:ENSMUST00000111846(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|interpro:IPR000719(Protein kinase, core)|interpro:IPR003598(Immunoglobulin subtype 2)|interpro:IPR003599(Immunoglobulin subtype)|interpro:IPR003961(Fibronectin, type III)|interpro:IPR004168(PPAK motif)|interpro:IPR007110(Immunoglobulin-like)|interpro:IPR008266(Tyrosine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR013098(Immunoglobulin I-set)|interpro:IPR013106(Immunoglobulin V-set)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR015129(Titin Z)|interpro:IPR036116|interpro:IPR036179|interpro:IPR040849|entrezgene/locuslink:22138(identity) - - author-confidence:1.561175183 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:/5mTaVZ4ZpLMty4vlje7jgzRtxU10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:E9QLQ7 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11568979|ensembl:ENSMUSP00000027693|ensembl:ENSMUSP00000108005 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:e9qlq7_mouse(display_long)|uniprotkb:Rab7l1(gene name synonym)|uniprotkb:Rab29(gene name)|psi-mi:Rab29(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_659124.2|ensembl:ENSMUSG00000026433(gene)|ensembl:ENSMUST00000027693(transcript)|ensembl:ENSMUST00000112386(transcript)|go:"GO:0001921"(positive regulation of receptor recycling)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005769"(early endosome)|go:"GO:0005773"(vacuole)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007030"(Golgi organization)|go:"GO:0007416"(synapse assembly)|go:"GO:0009617"(response to bacterium)|go:"GO:0010977"(negative regulation of neuron projection development)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019894"(kinesin binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042110"(T cell activation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0050862"(positive regulation of T cell receptor signaling pathway)|go:"GO:0055037"(recycling endosome)|go:"GO:0070840"(dynein complex binding)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090316"(positive regulation of intracellular protein transport)|go:"GO:1901998"(toxin transport)|go:"GO:1905279"(regulation of retrograde transport, endosome to Golgi)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|entrezgene/locuslink:226422(identity) - - author-confidence:5.626549617 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:5+/XPVrzqtcnmQbbuqN2Spz1rW810090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9DB54 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11567974|uniprotkb:Q6PFA4|uniprotkb:Q3UD74|ensembl:ENSMUSP00000031419 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:f216a_mouse(display_long)|uniprotkb:Fam216a(gene name)|psi-mi:Fam216a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_081159.1|ensembl:ENSMUSG00000029463(gene)|ensembl:ENSMUST00000031419(transcript)|interpro:IPR029373|entrezgene/locuslink:68948(identity) - - author-confidence:1.165258586 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:esvXrLMS1/ukGuV5x3AuEOI+u0s10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q640N3 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-4326075|uniprotkb:E9QKX0|uniprotkb:Q571I5 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:rhg30_mouse(display_long)|uniprotkb:Arhgap30(gene name)|psi-mi:Arhgap30(display_short)|uniprotkb:Rho-type GTPase-activating protein 30(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001005508.2|interpro:IPR008936(Rho GTPase activation protein)|interpro:IPR000198(RhoGAP)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0043231"(intracellular membrane-bounded organelle)|reactome:R-MMU-8980692|reactome:R-MMU-9013148|reactome:R-MMU-9013149|reactome:R-MMU-9013420|entrezgene/locuslink:226652(identity) - - author-confidence:7.716268102 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:6ThouE4dmXi8MQuZ6odULeofha010090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9WTN6 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11569043|uniprotkb:Q5SWV0|ensembl:ENSMUSP00000075814 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:s22al_mouse(display_long)|uniprotkb:Octn3(gene name synonym)|uniprotkb:Organic cation/carnitine transporter 3(gene name synonym)|uniprotkb:Slc22a9(gene name synonym)|uniprotkb:Solute carrier family 22 member 9(gene name synonym)|uniprotkb:Slc22a21(gene name)|psi-mi:Slc22a21(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_062697.1|interpro:IPR036259|ensembl:ENSMUSG00000063652(gene)|ensembl:ENSMUST00000076493(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005777"(peroxisome)|go:"GO:0015226"(carnitine transmembrane transporter activity)|go:"GO:0015879"(carnitine transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031231"(intrinsic component of peroxisomal membrane)|interpro:IPR004749(Organic cation transport protein)|interpro:IPR005828(General substrate transporter)|interpro:IPR005829(Sugar transporter, conserved site)|interpro:IPR020846|entrezgene/locuslink:56517(identity) - - author-confidence:30.85579032 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:ESnal6cNXV8/DKc4LZDLRpKs2UQ10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9CZE3 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) - - author-confidence:27.43748427 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9WUU8 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-6126152|uniprotkb:Q922A9|uniprotkb:Q922F7|uniprotkb:Q9EPP8|uniprotkb:Q9R0X3 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:tnip1_mouse(display_long)|uniprotkb:Tnip1(gene name)|psi-mi:Tnip1(display_short)|uniprotkb:Abin(gene name synonym)|uniprotkb:Naf1(gene name synonym)|uniprotkb:Nef-associated factor 1(gene name synonym)|uniprotkb:Virion-associated nuclear shuttling protein(gene name synonym)|uniprotkb:A20-binding inhibitor of NF-kappa-B activation 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:XP_011247465.1|refseq:XP_006533910.1|refseq:NP_001186205.1|refseq:NP_001258384.1|reactome:R-MMU-5689896|dip:DIP-59199N|go:"GO:0002755"(MyD88-dependent toll-like receptor signaling pathway)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006954"(inflammatory response)|go:"GO:0007159"(leukocyte cell-cell adhesion)|go:"GO:0009101"(glycoprotein biosynthetic process)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043124"(negative regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050729"(positive regulation of inflammatory response)|go:"GO:0051019"(mitogen-activated protein kinase binding)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0085032"(modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade)|go:"GO:1903003"(positive regulation of protein deubiquitination)|interpro:IPR033372|rcsb pdb:6N5M|rcsb pdb:6N6R|rcsb pdb:6N6S|entrezgene/locuslink:57783(identity) - - author-confidence:6.256303339 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:3vIAOz/0YAeFIFZUB4k0VUYlvd810090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8BG05 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-2735601|uniprotkb:Q8BHF8|ensembl:ENSMUSP00000088298|ensembl:ENSMUSP00000107595 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:roa3_mouse(display_long)|uniprotkb:Hnrnpa3(gene name)|psi-mi:Hnrnpa3(display_short)|uniprotkb:Hnrpa3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_444493.1|refseq:NP_666242.2|refseq:NP_932758.1|ensembl:ENSMUSG00000059005(gene)|ensembl:ENSMUST00000090792(transcript)|ensembl:ENSMUST00000111964(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|go:"GO:0014069"(postsynaptic density)|go:"GO:0035770"(ribonucleoprotein granule)|go:"GO:0043005"(neuron projection)|go:"GO:0051028"(mRNA transport)|go:"GO:0051033"(RNA transmembrane transporter activity)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1990124"(messenger ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034513|interpro:IPR034516|interpro:IPR035979|mint:Q8BG05|reactome:R-MMU-72163|reactome:R-MMU-72203|refseq:XP_011237818.1|entrezgene/locuslink:229279(identity) - - author-confidence:342.4018107 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:KcZjXvHON9QZSqHWi4nWSDz/HtE10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8BW10 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-4285326|uniprotkb:Q7TPR3|uniprotkb:Q9CRD7|ensembl:ENSMUSP00000003946 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:nob1_mouse(display_long)|uniprotkb:Nob1(gene name)|psi-mi:Nob1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_080553.1|ensembl:ENSMUSG00000003848(gene)|ensembl:ENSMUST00000003946(transcript)|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0007601"(visual perception)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0046872"(metal ion binding)|interpro:IPR002716(PilT protein, N-terminal)|interpro:IPR014881("Nin one binding (NOB1) Zn-ribbon like")|interpro:IPR017117(D-site 20S pre-rRNA nuclease)|interpro:IPR033411|interpro:IPR033461|interpro:IPR036283|interpro:IPR039907|mint:Q8BW10|rcsb pdb:2CON|reactome:R-MMU-6791226|go:"GO:0005737"(cytoplasm)|entrezgene/locuslink:67619(identity) - - author-confidence:281.6220085 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:4FSF629OjIWA4JJM1shkYB+O8aQ10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q7TSI3 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-4286465|uniprotkb:Q80TJ4|ensembl:ENSMUSP00000066736 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:pp6r1_mouse(display_long)|uniprotkb:Ppp6r1(gene name)|psi-mi:Ppp6r1(display_short)|uniprotkb:Kiaa1115(gene name synonym)|uniprotkb:Pp6r1(gene name synonym)|uniprotkb:Saps1(gene name synonym)|uniprotkb:SAPS domain family member 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_766482.2|refseq:XP_011248858.1|ensembl:ENSMUSG00000052296(gene)|ensembl:ENSMUST00000064099(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0019888"(protein phosphatase regulator activity)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0043666"(regulation of phosphoprotein phosphatase activity)|interpro:IPR007587(SIT4 phosphatase-associated protein)|interpro:IPR016024(Armadillo-type fold)|reactome:R-MMU-204005|entrezgene/locuslink:243819(identity) - - author-confidence:3.677668912 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:ET7IE429eaRNAHpRwjds5XF7nrA10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:A2AWL7 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-1216544|uniprotkb:Q3TS36|uniprotkb:Q6A056|uniprotkb:Q8BQX1|uniprotkb:Q8CCL4|uniprotkb:Q9QXJ5|uniprotkb:A2AWL6|ensembl:ENSMUSP00000043795 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:mgap_mouse(display_long)|uniprotkb:Mga(gene name)|psi-mi:Mga(display_short)|uniprotkb:Kiaa4252(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_038748.2|ensembl:ENSMUSG00000033943(gene)|ensembl:ENSMUST00000046717(transcript)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001708"(cell fate specification)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0071339"(MLL1 complex)|go:"GO:1990830"(cellular response to leukemia inhibitory factor)|interpro:IPR001699(Transcription factor, T-box)|interpro:IPR008967(p53-like transcription factor, DNA-binding)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR018186|interpro:IPR032060|interpro:IPR036638|interpro:IPR036960|interpro:IPR037935|reactome:R-MMU-8953750|entrezgene/locuslink:29808(identity) - - author-confidence:270.5781132 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:KTyR7itpvWUYW8ZG1tVxQHy7ysM10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q00899 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-6921536|ensembl:ENSMUSP00000021692 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:tyy1_mouse(display_long)|uniprotkb:Yy1(gene name)|psi-mi:Yy1(display_short)|uniprotkb:Ucrbp(gene name synonym)|uniprotkb:Delta transcription factor(gene name synonym)|uniprotkb:NF-E1(gene name synonym)|uniprotkb:UCR-motif DNA-binding protein(gene name synonym)|uniprotkb:Yin and yang 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) ensembl:ENSMUST00000021692(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|ensembl:ENSMUSG00000021264(gene)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005677"(chromatin silencing complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006403"(RNA localization)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007283"(spermatogenesis)|go:"GO:0009952"(anterior/posterior pattern specification)|go:"GO:0010225"(response to UV-C)|go:"GO:0010467"(gene expression)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0016363"(nuclear matrix)|go:"GO:0030183"(B cell differentiation)|go:"GO:0031011"(Ino80 complex)|go:"GO:0031519"(PcG protein complex)|go:"GO:0032688"(negative regulation of interferon-beta production)|go:"GO:0034644"(cellular response to UV)|go:"GO:0034696"(response to prostaglandin F)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046332"(SMAD binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0048468"(cell development)|go:"GO:0048593"(camera-type eye morphogenesis)|go:"GO:0051276"(chromosome organization)|go:"GO:0061052"(negative regulation of cell growth involved in cardiac muscle cell development)|go:"GO:0071347"(cellular response to interleukin-1)|go:"GO:0071707"(immunoglobulin heavy chain V-D-J recombination)|go:"GO:1902894"(negative regulation of miRNA transcription)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR017114(Transcription factor yin and yang)|interpro:IPR036236|mint:Q00899|reactome:R-MMU-5689603|reactome:R-MMU-5696394|reactome:R-MMU-9018519|refseq:NP_033563.2|dip:DIP-59285N|entrezgene/locuslink:22632(identity) - - author-confidence:7.480288958 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:TVKas6Dv9iMdl/6BfK+3FUIZnzs10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:P60334 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11569052|uniprotkb:Q3UED8|ensembl:ENSMUSP00000046517 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:cdo1_mouse(display_long)|uniprotkb:Cysteine dioxygenase type I(gene name synonym)|uniprotkb:Cdo1(gene name)|psi-mi:Cdo1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_149026.1|ensembl:ENSMUSG00000033022(gene)|ensembl:ENSMUST00000035804(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0007595"(lactation)|go:"GO:0008198"(ferrous iron binding)|go:"GO:0010243"(response to organonitrogen compound)|go:"GO:0016702"(oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen)|go:"GO:0017172"(cysteine dioxygenase activity)|go:"GO:0019448"(L-cysteine catabolic process)|go:"GO:0019452"(L-cysteine catabolic process to taurine)|go:"GO:0019530"(taurine metabolic process)|go:"GO:0033762"(response to glucagon)|go:"GO:0042412"(taurine biosynthetic process)|go:"GO:0043200"(response to amino acid)|go:"GO:0045471"(response to ethanol)|go:"GO:0051384"(response to glucocorticoid)|go:"GO:0051591"(response to cAMP)|interpro:IPR010300(Cysteine dioxygenase type I)|interpro:IPR011051(Cupin, RmlC-type)|interpro:IPR014710(RmlC-like jelly roll fold)|rcsb pdb:2ATF|rcsb pdb:2Q4S|reactome:R-MMU-1614558|entrezgene/locuslink:12583(identity) - - author-confidence:1.054409079 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:E6apUW+N99JgrNCfCDnGP020sGw10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:P28649 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11569057|ensembl:ENSMUSP00000034811 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:cp19a_mouse(display_long)|uniprotkb:Arom(gene name synonym)|uniprotkb:CYPXIX(gene name synonym)|uniprotkb:Cyp19(gene name synonym)|uniprotkb:Cytochrome P-450AROM(gene name synonym)|uniprotkb:Cytochrome P450 19A1(gene name synonym)|uniprotkb:Estrogen synthase(gene name synonym)|uniprotkb:Cyp19a1(gene name)|psi-mi:Cyp19a1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001335100.1|refseq:NP_001335101.1|refseq:NP_001335102.1|refseq:NP_031836.1|ensembl:ENSMUSG00000032274(gene)|ensembl:ENSMUST00000034811(transcript)|go:"GO:0002677"(negative regulation of chronic inflammatory response)|go:"GO:0005506"(iron ion binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006703"(estrogen biosynthetic process)|go:"GO:0006710"(androgen catabolic process)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008207"(C21-steroid hormone metabolic process)|go:"GO:0008209"(androgen metabolic process)|go:"GO:0008585"(female gonad development)|go:"GO:0010760"(negative regulation of macrophage chemotaxis)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016712"(oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen)|go:"GO:0020037"(heme binding)|go:"GO:0030540"(female genitalia development)|go:"GO:0030879"(mammary gland development)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0043197"(dendritic spine)|go:"GO:0043679"(axon terminus)|go:"GO:0045202"(synapse)|go:"GO:0032355"(response to estradiol)|go:"GO:0045779"(negative regulation of bone resorption)|go:"GO:0050803"(regulation of synapse structure or activity)|go:"GO:0060065"(uterus development)|go:"GO:0060736"(prostate gland growth)|go:"GO:0061370"(testosterone biosynthetic process)|go:"GO:0070330"(aromatase activity)|go:"GO:0097720"(calcineurin-mediated signaling)|go:"GO:2000866"(positive regulation of estradiol secretion)|interpro:IPR001128(Cytochrome P450)|interpro:IPR002401(Cytochrome P450, E-class, group I)|interpro:IPR017972|interpro:IPR036396|reactome:R-MMU-193144|reactome:R-MMU-211976|entrezgene/locuslink:13075(identity) - - author-confidence:19.45614126 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:qnInOrzL6gz3QeghQ1Ak+pj5FWY10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q5SSL4 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-2310685|uniprotkb:Q3U5G0|uniprotkb:Q3UQJ6|uniprotkb:Q3UY38|uniprotkb:Q5SYJ5|uniprotkb:Q5SYJ7|uniprotkb:Q5SYJ8|uniprotkb:Q5SYJ9|uniprotkb:Q6PCY1|uniprotkb:Q6PDH3|ensembl:ENSMUSP00000072522 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:abr_mouse(display_long)|uniprotkb:Abr(gene name)|psi-mi:Abr(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001333599.1|refseq:NP_001278115.1|refseq:NP_942597.1|refseq:NP_932135.1|refseq:NP_942598.1|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0007420"(brain development)|go:"GO:0016020"(membrane)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030336"(negative regulation of cell migration)|go:"GO:0030424"(axon)|go:"GO:0032496"(response to lipopolysaccharide)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0042472"(inner ear morphogenesis)|go:"GO:0043114"(regulation of vascular permeability)|go:"GO:0043197"(dendritic spine)|go:"GO:0043314"(negative regulation of neutrophil degranulation)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050766"(positive regulation of phagocytosis)|go:"GO:0050804"(modulation of chemical synaptic transmission)|go:"GO:0050885"(neuromuscular process controlling balance)|go:"GO:0060313"(negative regulation of blood vessel remodeling)|go:"GO:0090630"(activation of GTPase activity)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099092"(postsynaptic density, intracellular component)|interpro:IPR000008(C2 calcium-dependent membrane targeting)|interpro:IPR000198(RhoGAP)|interpro:IPR000219("Dbl homology (DH) domain")|interpro:IPR001331(Guanine-nucleotide dissociation stimulator, CDC24, conserved site)|interpro:IPR001849(Pleckstrin-like)|interpro:IPR008936(Rho GTPase activation protein)|interpro:IPR035892|interpro:IPR035899|interpro:IPR037769|interpro:IPR037865|reactome:R-MMU-193648|reactome:R-MMU-416482|reactome:R-MMU-8980692|reactome:R-MMU-9013026|reactome:R-MMU-9013106|reactome:R-MMU-9013148|reactome:R-MMU-9013149|reactome:R-MMU-9013404|reactome:R-MMU-9013423|ensembl:ENSMUSG00000017631(gene)|ensembl:ENSMUST00000072740(transcript)|go:"GO:0002692"(negative regulation of cellular extravasation)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|entrezgene/locuslink:109934(identity) - - author-confidence:1.499413622 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:rkYDNM1hPvcrtB4OrgtHGMK0NTs10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q5SV02 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11517874|ensembl:ENSMUSP00000020649 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:q5sv02_mouse(display_long)|uniprotkb:Rad50(gene name)|psi-mi:Rad50(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_033038.2|ensembl:ENSMUSG00000020380(gene)|ensembl:ENSMUST00000020649(transcript)|go:"GO:0000723"(telomere maintenance)|go:"GO:0005524"(ATP binding)|go:"GO:0006281"(DNA repair)|go:"GO:0030870"(Mre11 complex)|go:"GO:0046872"(metal ion binding)|interpro:IPR004584(Recombination/repair protein Rad50)|interpro:IPR013134(Zinc hook, Rad50)|interpro:IPR027417|interpro:IPR038729|entrezgene/locuslink:19360(identity) - - author-confidence:414.6771173 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:pBguymJ52bb0jOn+5+eZgwTHjC010090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8CFZ4 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11566294|ensembl:ENSMUSP00000064131 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:gpc3_mouse(display_long)|uniprotkb:Gpc3(gene name)|psi-mi:Gpc3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_057906.2|ensembl:ENSMUSG00000055653(gene)|ensembl:ENSMUST00000069360(transcript)|go:"GO:0001658"(branching involved in ureteric bud morphogenesis)|go:"GO:0001822"(kidney development)|go:"GO:0005764"(lysosome)|go:"GO:0005796"(Golgi lumen)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009617"(response to bacterium)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0009948"(anterior/posterior axis specification)|go:"GO:0009986"(cell surface)|go:"GO:0010171"(body morphogenesis)|go:"GO:0010466"(negative regulation of peptidase activity)|go:"GO:0016477"(cell migration)|go:"GO:0030282"(bone mineralization)|go:"GO:0030316"(osteoclast differentiation)|go:"GO:0030324"(lung development)|go:"GO:0030513"(positive regulation of BMP signaling pathway)|go:"GO:0035116"(embryonic hindlimb morphogenesis)|go:"GO:0040008"(regulation of growth)|go:"GO:0042074"(cell migration involved in gastrulation)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0045807"(positive regulation of endocytosis)|go:"GO:0045879"(negative regulation of smoothened signaling pathway)|go:"GO:0045880"(positive regulation of smoothened signaling pathway)|go:"GO:0045926"(negative regulation of growth)|go:"GO:0046326"(positive regulation of glucose import)|go:"GO:0046658"(anchored component of plasma membrane)|go:"GO:0050680"(negative regulation of epithelial cell proliferation)|go:"GO:0060422"(peptidyl-dipeptidase inhibitor activity)|go:"GO:0060828"(regulation of canonical Wnt signaling pathway)|go:"GO:0060976"(coronary vasculature development)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0072111"(cell proliferation involved in kidney development)|go:"GO:0072138"(mesenchymal cell proliferation involved in ureteric bud development)|go:"GO:0072180"(mesonephric duct morphogenesis)|go:"GO:0072203"(cell proliferation involved in metanephros development)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:1905475"(regulation of protein localization to membrane)|go:"GO:2000050"(regulation of non-canonical Wnt signaling pathway)|go:"GO:2000096"(positive regulation of Wnt signaling pathway, planar cell polarity pathway)|interpro:IPR001863(Glypican)|interpro:IPR015501(Glypican 3)|interpro:IPR019803|reactome:R-MMU-1971475|reactome:R-MMU-2022928|reactome:R-MMU-2024096|reactome:R-MMU-381426|reactome:R-MMU-8957275|reactome:R-MMU-975634|entrezgene/locuslink:14734(identity) - - author-confidence:1.86355693 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:HmsJuKaE1Tz2SqFkBWtuN9PONDA10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9Z1W8 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11568972|uniprotkb:Q8VHY2|uniprotkb:Q32MR8|ensembl:ENSMUSP00000007340 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:at12a_mouse(display_long)|uniprotkb:Atp1al1(gene name synonym)|uniprotkb:"Non-gastric H(+)/K(+) ATPase subunit alpha"(gene name synonym)|uniprotkb:Proton pump(gene name synonym)|uniprotkb:Atp12a(gene name)|psi-mi:Atp12a(display_short)|uniprotkb:HK alpha 2(gene name synonym)|uniprotkb:"Non-gastric Na(+)/K(+) ATPase subunit alpha"(gene name synonym)|uniprotkb:Sodium pump(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_619593.2|ensembl:ENSMUSG00000022229(gene)|ensembl:ENSMUST00000007340(transcript)|go:"GO:0005391"("P-type sodium:potassium-exchanging transporter activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006883"(cellular sodium ion homeostasis)|go:"GO:0006885"(regulation of pH)|go:"GO:0008900"("P-type potassium:proton transporter activity")|go:"GO:0010038"(response to metal ion)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0030007"(cellular potassium ion homeostasis)|go:"GO:0036376"(sodium ion export across plasma membrane)|go:"GO:0046872"(metal ion binding)|go:"GO:0055075"(potassium ion homeostasis)|go:"GO:1902600"(proton transmembrane transport)|go:"GO:1990573"(potassium ion import across plasma membrane)|interpro:IPR001757(ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter)|interpro:IPR004014(ATPase, P-type cation-transporter, N-terminal)|interpro:IPR005775(ATPase, P-type cation exchange, alpha subunit, eukaryotic)|interpro:IPR006068(ATPase, P-type cation-transporter, C-terminal)|interpro:IPR008250(E1-E2 ATPase-associated region)|interpro:IPR018303|interpro:IPR023214|interpro:IPR023298|interpro:IPR023299|interpro:IPR030318|interpro:IPR036412|interpro:IPR044492|reactome:R-MMU-936837|entrezgene/locuslink:192113(identity) - - author-confidence:2.218596656 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:UhIAcoKBKEPYftd/IFfswIMseVE10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q60875 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-772191|uniprotkb:E9QNW9|uniprotkb:O09115|uniprotkb:Q3TBI4|uniprotkb:Q3TJ16|uniprotkb:Q8CHE1|uniprotkb:Q923E0|uniprotkb:Q9ESG7|ensembl:ENSMUSP00000029694 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:arhg2_mouse(display_long)|uniprotkb:Kiaa0651(gene name synonym)|uniprotkb:Lbcl1(gene name synonym)|uniprotkb:Lfc(gene name synonym)|uniprotkb:Guanine nucleotide exchange factor H1(gene name synonym)|uniprotkb:Lymphoid blast crisis-like 1(gene name synonym)|uniprotkb:LBC'S first cousin(gene name synonym)|uniprotkb:Oncogene LFC(gene name synonym)|uniprotkb:Rhobin(gene name synonym)|uniprotkb:Arhgef2(gene name)|psi-mi:Arhgef2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001185840.1|refseq:NP_001185841.1|refseq:NP_001185842.1|refseq:NP_032513.3|refseq:XP_006501130.1|ensembl:ENSMUSG00000028059(gene)|ensembl:ENSMUST00000029694(transcript)|go:"GO:0000132"(establishment of mitotic spindle orientation)|go:"GO:0000902"(cell morphogenesis)|go:"GO:0002102"(podosome)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005819"(spindle)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005874"(microtubule)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0007015"(actin filament organization)|go:"GO:0007026"(negative regulation of microtubule depolymerization)|go:"GO:0008017"(microtubule binding)|go:"GO:0014069"(postsynaptic density)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031982"(vesicle)|go:"GO:0032587"(ruffle membrane)|go:"GO:0032755"(positive regulation of interleukin-6 production)|go:"GO:0032760"(positive regulation of tumor necrosis factor production)|go:"GO:0032991"(protein-containing complex)|go:"GO:0035023"(regulation of Rho protein signal transduction)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043198"(dendritic shaft)|go:"GO:0045087"(innate immune response)|go:"GO:0045666"(positive regulation of neuron differentiation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0050731"(positive regulation of peptidyl-tyrosine phosphorylation)|go:"GO:0050768"(negative regulation of neurogenesis)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0055059"(asymmetric neuroblast division)|go:"GO:0071225"(cellular response to muramyl dipeptide)|go:"GO:0071802"(negative regulation of podosome assembly)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099092"(postsynaptic density, intracellular component)|go:"GO:2001224"(positive regulation of neuron migration)|interpro:IPR000219("Dbl homology (DH) domain")|interpro:IPR001849(Pleckstrin-like)|interpro:IPR002219(Protein kinase C, phorbol ester/diacylglycerol binding)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR035899|interpro:IPR037806|interpro:IPR041020|mint:Q60875|rcsb pdb:5WI4|reactome:R-MMU-193648|reactome:R-MMU-416482|reactome:R-MMU-8980692|reactome:R-MMU-9013026|entrezgene/locuslink:16800(identity) - - author-confidence:6.185616696 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:Le4PMm1AT/ManVpetNT2wBsUlok10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:F8WGW3 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11569048|ensembl:ENSMUSP00000092810 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:f8wgw3_mouse(display_long)|uniprotkb:Srbd1(gene name)|psi-mi:Srbd1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_084409.3|ensembl:ENSMUSG00000024135(gene)|ensembl:ENSMUST00000095187(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006139"(nucleobase-containing compound metabolic process)|interpro:IPR003029(S1, RNA binding)|interpro:IPR006641(Resolvase, RNase H-like fold)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR018974|interpro:IPR022967|interpro:IPR023319|interpro:IPR023323|interpro:IPR032639|interpro:IPR037027|interpro:IPR041692|interpro:IPR044146|entrezgene/locuslink:78586(identity) - - author-confidence:4.594631742 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:u7o4S3hy4AeslIj/Nqt5s+yCRPY10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:P68369 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-400542|uniprotkb:P02551|uniprotkb:P05210|uniprotkb:P05212|uniprotkb:Q3TGF0|uniprotkb:Q3TIW2|uniprotkb:Q3TPJ1|uniprotkb:Q3ULN1|uniprotkb:Q5XJF8|ensembl:ENSMUSP00000094778 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:tba1a_mouse(display_long)|uniprotkb:Tuba1a(gene name)|psi-mi:Tuba1a(display_short)|uniprotkb:Tubulin alpha-1 chain(gene name synonym)|uniprotkb:Alpha-tubulin 1(gene name synonym)|uniprotkb:Alpha-tubulin isotype M-alpha-1(gene name synonym)|uniprotkb:Tuba1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_035783.1|reactome:R-MMU-2467813|reactome:R-MMU-2500257|reactome:R-MMU-2565942|reactome:R-MMU-3371497|reactome:R-MMU-380259|reactome:R-MMU-380270|reactome:R-MMU-380284|reactome:R-MMU-380320|reactome:R-MMU-437239|reactome:R-MMU-5610787|reactome:R-MMU-5617833|reactome:R-MMU-5620912|reactome:R-MMU-5620924|reactome:R-MMU-5626467|reactome:R-MMU-5663220|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-6811436|reactome:R-MMU-68877|reactome:R-MMU-8852276|reactome:R-MMU-8854518|reactome:R-MMU-8955332|reactome:R-MMU-9646399|reactome:R-MMU-9648025|reactome:R-MMU-9668328|reactome:R-MMU-983189|ensembl:ENSMUSG00000072235(gene)|ensembl:ENSMUST00000097014(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005874"(microtubule)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0042802"(identical protein binding)|go:"GO:0043209"(myelin sheath)|go:"GO:0045121"(membrane raft)|go:"GO:0050807"(regulation of synapse organization)|go:"GO:0055037"(recycling endosome)|interpro:IPR000217(Tubulin)|interpro:IPR002452(Alpha tubulin)|interpro:IPR003008(Tubulin/FtsZ, GTPase)|interpro:IPR008280(Tubulin/FtsZ, C-terminal)|interpro:IPR017975|interpro:IPR018316|interpro:IPR023123|interpro:IPR036525|interpro:IPR037103|mint:P68369|rcsb pdb:6JZD|reactome:R-MMU-190840|reactome:R-MMU-2132295|entrezgene/locuslink:22142(identity) - - author-confidence:2.401917821 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:1CzEzrf5y8hrQRPKgWQS1Wm1aCY10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q6ZQ08 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-682479|intact:EBI-2104684|uniprotkb:B2RY28|uniprotkb:Q3UPB7|uniprotkb:Q8BSB4|uniprotkb:Q8BXB2|uniprotkb:Q8C0H2|uniprotkb:Q8K3D8 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:cnot1_mouse(display_long)|uniprotkb:Cnot1(gene name)|psi-mi:Cnot1(display_short)|uniprotkb:Kiaa1007(gene name synonym)|uniprotkb:CCR4-associated factor 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_835179.1|refseq:XP_006530937.1|dip:DIP-46845N|mint:Q6ZQ08|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000288"(nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:0000932"(P-body)|go:"GO:0001829"(trophectodermal cell differentiation)|go:"GO:0004535"("poly(A)-specific ribonuclease activity")|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0010606"(positive regulation of cytoplasmic mRNA processing body assembly)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0030331"(estrogen receptor binding)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0035195"(gene silencing by miRNA)|go:"GO:0042974"(retinoic acid receptor binding)|go:"GO:0048387"(negative regulation of retinoic acid receptor signaling pathway)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0060213"("positive regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0061014"(positive regulation of mRNA catabolic process)|go:"GO:0070016"(armadillo repeat domain binding)|go:"GO:1900153"(positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:2000036"(regulation of stem cell population maintenance)|interpro:IPR007196(CCR4-Not complex component, Not1)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR024557|interpro:IPR032191|interpro:IPR032193|interpro:IPR032194|interpro:IPR038535|interpro:IPR040398|reactome:R-MMU-429947|reactome:R-MMU-6804115|entrezgene/locuslink:234594(identity) - - comment:AfCS Y2H protein 39306. Translated from nucleotide sequence.|author-confidence:1.286282686 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:2Q4quoSuPlUbD4QkiAkc9Hr9avI10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:B2RXR6 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11566298|uniprotkb:B2RXN6|uniprotkb:B7ZWK8|ensembl:ENSMUSP00000137616 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:anr44_mouse(display_long)|uniprotkb:Ankyrin repeat domain-containing protein 44(gene name synonym)|uniprotkb:Ankrd44(gene name)|psi-mi:Ankrd44(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001074902.2|ensembl:ENSMUSG00000052331(gene)|ensembl:ENSMUST00000179030(transcript)|interpro:IPR002110(Ankyrin)|interpro:IPR020683|interpro:IPR036770|entrezgene/locuslink:329154(identity) - - author-confidence:3.673563374 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:u2gh8Mr3OLcC72DfwHC0bMCFj3c10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q7TMK6 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-643708|uniprotkb:Q8BY47|uniprotkb:Q8R347|uniprotkb:Q8VCN4|uniprotkb:Q99LU2|uniprotkb:Q66JV2|ensembl:ENSMUSP00000067752 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:hook2_mouse(display_long)|uniprotkb:Hook2(gene name)|psi-mi:Hook2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001161463.1|refseq:NP_573518.2|ensembl:ENSMUSG00000052566(gene)|ensembl:ENSMUST00000064495(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005874"(microtubule)|go:"GO:0007032"(endosome organization)|go:"GO:0007040"(lysosome organization)|go:"GO:0008017"(microtubule binding)|go:"GO:0008333"(endosome to lysosome transport)|go:"GO:0015031"(protein transport)|go:"GO:0030705"(cytoskeleton-dependent intracellular transport)|go:"GO:0030897"(HOPS complex)|go:"GO:0031122"(cytoplasmic microtubule organization)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0051959"(dynein light intermediate chain binding)|go:"GO:0070695"(FHF complex)|go:"GO:1905719"(protein localization to perinuclear region of cytoplasm)|interpro:IPR001715(Calponin-like actin-binding)|interpro:IPR008636(HOOK)|interpro:IPR036872|interpro:IPR043936|go:"GO:0045022"(early endosome to late endosome transport)|entrezgene/locuslink:170833(identity) - - author-confidence:5.579960694 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:ukTs0PuUe15+QA0bb7roixj3OS010090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8CBE3 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-912188|uniprotkb:Q80Y96|uniprotkb:Q8CCL2|ensembl:ENSMUSP00000021572|ensembl:ENSMUSP00000062174 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:wdr37_mouse(display_long)|uniprotkb:Wdr37(gene name)|psi-mi:Wdr37(display_short)|uniprotkb:Kiaa0982(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001034477.1|refseq:NP_766033.1|refseq:XP_006516532.1|refseq:XP_006516533.1|ensembl:ENSMUSG00000021147(gene)|ensembl:ENSMUST00000021572(transcript)|ensembl:ENSMUST00000054251(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|mint:Q8CBE3|entrezgene/locuslink:207615(identity) - - author-confidence:32.79788797 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:lwhck22UFkJCcpVKLEA90ajEBqc10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q64010 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-2906540|ensembl:ENSMUSP00000017920 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:crk_mouse(display_long)|uniprotkb:Crk(gene name)|psi-mi:Crk(display_short)|uniprotkb:Crko(gene name synonym)|uniprotkb:Proto-oncogene c-Crk(gene name synonym)|uniprotkb:p38(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_598417.2|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|ensembl:ENSMUSG00000017776(gene)|ensembl:ENSMUST00000017920(transcript)|go:"GO:0001764"(neuron migration)|go:"GO:0001784"(phosphotyrosine residue binding)|go:"GO:0001878"(response to yeast)|go:"GO:0006629"(lipid metabolic process)|go:"GO:0008092"(cytoskeletal protein binding)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0002685"(regulation of leukocyte migration)|go:"GO:0009966"(regulation of signal transduction)|go:"GO:0005159"(insulin-like growth factor receptor binding)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016358"(dendrite development)|go:"GO:0017124"(SH3 domain binding)|go:"GO:0019899"(enzyme binding)|go:"GO:0019900"(kinase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021766"(hippocampus development)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030159"(signaling receptor complex adaptor activity)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033628"(regulation of cell adhesion mediated by integrin)|go:"GO:0035020"(regulation of Rac protein signal transduction)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0035728"(response to hepatocyte growth factor)|go:"GO:0038026"(reelin-mediated signaling pathway)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0043087"(regulation of GTPase activity)|go:"GO:0043393"(regulation of protein binding)|go:"GO:0043621"(protein self-association)|go:"GO:0045121"(membrane raft)|go:"GO:0045309"(protein phosphorylated amino acid binding)|go:"GO:0045953"(negative regulation of natural killer cell mediated cytotoxicity)|go:"GO:0046875"(ephrin receptor binding)|go:"GO:0048013"(ephrin receptor signaling pathway)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0060326"(cell chemotaxis)|go:"GO:0061045"(negative regulation of wound healing)|go:"GO:0061847"(response to cholecystokinin)|go:"GO:0071560"(cellular response to transforming growth factor beta stimulus)|go:"GO:0071732"(cellular response to nitric oxide)|go:"GO:0090630"(activation of GTPase activity)|go:"GO:0097110"(scaffold protein binding)|go:"GO:0098749"(cerebellar neuron development)|go:"GO:1900026"(positive regulation of substrate adhesion-dependent cell spreading)|go:"GO:1901652"(response to peptide)|go:"GO:1902531"(regulation of intracellular signal transduction)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|go:"GO:1990314"(cellular response to insulin-like growth factor stimulus)|go:"GO:1990782"(protein tyrosine kinase binding)|go:"GO:1990859"(cellular response to endothelin)|go:"GO:2000146"(negative regulation of cell motility)|go:"GO:2000404"(regulation of T cell migration)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR035457|interpro:IPR035458|interpro:IPR036028|interpro:IPR036860|rcsb pdb:1B07|rcsb pdb:1CKA|rcsb pdb:1CKB|rcsb pdb:1JU5|rcsb pdb:1M30|rcsb pdb:1M3A|rcsb pdb:1M3B|rcsb pdb:1M3C|rcsb pdb:2GGR|rcsb pdb:5IH2|rcsb pdb:5JN0|rcsb pdb:5L23|reactome:R-MMU-170984|reactome:R-MMU-186763|reactome:R-MMU-2029482|reactome:R-MMU-372708|reactome:R-MMU-4420097|reactome:R-MMU-8849471|reactome:R-MMU-8875555|reactome:R-MMU-8875656|reactome:R-MMU-912631|go:"GO:0035685"(helper T cell diapedesis)|dip:DIP-57059N|entrezgene/locuslink:12928(identity) - - author-confidence:14.78760985 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:e9eU7+wkCP5FNnenBlIixVbL7UM10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8R5G7 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-621463|ensembl:ENSMUSP00000035662|uniprotkb:E9QMK7|uniprotkb:Q5DTN4|uniprotkb:Q6NVF1|uniprotkb:Q8R5G6 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:arap3_mouse(display_long)|uniprotkb:Arap3(gene name)|psi-mi:Arap3(display_short)|uniprotkb:Dual specificity Rho- and Arf-GTPase-activating protein 1(gene name synonym)|uniprotkb:Centd3(gene name synonym)|uniprotkb:Centaurin-delta-3(gene name synonym)|uniprotkb:Drag1(gene name synonym)|uniprotkb:Kiaa4097(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) ensembl:ENSMUSG00000024451(gene)|ensembl:ENSMUST00000042944(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005547"(phosphatidylinositol-3,4,5-trisphosphate binding)|interpro:IPR001164(Arf GTPase activating protein)|interpro:IPR001660(Sterile alpha motif SAM)|interpro:IPR001849(Pleckstrin-like)|interpro:IPR008936(Rho GTPase activation protein)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR029071|interpro:IPR037278|interpro:IPR037858|interpro:IPR038508|reactome:R-MMU-8980692|reactome:R-MMU-9013148|reactome:R-MMU-9013149|reactome:R-MMU-9013423|go:"GO:0005737"(cytoplasm)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0007165"(signal transduction)|go:"GO:0030027"(lamellipodium)|go:"GO:0043325"(phosphatidylinositol-3,4-bisphosphate binding)|go:"GO:0043547"(positive regulation of GTPase activity)|interpro:IPR000159(Ras-association)|interpro:IPR000198(RhoGAP)|refseq:NP_001192265.1|refseq:NP_631945.2|refseq:XP_006525552.1|entrezgene/locuslink:106952(identity) - - author-confidence:6.107611488 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:T6pzqRyYhNTPo62IU2JQcqE0rQk10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8CDG3 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-646144|uniprotkb:Q7TMU9|uniprotkb:Q8BP90 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:vcip1_mouse(display_long)|uniprotkb:Valosin-containing protein p97/p47 complex-interacting protein p135(gene name synonym)|uniprotkb:Valosin-containing protein p97/p47 complex-interacting protein 1(gene name synonym)|uniprotkb:Vcpip1(gene name)|psi-mi:Vcpip1(display_short)|uniprotkb:Vcip135(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) interpro:IPR029071|refseq:NP_775619.2|interpro:IPR003323(Ovarian tumour, otubain)|mint:Q8CDG3|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005795"(Golgi stack)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007030"(Golgi organization)|go:"GO:0016320"(endoplasmic reticulum membrane fusion)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0035871"(protein K11-linked deubiquitination)|go:"GO:0045202"(synapse)|go:"GO:0071108"(protein K48-linked deubiquitination)|go:"GO:0090168"(Golgi reassembly)|go:"GO:0106300"(protein-DNA covalent cross-linking repair)|go:"GO:1905634"(regulation of protein localization to chromatin)|reactome:R-MMU-5689896|interpro:IPR039087|entrezgene/locuslink:70675(identity) - - author-confidence:5.940355468 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:jTwHlp3wXtIw4o5+Oqvb47HbKEk10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q3URQ0 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-6910284|ensembl:ENSMUSP00000030030|ensembl:ENSMUSP00000132498 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:tex10_mouse(display_long)|uniprotkb:Tex10(gene name)|psi-mi:Tex10(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:XP_006538018.1|refseq:XP_006538019.1|ensembl:ENSMUSG00000028345(gene)|ensembl:ENSMUST00000030030(transcript)|ensembl:ENSMUST00000164866(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0071339"(MLL1 complex)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR024679|interpro:IPR037947|reactome:R-MMU-6791226|refseq:NP_758508.2|entrezgene/locuslink:269536(identity) - - author-confidence:1.816789506 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:iGocOH1GUrHKJQ3umzAunS1LfLY10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:P62274 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-9987039|ensembl:ENSMUSP00000038352|uniprotkb:P30054 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:rs29_mouse(display_long)|uniprotkb:Rps29(gene name)|psi-mi:Rps29(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) ensembl:ENSMUSG00000034892(gene)|ensembl:ENSMUST00000037023(transcript)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0008270"(zinc ion binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0098556"(cytoplasmic side of rough endoplasmic reticulum membrane)|interpro:IPR001209(Ribosomal protein S14)|interpro:IPR018271|interpro:IPR039744|interpro:IPR043140|reactome:R-MMU-156827|reactome:R-MMU-1799339|reactome:R-MMU-6791226|reactome:R-MMU-72649|reactome:R-MMU-72689|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-975956|reactome:R-MMU-975957|refseq:NP_033119.1|entrezgene/locuslink:20090(identity) - - author-confidence:2.259473527 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:vMgvFs6gwidbpv837yH2u0sSIAU10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q5DU37 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11569031|uniprotkb:Q923B4|uniprotkb:B9EJ71|uniprotkb:Q8CDR8|uniprotkb:Q3TEM9|uniprotkb:Q3V1N3|uniprotkb:Q8BY74|ensembl:ENSMUSP00000021547 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:zfy26_mouse(display_long)|uniprotkb:Kiaa0321(gene name synonym)|uniprotkb:Zfyve26(gene name)|psi-mi:Zfyve26(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001008550.1|ensembl:ENSMUSG00000066440(gene)|ensembl:ENSMUST00000021547(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0030496"(midbody)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0046872"(metal ion binding)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR028730|entrezgene/locuslink:211978(identity) - - author-confidence:5.059806968 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:g7K/XypoTRwki8oHTYjAnU447Y010090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9QXK2 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11568956|uniprotkb:Q9CZB8|ensembl:ENSMUSP00000076341 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:rad18_mouse(display_long)|uniprotkb:Postreplication repair protein RAD18(gene name synonym)|uniprotkb:Rad18sc(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase RAD18(gene name synonym)|uniprotkb:Rad18(gene name)|psi-mi:Rad18(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_067360.2|ensembl:ENSMUSG00000030254(gene)|ensembl:ENSMUST00000077088(transcript)|go:"GO:0000403"(Y-form DNA binding)|go:"GO:0000785"(chromatin)|go:"GO:0001741"(XY body)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0006301"(postreplication repair)|go:"GO:0006513"(protein monoubiquitination)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007283"(spermatogenesis)|go:"GO:0009411"(response to UV)|go:"GO:0016604"(nuclear body)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0035861"(site of double-strand break)|go:"GO:0042405"(nuclear inclusion body)|go:"GO:0042802"(identical protein binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0051984"(positive regulation of chromosome segregation)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0097505"(Rad6-Rad18 complex)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003034(DNA-binding SAP)|interpro:IPR006642(Zinc finger, Rad18-type putative)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR036361|interpro:IPR039577|reactome:R-MMU-110314|reactome:R-MMU-8866654|entrezgene/locuslink:58186(identity) - - author-confidence:2.173971251 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:BLRtgSEXhMs7UjsHlKE8PhKNsr010090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q80XK6 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11566520|uniprotkb:Q9CWK6|uniprotkb:Q8BIV0|uniprotkb:Q8BIQ4|uniprotkb:A0PJL7|uniprotkb:Q8R1H5|ensembl:ENSMUSP00000037441 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:atg2b_mouse(display_long)|uniprotkb:Atg2b(gene name)|psi-mi:Atg2b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569280|imex:IM-24977-36 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_083930.5|ensembl:ENSMUSG00000041341(gene)|ensembl:ENSMUST00000041055(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005811"(lipid droplet)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0044805"(late nucleophagy)|go:"GO:0061709"(reticulophagy)|go:"GO:0120013"(lipid transfer activity)|interpro:IPR015412(ATG2, C-terminal)|interpro:IPR026849|interpro:IPR026854|mint:Q80XK6|entrezgene/locuslink:76559(identity) - - author-confidence:12.2946562 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:jnUVUCip0mX6qajisFBvpNEqixE10090 intact-crc:BA4490455CAC652B|rigid:8CTVNicWRNkZgNlCODhr7WwYCjs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8QZZ8 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) - - author-confidence:31.70724306 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8BFY9 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-3870049|uniprotkb:Q8C0S3|uniprotkb:Q8K2E7|ensembl:ENSMUSP00000105028 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:tnpo1_mouse(display_long)|uniprotkb:Tnpo1(gene name)|psi-mi:Tnpo1(display_short)|uniprotkb:Kpnb2(gene name synonym)|uniprotkb:Importin beta-2(gene name synonym)|uniprotkb:Karyopherin beta-2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001041732.1|refseq:NP_848831.2|refseq:XP_006517699.1|refseq:XP_006517700.1|ensembl:ENSMUSG00000009470(gene)|ensembl:ENSMUST00000109401(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0061608"(nuclear import signal receptor activity)|interpro:IPR001494(Importin-beta, N-terminal)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040122|mint:Q8BFY9|reactome:R-MMU-450513|reactome:R-MMU-5620924|entrezgene/locuslink:238799(identity) - - author-confidence:2.768560152 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:khDQjW/eY+ga9LRUpgOrxbKi6lg10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q99MV7 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-8573659|ensembl:ENSMUSP00000093469|intact:MINT-8174120|uniprotkb:Q4FZG6|uniprotkb:Q3T4H3|uniprotkb:Q3T4H2|uniprotkb:Q9QXQ2|uniprotkb:Q8CDR4 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:rnf17_mouse(display_long)|uniprotkb:Rnf17(gene name)|psi-mi:Rnf17(display_short)|uniprotkb:Mad member-interacting protein 2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) ensembl:ENSMUSG00000000365(gene)|ensembl:ENSMUST00000095793(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0007286"(spermatid development)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR002999(Tudor)|interpro:IPR017907|interpro:IPR035437|interpro:IPR039117|refseq:XP_006519173.1|refseq:XP_006519175.1|refseq:NP_001028215.1|refseq:XP_017171542.1|entrezgene/locuslink:30054(identity) - - comment:mint|author-confidence:2.150944541 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:jysVc6935SGIMm2/CGkiZ69U1SA10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9DC16 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-8338430|intact:MINT-4094160|ensembl:ENSMUSP00000132922 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:ergi1_mouse(display_long)|uniprotkb:Ergic1(gene name)|psi-mi:Ergic1(display_short)|uniprotkb:Ergic32(gene name synonym)|uniprotkb:ER-Golgi intermediate compartment 32 kDa protein(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_080446.1|ensembl:ENSMUSG00000001576(gene)|ensembl:ENSMUST00000167662(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0016020"(membrane)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0030173"(integral component of Golgi membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|interpro:IPR012936(Protein of unknown function DUF1692)|interpro:IPR039542|mint:Q9DC16|entrezgene/locuslink:67458(identity) - - comment:mint|function:Possible role in transport between endoplasmic reticulum and Golgi|author-confidence:8.167520202 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:1sYA2jvGx2+olqrfBQmi5qUjNGg10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8C9B9 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-8340028|uniprotkb:A2AJ47|uniprotkb:Q3ZTP5|uniprotkb:A2AJ48|uniprotkb:Q4V9W1|uniprotkb:Q8BMD0|uniprotkb:Q8BRG2|uniprotkb:Q8CHR5|uniprotkb:B2RS46|uniprotkb:Q6ZQD7|uniprotkb:Q3ZTP6|uniprotkb:Q05C59|uniprotkb:Q80V34|uniprotkb:Q9WV00|intact:MINT-4111472|ensembl:ENSMUSP00000084794 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:dido1_mouse(display_long)|uniprotkb:Dido1(gene name)|psi-mi:Dido1(display_short)|uniprotkb:Datf1(gene name synonym)|uniprotkb:Dio1(gene name synonym)|uniprotkb:Death-associated transcription factor 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_808520.2|refseq:NP_780760.2|refseq:NP_035935.2|refseq:XP_006500671.1|refseq:XP_006500672.1|refseq:XP_006500673.1|refseq:XP_006500674.1|refseq:XP_006500675.1|refseq:XP_006500678.1|refseq:XP_006500679.1|refseq:NP_001278361.1|refseq:NP_001278362.1|ensembl:ENSMUSG00000038914(gene)|ensembl:ENSMUST00000087517(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005819"(spindle)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0097190"(apoptotic signaling pathway)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR003618(Transcription elongation factor S-II, central region)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR012921(Spen paralogue and orthologue C-terminal)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019786|interpro:IPR019787|interpro:IPR033082|interpro:IPR036575|mint:Q8C9B9|rcsb pdb:1WEM|entrezgene/locuslink:23856(identity) - - comment:mint|function:Putative transcription factor, weakly pro-apoptotic when overexpressed|author-confidence:1.940669631 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:dMthBBfD+e96GyEkwCBsH7lsJ/810090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:P15379 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-7565891|intact:EBI-15579519|uniprotkb:Q62063|uniprotkb:Q62061|uniprotkb:Q05732|intact:UNK-5943644|uniprotkb:Q9QYX8|uniprotkb:Q62408|uniprotkb:Q99J14|uniprotkb:Q64296|uniprotkb:Q61395|uniprotkb:Q62060|uniprotkb:Q62062|uniprotkb:Q62409 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:cd44_mouse(display_long)|uniprotkb:Phagocytic glycoprotein I(gene name synonym)|uniprotkb:Cd44(gene name)|psi-mi:Cd44(display_short)|uniprotkb:Ly-24(gene name synonym)|uniprotkb:Phagocytic glycoprotein 1(gene name synonym)|uniprotkb:HUTCH-I(gene name synonym)|uniprotkb:Extracellular matrix receptor III(gene name synonym)|uniprotkb:GP90 lymphocyte homing/adhesion receptor(gene name synonym)|uniprotkb:Hermes antigen(gene name synonym)|uniprotkb:Hyaluronate receptor(gene name synonym)|uniprotkb:Lymphocyte antigen 24(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001171257.1|refseq:NP_001034240.1|refseq:NP_001171258.1|refseq:NP_033981.2|refseq:NP_001171256.1|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001658"(branching involved in ureteric bud morphogenesis)|go:"GO:0002246"(wound healing involved in inflammatory response)|go:"GO:0002821"(positive regulation of adaptive immune response)|go:"GO:0002906"(negative regulation of mature B cell apoptotic process)|go:"GO:0004888"(transmembrane signaling receptor activity)|go:"GO:0005114"(type II transforming growth factor beta receptor binding)|go:"GO:0005154"(epidermal growth factor receptor binding)|go:"GO:0005540"(hyaluronic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005902"(microvillus)|go:"GO:0006954"(inflammatory response)|go:"GO:0007155"(cell adhesion)|go:"GO:0009897"(external side of plasma membrane)|go:"GO:0009986"(cell surface)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0016477"(cell migration)|go:"GO:0019221"(cytokine-mediated signaling pathway)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030214"(hyaluronan catabolic process)|go:"GO:0031175"(neuron projection development)|go:"GO:0031258"(lamellipodium membrane)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033031"(positive regulation of neutrophil apoptotic process)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034116"(positive regulation of heterotypic cell-cell adhesion)|go:"GO:0034238"(macrophage fusion)|go:"GO:0035692"(macrophage migration inhibitory factor receptor complex)|go:"GO:0042110"(T cell activation)|go:"GO:0042995"(cell projection)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043154"(negative regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0043518"(negative regulation of DNA damage response, signal transduction by p53 class mediator)|go:"GO:0044319"(wound healing, spreading of cells)|go:"GO:0044344"(cellular response to fibroblast growth factor stimulus)|go:"GO:0045590"(negative regulation of regulatory T cell differentiation)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050731"(positive regulation of peptidyl-tyrosine phosphorylation)|go:"GO:0051219"(phosphoprotein binding)|go:"GO:0060442"(branching involved in prostate gland morphogenesis)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0070487"(monocyte aggregation)|go:"GO:1900625"(positive regulation of monocyte aggregation)|go:"GO:1902166"(negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator)|go:"GO:2000392"(regulation of lamellipodium morphogenesis)|go:"GO:2000562"(negative regulation of CD4-positive, alpha-beta T cell proliferation)|interpro:IPR000538(Link)|interpro:IPR001231(CD44 antigen)|interpro:IPR016186(C-type lectin-like)|interpro:IPR016187(C-type lectin fold)|interpro:IPR043210|rcsb pdb:2JCP|rcsb pdb:2JCQ|rcsb pdb:5BZJ|rcsb pdb:2JCR|rcsb pdb:5BZK|rcsb pdb:5BZL|rcsb pdb:5BZM|rcsb pdb:5BZN|rcsb pdb:5BZO|rcsb pdb:2ZPY|rcsb pdb:5BZP|rcsb pdb:5BZQ|rcsb pdb:5BZR|rcsb pdb:5BZS|rcsb pdb:5BZT|rcsb pdb:4MRD|rcsb pdb:4MRE|rcsb pdb:4MRF|rcsb pdb:4MRG|rcsb pdb:4MRH|rcsb pdb:4NP2|rcsb pdb:4NP3|rcsb pdb:5BZC|rcsb pdb:5BZE|rcsb pdb:5BZF|rcsb pdb:5BZG|rcsb pdb:5BZH|rcsb pdb:5BZI|dip:DIP-29095N|reactome:R-MMU-1474228|reactome:R-MMU-202733|reactome:R-MMU-216083|reactome:R-MMU-2160916|reactome:R-MMU-6798695|entrezgene/locuslink:12505(identity) - - function:Main cell surface receptor for hyaluronate. Adhesion to mucosal high endothelial venule and to types I and VI collagen. Probably involved in matrix adhesion, lymphocyte activation and lymph node homing|comment:mint|author-confidence:1.917107417 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:1Rlb+aBsm9z0HJuB6Oz4Oilui1o10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8BSY0 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-8366490|uniprotkb:Q9EQ64|intact:MINT-4112262|uniprotkb:Q9EPA6|uniprotkb:Q6P8S1|ensembl:ENSMUSP00000077273 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:asph_mouse(display_long)|uniprotkb:Asph(gene name)|psi-mi:Asph(display_short)|uniprotkb:Aspartate beta-hydroxylase(gene name synonym)|uniprotkb:Peptide-aspartate beta-dioxygenase(gene name synonym)|uniprotkb:Bah(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001171327.1|refseq:NP_001171323.1|refseq:NP_001171326.1|refseq:NP_001171325.1|refseq:NP_001171321.1|refseq:NP_075553.2|refseq:NP_001171324.1|refseq:NP_001277296.1|ensembl:ENSMUSG00000028207(gene)|ensembl:ENSMUST00000078139(transcript)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005886"(plasma membrane)|go:"GO:0007389"(pattern specification process)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010524"(positive regulation of calcium ion transport into cytosol)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0031585"(regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0032237"(activation of store-operated calcium channel activity)|go:"GO:0032541"(cortical endoplasmic reticulum)|go:"GO:0033017"(sarcoplasmic reticulum membrane)|go:"GO:0033198"(response to ATP)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0042264"(peptidyl-aspartic acid hydroxylation)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051480"(regulation of cytosolic calcium ion concentration)|go:"GO:0055074"(calcium ion homeostasis)|go:"GO:0060021"(roof of mouth development)|go:"GO:0060325"(face morphogenesis)|go:"GO:0062101"(peptidyl-aspartic acid 3-dioxygenase activity)|go:"GO:0070588"(calcium ion transmembrane transport)|go:"GO:0071277"(cellular response to calcium ion)|go:"GO:0090316"(positive regulation of intracellular protein transport)|go:"GO:0097202"(activation of cysteine-type endopeptidase activity)|go:"GO:1901879"(regulation of protein depolymerization)|interpro:IPR007803(Aspartyl/Asparaginyl beta-hydroxylase)|interpro:IPR007943(Aspartyl beta-hydroxylase, N-terminal)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR027443|interpro:IPR039038|mint:Q8BSY0|reactome:R-MMU-2672351|reactome:R-MMU-5578775|go:"GO:0045862"(positive regulation of proteolysis)|entrezgene/locuslink:65973(identity) - - comment:mint|function:"Specifically hydroxylates an Asp or Asn residue in certain epidermal growth factor-like (EGF) domains of a number of proteins"|author-confidence:2.270540628 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:x06lMmMmxgaETSn5iGJ/1hScfSI10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:E9QLQ7 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11568979|ensembl:ENSMUSP00000027693|ensembl:ENSMUSP00000108005 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:e9qlq7_mouse(display_long)|uniprotkb:Rab7l1(gene name synonym)|uniprotkb:Rab29(gene name)|psi-mi:Rab29(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_659124.2|ensembl:ENSMUSG00000026433(gene)|ensembl:ENSMUST00000027693(transcript)|ensembl:ENSMUST00000112386(transcript)|go:"GO:0001921"(positive regulation of receptor recycling)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005769"(early endosome)|go:"GO:0005773"(vacuole)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007030"(Golgi organization)|go:"GO:0007416"(synapse assembly)|go:"GO:0009617"(response to bacterium)|go:"GO:0010977"(negative regulation of neuron projection development)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019894"(kinesin binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042110"(T cell activation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0050862"(positive regulation of T cell receptor signaling pathway)|go:"GO:0055037"(recycling endosome)|go:"GO:0070840"(dynein complex binding)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090316"(positive regulation of intracellular protein transport)|go:"GO:1901998"(toxin transport)|go:"GO:1905279"(regulation of retrograde transport, endosome to Golgi)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|entrezgene/locuslink:226422(identity) - - author-confidence:22.58581019 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:5+/XPVrzqtcnmQbbuqN2Spz1rW810090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9ESK9 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-647302|uniprotkb:E9QLQ2|uniprotkb:Q3TXX2|uniprotkb:Q61384|uniprotkb:Q8BRY9|uniprotkb:Q9JK14|ensembl:ENSMUSP00000027040 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:rbcc1_mouse(display_long)|uniprotkb:Coiled-coil-forming protein 1(gene name synonym)|uniprotkb:LaXp180(gene name synonym)|uniprotkb:Rb1cc1(gene name)|psi-mi:Rb1cc1(display_short)|uniprotkb:Cc1(gene name synonym)|uniprotkb:Kiaa0203(gene name synonym)|uniprotkb:FAK family kinase-interacting protein of 200 kDa(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_033956.2|dip:DIP-49679N|ensembl:ENSMUSG00000025907(gene)|ensembl:ENSMUST00000027040(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001889"(liver development)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005829"(cytosol)|go:"GO:0006914"(autophagy)|go:"GO:0007049"(cell cycle)|go:"GO:0007507"(heart development)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0045793"(positive regulation of cell size)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0061709"(reticulophagy)|go:"GO:0061723"(glycophagy)|go:"GO:1990316"(Atg1/ULK1 kinase complex)|go:"GO:2001237"(negative regulation of extrinsic apoptotic signaling pathway)|interpro:IPR019460|interpro:IPR040040|mint:Q9ESK9|reactome:R-MMU-1632852|entrezgene/locuslink:12421(identity) - - author-confidence:65.27625803 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:DiOKxKS7K4NtKX4DqF9ZtpkcOcc10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9QXK2 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11568956|uniprotkb:Q9CZB8|ensembl:ENSMUSP00000076341 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:rad18_mouse(display_long)|uniprotkb:Postreplication repair protein RAD18(gene name synonym)|uniprotkb:Rad18sc(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase RAD18(gene name synonym)|uniprotkb:Rad18(gene name)|psi-mi:Rad18(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_067360.2|ensembl:ENSMUSG00000030254(gene)|ensembl:ENSMUST00000077088(transcript)|go:"GO:0000403"(Y-form DNA binding)|go:"GO:0000785"(chromatin)|go:"GO:0001741"(XY body)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0006301"(postreplication repair)|go:"GO:0006513"(protein monoubiquitination)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007283"(spermatogenesis)|go:"GO:0009411"(response to UV)|go:"GO:0016604"(nuclear body)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0035861"(site of double-strand break)|go:"GO:0042405"(nuclear inclusion body)|go:"GO:0042802"(identical protein binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0051984"(positive regulation of chromosome segregation)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0097505"(Rad6-Rad18 complex)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003034(DNA-binding SAP)|interpro:IPR006642(Zinc finger, Rad18-type putative)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR036361|interpro:IPR039577|reactome:R-MMU-110314|reactome:R-MMU-8866654|entrezgene/locuslink:58186(identity) - - author-confidence:2.324091114 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:BLRtgSEXhMs7UjsHlKE8PhKNsr010090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q99N57 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-397757|ensembl:ENSMUSP00000000451|ensembl:ENSMUSP00000108571|uniprotkb:Q3UR68|uniprotkb:Q58E75|uniprotkb:Q99N58|uniprotkb:Q9QUU8|uniprotkb:Q91WH1 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:raf1_mouse(display_long)|uniprotkb:Raf1(gene name)|psi-mi:Raf1(display_short)|uniprotkb:Craf(gene name synonym)|uniprotkb:Proto-oncogene c-RAF(gene name synonym)|uniprotkb:Raf-1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) go:"GO:0046872"(metal ion binding)|go:"GO:0048011"(neurotrophin TRK receptor signaling pathway)|go:"GO:0048538"(thymus development)|go:"GO:0060324"(face development)|go:"GO:0071550"(death-inducing signaling complex assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010856"(adenylate cyclase activator activity)|go:"GO:0016607"(nuclear speck)|go:"GO:0019899"(enzyme binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0030878"(thyroid gland development)|go:"GO:0031143"(pseudopodium)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031333"(negative regulation of protein-containing complex assembly)|go:"GO:0031434"(mitogen-activated protein kinase kinase binding)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0035019"(somatic stem cell population maintenance)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035773"(insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0035994"(response to muscle stretch)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045104"(intermediate filament cytoskeleton organization)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:1902042"(negative regulation of extrinsic apoptotic signaling pathway via death domain receptors)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001245(Tyrosine protein kinase)|interpro:IPR002219(Protein kinase C, phorbol ester/diacylglycerol binding)|interpro:IPR003116(Raf-like Ras-binding)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR020454|interpro:IPR029071|reactome:R-MMU-2672351|reactome:R-MMU-392517|reactome:R-MMU-430116|reactome:R-MMU-5621575|reactome:R-MMU-5673000|reactome:R-MMU-5674135|reactome:R-MMU-5674499|reactome:R-MMU-5675221|ensembl:ENSMUSG00000000441(gene)|ensembl:ENSMUST00000000451(transcript)|ensembl:ENSMUST00000112949(transcript)|go:"GO:0000165"(MAPK cascade)|go:"GO:0000186"(obsolete activation of MAPKK activity)|go:"GO:0001666"(response to hypoxia)|go:"GO:0001678"(cellular glucose homeostasis)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004709"(MAP kinase kinase kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007190"(activation of adenylate cyclase activity)|go:"GO:0007507"(heart development)|go:"GO:0008179"(adenylate cyclase binding)|refseq:NP_084056.1|refseq:XP_006505426.1|refseq:XP_006505427.1|refseq:XP_006505428.1|dip:DIP-31555N|entrezgene/locuslink:110157(identity) - - author-confidence:8.635908457 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:FWjmgYQQijkiYwX+3kKeYh6xfNA10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q3TBD2 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11569517|uniprotkb:Q8BI83|uniprotkb:Q3TSW0|uniprotkb:Q3TXM6|uniprotkb:Q3UZ72|uniprotkb:Q3TDD2|uniprotkb:Q9CU46 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:hmha1_mouse(display_long)|uniprotkb:Arhgap45(gene name)|psi-mi:Arhgap45(display_short)|uniprotkb:Hmha1(gene name synonym)|uniprotkb:Minor histocompatibility protein HA-1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) interpro:IPR027267|reactome:R-MMU-6798695|reactome:R-MMU-8980692|reactome:R-MMU-9013148|reactome:R-MMU-9013149|interpro:IPR000198(RhoGAP)|interpro:IPR001060(Cdc15/Fes/CIP4)|interpro:IPR002219(Protein kinase C, phorbol ester/diacylglycerol binding)|interpro:IPR008936(Rho GTPase activation protein)|interpro:IPR031160|refseq:NP_001136173.1|refseq:NP_081797.1|refseq:NP_001334003.1|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0032587"(ruffle membrane)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0046872"(metal ion binding)|go:"GO:0090630"(activation of GTPase activity)|entrezgene/locuslink:70719(identity) - - author-confidence:2.930996628 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:qRGZ7VRf87D+9YlzAdWJNGJJ6Bg10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q91VW5 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-643481|uniprotkb:O70365|uniprotkb:Q8CGH6|ensembl:ENSMUSP00000081880 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:goga4_mouse(display_long)|uniprotkb:tGolgin-1(gene name synonym)|uniprotkb:Golga4(gene name)|psi-mi:Golga4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) ensembl:ENSMUSG00000038708(gene)|ensembl:ENSMUST00000084820(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0031267"(small GTPase binding)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045773"(positive regulation of axon extension)|go:"GO:0048193"(Golgi vesicle transport)|go:"GO:0051020"(GTPase binding)|interpro:IPR000237(GRIP)|reactome:R-MMU-6811440|refseq:NP_061218.2|entrezgene/locuslink:54214(identity) - - author-confidence:1.014424716 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:pK5clT3BtNvFt3T/mXdqAHaCmDA10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q01965 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11569501|uniprotkb:Q9ES35|uniprotkb:Q9ES36|uniprotkb:Q9ES29|ensembl:ENSMUSP00000069319 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:ly9_mouse(display_long)|uniprotkb:Cell surface molecule Ly-9(gene name synonym)|uniprotkb:Ly-9(gene name synonym)|uniprotkb:Lymphocyte antigen 9(gene name synonym)|uniprotkb:SLAM family member 3(gene name synonym)|uniprotkb:Signaling lymphocytic activation molecule 3(gene name synonym)|uniprotkb:Ly9(gene name)|psi-mi:Ly9(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001264897.1|refseq:NP_032560.2|ensembl:ENSMUSG00000004707(gene)|ensembl:ENSMUST00000068878(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0007155"(cell adhesion)|go:"GO:0009986"(cell surface)|go:"GO:0016021"(integral component of membrane)|go:"GO:0032740"(positive regulation of interleukin-17 production)|go:"GO:0045087"(innate immune response)|go:"GO:0072540"(T-helper 17 cell lineage commitment)|interpro:IPR003599(Immunoglobulin subtype)|interpro:IPR007110(Immunoglobulin-like)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR036179|entrezgene/locuslink:17085(identity) - - author-confidence:1.379282031 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:u1JQR4GuNJZc0Cu1WPQRzpiPPJA10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q11127 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11569508|ensembl:ENSMUSP00000053027 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:fut4_mouse(display_long)|uniprotkb:Elft(gene name synonym)|uniprotkb:Fucosyltransferase 4(gene name synonym)|uniprotkb:Fucosyltransferase IV(gene name synonym)|uniprotkb:Galactoside 3-L-fucosyltransferase(gene name synonym)|uniprotkb:Fut4(gene name)|psi-mi:Fut4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_034372.1|ensembl:ENSMUSG00000049307(gene)|ensembl:ENSMUST00000061498(transcript)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006486"(protein glycosylation)|go:"GO:0009311"(oligosaccharide metabolic process)|go:"GO:0009986"(cell surface)|go:"GO:0016021"(integral component of membrane)|go:"GO:0017083"(4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0036065"(fucosylation)|go:"GO:0046920"("alpha-(1->3)-fucosyltransferase activity")|go:"GO:0071944"(cell periphery)|go:"GO:1903037"(regulation of leukocyte cell-cell adhesion)|go:"GO:1903238"(positive regulation of leukocyte tethering or rolling)|interpro:IPR001503(Glycosyl transferase, family 10)|interpro:IPR031481|interpro:IPR038577|reactome:R-MMU-9037629|entrezgene/locuslink:14345(identity) - - author-confidence:6.107611488 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:SlmTCPMSGlPzagV3gERg4ig+hU410090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q5SSL4 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-2310685|uniprotkb:Q3U5G0|uniprotkb:Q3UQJ6|uniprotkb:Q3UY38|uniprotkb:Q5SYJ5|uniprotkb:Q5SYJ7|uniprotkb:Q5SYJ8|uniprotkb:Q5SYJ9|uniprotkb:Q6PCY1|uniprotkb:Q6PDH3|ensembl:ENSMUSP00000072522 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:abr_mouse(display_long)|uniprotkb:Abr(gene name)|psi-mi:Abr(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001333599.1|refseq:NP_001278115.1|refseq:NP_942597.1|refseq:NP_932135.1|refseq:NP_942598.1|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0007420"(brain development)|go:"GO:0016020"(membrane)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030336"(negative regulation of cell migration)|go:"GO:0030424"(axon)|go:"GO:0032496"(response to lipopolysaccharide)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0042472"(inner ear morphogenesis)|go:"GO:0043114"(regulation of vascular permeability)|go:"GO:0043197"(dendritic spine)|go:"GO:0043314"(negative regulation of neutrophil degranulation)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050766"(positive regulation of phagocytosis)|go:"GO:0050804"(modulation of chemical synaptic transmission)|go:"GO:0050885"(neuromuscular process controlling balance)|go:"GO:0060313"(negative regulation of blood vessel remodeling)|go:"GO:0090630"(activation of GTPase activity)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099092"(postsynaptic density, intracellular component)|interpro:IPR000008(C2 calcium-dependent membrane targeting)|interpro:IPR000198(RhoGAP)|interpro:IPR000219("Dbl homology (DH) domain")|interpro:IPR001331(Guanine-nucleotide dissociation stimulator, CDC24, conserved site)|interpro:IPR001849(Pleckstrin-like)|interpro:IPR008936(Rho GTPase activation protein)|interpro:IPR035892|interpro:IPR035899|interpro:IPR037769|interpro:IPR037865|reactome:R-MMU-193648|reactome:R-MMU-416482|reactome:R-MMU-8980692|reactome:R-MMU-9013026|reactome:R-MMU-9013106|reactome:R-MMU-9013148|reactome:R-MMU-9013149|reactome:R-MMU-9013404|reactome:R-MMU-9013423|ensembl:ENSMUSG00000017631(gene)|ensembl:ENSMUST00000072740(transcript)|go:"GO:0002692"(negative regulation of cellular extravasation)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|entrezgene/locuslink:109934(identity) - - author-confidence:15.07089192 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:rkYDNM1hPvcrtB4OrgtHGMK0NTs10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:A2A9M5 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11566645|ensembl:ENSMUSP00000030286 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:a2a9m5_mouse(display_long)|uniprotkb:Dock7(gene name)|psi-mi:Dock7(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001277565.1|ensembl:ENSMUSG00000028556(gene)|ensembl:ENSMUST00000030286(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|interpro:IPR035892|interpro:IPR037808|interpro:IPR043161|interpro:IPR043162|go:"GO:0007264"(small GTPase mediated signal transduction)|interpro:IPR010703(Dedicator of cytokinesis)|interpro:IPR021816|interpro:IPR026791|interpro:IPR027007|interpro:IPR027357|entrezgene/locuslink:67299(identity) - - author-confidence:2.502592736 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:CgSJgOizdJ+BnXU1KgXekQUqrpw10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q640N3 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-4326075|uniprotkb:E9QKX0|uniprotkb:Q571I5 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:rhg30_mouse(display_long)|uniprotkb:Arhgap30(gene name)|psi-mi:Arhgap30(display_short)|uniprotkb:Rho-type GTPase-activating protein 30(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001005508.2|interpro:IPR008936(Rho GTPase activation protein)|interpro:IPR000198(RhoGAP)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0043231"(intracellular membrane-bounded organelle)|reactome:R-MMU-8980692|reactome:R-MMU-9013148|reactome:R-MMU-9013149|reactome:R-MMU-9013420|entrezgene/locuslink:226652(identity) - - author-confidence:7.454227722 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:6ThouE4dmXi8MQuZ6odULeofha010090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:B2RXR6 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11566298|uniprotkb:B2RXN6|uniprotkb:B7ZWK8|ensembl:ENSMUSP00000137616 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:anr44_mouse(display_long)|uniprotkb:Ankyrin repeat domain-containing protein 44(gene name synonym)|uniprotkb:Ankrd44(gene name)|psi-mi:Ankrd44(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001074902.2|ensembl:ENSMUSG00000052331(gene)|ensembl:ENSMUST00000179030(transcript)|interpro:IPR002110(Ankyrin)|interpro:IPR020683|interpro:IPR036770|entrezgene/locuslink:329154(identity) - - author-confidence:3.484351655 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:u2gh8Mr3OLcC72DfwHC0bMCFj3c10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q6ZPR5 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11568983|uniprotkb:Q8R0J3|uniprotkb:Q3TPP1|uniprotkb:Q8CD83|uniprotkb:Q9CX74|uniprotkb:Q3TPE0|uniprotkb:Q8CD12|uniprotkb:Q8CBJ5|ensembl:ENSMUSP00000006053 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:nsma3_mouse(display_long)|uniprotkb:Kiaa1418(gene name synonym)|uniprotkb:Neutral sphingomyelinase 3(gene name synonym)|uniprotkb:Neutral sphingomyelinase III(gene name synonym)|uniprotkb:Smpd4(gene name)|psi-mi:Smpd4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001158081.1|refseq:NP_001158082.1|refseq:NP_001158083.1|refseq:NP_084221.2|refseq:XP_006522785.1|ensembl:ENSMUSG00000005899(gene)|ensembl:ENSMUST00000006053(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0004767"(sphingomyelin phosphodiesterase activity)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005640"(nuclear outer membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006685"(sphingomyelin catabolic process)|go:"GO:0007029"(endoplasmic reticulum organization)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042383"(sarcolemma)|go:"GO:0046475"(glycerophospholipid catabolic process)|go:"GO:0046513"(ceramide biosynthetic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0050290"(sphingomyelin phosphodiesterase D activity)|interpro:IPR024129|go:"GO:0071356"(cellular response to tumor necrosis factor)|reactome:R-MMU-1660662|entrezgene/locuslink:77626(identity) - - author-confidence:1.306631871 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:Ar6EgV2x1pyN/3pkiUiOEUZhUjQ10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q5DU37 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11569031|uniprotkb:Q923B4|uniprotkb:B9EJ71|uniprotkb:Q8CDR8|uniprotkb:Q3TEM9|uniprotkb:Q3V1N3|uniprotkb:Q8BY74|ensembl:ENSMUSP00000021547 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:zfy26_mouse(display_long)|uniprotkb:Kiaa0321(gene name synonym)|uniprotkb:Zfyve26(gene name)|psi-mi:Zfyve26(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001008550.1|ensembl:ENSMUSG00000066440(gene)|ensembl:ENSMUST00000021547(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0030496"(midbody)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0046872"(metal ion binding)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR028730|entrezgene/locuslink:211978(identity) - - author-confidence:5.986944391 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:g7K/XypoTRwki8oHTYjAnU447Y010090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9WV55 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-645974|uniprotkb:Q9QY77|uniprotkb:Q3TJM1|ensembl:ENSMUSP00000024897 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:vapa_mouse(display_long)|uniprotkb:33 kDa VAMP-associated protein(gene name synonym)|uniprotkb:Vapa(gene name)|psi-mi:Vapa(display_short)|uniprotkb:Vap33(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_038961.2|ensembl:ENSMUSG00000024091(gene)|ensembl:ENSMUST00000024897(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0008017"(microtubule binding)|go:"GO:0008219"(cell death)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031175"(neuron projection development)|go:"GO:0031965"(nuclear membrane)|go:"GO:0031982"(vesicle)|go:"GO:0033149"(FFAT motif binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0044791"(obsolete positive regulation by host of viral release from host cell)|go:"GO:0044828"(negative regulation by host of viral genome replication)|go:"GO:0044829"(positive regulation by host of viral genome replication)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0070972"(protein localization to endoplasmic reticulum)|go:"GO:0090114"(COPII-coated vesicle budding)|interpro:IPR000535(Major sperm protein)|interpro:IPR008962(PapD-like)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR016763(Vesicle-associated membrane protein)|mint:Q9WV55|rcsb pdb:2CRI|reactome:R-MMU-1660661|reactome:R-MMU-6798695|reactome:R-MMU-9609523|entrezgene/locuslink:30960(identity) - - author-confidence:1.069224714 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:LQV6uN7oD/EpHQvexl/pGkG6bmE10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9Z1W8 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11568972|uniprotkb:Q8VHY2|uniprotkb:Q32MR8|ensembl:ENSMUSP00000007340 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:at12a_mouse(display_long)|uniprotkb:Atp1al1(gene name synonym)|uniprotkb:"Non-gastric H(+)/K(+) ATPase subunit alpha"(gene name synonym)|uniprotkb:Proton pump(gene name synonym)|uniprotkb:Atp12a(gene name)|psi-mi:Atp12a(display_short)|uniprotkb:HK alpha 2(gene name synonym)|uniprotkb:"Non-gastric Na(+)/K(+) ATPase subunit alpha"(gene name synonym)|uniprotkb:Sodium pump(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_619593.2|ensembl:ENSMUSG00000022229(gene)|ensembl:ENSMUST00000007340(transcript)|go:"GO:0005391"("P-type sodium:potassium-exchanging transporter activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006883"(cellular sodium ion homeostasis)|go:"GO:0006885"(regulation of pH)|go:"GO:0008900"("P-type potassium:proton transporter activity")|go:"GO:0010038"(response to metal ion)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0030007"(cellular potassium ion homeostasis)|go:"GO:0036376"(sodium ion export across plasma membrane)|go:"GO:0046872"(metal ion binding)|go:"GO:0055075"(potassium ion homeostasis)|go:"GO:1902600"(proton transmembrane transport)|go:"GO:1990573"(potassium ion import across plasma membrane)|interpro:IPR001757(ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter)|interpro:IPR004014(ATPase, P-type cation-transporter, N-terminal)|interpro:IPR005775(ATPase, P-type cation exchange, alpha subunit, eukaryotic)|interpro:IPR006068(ATPase, P-type cation-transporter, C-terminal)|interpro:IPR008250(E1-E2 ATPase-associated region)|interpro:IPR018303|interpro:IPR023214|interpro:IPR023298|interpro:IPR023299|interpro:IPR030318|interpro:IPR036412|interpro:IPR044492|reactome:R-MMU-936837|entrezgene/locuslink:192113(identity) - - author-confidence:2.559713255 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:UhIAcoKBKEPYftd/IFfswIMseVE10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q80WG7 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11569512|uniprotkb:Q7TNM1|ensembl:ENSMUSP00000037978 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:tri36_mouse(display_long)|uniprotkb:Acrosome RBCC protein(gene name synonym)|uniprotkb:Haprin(gene name synonym)|uniprotkb:Tripartite motif-containing protein 36(gene name synonym)|uniprotkb:Trim36(gene name)|psi-mi:Trim36(display_short)|uniprotkb:RING-type E3 ubiquitin transferase TRIM36(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001164326.1|refseq:NP_849203.2|ensembl:ENSMUSG00000033949(gene)|ensembl:ENSMUST00000037011(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0001578"(microtubule bundle formation)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0007051"(spindle organization)|go:"GO:0007340"(acrosome reaction)|go:"GO:0008270"(zinc ion binding)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0043014"(alpha-tubulin binding)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0070507"(regulation of microtubule cytoskeleton organization)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003961(Fibronectin, type III)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR017903|interpro:IPR017907|interpro:IPR027370|interpro:IPR027726|interpro:IPR035727|interpro:IPR036116|interpro:IPR040859|interpro:IPR043136|reactome:R-MMU-983168|entrezgene/locuslink:28105(identity) - - author-confidence:1.553856617 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:0bcXLArAIG96Q0dgnjSw+aRvGR410090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:O55222 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-6690138|uniprotkb:Q78KK2|ensembl:ENSMUSP00000033182|ensembl:ENSMUSP00000130341 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:ilk_mouse(display_long)|uniprotkb:59 kDa serine/threonine-protein kinase(gene name synonym)|uniprotkb:Beta-integrin-linked kinase(gene name synonym)|uniprotkb:ILK-1(gene name synonym)|uniprotkb:ILK-2(gene name synonym)|uniprotkb:ILK1(gene name synonym)|uniprotkb:ILK2(gene name synonym)|uniprotkb:p59ILK(gene name synonym)|uniprotkb:Ilk(gene name)|psi-mi:Ilk(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001155196.1|refseq:NP_034692.2|ensembl:ENSMUSG00000030890(gene)|ensembl:ENSMUST00000033182(transcript)|ensembl:ENSMUST00000163389(transcript)|go:"GO:0000902"(cell morphogenesis)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001658"(branching involved in ureteric bud morphogenesis)|go:"GO:0001725"(stress fiber)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0001954"(positive regulation of cell-matrix adhesion)|go:"GO:0003151"(outflow tract morphogenesis)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005178"(integrin binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005925"(focal adhesion)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007160"(cell-matrix adhesion)|go:"GO:0007229"(integrin-mediated signaling pathway)|go:"GO:0007569"(cell aging)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0009967"(positive regulation of signal transduction)|go:"GO:0010667"(negative regulation of cardiac muscle cell apoptotic process)|go:"GO:0010761"(fibroblast migration)|go:"GO:0014044"(Schwann cell development)|go:"GO:0014912"(negative regulation of smooth muscle cell migration)|go:"GO:0017124"(SH3 domain binding)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021675"(nerve development)|go:"GO:0022011"(myelination in peripheral nervous system)|go:"GO:0030017"(sarcomere)|go:"GO:0030027"(lamellipodium)|go:"GO:0030030"(cell projection organization)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030424"(axon)|go:"GO:0030513"(positive regulation of BMP signaling pathway)|go:"GO:0032288"(myelin assembly)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042327"(positive regulation of phosphorylation)|go:"GO:0043034"(costamere)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043195"(terminal bouton)|go:"GO:0043198"(dendritic shaft)|go:"GO:0043406"(positive regulation of MAP kinase activity)|go:"GO:0043410"(positive regulation of MAPK cascade)|go:"GO:0043491"(protein kinase B signaling)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045197"(establishment or maintenance of epithelial cell apical/basal polarity)|go:"GO:0045663"(positive regulation of myoblast differentiation)|go:"GO:0045669"(positive regulation of osteoblast differentiation)|go:"GO:0045773"(positive regulation of axon extension)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0048662"(negative regulation of smooth muscle cell proliferation)|go:"GO:0048812"(neuron projection morphogenesis)|go:"GO:0043025"(neuronal cell body)|go:"GO:0050772"(positive regulation of axonogenesis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:0097435"(supramolecular fiber organization)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1900026"(positive regulation of substrate adhesion-dependent cell spreading)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:2000178"(negative regulation of neural precursor cell proliferation)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001245(Tyrosine protein kinase)|interpro:IPR002110(Ankyrin)|interpro:IPR011009(Protein kinase-like)|interpro:IPR020683|interpro:IPR035692|interpro:IPR036770|mint:O55222|reactome:R-MMU-446343|reactome:R-MMU-446353|dip:DIP-41971N|entrezgene/locuslink:16202(identity) - - author-confidence:9.476651095 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:9kMagkwUrtq1XaI+9PXPJ21hHY810090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:P68373 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-3647590|uniprotkb:P05216|uniprotkb:Q9CSE9|ensembl:ENSMUSP00000051033 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:tba1c_mouse(display_long)|uniprotkb:Tuba1c(gene name)|psi-mi:Tuba1c(display_short)|uniprotkb:Tuba6(gene name synonym)|uniprotkb:Alpha-tubulin 6(gene name synonym)|uniprotkb:Alpha-tubulin isotype M-alpha-6(gene name synonym)|uniprotkb:Tubulin alpha-6 chain(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_033474.1|ensembl:ENSMUSG00000043091(gene)|ensembl:ENSMUST00000058914(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005874"(microtubule)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0045121"(membrane raft)|interpro:IPR000217(Tubulin)|interpro:IPR002452(Alpha tubulin)|interpro:IPR003008(Tubulin/FtsZ, GTPase)|interpro:IPR008280(Tubulin/FtsZ, C-terminal)|interpro:IPR017975|interpro:IPR018316|interpro:IPR023123|interpro:IPR036525|interpro:IPR037103|mint:P68373|reactome:R-MMU-190840|reactome:R-MMU-2132295|reactome:R-MMU-2467813|reactome:R-MMU-2500257|reactome:R-MMU-3371497|reactome:R-MMU-380320|reactome:R-MMU-437239|reactome:R-MMU-5610787|reactome:R-MMU-5617833|reactome:R-MMU-5620924|reactome:R-MMU-5626467|reactome:R-MMU-5663220|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-6811436|reactome:R-MMU-68877|reactome:R-MMU-8852276|reactome:R-MMU-8955332|reactome:R-MMU-9646399|reactome:R-MMU-9648025|reactome:R-MMU-9668328|reactome:R-MMU-983189|go:"GO:0005881"(cytoplasmic microtubule)|entrezgene/locuslink:22146(identity) - - author-confidence:2.868521061 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:/v0eESwae8IubY6sq0wcTeeXHaQ10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q9CZE3 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) - - author-confidence:25.63283287 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8BLR5 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11569537|uniprotkb:Q3UD59|uniprotkb:Q80V44|uniprotkb:Q3TQF5|uniprotkb:Q3TE33|uniprotkb:Q3UFH9|uniprotkb:A2AIU4|ensembl:ENSMUSP00000062415|ensembl:ENSMUSP00000100006|ensembl:ENSMUSP00000132395 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:psd4_mouse(display_long)|uniprotkb:Pleckstrin homology and SEC7 domain-containing protein 4(gene name synonym)|uniprotkb:Efa6b(gene name synonym)|uniprotkb:Exchange factor for ADP-ribosylation factor guanine nucleotide factor 6 B(gene name synonym)|uniprotkb:Psd4(gene name)|psi-mi:Psd4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:XP_017172556.1|refseq:NP_808279.1|refseq:XP_006497894.1|refseq:XP_006497895.1|refseq:XP_006497896.1|refseq:XP_006497897.1|refseq:XP_006497898.1|refseq:XP_006497899.1|refseq:XP_011237351.1|ensembl:ENSMUSG00000026979(gene)|ensembl:ENSMUST00000056641(transcript)|ensembl:ENSMUST00000102942(transcript)|ensembl:ENSMUST00000166388(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0008289"(lipid binding)|go:"GO:0032012"(regulation of ARF protein signal transduction)|interpro:IPR000904(SEC7-like)|interpro:IPR001849(Pleckstrin-like)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR023394|go:"GO:0032587"(ruffle membrane)|interpro:IPR035999|interpro:IPR041681|entrezgene/locuslink:215632(identity) - - author-confidence:1.134734809 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:gPAPMFsYibtoDqffkohi0Y6ynXw10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q80XK6 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11566520|uniprotkb:Q9CWK6|uniprotkb:Q8BIV0|uniprotkb:Q8BIQ4|uniprotkb:A0PJL7|uniprotkb:Q8R1H5|ensembl:ENSMUSP00000037441 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:atg2b_mouse(display_long)|uniprotkb:Atg2b(gene name)|psi-mi:Atg2b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_083930.5|ensembl:ENSMUSG00000041341(gene)|ensembl:ENSMUST00000041055(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005811"(lipid droplet)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0044805"(late nucleophagy)|go:"GO:0061709"(reticulophagy)|go:"GO:0120013"(lipid transfer activity)|interpro:IPR015412(ATG2, C-terminal)|interpro:IPR026849|interpro:IPR026854|mint:Q80XK6|entrezgene/locuslink:76559(identity) - - author-confidence:9.610527312 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:jnUVUCip0mX6qajisFBvpNEqixE10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:P54987 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11569530|uniprotkb:Q3U8E8|uniprotkb:Q8CBA6|uniprotkb:Q3TAA1 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:irg1_mouse(display_long)|uniprotkb:Acod1(gene name)|psi-mi:Acod1(display_short)|uniprotkb:Aconitate decarboxylase(gene name synonym)|uniprotkb:Aconitate decarboxylase 1(gene name synonym)|uniprotkb:Cis-aconitic acid decarboxylase(gene name synonym)|uniprotkb:Immune-responsive gene 1 protein(gene name synonym)|uniprotkb:Irg1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) interpro:IPR005656(MmgE/PrpD)|refseq:NP_032418.1|interpro:IPR042188|interpro:IPR042183|go:"GO:0002760"(positive regulation of antimicrobial humoral response)|go:"GO:0005739"(mitochondrion)|go:"GO:0006952"(defense response)|go:"GO:0006954"(inflammatory response)|go:"GO:0007566"(embryo implantation)|go:"GO:0009617"(response to bacterium)|go:"GO:0032088"(negative regulation of NF-kappaB transcription factor activity)|go:"GO:0032480"(negative regulation of type I interferon production)|go:"GO:0032496"(response to lipopolysaccharide)|go:"GO:0034136"(negative regulation of toll-like receptor 2 signaling pathway)|go:"GO:0034144"(negative regulation of toll-like receptor 4 signaling pathway)|go:"GO:0035458"(cellular response to interferon-beta)|go:"GO:0045824"(negative regulation of innate immune response)|go:"GO:0047613"(aconitate decarboxylase activity)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0051607"(defense response to virus)|go:"GO:0071219"(cellular response to molecule of bacterial origin)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071346"(cellular response to interferon-gamma)|go:"GO:0071347"(cellular response to interleukin-1)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071393"(cellular response to progesterone stimulus)|go:"GO:0072573"(tolerance induction to lipopolysaccharide)|go:"GO:2000379"(positive regulation of reactive oxygen species metabolic process)|interpro:IPR036148|rcsb pdb:6R6T|entrezgene/locuslink:16365(identity) - - author-confidence:172.9696779 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:SunD3XRzws6x5pF1/npfHeH4knE10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8CFZ4 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11566294|ensembl:ENSMUSP00000064131 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:gpc3_mouse(display_long)|uniprotkb:Gpc3(gene name)|psi-mi:Gpc3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_057906.2|ensembl:ENSMUSG00000055653(gene)|ensembl:ENSMUST00000069360(transcript)|go:"GO:0001658"(branching involved in ureteric bud morphogenesis)|go:"GO:0001822"(kidney development)|go:"GO:0005764"(lysosome)|go:"GO:0005796"(Golgi lumen)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009617"(response to bacterium)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0009948"(anterior/posterior axis specification)|go:"GO:0009986"(cell surface)|go:"GO:0010171"(body morphogenesis)|go:"GO:0010466"(negative regulation of peptidase activity)|go:"GO:0016477"(cell migration)|go:"GO:0030282"(bone mineralization)|go:"GO:0030316"(osteoclast differentiation)|go:"GO:0030324"(lung development)|go:"GO:0030513"(positive regulation of BMP signaling pathway)|go:"GO:0035116"(embryonic hindlimb morphogenesis)|go:"GO:0040008"(regulation of growth)|go:"GO:0042074"(cell migration involved in gastrulation)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0045807"(positive regulation of endocytosis)|go:"GO:0045879"(negative regulation of smoothened signaling pathway)|go:"GO:0045880"(positive regulation of smoothened signaling pathway)|go:"GO:0045926"(negative regulation of growth)|go:"GO:0046326"(positive regulation of glucose import)|go:"GO:0046658"(anchored component of plasma membrane)|go:"GO:0050680"(negative regulation of epithelial cell proliferation)|go:"GO:0060422"(peptidyl-dipeptidase inhibitor activity)|go:"GO:0060828"(regulation of canonical Wnt signaling pathway)|go:"GO:0060976"(coronary vasculature development)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0072111"(cell proliferation involved in kidney development)|go:"GO:0072138"(mesenchymal cell proliferation involved in ureteric bud development)|go:"GO:0072180"(mesonephric duct morphogenesis)|go:"GO:0072203"(cell proliferation involved in metanephros development)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:1905475"(regulation of protein localization to membrane)|go:"GO:2000050"(regulation of non-canonical Wnt signaling pathway)|go:"GO:2000096"(positive regulation of Wnt signaling pathway, planar cell polarity pathway)|interpro:IPR001863(Glypican)|interpro:IPR015501(Glypican 3)|interpro:IPR019803|reactome:R-MMU-1971475|reactome:R-MMU-2022928|reactome:R-MMU-2024096|reactome:R-MMU-381426|reactome:R-MMU-8957275|reactome:R-MMU-975634|entrezgene/locuslink:14734(identity) - - author-confidence:1.486740007 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:HmsJuKaE1Tz2SqFkBWtuN9PONDA10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:P06684 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-6879391|ensembl:ENSMUSP00000028233|uniprotkb:A2AS36 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:co5_mouse(display_long)|uniprotkb:C5(gene name)|psi-mi:C5(display_short)|uniprotkb:Hc(gene name synonym)|uniprotkb:Hemolytic complement(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) ensembl:ENSMUSG00000026874(gene)|ensembl:ENSMUST00000028233(transcript)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0004866"(endopeptidase inhibitor activity)|go:"GO:0005579"(membrane attack complex)|go:"GO:0005615"(extracellular space)|go:"GO:0006954"(inflammatory response)|go:"GO:0006957"(complement activation, alternative pathway)|go:"GO:0006958"(complement activation, classical pathway)|go:"GO:0010575"(positive regulation of vascular endothelial growth factor production)|go:"GO:0010760"(negative regulation of macrophage chemotaxis)|go:"GO:0019835"(cytolysis)|go:"GO:0032722"(positive regulation of chemokine production)|go:"GO:0045766"(positive regulation of angiogenesis)|interpro:IPR000020(Anaphylatoxin/fibulin)|interpro:IPR001134(Netrin, C-terminal)|interpro:IPR001599(Alpha-2-macroglobulin)|interpro:IPR002890(Alpha-2-macroglobulin, N-terminal)|interpro:IPR008930(Terpenoid cylases/protein prenyltransferase alpha-alpha toroid)|interpro:IPR008993(TIMP-like, OB-fold)|interpro:IPR009048(Alpha-macroglobulin, receptor-binding)|interpro:IPR011625(Alpha-2-macroglobulin, N-terminal 2)|interpro:IPR011626(A-macroglobulin complement component)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR018081|interpro:IPR018933|interpro:IPR036595|interpro:IPR037562|interpro:IPR040839|interpro:IPR041425|interpro:IPR041555|rcsb pdb:4P3A|rcsb pdb:4P3B|rcsb pdb:4WB2|rcsb pdb:4WB3|reactome:R-MMU-166665|reactome:R-MMU-174577|reactome:R-MMU-375276|reactome:R-MMU-418594|reactome:R-MMU-977606|refseq:NP_034536.2|entrezgene/locuslink:15139(identity) - - author-confidence:12.95636171 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:DJWB7iUX1s5YipRV64JIr8Mub7s10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q8CDG3 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-646144|uniprotkb:Q7TMU9|uniprotkb:Q8BP90 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:vcip1_mouse(display_long)|uniprotkb:Valosin-containing protein p97/p47 complex-interacting protein p135(gene name synonym)|uniprotkb:Valosin-containing protein p97/p47 complex-interacting protein 1(gene name synonym)|uniprotkb:Vcpip1(gene name)|psi-mi:Vcpip1(display_short)|uniprotkb:Vcip135(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) interpro:IPR029071|refseq:NP_775619.2|interpro:IPR003323(Ovarian tumour, otubain)|mint:Q8CDG3|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005795"(Golgi stack)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007030"(Golgi organization)|go:"GO:0016320"(endoplasmic reticulum membrane fusion)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0035871"(protein K11-linked deubiquitination)|go:"GO:0045202"(synapse)|go:"GO:0071108"(protein K48-linked deubiquitination)|go:"GO:0090168"(Golgi reassembly)|go:"GO:0106300"(protein-DNA covalent cross-linking repair)|go:"GO:1905634"(regulation of protein localization to chromatin)|reactome:R-MMU-5689896|interpro:IPR039087|entrezgene/locuslink:70675(identity) - - author-confidence:6.164553505 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:jTwHlp3wXtIw4o5+Oqvb47HbKEk10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:P04627 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-644485|uniprotkb:Q99J44|uniprotkb:Q9CTT5|uniprotkb:Q9D6R6|uniprotkb:Q9DBU7|uniprotkb:B1AUN9|ensembl:ENSMUSP00000001155 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:araf_mouse(display_long)|uniprotkb:Araf(gene name)|psi-mi:Araf(display_short)|uniprotkb:A-raf(gene name synonym)|uniprotkb:Araf1(gene name synonym)|uniprotkb:Proto-oncogene A-Raf(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001153117.1|refseq:NP_033833.1|ensembl:ENSMUSG00000001127(gene)|ensembl:ENSMUST00000001155(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004709"(MAP kinase kinase kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0032006"(regulation of TOR signaling)|go:"GO:0032434"(regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR001245(Tyrosine protein kinase)|interpro:IPR002219(Protein kinase C, phorbol ester/diacylglycerol binding)|interpro:IPR003116(Raf-like Ras-binding)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR020454|interpro:IPR029071|mint:P04627|reactome:R-MMU-5673000|reactome:R-MMU-5674135|reactome:R-MMU-5675221|refseq:XP_006527619.1|refseq:XP_006527620.1|dip:DIP-1070N|entrezgene/locuslink:11836(identity) - - author-confidence:11.4258888 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:/0GyghXkkvb5pkn538YAgEqPepI10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:Q64337 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-645025|uniprotkb:Q99JM8|ensembl:ENSMUSP00000099835 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:sqstm_mouse(display_long)|uniprotkb:Ubiquitin-binding protein p62(gene name synonym)|uniprotkb:STONE14(gene name synonym)|uniprotkb:Sqstm1(gene name)|psi-mi:Sqstm1(display_short)|uniprotkb:A170(gene name synonym)|uniprotkb:STAP(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_001277698.1|refseq:NP_035148.1|ensembl:ENSMUSG00000015837(gene)|ensembl:ENSMUST00000102774(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000423"(mitophagy)|go:"GO:0000932"(P-body)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0002376"(immune system process)|go:"GO:0002931"(response to ischemia)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005080"(protein kinase C binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005770"(late endosome)|go:"GO:0005776"(autophagosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0007032"(endosome organization)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016234"(inclusion body)|go:"GO:0016235"(aggresome)|go:"GO:0016236"(macroautophagy)|go:"GO:0016605"(PML body)|go:"GO:0019899"(enzyme binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030017"(sarcomere)|go:"GO:0030154"(cell differentiation)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0035973"(aggrephagy)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043122"(regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044753"(amphisome)|go:"GO:0044754"(autolysosome)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0061635"(regulation of protein complex stability)|go:"GO:0061912"(selective autophagy)|go:"GO:0070530"(K63-linked polyubiquitin modification-dependent protein binding)|go:"GO:0097225"(sperm midpiece)|go:"GO:0097413"(Lewy body)|go:"GO:0098780"(response to mitochondrial depolarisation)|go:"GO:1900273"(positive regulation of long-term synaptic potentiation)|go:"GO:1903078"(positive regulation of protein localization to plasma membrane)|go:"GO:1905719"(protein localization to perinuclear region of cytoplasm)|interpro:IPR000270(Octicosapeptide/Phox/Bem1p)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR033741|interpro:IPR034866|interpro:IPR043145|mint:Q64337|rcsb pdb:2RRU|rcsb pdb:2ZJD|rcsb pdb:3ADE|rcsb pdb:3B0F|rcsb pdb:3WDZ|reactome:R-MMU-205043|reactome:R-MMU-209543|reactome:R-MMU-209560|reactome:R-MMU-5205685|reactome:R-MMU-9020702|reactome:R-MMU-9664873|dip:DIP-38490N|entrezgene/locuslink:18412(identity) - - author-confidence:6.106540478 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:/BktZPkmiLsU1fKVqPSQ8ae2+SY10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8QZZ8 uniprotkb:P28028 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-2584830|uniprotkb:E9QNG9|uniprotkb:Q3USE9|uniprotkb:F6SZ47 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:braf_mouse(display_long)|uniprotkb:Braf(gene name)|psi-mi:Braf(display_short)|uniprotkb:B-raf(gene name synonym)|uniprotkb:Proto-oncogene B-Raf(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569528|imex:IM-24977-37 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_647455.3|go:"GO:0043367"(CD4-positive, alpha-beta T cell differentiation)|go:"GO:0043368"(positive T cell selection)|go:"GO:0043369"(CD4-positive or CD8-positive, alpha-beta T cell lineage commitment)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044297"(cell body)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045580"(regulation of T cell differentiation)|go:"GO:0046632"(alpha-beta T cell differentiation)|go:"GO:0048538"(thymus development)|go:"GO:0048679"(regulation of axon regeneration)|go:"GO:0048680"(positive regulation of axon regeneration)|go:"GO:0050772"(positive regulation of axonogenesis)|go:"GO:0050852"(T cell receptor signaling pathway)|go:"GO:0051496"(positive regulation of stress fiber assembly)|go:"GO:0051591"(response to cAMP)|go:"GO:0060291"(long-term synaptic potentiation)|go:"GO:0060323"(head morphogenesis)|go:"GO:0060324"(face development)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:2000301"(negative regulation of synaptic vesicle exocytosis)|go:"GO:2000352"(negative regulation of endothelial cell apoptotic process)|interpro:IPR000719(Protein kinase, core)|go:"GO:0070413"(trehalose metabolism in response to stress)|interpro:IPR001245(Tyrosine protein kinase)|go:"GO:0071277"(cellular response to calcium ion)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097110"(scaffold protein binding)|interpro:IPR002219(Protein kinase C, phorbol ester/diacylglycerol binding)|interpro:IPR003116(Raf-like Ras-binding)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR020454|interpro:IPR029071|go:"GO:1900026"(positive regulation of substrate adhesion-dependent cell spreading)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|go:"GO:0000165"(MAPK cascade)|go:"GO:0000186"(obsolete activation of MAPKK activity)|go:"GO:0002318"(myeloid progenitor cell differentiation)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004709"(MAP kinase kinase kinase activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007173"(epidermal growth factor receptor signaling pathway)|go:"GO:0008542"(visual learning)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010764"(negative regulation of fibroblast migration)|go:"GO:0010828"(positive regulation of glucose transmembrane transport)|go:"GO:0016020"(membrane)|go:"GO:0030154"(cell differentiation)|go:"GO:0030878"(thyroid gland development)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031434"(mitogen-activated protein kinase kinase binding)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0035019"(somatic stem cell population maintenance)|go:"GO:0035690"|go:"GO:0042127"(regulation of cell population proliferation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043005"(neuron projection)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043231"(intracellular membrane-bounded organelle)|reactome:R-MMU-1295596|reactome:R-MMU-5673000|reactome:R-MMU-5674135|reactome:R-MMU-5674499|reactome:R-MMU-5675221|dip:DIP-57050N|reactome:R-MMU-170968|entrezgene/locuslink:109880(identity) - - author-confidence:250.0629218 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2021/02/11 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:EblhyDWxW1SHryfZ0Jlabs2rCuw10090 intact-crc:44A5000B11497DC3|rigid:65tKuT82dhO/R9/EcglXJetVYpQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q03717 intact:EBI-2323063 intact:EBI-7511364|uniprotkb:Q8K0D1|intact:MINT-8298631|ensembl:ENSMUSP00000057981|ensembl:ENSMUSP00000147093 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:kcnb1_mouse(display_long)|uniprotkb:Kcnb1(gene name)|psi-mi:Kcnb1(display_short)|uniprotkb:mShab(gene name synonym)|uniprotkb:Voltage-gated potassium channel subunit Kv2.1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_032446.2|interpro:IPR004350(Potassium channel, voltage dependent, Kv2.1)|interpro:IPR005821(Ion transport)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR027359|interpro:IPR028325|reactome:R-MMU-1296072|reactome:R-MMU-381676|refseq:XP_017171221.1|refseq:XP_017171222.1|ensembl:ENSMUSG00000050556(gene)|ensembl:ENSMUST00000059826(transcript)|ensembl:ENSMUST00000207917(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0001508"(action potential)|go:"GO:0005249"(voltage-gated potassium channel activity)|go:"GO:0005251"(delayed rectifier potassium channel activity)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005886"(plasma membrane)|go:"GO:0006813"(potassium ion transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007215"(glutamate receptor signaling pathway)|go:"GO:0008076"(voltage-gated potassium channel complex)|go:"GO:0009986"(cell surface)|go:"GO:0010701"(positive regulation of norepinephrine secretion)|go:"GO:0015271"(outward rectifier potassium channel activity)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0031669"(cellular response to nutrient levels)|go:"GO:0032590"(dendrite membrane)|go:"GO:0032809"(neuronal cell body membrane)|go:"GO:0033605"(positive regulation of catecholamine secretion)|go:"GO:0034765"(regulation of ion transmembrane transport)|go:"GO:0042383"(sarcolemma)|go:"GO:0042593"(glucose homeostasis)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043204"(perikaryon)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0045956"(positive regulation of calcium ion-dependent exocytosis)|go:"GO:0046676"(negative regulation of insulin secretion)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0051260"(protein homooligomerization)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0071805"(potassium ion transmembrane transport)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090314"(positive regulation of protein targeting to membrane)|go:"GO:0097623"(potassium ion export across plasma membrane)|go:"GO:0098900"(regulation of action potential)|go:"GO:1900454"(positive regulation of long-term synaptic depression)|go:"GO:2000671"(regulation of motor neuron apoptotic process)|interpro:IPR000210(BTB/POZ-like)|interpro:IPR003131(Potassium channel, voltage dependent, Kv, tetramerisation)|interpro:IPR003968(Potassium channel, voltage dependent, Kv)|interpro:IPR003973(Potassium channel, voltage dependent, Kv2)|entrezgene/locuslink:16500(identity) - - comment:mint|author-confidence:18.931881996147933 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:bVGBUW1uvAWqGoo7whe/Oa6Wcv010090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q8VHQ4 intact:EBI-2323063 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) - - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins"|author-confidence:109.13589149957427 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q3UHH1 intact:EBI-2323063 intact:EBI-8419341|uniprotkb:Q8CE12|uniprotkb:Q8CHC3|intact:MINT-4115901|uniprotkb:Q9D789|uniprotkb:Q80Y41|uniprotkb:Q5U4B9|uniprotkb:Q6PCY6|uniprotkb:B2RX90|ensembl:ENSMUSP00000022358 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:zswm8_mouse(display_long)|uniprotkb:Zswim8(gene name)|psi-mi:Zswim8(display_short)|uniprotkb:Kiaa0913(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_001239010.1|refseq:NP_001239011.1|refseq:NP_082272.1|ensembl:ENSMUSG00000021819(gene)|ensembl:ENSMUST00000022358(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031462"(Cul2-RING ubiquitin ligase complex)|go:"GO:0031463"(Cul3-RING ubiquitin ligase complex)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:1902667"(regulation of axon guidance)|go:"GO:1990756"(ubiquitin ligase-substrate adaptor activity)|go:"GO:2000627"(positive regulation of miRNA catabolic process)|interpro:IPR007527(Zinc finger, SWIM-type)|mint:Q3UHH1|entrezgene/locuslink:268721(identity) - - comment:mint|author-confidence:38.570451912555626 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:C5V4tZMPbr+6VWuzv3N9p7BzPfw10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:P06797 intact:EBI-2323063 intact:EBI-7876993|uniprotkb:Q91UZ0|intact:MINT-1863740|ensembl:ENSMUSP00000021933|ensembl:ENSMUSP00000152169 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:catl1_mouse(display_long)|uniprotkb:Ctsl(gene name)|psi-mi:Ctsl(display_short)|uniprotkb:Ctsl1(gene name synonym)|uniprotkb:Major excreted protein(gene name synonym)|uniprotkb:p39 cysteine proteinase(gene name synonym)|uniprotkb:Cathepsin L1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_034114.1|refseq:XP_006517143.1|go:"GO:0043373"(CD4-positive, alpha-beta T cell lineage commitment)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0046697"(decidualization)|go:"GO:0048002"(antigen processing and presentation of peptide antigen)|go:"GO:0048102"(autophagic cell death)|go:"GO:0051384"(response to glucocorticoid)|go:"GO:0051603"(proteolysis involved in cellular protein catabolic process)|go:"GO:0060008"(Sertoli cell differentiation)|go:"GO:0060309"(elastin catabolic process)|go:"GO:0062023"(collagen-containing extracellular matrix)|interpro:IPR000169(Peptidase, cysteine peptidase active site)|interpro:IPR000668(Peptidase C1A, papain C-terminal)|interpro:IPR013201(Proteinase inhibitor I29, cathepsin propeptide)|go:"GO:0043204"(perikaryon)|interpro:IPR025660|interpro:IPR025661|interpro:IPR038765|interpro:IPR039417|rcsb pdb:1MVV|reactome:R-MMU-1442490|reactome:R-MMU-1474228|reactome:R-MMU-1679131|reactome:R-MMU-2022090|reactome:R-MMU-2132295|reactome:R-MMU-8939242|ensembl:ENSMUSG00000021477(gene)|ensembl:ENSMUST00000021933(transcript)|ensembl:ENSMUST00000222517(transcript)|go:"GO:0004175"(endopeptidase activity)|go:"GO:0004177"(aminopeptidase activity)|go:"GO:0004197"(cysteine-type endopeptidase activity)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005773"(vacuole)|go:"GO:0005902"(microvillus)|go:"GO:0006508"(proteolysis)|go:"GO:0006590"(thyroid hormone generation)|go:"GO:0006955"(immune response)|go:"GO:0007154"(cell communication)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008584"(male gonad development)|go:"GO:0009749"(response to glucose)|go:"GO:0009897"(external side of plasma membrane)|go:"GO:0010259"(multicellular organism aging)|go:"GO:0010839"(negative regulation of keratinocyte proliferation)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0016807"(cysteine-type carboxypeptidase activity)|go:"GO:0021675"(nerve development)|go:"GO:0030574"(collagen catabolic process)|go:"GO:0030984"(kininogen binding)|go:"GO:0031069"(hair follicle morphogenesis)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031638"(zymogen activation)|go:"GO:0034230"(enkephalin processing)|go:"GO:0034698"(response to gonadotropin)|go:"GO:0042277"(peptide binding)|go:"GO:0042393"(histone binding)|go:"GO:0042583"(chromaffin granule)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0043005"(neuron projection)|entrezgene/locuslink:13039(identity) - - comment:mint|function:Important for the overall degradation of proteins in lysosomes|author-confidence:7.462974301121525 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:oFAYLk0ZhXto2nbmx/lUdQc2EJM10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q5BL07 intact:EBI-2323063 intact:EBI-11566800|uniprotkb:Q9CU85|uniprotkb:Q3UEC7|ensembl:ENSMUSP00000113304 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:pex1_mouse(display_long)|uniprotkb:Peroxin-1(gene name synonym)|uniprotkb:Pex1(gene name)|psi-mi:Pex1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_001280735.1|refseq:NP_082053.1|ensembl:ENSMUSG00000005907(gene)|ensembl:ENSMUST00000121291(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005777"(peroxisome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006625"(protein targeting to peroxisome)|go:"GO:0007031"(peroxisome organization)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008289"(lipid binding)|go:"GO:0016558"(protein import into peroxisome matrix)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0060152"(microtubule-based peroxisome localization)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR015342(Peroxisome biogenesis factor 1, N-terminal)|interpro:IPR015343(Peroxisome biogenesis factor 1, alpha/beta)|interpro:IPR025653|interpro:IPR027417|interpro:IPR029067|interpro:IPR041569|rcsb pdb:1WLF|reactome:R-MMU-9033241|entrezgene/locuslink:71382(identity) - - author-confidence:9.89862892904382 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:D8vvEOknIg7wJfkwC8JS7gLBiDA10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q9CZX9 intact:EBI-2323063 intact:EBI-11516104|uniprotkb:A2AGJ7|uniprotkb:Q9D1D9|ensembl:ENSMUSP00000028551 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:emc4_mouse(display_long)|uniprotkb:Emc4(gene name)|psi-mi:Emc4(display_short)|uniprotkb:Tmem85(gene name synonym)|uniprotkb:Transmembrane protein 85(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_080795.1|ensembl:ENSMUSG00000027131(gene)|ensembl:ENSMUST00000028551(transcript)|go:"GO:0006915"(apoptotic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0032977"(membrane insertase activity)|go:"GO:0045050"(protein insertion into ER membrane by stop-transfer membrane-anchor sequence)|go:"GO:0071816"(tail-anchored membrane protein insertion into ER membrane)|go:"GO:0072546"(EMC complex)|interpro:IPR009445(Protein of unknown function DUF1077)|entrezgene/locuslink:68032(identity) - - author-confidence:4.622477995212586 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:P6XioYpYtpB5/WITC1ZIGHJEJCE10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:P62869 intact:EBI-2323063 intact:EBI-2659323|uniprotkb:Q80W20|uniprotkb:Q63529|ensembl:ENSMUSP00000066210 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:elob_mouse(display_long)|uniprotkb:Elob(gene name)|psi-mi:Elob(display_short)|uniprotkb:Elongin 18 kDa subunit(gene name synonym)|uniprotkb:RNA polymerase II transcription factor SIII subunit B(gene name synonym)|uniprotkb:SIII p18(gene name synonym)|uniprotkb:Tceb2(gene name synonym)|uniprotkb:Transcription elongation factor B polypeptide 2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_080581.1|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031462"(Cul2-RING ubiquitin ligase complex)|go:"GO:0031466"(Cul5-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070449"(elongin complex)|interpro:IPR000626(Ubiquitin)|interpro:IPR029071|go:"GO:0030891"(VCB complex)|interpro:IPR039049|mint:P62869|rcsb pdb:2FNJ|rcsb pdb:4JGH|reactome:R-MMU-112382|reactome:R-MMU-1234176|reactome:R-MMU-674695|reactome:R-MMU-6796648|reactome:R-MMU-75955|reactome:R-MMU-8951664|reactome:R-MMU-9705462|reactome:R-MMU-983168|ensembl:ENSMUSG00000055839(gene)|ensembl:ENSMUST00000069579(transcript)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|entrezgene/locuslink:67673(identity) - - author-confidence:146.47093368843255 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:7W4I9AcvS1GK89dMmBOImMYNgLY10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q3UG70 intact:EBI-2323063 intact:EBI-11569744 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:q3ug70_mouse(display_long)|uniprotkb:Polg(gene name)|psi-mi:Polg(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) interpro:IPR001098(DNA-directed DNA polymerase, family A)|interpro:IPR002297(DNA-directed DNA-polymerase, family A, mitochondria)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR019760|refseq:NP_059490.2|interpro:IPR041336|go:"GO:0003677"(DNA binding)|go:"GO:0003887"(DNA-directed DNA polymerase activity)|go:"GO:0005760"(gamma DNA polymerase complex)|go:"GO:0006260"(DNA replication)|go:"GO:0042645"(mitochondrial nucleoid)|interpro:IPR043502|entrezgene/locuslink:18975(identity) - - author-confidence:51.17695044259477 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:VS+mx9xRypdm5KEiilWBZtfIBBM10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q8K0L0 intact:EBI-2323063 intact:EBI-11569754|uniprotkb:Q9WV73|uniprotkb:Q9CTH4|ensembl:ENSMUSP00000021617 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:asb2_mouse(display_long)|uniprotkb:Asb2(gene name)|psi-mi:Asb2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_075536.1|ensembl:ENSMUSG00000021200(gene)|ensembl:ENSMUST00000021617(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0001947"(heart looping)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0014732"(skeletal muscle atrophy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030018"(Z disc)|go:"GO:0031532"(actin cytoskeleton reorganization)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035914"(skeletal muscle cell differentiation)|go:"GO:0036336"(dendritic cell migration)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0055007"(cardiac muscle cell differentiation)|go:"GO:0055013"(cardiac muscle cell development)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0071800"(podosome assembly)|go:"GO:0097602"(cullin family protein binding)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR002110(Ankyrin)|interpro:IPR003903(Ubiquitin interacting motif)|interpro:IPR020683|interpro:IPR036036|interpro:IPR036770|reactome:R-MMU-8951664|reactome:R-MMU-983168|entrezgene/locuslink:65256(identity) - - author-confidence:13.928124537011417 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:2jy+3ri0iyWWKSUGTur/qC7TFu810090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q5SSH7 intact:EBI-2323063 intact:EBI-11566812|uniprotkb:Q8C710|uniprotkb:Q8CI54|uniprotkb:Q499C8|uniprotkb:Q6ZQC5 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:zzef1_mouse(display_long)|uniprotkb:Kiaa0399(gene name synonym)|uniprotkb:Zzef1(gene name)|psi-mi:Zzef1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) interpro:IPR040099|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR004939(Anaphase-promoting complex, subunit 10)|interpro:IPR008979(Galactose-binding like)|interpro:IPR011992(EF-Hand type)|refseq:NP_001039001.1|interpro:IPR041986|go:"GO:0005509"(calcium ion binding)|go:"GO:0008270"(zinc ion binding)|interpro:IPR043145|entrezgene/locuslink:195018(identity) - - author-confidence:25.815975538137764 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:YUjKPpOzsZy2UKAL6rwkhu6TYNA10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:P97819 intact:EBI-2323063 intact:EBI-11566856|uniprotkb:Q99LA9|uniprotkb:Q9JK61|ensembl:ENSMUSP00000134672 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:plpl9_mouse(display_long)|uniprotkb:2-lysophosphatidylcholine acylhydrolase(gene name synonym)|uniprotkb:Palmitoyl-CoA hydrolase(gene name synonym)|uniprotkb:Group VI phospholipase A2(gene name synonym)|uniprotkb:Intracellular membrane-associated calcium-independent phospholipase A2 beta(gene name synonym)|uniprotkb:Patatin-like phospholipase domain-containing protein 9(gene name synonym)|uniprotkb:Pnpla9(gene name synonym)|uniprotkb:Pla2g6(gene name)|psi-mi:Pla2g6(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_001185952.1|refseq:NP_001185953.1|refseq:NP_001185954.1|refseq:NP_058611.1|refseq:XP_006521215.1|refseq:XP_006521216.1|refseq:XP_006521217.1|refseq:XP_006521218.1|refseq:XP_006521219.1|refseq:XP_006521220.1|refseq:XP_006521221.1|refseq:XP_006521222.1|refseq:XP_006521223.1|ensembl:ENSMUSG00000042632(gene)|ensembl:ENSMUST00000174021(transcript)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0003847"(1-alkyl-2-acetylglycerophosphocholine esterase activity)|go:"GO:0004622"(lysophospholipase activity)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005615"(extracellular space)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006935"(chemotaxis)|go:"GO:0007204"(positive regulation of cytosolic calcium ion concentration)|go:"GO:0007613"(memory)|go:"GO:0014832"(urinary bladder smooth muscle contraction)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016290"(palmitoyl-CoA hydrolase activity)|go:"GO:0017171"(serine hydrolase activity)|go:"GO:0019731"(antibacterial humoral response)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031143"(pseudopodium)|go:"GO:0032049"(cardiolipin biosynthetic process)|go:"GO:0034451"(centriolar satellite)|go:"GO:0034638"(phosphatidylcholine catabolic process)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035774"(positive regulation of insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0035965"(cardiolipin acyl-chain remodeling)|go:"GO:0042311"(vasodilation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043008"(ATP-dependent protein binding)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0046338"(phosphatidylethanolamine catabolic process)|go:"GO:0046469"(platelet activating factor metabolic process)|go:"GO:0046473"(phosphatidic acid metabolic process)|go:"GO:0047499"(calcium-independent phospholipase A2 activity)|go:"GO:0051967"(negative regulation of synaptic transmission, glutamatergic)|go:"GO:0060135"(maternal process involved in female pregnancy)|go:"GO:0090037"(positive regulation of protein kinase C signaling)|go:"GO:0090200"(positive regulation of release of cytochrome c from mitochondria)|go:"GO:0090238"(positive regulation of arachidonic acid secretion)|go:"GO:0102545"(phosphatidyl phospholipase B activity)|go:"GO:0102567"|go:"GO:0102568"|go:"GO:0102991"(myristoyl-CoA hydrolase activity)|go:"GO:1901339"(regulation of store-operated calcium channel activity)|go:"GO:2000304"(positive regulation of ceramide biosynthetic process)|interpro:IPR002110(Ankyrin)|interpro:IPR002641(Patatin)|interpro:IPR016035(Acyl transferase/acyl hydrolase/lysophospholipase)|interpro:IPR020683|interpro:IPR036770|reactome:R-MMU-1482788|reactome:R-MMU-1482839|reactome:R-MMU-2029485|reactome:R-MMU-6811436|refseq:XP_017172187.1|entrezgene/locuslink:53357(identity) - - author-confidence:2.3590774322184718 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:0KpCuPTxpld1rBYdVZPIjUKLPEQ10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:P83940 intact:EBI-2323063 intact:EBI-2323027|uniprotkb:Q63182|ensembl:ENSMUSP00000111009|ensembl:ENSMUSP00000139675|ensembl:ENSMUSP00000140422|ensembl:ENSMUSP00000140962 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:eloc_mouse(display_long)|uniprotkb:Eloc(gene name)|psi-mi:Eloc(display_short)|uniprotkb:Elongin 15 kDa subunit(gene name synonym)|uniprotkb:RNA polymerase II transcription factor SIII subunit C(gene name synonym)|uniprotkb:SIII p15(gene name synonym)|uniprotkb:Stromal membrane-associated protein SMAP1B homolog(gene name synonym)|uniprotkb:Tceb1(gene name synonym)|uniprotkb:Transcription elongation factor B polypeptide 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_080732.1|refseq:NP_001297399.1|refseq:XP_006495624.1|refseq:XP_006495625.1|refseq:XP_006495626.1|refseq:XP_006495627.1|dip:DIP-42814N|ensembl:ENSMUSG00000079658(gene)|ensembl:ENSMUST00000115352(transcript)|ensembl:ENSMUST00000185771(transcript)|ensembl:ENSMUST00000186948(transcript)|ensembl:ENSMUST00000188641(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0030891"(VCB complex)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0070449"(elongin complex)|interpro:IPR001232(SKP1 component)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR016073(SKP1 component, POZ)|interpro:IPR039948|mint:P83940|rcsb pdb:2FNJ|rcsb pdb:2JZ3|rcsb pdb:4JGH|reactome:R-MMU-112382|reactome:R-MMU-1234176|reactome:R-MMU-674695|reactome:R-MMU-6796648|reactome:R-MMU-75955|reactome:R-MMU-8951664|reactome:R-MMU-9705462|reactome:R-MMU-983168|entrezgene/locuslink:67923(identity) - - author-confidence:19.318338007100795 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:Ngvkh3YoddZoutF3Vgwdi2b6xz410090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:P23927 intact:EBI-2323063 intact:EBI-299046|ensembl:ENSMUSP00000034562|ensembl:ENSMUSP00000149759|ensembl:ENSMUSP00000149803|ensembl:ENSMUSP00000150669|uniprotkb:Q64325 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:cryab_mouse(display_long)|uniprotkb:Cryab(gene name)|psi-mi:Cryab(display_short)|uniprotkb:Crya2(gene name synonym)|uniprotkb:"Alpha(B)-crystallin"(gene name synonym)|uniprotkb:P23(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) ensembl:ENSMUSG00000032060(gene)|ensembl:ENSMUST00000034562(transcript)|ensembl:ENSMUST00000214962(transcript)|ensembl:ENSMUST00000216755(transcript)|ensembl:ENSMUST00000217475(transcript)|go:"GO:0001540"(amyloid-beta binding)|go:"GO:0001666"(response to hypoxia)|go:"GO:0002088"(lens development in camera-type eye)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005212"(structural constituent of eye lens)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0007021"(tubulin complex assembly)|go:"GO:0007517"(muscle organ development)|go:"GO:0008017"(microtubule binding)|go:"GO:0008092"(cytoskeletal protein binding)|go:"GO:0009986"(cell surface)|go:"GO:0010259"(multicellular organism aging)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010941"(regulation of cell death)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0030018"(Z disc)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0030424"(axon)|go:"GO:0031109"(microtubule polymerization or depolymerization)|go:"GO:0031333"(negative regulation of protein-containing complex assembly)|go:"GO:0031430"(M band)|go:"GO:0031674"(I band)|go:"GO:0032355"(response to estradiol)|go:"GO:0032387"(negative regulation of intracellular transport)|go:"GO:0032432"(actin filament bundle)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043010"(camera-type eye development)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043154"(negative regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0043197"(dendritic spine)|go:"GO:0043204"(perikaryon)|go:"GO:0043209"(myelin sheath)|go:"GO:0043292"(contractile fiber)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045202"(synapse)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051403"(stress-activated MAPK cascade)|go:"GO:0060561"(apoptotic process involved in morphogenesis)|go:"GO:0071480"(cellular response to gamma radiation)|go:"GO:0097060"(synaptic membrane)|go:"GO:0097512"(cardiac myofibril)|go:"GO:1905907"(negative regulation of amyloid fibril formation)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|interpro:IPR001436(Alpha crystallin/Heat shock protein)|interpro:IPR002068(Heat shock protein Hsp20)|interpro:IPR003090(Alpha-crystallin, N-terminal)|interpro:IPR008978(HSP20-like chaperone)|interpro:IPR037882|mint:P23927|reactome:R-MMU-3371571|refseq:XP_006510033.1|refseq:NP_034094.1|refseq:NP_001276711.1|refseq:NP_001276713.1|refseq:NP_001276714.1|dip:DIP-31060N|entrezgene/locuslink:12955(identity) - - author-confidence:40.993432925338126 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:LOp5smbeRceV8/P+Eaoh7p+24Vw10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:P05214 intact:EBI-2323063 intact:EBI-10963854|ensembl:ENSMUSP00000084713|ensembl:ENSMUSP00000085580 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:tba3_mouse(display_long)|uniprotkb:Tuba3a(gene name)|psi-mi:Tuba3a(display_short)|uniprotkb:Tuba3b(gene name)|psi-mi:Tuba3b(display_short)|uniprotkb:Alpha-tubulin 3/7(gene name synonym)|uniprotkb:Alpha-tubulin isotype M-alpha-3/7(gene name synonym)|uniprotkb:Tuba3(gene name synonym)|uniprotkb:Tuba7(gene name synonym)|uniprotkb:Tubulin alpha-3/alpha-7 chain(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_033472.1|refseq:NP_033475.1|interpro:IPR023123|interpro:IPR036525|interpro:IPR037103|reactome:R-MMU-190840|reactome:R-MMU-2132295|reactome:R-MMU-2467813|reactome:R-MMU-2500257|reactome:R-MMU-3371497|reactome:R-MMU-380320|reactome:R-MMU-437239|reactome:R-MMU-5610787|reactome:R-MMU-5617833|reactome:R-MMU-5620924|reactome:R-MMU-5626467|reactome:R-MMU-5663220|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-6811436|reactome:R-MMU-68877|reactome:R-MMU-8852276|reactome:R-MMU-8955332|reactome:R-MMU-9646399|reactome:R-MMU-9648025|reactome:R-MMU-9668328|reactome:R-MMU-983189|ensembl:ENSMUSG00000067338(gene)|ensembl:ENSMUSG00000067702(gene)|ensembl:ENSMUST00000087445(transcript)|ensembl:ENSMUST00000088246(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005874"(microtubule)|go:"GO:0005929"(cilium)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0036064"(ciliary basal body)|interpro:IPR000217(Tubulin)|interpro:IPR002452(Alpha tubulin)|interpro:IPR003008(Tubulin/FtsZ, GTPase)|interpro:IPR008280(Tubulin/FtsZ, C-terminal)|interpro:IPR017975|interpro:IPR018316|entrezgene/locuslink:22144(identity) - - author-confidence:2.3215920916641526 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:mE1Hcdc9AAMMxfxzKB6TfM6RrHE10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:P42867 intact:EBI-2323063 intact:EBI-11569749|uniprotkb:Q921W5|ensembl:ENSMUSP00000056282 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:gpt_mouse(display_long)|uniprotkb:Dpagt2(gene name synonym)|uniprotkb:GlcNAc-1-P transferase(gene name synonym)|uniprotkb:Gnpta(gene name synonym)|uniprotkb:N-acetylglucosamine-1-phosphate transferase(gene name synonym)|uniprotkb:Dpagt1(gene name)|psi-mi:Dpagt1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_031901.2|ensembl:ENSMUSG00000032123(gene)|ensembl:ENSMUST00000054708(transcript)|go:"GO:0003975"(UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity)|go:"GO:0003976"(UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006047"(UDP-N-acetylglucosamine metabolic process)|go:"GO:0006487"(protein N-linked glycosylation)|go:"GO:0006488"(dolichol-linked oligosaccharide biosynthetic process)|go:"GO:0006489"(dolichyl diphosphate biosynthetic process)|go:"GO:0008963"(phospho-N-acetylmuramoyl-pentapeptide-transferase activity)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016757"(glycosyltransferase activity)|go:"GO:0019348"(dolichol metabolic process)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046872"(metal ion binding)|interpro:IPR000715(Glycosyl transferase, family 4)|interpro:IPR033895|rcsb pdb:6JQ2|reactome:R-MMU-446193|entrezgene/locuslink:13478(identity) - - author-confidence:11.59332332534241 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:D2sKaw7kHABYstQe6DodrFhgJTo10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q99NH0 intact:EBI-2323063 intact:EBI-647840|uniprotkb:Q3TV99|uniprotkb:Q5F4T7|uniprotkb:Q6PG69|uniprotkb:Q6ZQ66|uniprotkb:Q8CHT4|ensembl:ENSMUSP00000014421 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:anr17_mouse(display_long)|uniprotkb:Foe(gene name synonym)|uniprotkb:Kiaa0697(gene name synonym)|uniprotkb:Gene trap ankyrin repeat protein(gene name synonym)|uniprotkb:Ankyrin repeat domain-containing protein FOE(gene name synonym)|uniprotkb:Ankrd17(gene name)|psi-mi:Ankrd17(display_short)|uniprotkb:Gtar(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_112148.2|ensembl:ENSMUSG00000055204(gene)|ensembl:ENSMUST00000014421(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0001955"(blood vessel maturation)|go:"GO:0003682"(chromatin binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006275"(regulation of DNA replication)|go:"GO:0007492"(endoderm development)|go:"GO:0031965"(nuclear membrane)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045787"(positive regulation of cell cycle)|go:"GO:0051151"(negative regulation of smooth muscle cell differentiation)|go:"GO:1900087"(positive regulation of G1/S transition of mitotic cell cycle)|go:"GO:1900245"(positive regulation of MDA-5 signaling pathway)|go:"GO:1900246"(positive regulation of RIG-I signaling pathway)|interpro:IPR002110(Ankyrin)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR020683|interpro:IPR036612|interpro:IPR036770|mint:Q99NH0|entrezgene/locuslink:81702(identity) - - author-confidence:10.415748127071733 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:c/59Xwrg6uFRRx34dzmzkER9Lik10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:P27546 intact:EBI-2323063 intact:EBI-2526714|uniprotkb:Q05BJ2|uniprotkb:Q3UIS2|uniprotkb:Q3UUH5|uniprotkb:Q3UY36|uniprotkb:Q7TPC6|uniprotkb:Q7TPD4|uniprotkb:Q80YQ5|uniprotkb:Q8CFP5|ensembl:ENSMUSP00000035055 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:map4_mouse(display_long)|uniprotkb:Map4(gene name)|psi-mi:Map4(display_short)|uniprotkb:Mtap4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_001192259.1|refseq:NP_001192261.1|refseq:NP_032659.2|ensembl:ENSMUSG00000032479(gene)|ensembl:ENSMUST00000035055(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0005829"(cytosol)|go:"GO:0005874"(microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0005930"(axoneme)|go:"GO:0007052"(mitotic spindle organization)|go:"GO:0008017"(microtubule binding)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0030424"(axon)|go:"GO:0031175"(neuron projection development)|go:"GO:0051012"(microtubule sliding)|go:"GO:0051294"(establishment of spindle orientation)|go:"GO:0051301"(cell division)|go:"GO:0072686"(mitotic spindle)|go:"GO:1902856"(negative regulation of non-motile cilium assembly)|interpro:IPR001084(Tubulin-binding Tau protein)|interpro:IPR027323|mint:P27546|go:"GO:0043005"(neuron projection)|refseq:NP_001298092.1|refseq:NP_001298093.1|refseq:XP_017168653.1|entrezgene/locuslink:17758(identity) - - author-confidence:8.828333205407171 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:DVblnhNfUaxX6rpvxn660Pq09L410090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q8BGQ7 intact:EBI-2323063 intact:EBI-11566807|uniprotkb:Q8BXR0|ensembl:ENSMUSP00000034441 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:syac_mouse(display_long)|uniprotkb:Aars1(gene name)|psi-mi:Aars1(display_short)|uniprotkb:Aars(gene name synonym)|uniprotkb:Alanyl-tRNA synthetase(gene name synonym)|uniprotkb:Protein sticky(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_666329.2|refseq:XP_006530984.1|refseq:XP_006530985.1|refseq:XP_006530987.1|ensembl:ENSMUSG00000031960(gene)|ensembl:ENSMUST00000034441(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0002161"(aminoacyl-tRNA editing activity)|go:"GO:0002196"("Ser-tRNA(Ala) hydrolase activity")|go:"GO:0004813"(alanine-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006400"(tRNA modification)|go:"GO:0006419"(alanyl-tRNA aminoacylation)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016597"(amino acid binding)|go:"GO:0021680"(cerebellar Purkinje cell layer development)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0045182"(translation regulator activity)|go:"GO:0050885"(neuromuscular process controlling balance)|go:"GO:0050905"(neuromuscular process)|go:"GO:0140018"(regulation of cytoplasmic translational fidelity)|interpro:IPR002318(Alanyl-tRNA synthetase, class IIc)|interpro:IPR003156(Phosphoesterase, DHHA1)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR012947(Threonyl/alanyl tRNA synthetase, SAD)|interpro:IPR018162|interpro:IPR018163|interpro:IPR018164|interpro:IPR018165|interpro:IPR023033|refseq:XP_017168237.1|entrezgene/locuslink:234734(identity) - - author-confidence:23.695376272493434 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:AAJaTdSOMiW18YTZiS1MbVDYX5Y10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q8BUZ3 intact:EBI-2323063 intact:EBI-9672746|ensembl:ENSMUSP00000052320 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:tigd4_mouse(display_long)|uniprotkb:Tigd4(gene name)|psi-mi:Tigd4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_997161.1|ensembl:ENSMUSG00000047819(gene)|ensembl:ENSMUST00000062623(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|interpro:IPR004875(CENP-B protein)|interpro:IPR006600(Centromere protein B, helix-turn-helix)|interpro:IPR007889(Helix-turn-helix, Psq)|interpro:IPR009057(Homeodomain-like)|entrezgene/locuslink:403175(identity) - - author-confidence:13.19002033133471 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:aJTTdBfPg6CM6pX8/jJtBx+SXsA10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q6R5P0 intact:EBI-2323063 intact:EBI-6548549|ensembl:ENSMUSP00000068906 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:tlr11_mouse(display_long)|uniprotkb:Tlr11(gene name)|psi-mi:Tlr11(display_short)|uniprotkb:Gm287(gene name synonym)|uniprotkb:Tlr12(gene name synonym)|uniprotkb:Toll-like receptor 12(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) ensembl:ENSMUSG00000051969(gene)|ensembl:ENSMUST00000063570(transcript)|go:"GO:0002224"(toll-like receptor signaling pathway)|go:"GO:0004888"(transmembrane signaling receptor activity)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006954"(inflammatory response)|go:"GO:0009617"(response to bacterium)|go:"GO:0038023"(signaling receptor activity)|go:"GO:0045087"(innate immune response)|go:"GO:0050135"("NAD(P)+ nucleosidase activity")|go:"GO:0061809"(NAD+ nucleotidase, cyclic ADP-ribose generating)|interpro:IPR000157(Toll-Interleukin receptor)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR003591(Leucine-rich repeat, typical subtype)|interpro:IPR017241(Toll-like receptor)|interpro:IPR032675|interpro:IPR035897|refseq:NP_991388.2|entrezgene/locuslink:239081(identity) - - author-confidence:1.163473570157385 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:DDXI3/LUZ0edDMJ6CPL9mJrc5sE10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q6SJQ7 intact:EBI-2323063 intact:EBI-11569736|uniprotkb:A2A6Z3|uniprotkb:A2A6Z1|uniprotkb:Q6PEU7|uniprotkb:Q8K4V9|ensembl:ENSMUSP00000102171 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:clm1_mouse(display_long)|uniprotkb:CD300 antigen-like family member F(gene name synonym)|uniprotkb:Clm1(gene name synonym)|uniprotkb:Leukocyte mono-Ig-like receptor 3(gene name synonym)|uniprotkb:Lmir3(gene name synonym)|uniprotkb:Myeloid-associated immunoglobulin-like receptor 5(gene name synonym)|uniprotkb:Cd300lf(gene name)|psi-mi:Cd300lf(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:XP_017170042.1|refseq:NP_001162624.1|refseq:NP_663609.2|ensembl:ENSMUSG00000047798(gene)|ensembl:ENSMUST00000106561(transcript)|go:"GO:0001618"(virus receptor activity)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0004888"(transmembrane signaling receptor activity)|go:"GO:0005136"(interleukin-4 receptor binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030316"(osteoclast differentiation)|go:"GO:0033004"(negative regulation of mast cell activation)|go:"GO:0034125"(negative regulation of MyD88-dependent toll-like receptor signaling pathway)|go:"GO:0035666"(TRIF-dependent toll-like receptor signaling pathway)|go:"GO:0035772"(interleukin-13-mediated signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0097001"(ceramide binding)|go:"GO:1902216"(positive regulation of interleukin-4-mediated signaling pathway)|go:"GO:2000426"(negative regulation of apoptotic cell clearance)|go:"GO:2000427"(positive regulation of apoptotic cell clearance)|interpro:IPR003599(Immunoglobulin subtype)|interpro:IPR013106(Immunoglobulin V-set)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR036179|rcsb pdb:1ZOX|rcsb pdb:5FFL|rcsb pdb:5OR7|rcsb pdb:6C6Q|rcsb pdb:6C74|rcsb pdb:6E47|rcsb pdb:6E48|rcsb pdb:6H6L|rcsb pdb:6H6M|entrezgene/locuslink:246746(identity) - - author-confidence:1.453003200534077 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:3IVfb7xyGy9CH/kKfsUKvikO5SY10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:F8VPR5 intact:EBI-2323063 intact:EBI-10989694|ensembl:ENSMUSP00000023165 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:f8vpr5_mouse(display_long)|uniprotkb:Crebbp(gene name)|psi-mi:Crebbp(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_001020603.1|ensembl:ENSMUSG00000022521(gene)|ensembl:ENSMUST00000023165(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000123"(histone acetyltransferase complex)|go:"GO:0000785"(chromatin)|go:"GO:0001223"(transcription coactivator binding)|go:"GO:0002039"(p53 binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004402"(histone acetyltransferase activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016604"(nuclear body)|go:"GO:0018076"(N-terminal peptidyl-lysine acetylation)|go:"GO:0030511"(positive regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0031648"(protein destabilization)|go:"GO:0034644"(cellular response to UV)|go:"GO:0043426"(MRF binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048511"(rhythmic process)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1990258"(histone glutamine methylation)|interpro:IPR000197(Zinc finger, TAZ-type)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001487(Bromodomain)|interpro:IPR003101(Coactivator CBP, KIX)|interpro:IPR009110(Nuclear receptor coactivator, interlocking)|interpro:IPR010303(Protein of unknown function DUF902, CREBbp)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013178(H3K56 histone acetylation protein, RTT109)|interpro:IPR014744(Nuclear receptor coactivator, CREB-bp-like, interlocking)|interpro:IPR018359|interpro:IPR031162|interpro:IPR035898|interpro:IPR036427|interpro:IPR036529|interpro:IPR037073|interpro:IPR038547|interpro:IPR043145|go:"GO:0005737"(cytoplasm)|entrezgene/locuslink:12914(identity) - - author-confidence:2.94491975459597 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:9K1igrA8QbILB/vG1/XLKh9kzJM10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q6ZQ38 intact:EBI-2323063 intact:EBI-597255|uniprotkb:Q6PFR0|uniprotkb:Q9CV45|ensembl:ENSMUSP00000020315 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:cand1_mouse(display_long)|uniprotkb:Cullin-associated and neddylation-dissociated protein 1(gene name synonym)|uniprotkb:p120 CAND1(gene name synonym)|uniprotkb:Cand1(gene name)|psi-mi:Cand1(display_short)|uniprotkb:D10Ertd516e(gene name synonym)|uniprotkb:Kiaa0829(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_082270.1|ensembl:ENSMUSG00000020114(gene)|ensembl:ENSMUST00000020315(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0010265"(SCF complex assembly)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0017025"(TBP-class protein binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0043086"(negative regulation of catalytic activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)|interpro:IPR013932("TATA-binding protein interacting (TIP20)")|interpro:IPR016024(Armadillo-type fold)|interpro:IPR039852|mint:Q6ZQ38|reactome:R-MMU-6798695|reactome:R-MMU-8951664|reactome:R-MMU-917937|entrezgene/locuslink:71902(identity) - - author-confidence:3.085757534107197 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:E6bJujLfT/V3C8Iyk0hUD1m4gT010090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q7TME2 intact:EBI-2323063 intact:EBI-2551232|ensembl:ENSMUSP00000045286|uniprotkb:Q8CH61|uniprotkb:B1AQC8 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:spag5_mouse(display_long)|uniprotkb:Mastrin(gene name synonym)|uniprotkb:Mitotic spindle-associated protein p126(gene name synonym)|uniprotkb:Spag5(gene name)|psi-mi:Spag5(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) go:"GO:0036064"(ciliary basal body)|go:"GO:0051294"(establishment of spindle orientation)|go:"GO:0051301"(cell division)|go:"GO:0051988"(regulation of attachment of spindle microtubules to kinetochore)|go:"GO:0071539"(protein localization to centrosome)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090235"(regulation of metaphase plate congression)|go:"GO:0097431"(mitotic spindle pole)|go:"GO:1905832"(positive regulation of spindle assembly)|interpro:IPR028728|ensembl:ENSMUSG00000002055(gene)|ensembl:ENSMUST00000045026(transcript)|go:"GO:0000070"(mitotic sister chromatid segregation)|go:"GO:0000776"(kinetochore)|go:"GO:0005737"(cytoplasm)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0007051"(spindle organization)|go:"GO:0007059"(chromosome segregation)|go:"GO:0008017"(microtubule binding)|go:"GO:0016604"(nuclear body)|go:"GO:0030496"(midbody)|go:"GO:0032388"(positive regulation of intracellular transport)|go:"GO:0034451"(centriolar satellite)|go:"GO:0035253"(ciliary rootlet)|go:"GO:0035371"(microtubule plus-end)|refseq:NP_059103.1|entrezgene/locuslink:54141(identity) - - author-confidence:37.3698500050873 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:rWRtBlIeEsOudBt78Lgzu9Guw+U10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q80UZ0 intact:EBI-2323063 intact:EBI-11569760|uniprotkb:Q8BHM5 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:fgd5_mouse(display_long)|uniprotkb:Fgd5(gene name)|psi-mi:Fgd5(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) interpro:IPR000219("Dbl homology (DH) domain")|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR001849(Pleckstrin-like)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017455(Zinc finger, FYVE-related)|reactome:R-MMU-9013149|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0032587"(ruffle membrane)|go:"GO:0046872"(metal ion binding)|refseq:NP_766319.3|interpro:IPR035899|entrezgene/locuslink:232237(identity) - - author-confidence:16.395373951972353 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:N2S+tWYB6hs8qyZgRuEdJf5qGes10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHP8 uniprotkb:Q8CHQ0 intact:EBI-2323063 intact:EBI-3895153|uniprotkb:E9QPM9|uniprotkb:Q99JG8|ensembl:ENSMUSP00000022791 psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:fbx4_mouse(display_long)|uniprotkb:Fbxo4(gene name)|psi-mi:Fbxo4(display_short)|uniprotkb:Fbx4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569734|imex:IM-24977-38 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) refseq:NP_598860.2|ensembl:ENSMUSG00000022184(gene)|ensembl:ENSMUST00000022791(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0000723"(telomere maintenance)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007568"(aging)|go:"GO:0010608"(posttranscriptional regulation of gene expression)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0019725"(cellular homeostasis)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0031648"(protein destabilization)|go:"GO:0032212"(positive regulation of telomere maintenance via telomerase)|go:"GO:0035726"(common myeloid progenitor cell proliferation)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048147"(negative regulation of fibroblast proliferation)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0071479"(cellular response to ionizing radiation)|go:"GO:1900181"(negative regulation of protein localization to nucleus)|go:"GO:1902916"(positive regulation of protein polyubiquitination)|go:"GO:2000001"(regulation of DNA damage checkpoint)|interpro:IPR001810(Cyclin-like F-box)|interpro:IPR027417|interpro:IPR036047|interpro:IPR039588|reactome:R-MMU-8951664|reactome:R-MMU-983168|entrezgene/locuslink:106052(identity) - - author-confidence:395.90463729362983 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 rogid:dqv0G7q9Zl/0baC9E7XNerWmq5o10090 intact-crc:6FFF2F980EC7FAF6|rigid:vKKeOjD7XFIRM9OKF2HBFjWqSDs false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:Q99KV1 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-8328260|uniprotkb:Q8VHB1|uniprotkb:Q8VCY1|intact:MINT-1847287|uniprotkb:A6X957|uniprotkb:Q543I7|uniprotkb:Q8BK79|ensembl:ENSMUSP00000004574|ensembl:ENSMUSP00000126828|ensembl:ENSMUSP00000137542 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:djb11_mouse(display_long)|uniprotkb:Dnajb11(gene name)|psi-mi:Dnajb11(display_short)|uniprotkb:ER-associated Hsp40 co-chaperone(gene name synonym)|uniprotkb:ER-associated DNAJ(gene name synonym)|uniprotkb:APOBEC1-binding protein 2(gene name synonym)|uniprotkb:Endoplasmic reticulum DNA J domain-containing protein 3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) refseq:NP_080676.3|refseq:NP_001177733.1|refseq:NP_001177734.1|dip:DIP-60531N|ensembl:ENSMUSG00000004460(gene)|ensembl:ENSMUST00000004574(transcript)|ensembl:ENSMUST00000166487(transcript)|ensembl:ENSMUST00000178320(transcript)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005788"(endoplasmic reticulum lumen)|go:"GO:0006457"(protein folding)|go:"GO:0016556"(mRNA modification)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0034663"(endoplasmic reticulum chaperone complex)|go:"GO:0050768"(negative regulation of neurogenesis)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051604"(protein maturation)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0101031"(chaperone complex)|interpro:IPR001623(Heat shock protein DnaJ, N-terminal)|interpro:IPR002939(Chaperone DnaJ, C-terminal)|interpro:IPR008971(HSP40/DnaJ peptide-binding)|interpro:IPR018253|interpro:IPR036869|mint:Q99KV1|entrezgene/locuslink:67838(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" comment:mint|author-confidence:2.3135595186882276 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:AwepE58LUoN43LmBMkof6jEPNCA10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:Q6ZPJ3 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-6999453|ensembl:ENSMUSP00000080791|intact:MINT-7034165|uniprotkb:Q60800|uniprotkb:A2A7X3|uniprotkb:Q7TPN2|uniprotkb:Q8BLE8|uniprotkb:Q6PCR9 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:ube2o_mouse(display_long)|uniprotkb:E2/E3 hybrid ubiquitin-protein ligase UBE2O(gene name synonym)|uniprotkb:Ube2o(gene name)|psi-mi:Ube2o(display_short)|uniprotkb:Kiaa1734(gene name synonym)|uniprotkb:Ubiquitin-protein ligase O(gene name synonym)|uniprotkb:Ubiquitin carrier protein O(gene name synonym)|uniprotkb:Ubiquitin-conjugating enzyme E2 of 230 kDa(gene name synonym)|uniprotkb:Ubiquitin-conjugating enzyme E2 O(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) ensembl:ENSMUSG00000020802(gene)|ensembl:ENSMUST00000082152(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0004869"(cysteine-type endopeptidase inhibitor activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006513"(protein monoubiquitination)|go:"GO:0016604"(nuclear body)|go:"GO:0030513"(positive regulation of BMP signaling pathway)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0061631"(ubiquitin conjugating enzyme activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|interpro:IPR016135(Ubiquitin-conjugating enzyme/RWD-like)|mint:Q6ZPJ3|reactome:R-MMU-983168|interpro:IPR000608(Ubiquitin-conjugating enzyme, E2)|refseq:NP_776116.2|entrezgene/locuslink:217342(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" comment:mint|author-confidence:2.069904805085154 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:7DrbsONnQCbVgpH24alvrdtoyJg10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:Q91ZD1 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-3865051|uniprotkb:Q8BPV6|uniprotkb:Q91V54|ensembl:ENSMUSP00000154286 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:osr2_mouse(display_long)|uniprotkb:Osr2(gene name)|psi-mi:Osr2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) refseq:NP_473390.1|refseq:XP_006520076.1|ensembl:ENSMUSG00000022330(gene)|ensembl:ENSMUST00000228152(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001655"(urogenital system development)|go:"GO:0001656"(metanephros development)|go:"GO:0001823"(mesonephros development)|go:"GO:0002062"(chondrocyte differentiation)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0009792"(embryo development ending in birth or egg hatching)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0030154"(cell differentiation)|go:"GO:0030501"(positive regulation of bone mineralization)|go:"GO:0033687"(osteoblast proliferation)|go:"GO:0035115"(embryonic forelimb morphogenesis)|go:"GO:0035116"(embryonic hindlimb morphogenesis)|go:"GO:0036023"(embryonic skeletal limb joint morphogenesis)|go:"GO:0042474"(middle ear morphogenesis)|go:"GO:0042476"(odontogenesis)|go:"GO:0042733"(embryonic digit morphogenesis)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0048704"(embryonic skeletal system morphogenesis)|go:"GO:0048793"(pronephros development)|go:"GO:0050679"(positive regulation of epithelial cell proliferation)|go:"GO:0060021"(roof of mouth development)|go:"GO:0060272"(embryonic skeletal joint morphogenesis)|go:"GO:0060322"(head development)|go:"GO:0060349"(bone morphogenesis)|go:"GO:0061029"(eyelid development in camera-type eye)|go:"GO:0072498"(embryonic skeletal joint development)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:2000543"(positive regulation of gastrulation)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|rcsb pdb:2EE8|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|entrezgene/locuslink:107587(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" author-confidence:24.481497414404007 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:YFW6RBfzJaNqvswhrBVkWOm/WaM10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:P62869 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-2659323|uniprotkb:Q80W20|uniprotkb:Q63529|ensembl:ENSMUSP00000066210 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:elob_mouse(display_long)|uniprotkb:Elob(gene name)|psi-mi:Elob(display_short)|uniprotkb:Elongin 18 kDa subunit(gene name synonym)|uniprotkb:RNA polymerase II transcription factor SIII subunit B(gene name synonym)|uniprotkb:SIII p18(gene name synonym)|uniprotkb:Tceb2(gene name synonym)|uniprotkb:Transcription elongation factor B polypeptide 2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) refseq:NP_080581.1|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031462"(Cul2-RING ubiquitin ligase complex)|go:"GO:0031466"(Cul5-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070449"(elongin complex)|interpro:IPR000626(Ubiquitin)|interpro:IPR029071|go:"GO:0030891"(VCB complex)|interpro:IPR039049|mint:P62869|rcsb pdb:2FNJ|rcsb pdb:4JGH|reactome:R-MMU-112382|reactome:R-MMU-1234176|reactome:R-MMU-674695|reactome:R-MMU-6796648|reactome:R-MMU-75955|reactome:R-MMU-8951664|reactome:R-MMU-9705462|reactome:R-MMU-983168|ensembl:ENSMUSG00000055839(gene)|ensembl:ENSMUST00000069579(transcript)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|entrezgene/locuslink:67673(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" author-confidence:128.5277721748102 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:7W4I9AcvS1GK89dMmBOImMYNgLY10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:Q9D5V5 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-2659351|uniprotkb:Q8C098|uniprotkb:Q8BV53|uniprotkb:Q8BMQ6 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:cul5_mouse(display_long)|uniprotkb:Cul5(gene name)|psi-mi:Cul5(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) reactome:R-MMU-9705462|refseq:NP_001155090.1|refseq:NP_082083.2|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR019559|interpro:IPR016159(Cullin repeat-like)|rcsb pdb:2WZK|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0021799"(cerebral cortex radially oriented cell migration)|go:"GO:0005886"(plasma membrane)|go:"GO:0021942"(radial glia guided migration of Purkinje cell)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031466"(Cul5-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0051480"(regulation of cytosolic calcium ion concentration)|go:"GO:0090734"(site of DNA damage)|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|reactome:R-MMU-8863795|reactome:R-MMU-8951664|reactome:R-MMU-983168|entrezgene/locuslink:75717(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" author-confidence:14.464521910181555 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:qraskMw8kyT/RJDDABcMrJjP41Y10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:P61219 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-11569930|ensembl:ENSMUSP00000155332 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:rpab2_mouse(display_long)|uniprotkb:DNA-directed RNA polymerase II subunit F(gene name synonym)|uniprotkb:RPB6 homolog(gene name synonym)|uniprotkb:Polr2f(gene name)|psi-mi:Polr2f(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) refseq:NP_081507.1|ensembl:ENSMUSG00000033020(gene)|ensembl:ENSMUST00000230271(transcript)|go:"GO:0001650"(fibrillar center)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0006366"(transcription by RNA polymerase II)|interpro:IPR006110(RNA polymerase Rpb6)|interpro:IPR006111(DNA-directed RNA polymerase, 14 to 18 kDa subunit)|interpro:IPR012293(RNA polymerase subunit, RPB6/omega)|interpro:IPR020708|interpro:IPR036161|reactome:R-MMU-112382|reactome:R-MMU-113418|reactome:R-MMU-5250924|reactome:R-MMU-5578749|reactome:R-MMU-674695|reactome:R-MMU-6781823|reactome:R-MMU-6782135|reactome:R-MMU-6782210|reactome:R-MMU-6796648|reactome:R-MMU-6803529|reactome:R-MMU-6807505|reactome:R-MMU-72086|reactome:R-MMU-72163|reactome:R-MMU-72165|reactome:R-MMU-72203|reactome:R-MMU-73762|reactome:R-MMU-73772|reactome:R-MMU-73776|reactome:R-MMU-73779|reactome:R-MMU-73863|reactome:R-MMU-75953|reactome:R-MMU-75955|reactome:R-MMU-76042|reactome:R-MMU-76061|reactome:R-MMU-76066|reactome:R-MMU-76071|reactome:R-MMU-77075|reactome:R-MMU-9018519|interpro:IPR028363|entrezgene/locuslink:69833(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" author-confidence:211.78985361082005 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:P5wIaCTdfx0Nbi5t60h9Ut0NMjw10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:Q921C5 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-642984|uniprotkb:Q80TU1|uniprotkb:Q8BTE3|uniprotkb:Q9DCL3|ensembl:ENSMUSP00000105712 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:bicd2_mouse(display_long)|uniprotkb:Bicd2(gene name)|psi-mi:Bicd2(display_short)|uniprotkb:Kiaa0699(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) refseq:NP_001034269.1|refseq:NP_001034268.1|refseq:NP_084067.1|ensembl:ENSMUSG00000037933(gene)|ensembl:ENSMUST00000110085(transcript)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005642"(annulate lamellae)|go:"GO:0005643"(nuclear pore)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0007018"(microtubule-based movement)|go:"GO:0008093"(cytoskeletal anchor activity)|go:"GO:0015031"(protein transport)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0051028"(mRNA transport)|go:"GO:0051642"(centrosome localization)|go:"GO:0051959"(dynein light intermediate chain binding)|go:"GO:0070507"(regulation of microtubule cytoskeleton organization)|go:"GO:0070840"(dynein complex binding)|go:"GO:0072385"(minus-end-directed organelle transport along microtubule)|go:"GO:0072393"(microtubule anchoring at microtubule organizing center)|interpro:IPR018477|mint:Q921C5|reactome:R-MMU-6811436|go:"GO:0034452"(dynactin binding)|dip:DIP-49453N|entrezgene/locuslink:76895(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" author-confidence:9.465940998073966 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:dAuH2ow12eQPI8yTZQfH6I4E9LE10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:Q5RJ54 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-11569921|uniprotkb:Q6NVD7|ensembl:ENSMUSP00000106111 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:zsc26_mouse(display_long)|uniprotkb:Zfp187(gene name synonym)|uniprotkb:Zinc finger protein 187(gene name synonym)|uniprotkb:Znf187(gene name synonym)|uniprotkb:Zscan26(gene name)|psi-mi:Zscan26(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) refseq:XP_011242620.1|refseq:NP_001013808.2|refseq:NP_001334420.1|ensembl:ENSMUSG00000022228(gene)|ensembl:ENSMUST00000110485(transcript)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR003309(Transcriptional regulator SCAN)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|interpro:IPR038269|entrezgene/locuslink:432731(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" author-confidence:3.716760766771566 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:FG9wm+IBVlw6ShH4SrediWqWBEE10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:Q9EQF6 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-773236|ensembl:ENSMUSP00000085400|ensembl:ENSMUSP00000110377 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:dpyl5_mouse(display_long)|uniprotkb:Collapsin response mediator protein 5(gene name synonym)|uniprotkb:Dpysl5(gene name)|psi-mi:Dpysl5(display_short)|uniprotkb:Crmp5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) refseq:NP_075534.1|refseq:XP_006504108.1|ensembl:ENSMUSG00000029168(gene)|ensembl:ENSMUST00000088081(transcript)|ensembl:ENSMUST00000114729(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0007411"(axon guidance)|go:"GO:0008017"(microtubule binding)|go:"GO:0016810"("hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds")|go:"GO:0030425"(dendrite)|go:"GO:0032991"(protein-containing complex)|go:"GO:0043025"(neuronal cell body)|interpro:IPR006680(Amidohydrolase 1)|interpro:IPR011059(Metal-dependent hydrolase, composite)|interpro:IPR011778(D-hydantoinase)|interpro:IPR030626|interpro:IPR032466|mint:Q9EQF6|reactome:R-MMU-399956|entrezgene/locuslink:65254(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" author-confidence:16.573518570416212 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:MmMBysVIbDgoAr5T9kOtULThKc810090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:Q8BR07 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-11569902|uniprotkb:Q8R2J4|uniprotkb:Q8R2J6|uniprotkb:Q8BQ18|uniprotkb:O55206|uniprotkb:Q8BRR8|uniprotkb:Q8CAK6|uniprotkb:Q8R2J5|uniprotkb:Q91YP7|uniprotkb:Q8C4D3|ensembl:ENSMUSP00000084039 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:bicd1_mouse(display_long)|uniprotkb:Bicd1(gene name)|psi-mi:Bicd1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) refseq:NP_001106267.1|refseq:NP_033883.2|ensembl:ENSMUSG00000003452(gene)|ensembl:ENSMUST00000086829(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0008093"(cytoskeletal anchor activity)|go:"GO:0016020"(membrane)|go:"GO:0016032"(viral process)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031871"(proteinase activated receptor binding)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0034063"(stress granule assembly)|go:"GO:0034452"(dynactin binding)|go:"GO:0045505"(dynein intermediate chain binding)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0070507"(regulation of microtubule cytoskeleton organization)|go:"GO:0070840"(dynein complex binding)|go:"GO:0072385"(minus-end-directed organelle transport along microtubule)|go:"GO:0072393"(microtubule anchoring at microtubule organizing center)|go:"GO:0099503"(secretory vesicle)|go:"GO:1900275"(negative regulation of phospholipase C activity)|go:"GO:1900276"(regulation of proteinase activated receptor activity)|go:"GO:1900737"(negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway)|go:"GO:1904781"(positive regulation of protein localization to centrosome)|interpro:IPR018477|rcsb pdb:4YTD|reactome:R-MMU-6811436|entrezgene/locuslink:12121(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" author-confidence:248.3034313366737 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:QOTowHhJW2Un41U6Unj+HWEuVlM10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:Q69ZK0 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-645862|uniprotkb:A2A5U1|uniprotkb:Q6PFD4|uniprotkb:Q8BN08|ensembl:ENSMUSP00000037180 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:prex1_mouse(display_long)|uniprotkb:Prex1(gene name)|psi-mi:Prex1(display_short)|uniprotkb:Kiaa1415(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) refseq:NP_808450.2|ensembl:ENSMUSG00000039621(gene)|ensembl:ENSMUST00000036719(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0007186"(G protein-coupled receptor signaling pathway)|go:"GO:0030217"(T cell differentiation)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030426"(growth cone)|go:"GO:0030593"(neutrophil chemotaxis)|go:"GO:0030833"(regulation of actin filament polymerization)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0043198"(dendritic shaft)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045785"(positive regulation of cell adhesion)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0072593"(reactive oxygen species metabolic process)|go:"GO:1900026"(positive regulation of substrate adhesion-dependent cell spreading)|interpro:IPR000219("Dbl homology (DH) domain")|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR001331(Guanine-nucleotide dissociation stimulator, CDC24, conserved site)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001849(Pleckstrin-like)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR035899|interpro:IPR036034|interpro:IPR036388|interpro:IPR036390|reactome:R-MMU-193648|reactome:R-MMU-416482|reactome:R-MMU-9013148|reactome:R-MMU-9013149|reactome:R-MMU-9013404|reactome:R-MMU-9013406|reactome:R-MMU-9013408|reactome:R-MMU-9013409|reactome:R-MMU-9013423|reactome:R-MMU-8980692|reactome:R-MMU-9013026|reactome:R-MMU-9013106|entrezgene/locuslink:277360(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" author-confidence:1.8244650752652085 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:ZIutFFrewJcYdGQ2jnIHauqR03k10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 intact:EBI-11569915 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 - psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:d3z492_mouse(display_short)|psi-mi:EBI-11569915(display_long)|uniprotkb:Abcb8(gene name)|psi-mi:Abcb8(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) uniprotkb:D3Z492(uniprot-removed-ac)|entrezgene/locuslink:74610(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" no-uniprot-update:|caution:The sequence has been withdrawn from uniprot.|author-confidence:317.4865543653464 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:zS59CIAt+PXdr6b97aob7fEu5Bo10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:E9Q8N1 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-11568994|ensembl:ENSMUSP00000107477 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:e9q8n1_mouse(display_long)|uniprotkb:Ttn(gene name)|psi-mi:Ttn(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) refseq:NP_035782.3|ensembl:ENSMUSG00000051747(gene)|ensembl:ENSMUST00000111846(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|interpro:IPR000719(Protein kinase, core)|interpro:IPR003598(Immunoglobulin subtype 2)|interpro:IPR003599(Immunoglobulin subtype)|interpro:IPR003961(Fibronectin, type III)|interpro:IPR004168(PPAK motif)|interpro:IPR007110(Immunoglobulin-like)|interpro:IPR008266(Tyrosine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR013098(Immunoglobulin I-set)|interpro:IPR013106(Immunoglobulin V-set)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR015129(Titin Z)|interpro:IPR036116|interpro:IPR036179|interpro:IPR040849|entrezgene/locuslink:22138(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" author-confidence:1.5454670405680635 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:/5mTaVZ4ZpLMty4vlje7jgzRtxU10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:Q6ZPV2 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-3043902|ensembl:ENSMUSP00000051845|uniprotkb:A2AQP8|uniprotkb:Q6P7V0|uniprotkb:Q6PCP1|uniprotkb:Q8C9T7 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:ino80_mouse(display_long)|uniprotkb:Ino80(gene name)|psi-mi:Ino80(display_short)|uniprotkb:Inoc1(gene name synonym)|uniprotkb:Kiaa1259(gene name synonym)|uniprotkb:DNA helicase-related INO80 complex homolog 1(gene name synonym)|uniprotkb:DNA helicase-related protein INO80(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) ensembl:ENSMUSG00000034154(gene)|ensembl:ENSMUST00000049920(transcript)|go:"GO:0000070"(mitotic sister chromatid segregation)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0003677"(DNA binding)|go:"GO:0003779"(actin binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005874"(microtubule)|go:"GO:0006281"(DNA repair)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0010571"(positive regulation of nuclear cell cycle DNA replication)|go:"GO:0016604"(nuclear body)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0031011"(Ino80 complex)|go:"GO:0034644"(cellular response to UV)|go:"GO:0042393"(histone binding)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043014"(alpha-tubulin binding)|go:"GO:0043044"|go:"GO:0043618"(regulation of transcription from RNA polymerase II promoter in response to stress)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051225"(spindle assembly)|go:"GO:0051301"(cell division)|go:"GO:0070615"|go:"GO:0070914"(UV-damage excision repair)|go:"GO:0071479"(cellular response to ionizing radiation)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:2000045"(regulation of G1/S transition of mitotic cell cycle)|interpro:IPR000330(SNF2-related)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR020838|interpro:IPR027417|interpro:IPR031047|interpro:IPR038718|mint:Q6ZPV2|reactome:R-MMU-5689603|reactome:R-MMU-5696394|refseq:NP_080850.2|entrezgene/locuslink:68142(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" author-confidence:4.1046447906979235 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:4TfoC8GVpirZZMPsohrCRYf8A3I10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:P06151 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-444940|ensembl:ENSMUSP00000036386|ensembl:ENSMUSP00000103267 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:ldha_mouse(display_long)|uniprotkb:LDH muscle subunit(gene name synonym)|uniprotkb:Ldha(gene name)|psi-mi:Ldha(display_short)|uniprotkb:Ldh-1(gene name synonym)|uniprotkb:Ldh1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) refseq:NP_034829.1|ensembl:ENSMUSG00000063229(gene)|ensembl:ENSMUST00000005051(transcript)|ensembl:ENSMUST00000048209(transcript)|go:"GO:0004457"(lactate dehydrogenase activity)|go:"GO:0004459"(L-lactate dehydrogenase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0019244"(lactate biosynthetic process from pyruvate)|go:"GO:0019661"(glucose catabolic process to lactate via pyruvate)|go:"GO:0031668"(cellular response to extracellular stimulus)|go:"GO:0035686"(sperm fibrous sheath)|go:"GO:0042802"(identical protein binding)|interpro:IPR001236(Lactate/malate dehydrogenase)|interpro:IPR001557(L-lactate/malate dehydrogenase)|interpro:IPR011304(L-lactate dehydrogenase)|interpro:IPR015955(Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal)|interpro:IPR018177|interpro:IPR022383|interpro:IPR036291|mint:P06151|reactome:R-MMU-70268|entrezgene/locuslink:16828(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" author-confidence:5.943032992454736 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:IErFuOIWq53/XyIxWgUyVi76VnM10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8VHQ4 uniprotkb:Q8K2Q2 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-11569926|ensembl:ENSMUSP00000052592|ensembl:ENSMUSP00000113409|ensembl:ENSMUSP00000119680 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:gsto2_mouse(display_long)|uniprotkb:Glutathione S-transferase omega 2-2(gene name synonym)|uniprotkb:Glutathione-dependent dehydroascorbate reductase(gene name synonym)|uniprotkb:Monomethylarsonic acid reductase(gene name synonym)|uniprotkb:Gsto2(gene name)|psi-mi:Gsto2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11569919|imex:IM-24977-39 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) refseq:NP_080895.2|refseq:NP_084327.1|ensembl:ENSMUSG00000025069(gene)|ensembl:ENSMUST00000056159(transcript)|ensembl:ENSMUST00000120645(transcript)|ensembl:ENSMUST00000135016(transcript)|go:"GO:0004364"(glutathione transferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006749"(glutathione metabolic process)|go:"GO:0006805"(xenobiotic metabolic process)|go:"GO:0016491"(oxidoreductase activity)|go:"GO:0019852"(L-ascorbic acid metabolic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0045174"("glutathione dehydrogenase (ascorbate) activity")|go:"GO:0050610"(methylarsonate reductase activity)|go:"GO:0071243"(cellular response to arsenic-containing substance)|interpro:IPR004045(Glutathione S-transferase, N-terminal)|interpro:IPR005442(Glutathione S-transferase, omega-class)|interpro:IPR010987(Glutathione S-transferase, C-terminal-like)|interpro:IPR036249|interpro:IPR036282|interpro:IPR040079|reactome:R-MMU-156590|reactome:R-MMU-196836|entrezgene/locuslink:68214(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" author-confidence:1.6863048200792903 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:Sald63cKPn8HVa1taGgpbSbV79c10090 intact-crc:232DEFBC07269911|rigid:8hn6MDtTvFtm8mbNTl+nuyezsrg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q9D554 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-8338145|intact:MINT-1853954|ensembl:ENSMUSP00000030734 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:sf3a3_mouse(display_long)|uniprotkb:Sf3a3(gene name)|psi-mi:Sf3a3(display_short)|uniprotkb:Sap61(gene name synonym)|uniprotkb:Spliceosome-associated protein 61(gene name synonym)|uniprotkb:SF3a60(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_083433.1|ensembl:ENSMUSG00000028902(gene)|ensembl:ENSMUST00000030734(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005686"(U2 snRNP)|go:"GO:0006397"(mRNA processing)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016607"(nuclear speck)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1903241"(U2-type prespliceosome assembly)|interpro:IPR000690(Zinc finger, C2H2-type matrin)|interpro:IPR021966|interpro:IPR024598|interpro:IPR031774|interpro:IPR031776|mint:Q9D554|reactome:R-MMU-72163|entrezgene/locuslink:75062(identity) - - function:"Subunit of the splicing factor SF3A required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex"|comment:mint|author-confidence:6.115287057382916 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:1uFDDd2qMaHNBnQBzY/Go+IVACc10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q9Z110 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-8440240|intact:MINT-1853829|uniprotkb:Q8BGM2|uniprotkb:Q9R1P6|ensembl:ENSMUSP00000025979 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:p5cs_mouse(display_long)|uniprotkb:Aldh18a1(gene name)|psi-mi:Aldh18a1(display_short)|uniprotkb:P5cs(gene name synonym)|uniprotkb:Pycs(gene name synonym)|uniprotkb:Aldehyde dehydrogenase family 18 member A1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_705782.2|refseq:NP_062672.2|ensembl:ENSMUSG00000025007(gene)|ensembl:ENSMUST00000025979(transcript)|go:"GO:0004349"(glutamate 5-kinase activity)|go:"GO:0004350"(glutamate-5-semialdehyde dehydrogenase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0006536"(glutamate metabolic process)|go:"GO:0006561"(proline biosynthetic process)|go:"GO:0006592"(ornithine biosynthetic process)|go:"GO:0008652"(cellular amino acid biosynthetic process)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0019240"(citrulline biosynthetic process)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0055129"(L-proline biosynthetic process)|interpro:IPR000965(Gamma-glutamyl phosphate reductase GPR)|interpro:IPR001048(Aspartate/glutamate/uridylate kinase)|interpro:IPR001057(Glutamate 5-kinase)|interpro:IPR005715(Glutamate 5-kinase, ProB-related)|interpro:IPR005766(delta l-pyrroline-5-carboxylate synthetase)|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR019797|interpro:IPR020593|interpro:IPR036393|interpro:IPR041744|mint:Q9Z110|reactome:R-MMU-8964539|entrezgene/locuslink:56454(identity) - - comment:mint|author-confidence:1.1686501171863146 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:bzLtsuFfMe3vEyBVOmcAcLYvbVs10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q99KV1 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-8328260|uniprotkb:Q8VHB1|uniprotkb:Q8VCY1|intact:MINT-1847287|uniprotkb:A6X957|uniprotkb:Q543I7|uniprotkb:Q8BK79|ensembl:ENSMUSP00000004574|ensembl:ENSMUSP00000126828|ensembl:ENSMUSP00000137542 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:djb11_mouse(display_long)|uniprotkb:Dnajb11(gene name)|psi-mi:Dnajb11(display_short)|uniprotkb:ER-associated Hsp40 co-chaperone(gene name synonym)|uniprotkb:ER-associated DNAJ(gene name synonym)|uniprotkb:APOBEC1-binding protein 2(gene name synonym)|uniprotkb:Endoplasmic reticulum DNA J domain-containing protein 3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_080676.3|refseq:NP_001177733.1|refseq:NP_001177734.1|dip:DIP-60531N|ensembl:ENSMUSG00000004460(gene)|ensembl:ENSMUST00000004574(transcript)|ensembl:ENSMUST00000166487(transcript)|ensembl:ENSMUST00000178320(transcript)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005788"(endoplasmic reticulum lumen)|go:"GO:0006457"(protein folding)|go:"GO:0016556"(mRNA modification)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0034663"(endoplasmic reticulum chaperone complex)|go:"GO:0050768"(negative regulation of neurogenesis)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051604"(protein maturation)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0101031"(chaperone complex)|interpro:IPR001623(Heat shock protein DnaJ, N-terminal)|interpro:IPR002939(Chaperone DnaJ, C-terminal)|interpro:IPR008971(HSP40/DnaJ peptide-binding)|interpro:IPR018253|interpro:IPR036869|mint:Q99KV1|entrezgene/locuslink:67838(identity) - - comment:mint|author-confidence:2.002252690465693 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:AwepE58LUoN43LmBMkof6jEPNCA10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q3TJZ6 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-8318357|intact:MINT-1858128|uniprotkb:Q99KJ2|ensembl:ENSMUSP00000108126 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:fa98a_mouse(display_long)|uniprotkb:Fam98a(gene name)|psi-mi:Fam98a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_598508.2|ensembl:ENSMUSG00000002017(gene)|ensembl:ENSMUST00000112507(transcript)|go:"GO:0006479"(protein methylation)|go:"GO:0008276"(protein methyltransferase activity)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0032418"(lysosome localization)|go:"GO:0072669"(tRNA-splicing ligase complex)|go:"GO:1900029"(positive regulation of ruffle assembly)|interpro:IPR018797|mint:Q3TJZ6|entrezgene/locuslink:72722(identity) - - comment:mint|author-confidence:6.0147906443730035 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:ZvcKhnXQtXNW4jEx2X8IvALCfZU10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:O35286 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-8322087|uniprotkb:Q99L91|intact:MINT-4093075|ensembl:ENSMUSP00000031061 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:dhx15_mouse(display_long)|uniprotkb:Dhx15(gene name)|psi-mi:Dhx15(display_short)|uniprotkb:Ddx15(gene name synonym)|uniprotkb:Deah9(gene name synonym)|uniprotkb:DEAH box protein 15(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_031865.2|dip:DIP-61875N|ensembl:ENSMUSG00000029169(gene)|ensembl:ENSMUST00000031061(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|go:"GO:0009636"(response to toxic substance)|go:"GO:0016607"(nuclear speck)|go:"GO:0043279"(response to alkaloid)|go:"GO:0071008"(U2-type post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|mint:O35286|reactome:R-MMU-72163|entrezgene/locuslink:13204(identity) - - comment:mint|function:Pre-mRNA processing factor involved in disassembly of spliceosomes after the release of mature mRNA|author-confidence:2.21663313811206 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:3ypGFohz40OvVMkbdam/EUAw9hc10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:P15379 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-7565891|intact:EBI-15579519|uniprotkb:Q62063|uniprotkb:Q62061|uniprotkb:Q05732|intact:UNK-5943644|uniprotkb:Q9QYX8|uniprotkb:Q62408|uniprotkb:Q99J14|uniprotkb:Q64296|uniprotkb:Q61395|uniprotkb:Q62060|uniprotkb:Q62062|uniprotkb:Q62409 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:cd44_mouse(display_long)|uniprotkb:Phagocytic glycoprotein I(gene name synonym)|uniprotkb:Cd44(gene name)|psi-mi:Cd44(display_short)|uniprotkb:Ly-24(gene name synonym)|uniprotkb:Phagocytic glycoprotein 1(gene name synonym)|uniprotkb:HUTCH-I(gene name synonym)|uniprotkb:Extracellular matrix receptor III(gene name synonym)|uniprotkb:GP90 lymphocyte homing/adhesion receptor(gene name synonym)|uniprotkb:Hermes antigen(gene name synonym)|uniprotkb:Hyaluronate receptor(gene name synonym)|uniprotkb:Lymphocyte antigen 24(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_001171257.1|refseq:NP_001034240.1|refseq:NP_001171258.1|refseq:NP_033981.2|refseq:NP_001171256.1|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001658"(branching involved in ureteric bud morphogenesis)|go:"GO:0002246"(wound healing involved in inflammatory response)|go:"GO:0002821"(positive regulation of adaptive immune response)|go:"GO:0002906"(negative regulation of mature B cell apoptotic process)|go:"GO:0004888"(transmembrane signaling receptor activity)|go:"GO:0005114"(type II transforming growth factor beta receptor binding)|go:"GO:0005154"(epidermal growth factor receptor binding)|go:"GO:0005540"(hyaluronic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005902"(microvillus)|go:"GO:0006954"(inflammatory response)|go:"GO:0007155"(cell adhesion)|go:"GO:0009897"(external side of plasma membrane)|go:"GO:0009986"(cell surface)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0016477"(cell migration)|go:"GO:0019221"(cytokine-mediated signaling pathway)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030214"(hyaluronan catabolic process)|go:"GO:0031175"(neuron projection development)|go:"GO:0031258"(lamellipodium membrane)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033031"(positive regulation of neutrophil apoptotic process)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034116"(positive regulation of heterotypic cell-cell adhesion)|go:"GO:0034238"(macrophage fusion)|go:"GO:0035692"(macrophage migration inhibitory factor receptor complex)|go:"GO:0042110"(T cell activation)|go:"GO:0042995"(cell projection)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043154"(negative regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0043518"(negative regulation of DNA damage response, signal transduction by p53 class mediator)|go:"GO:0044319"(wound healing, spreading of cells)|go:"GO:0044344"(cellular response to fibroblast growth factor stimulus)|go:"GO:0045590"(negative regulation of regulatory T cell differentiation)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050731"(positive regulation of peptidyl-tyrosine phosphorylation)|go:"GO:0051219"(phosphoprotein binding)|go:"GO:0060442"(branching involved in prostate gland morphogenesis)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0070487"(monocyte aggregation)|go:"GO:1900625"(positive regulation of monocyte aggregation)|go:"GO:1902166"(negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator)|go:"GO:2000392"(regulation of lamellipodium morphogenesis)|go:"GO:2000562"(negative regulation of CD4-positive, alpha-beta T cell proliferation)|interpro:IPR000538(Link)|interpro:IPR001231(CD44 antigen)|interpro:IPR016186(C-type lectin-like)|interpro:IPR016187(C-type lectin fold)|interpro:IPR043210|rcsb pdb:2JCP|rcsb pdb:2JCQ|rcsb pdb:5BZJ|rcsb pdb:2JCR|rcsb pdb:5BZK|rcsb pdb:5BZL|rcsb pdb:5BZM|rcsb pdb:5BZN|rcsb pdb:5BZO|rcsb pdb:2ZPY|rcsb pdb:5BZP|rcsb pdb:5BZQ|rcsb pdb:5BZR|rcsb pdb:5BZS|rcsb pdb:5BZT|rcsb pdb:4MRD|rcsb pdb:4MRE|rcsb pdb:4MRF|rcsb pdb:4MRG|rcsb pdb:4MRH|rcsb pdb:4NP2|rcsb pdb:4NP3|rcsb pdb:5BZC|rcsb pdb:5BZE|rcsb pdb:5BZF|rcsb pdb:5BZG|rcsb pdb:5BZH|rcsb pdb:5BZI|dip:DIP-29095N|reactome:R-MMU-1474228|reactome:R-MMU-202733|reactome:R-MMU-216083|reactome:R-MMU-2160916|reactome:R-MMU-6798695|entrezgene/locuslink:12505(identity) - - function:Main cell surface receptor for hyaluronate. Adhesion to mucosal high endothelial venule and to types I and VI collagen. Probably involved in matrix adhesion, lymphocyte activation and lymph node homing|comment:mint|author-confidence:1.3707139529362624 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:1Rlb+aBsm9z0HJuB6Oz4Oilui1o10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q99JW2 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-8319756|uniprotkb:Q9CR15|intact:MINT-1856196 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:acy1_mouse(display_long)|uniprotkb:Acy1(gene name)|psi-mi:Acy1(display_short)|uniprotkb:N-acyl-L-amino-acid amidohydrolase(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_079647.1|refseq:NP_001263371.1|mint:Q99JW2|interpro:IPR036264|interpro:IPR001261(ArgE/DapE/ACY1/CPG2/YscS, conserved site)|interpro:IPR002933(Peptidase M20)|interpro:IPR010159(N-acyl-L-amino-acid amidohydrolase)|interpro:IPR011650(Peptidase M20, dimerisation)|go:"GO:0004046"(aminoacylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006520"(cellular amino acid metabolic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0070062"(extracellular exosome)|reactome:R-MMU-5423646|entrezgene/locuslink:109652(identity) - - comment:mint|function:"Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate)"|author-confidence:1.2202370858539249 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:U5YorOaULLpEYLtPFkoORPvvR8U10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q3UKJ7 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-8329447|uniprotkb:Q8BMY4|uniprotkb:Q6PFR6|uniprotkb:Q9JJ70|uniprotkb:Q9D1I8|intact:MINT-4129849|ensembl:ENSMUSP00000030117 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:smu1_mouse(display_long)|uniprotkb:Smu1(gene name)|psi-mi:Smu1(display_short)|uniprotkb:Smu-1 suppressor of mec-8 and unc-52 protein homolog(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_067510.3|ensembl:ENSMUSG00000028409(gene)|ensembl:ENSMUST00000030117(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008380"(RNA splicing)|go:"GO:0016607"(nuclear speck)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071011"(precatalytic spliceosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR006594(LisH dimerisation motif)|interpro:IPR006595(CTLH, C-terminal to LisH motif)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|mint:Q3UKJ7|entrezgene/locuslink:74255(identity) - - comment:mint|author-confidence:1.075472270665579 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:zbTRfKynNIUSFY8IEqyYWh3JSho10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q6PAR5 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-8318309|uniprotkb:Q9CRS2|uniprotkb:Q80ZK4|intact:MINT-4125168|uniprotkb:A2AR17|uniprotkb:Q6ZPP0|uniprotkb:Q3TNS1|uniprotkb:Q80V37|uniprotkb:Q9CTI1|uniprotkb:A2AR09|uniprotkb:Q8BTS5|uniprotkb:Q3UYD5|uniprotkb:A2AR10|uniprotkb:A2AR18|uniprotkb:Q3UDL0|uniprotkb:A0PJI8|ensembl:ENSMUSP00000108723 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:gapd1_mouse(display_long)|uniprotkb:Gapvd1(gene name)|psi-mi:Gapvd1(display_short)|uniprotkb:Gapex5(gene name synonym)|uniprotkb:Kiaa1521(gene name synonym)|uniprotkb:Rab5-activating protein 6(gene name synonym)|uniprotkb:GAPex-5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:XP_011237449.1|refseq:XP_011237450.1|refseq:NP_079985.2|ensembl:ENSMUSG00000026867(gene)|ensembl:ENSMUST00000113099(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006897"(endocytosis)|go:"GO:0007165"(signal transduction)|go:"GO:0032794"(GTPase activating protein binding)|go:"GO:0043087"(regulation of GTPase activity)|go:"GO:0051223"(regulation of protein transport)|interpro:IPR001936(Ras GTPase-activating protein)|interpro:IPR003123(Vacuolar sorting protein 9)|interpro:IPR008936(Rho GTPase activation protein)|interpro:IPR037191|interpro:IPR041545|mint:Q6PAR5|reactome:R-MMU-8856828|reactome:R-MMU-8876198|entrezgene/locuslink:66691(identity) - - comment:mint|author-confidence:4.164264332341459 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:NMkiRQlKeIDPhZDCyCF5UZ3lmPE10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q571I9 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-8391142|intact:MINT-4113910|uniprotkb:Q3U6I2|intact:MINT-1869939|uniprotkb:Q8VD78|uniprotkb:Q3UMC3|uniprotkb:Q8C0L4 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:a16a1_mouse(display_long)|uniprotkb:Aldh16a1(gene name)|psi-mi:Aldh16a1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|refseq:NP_666066.1|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|mint:Q571I9|go:"GO:0016620"(oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor)|interpro:IPR011408(Aldehyde dehydrogenase predicted, duplicated region)|entrezgene/locuslink:69748(identity) - - author-confidence:7.521165829791563 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:CJyLPOT7Nc94VcIpenyDgHuKR/I10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q9JHJ3 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-8361332|uniprotkb:Q3UBV7|uniprotkb:Q3TUF5|intact:MINT-4129658|uniprotkb:Q8C6H7|ensembl:ENSMUSP00000135398 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:glmp_mouse(display_long)|uniprotkb:Glmp(gene name)|psi-mi:Glmp(display_short)|uniprotkb:Lysosomal protein NCU-G1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_064387.1|ensembl:ENSMUSG00000001418(gene)|ensembl:ENSMUST00000177005(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005764"(lysosome)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005829"(cytosol)|go:"GO:0016021"(integral component of membrane)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050821"(protein stabilization)|go:"GO:0061462"(protein localization to lysosome)|interpro:IPR029382|mint:Q9JHJ3|rcsb pdb:6NYQ|entrezgene/locuslink:56700(identity) - - comment:mint|function:Does not seem to be involved in inflammatory regulation|author-confidence:1.033524389569079 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:xjwKbxHO8TtC2Yw+D5Pf03YGD5810090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q9DBG6 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-529941|uniprotkb:Q3TKY0|uniprotkb:Q91XH0|uniprotkb:A2ACG6|ensembl:ENSMUSP00000112081 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:rpn2_mouse(display_long)|uniprotkb:Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDa subunit(gene name synonym)|uniprotkb:Ribophorin-2(gene name synonym)|uniprotkb:Ribophorin II(gene name synonym)|uniprotkb:Rpn2(gene name)|psi-mi:Rpn2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_062616.2|ensembl:ENSMUSG00000027642(gene)|ensembl:ENSMUST00000116380(transcript)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005791"(rough endoplasmic reticulum)|go:"GO:0006487"(protein N-linked glycosylation)|go:"GO:0007568"(aging)|go:"GO:0008250"(oligosaccharyltransferase complex)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016604"(nuclear body)|go:"GO:0042493"|go:"GO:0043022"(ribosome binding)|interpro:IPR008814(Ribophorin II)|mint:Q9DBG6|rcsb pdb:5J6G|rcsb pdb:5J6H|entrezgene/locuslink:20014(identity) - - author-confidence:1.5993745303176077 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:FeAH2GGWVY8J5dSaAvfrsBSx3co10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:P63011 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) - - author-confidence:1.384280076184492 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q8BHC1 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - - author-confidence:1.4380090643123493 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q8VDN2 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-444536|ensembl:ENSMUSP00000039657|uniprotkb:Q91Z09 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:at1a1_mouse(display_long)|uniprotkb:Sodium pump subunit alpha-1(gene name synonym)|uniprotkb:Atp1a1(gene name)|psi-mi:Atp1a1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_659149.1|go:"GO:0016324"(apical plasma membrane)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0016791"(phosphatase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030007"(cellular potassium ion homeostasis)|go:"GO:0030315"(T-tubule)|go:"GO:0030424"(axon)|go:"GO:0030506"(ankyrin binding)|go:"GO:0030955"(potassium ion binding)|go:"GO:0031090"(organelle membrane)|go:"GO:0031402"(sodium ion binding)|go:"GO:0031947"(negative regulation of glucocorticoid biosynthetic process)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036126"(sperm flagellum)|go:"GO:0036376"(sodium ion export across plasma membrane)|go:"GO:0042383"(sarcolemma)|go:"GO:0042470"(melanosome)|go:"GO:0042493"|go:"GO:0043209"(myelin sheath)|go:"GO:0043531"(ADP binding)|go:"GO:0043548"(phosphatidylinositol 3-kinase binding)|go:"GO:0045121"(membrane raft)|go:"GO:0045822"(negative regulation of heart contraction)|go:"GO:0045823"(positive regulation of heart contraction)|go:"GO:0045989"(positive regulation of striated muscle contraction)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051087"(chaperone binding)|go:"GO:0055085"(transmembrane transport)|go:"GO:0060081"(membrane hyperpolarization)|go:"GO:0071260"(cellular response to mechanical stimulus)|go:"GO:0071383"(cellular response to steroid hormone stimulus)|go:"GO:0086004"(regulation of cardiac muscle cell contraction)|go:"GO:0086009"(membrane repolarization)|go:"GO:1902600"(proton transmembrane transport)|go:"GO:1990239"(steroid hormone binding)|go:"GO:1990573"(potassium ion import across plasma membrane)|interpro:IPR001757(ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter)|interpro:IPR004014(ATPase, P-type cation-transporter, N-terminal)|interpro:IPR005775(ATPase, P-type cation exchange, alpha subunit, eukaryotic)|interpro:IPR006068(ATPase, P-type cation-transporter, C-terminal)|interpro:IPR008250(E1-E2 ATPase-associated region)|interpro:IPR018303|interpro:IPR023214|interpro:IPR023298|interpro:IPR023299|interpro:IPR036412|interpro:IPR044492|mint:Q8VDN2|reactome:R-MMU-5578775|reactome:R-MMU-936837|ensembl:ENSMUSG00000033161(gene)|ensembl:ENSMUST00000036493(transcript)|go:"GO:0002026"(regulation of the force of heart contraction)|go:"GO:0002028"(regulation of sodium ion transport)|go:"GO:0005391"("P-type sodium:potassium-exchanging transporter activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005768"(endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0005890"("sodium:potassium-exchanging ATPase complex")|go:"GO:0005901"(caveola)|go:"GO:0006813"(potassium ion transport)|go:"GO:0006814"(sodium ion transport)|go:"GO:0006883"(cellular sodium ion homeostasis)|go:"GO:0008217"(regulation of blood pressure)|go:"GO:0014069"(postsynaptic density)|go:"GO:0014704"(intercalated disc)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016323"(basolateral plasma membrane)|dip:DIP-31885N|entrezgene/locuslink:11928(identity) - - author-confidence:68.25777062184609 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:gz0ThqOMMsrl71IqGW0z8wbiqL410090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q8QZY9 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-6094674|ensembl:ENSMUSP00000075709 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:sf3b4_mouse(display_long)|uniprotkb:Sf3b4(gene name)|psi-mi:Sf3b4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_694693.1|ensembl:ENSMUSG00000068856(gene)|ensembl:ENSMUST00000076372(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0048026"(positive regulation of mRNA splicing, via spliceosome)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:1990935"(splicing factor binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034158|interpro:IPR034159|interpro:IPR035979|mint:Q8QZY9|reactome:R-MMU-72163|reactome:R-MMU-72165|entrezgene/locuslink:107701(identity) - - author-confidence:4.717619359571882 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:eYaqZLWduL1MsiM0jP2BLXuEkBw10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q9EQH3 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-775825|uniprotkb:Q61123|ensembl:ENSMUSP00000034131 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:vps35_mouse(display_long)|uniprotkb:Vesicle protein sorting 35(gene name synonym)|uniprotkb:Maternal-embryonic 3(gene name synonym)|uniprotkb:Vps35(gene name)|psi-mi:Vps35(display_short)|uniprotkb:Mem3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_075373.1|dip:DIP-32210N|ensembl:ENSMUSG00000031696(gene)|ensembl:ENSMUST00000034131(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006624"(vacuolar protein processing)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007040"(lysosome organization)|go:"GO:0007416"(synapse assembly)|go:"GO:0010008"(endosome membrane)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010821"(regulation of mitochondrion organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030904"(retromer complex)|go:"GO:0030906"(retromer, cargo-selective complex)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0031648"(protein destabilization)|go:"GO:0031748"(D1 dopamine receptor binding)|go:"GO:0032268"(regulation of cellular protein metabolic process)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032463"(negative regulation of protein homooligomerization)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043653"(mitochondrial fragmentation involved in apoptotic process)|go:"GO:0045056"(transcytosis)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050882"(voluntary musculoskeletal movement)|go:"GO:0060161"(positive regulation of dopamine receptor signaling pathway)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061357"(positive regulation of Wnt protein secretion)|go:"GO:0090141"(positive regulation of mitochondrial fission)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:0090326"(positive regulation of locomotion involved in locomotory behavior)|go:"GO:0097422"(tubular endosome)|go:"GO:0098793"(presynapse)|go:"GO:0098794"(postsynapse)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099003"(vesicle-mediated transport in synapse)|go:"GO:0099073"(mitochondrion-derived vesicle)|go:"GO:0099074"(mitochondrion to lysosome transport)|go:"GO:0099639"(neurotransmitter receptor transport, endosome to plasma membrane)|go:"GO:1901215"(negative regulation of neuron death)|go:"GO:1902823"(negative regulation of late endosome to lysosome transport)|go:"GO:1902950"(regulation of dendritic spine maintenance)|go:"GO:1903181"(positive regulation of dopamine biosynthetic process)|go:"GO:1903364"(positive regulation of cellular protein catabolic process)|go:"GO:1903828"(negative regulation of protein localization)|go:"GO:1905166"(negative regulation of lysosomal protein catabolic process)|go:"GO:2000331"(regulation of terminal button organization)|interpro:IPR005378(Vacuolar protein sorting-associated protein 35)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR042491|mint:Q9EQH3|rcsb pdb:6VAB|rcsb pdb:6VAC|reactome:R-MMU-3238698|entrezgene/locuslink:65114(identity) - - author-confidence:3.944171832801101 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:dK5TqSajxrGKjiNwRjeZCV519XE10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:P63154 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-9989586|uniprotkb:Q542E8|uniprotkb:Q9CQC1|ensembl:ENSMUSP00000001818 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:crnl1_mouse(display_long)|uniprotkb:Crnkl1(gene name)|psi-mi:Crnkl1(display_short)|uniprotkb:Crooked neck homolog(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_080096.1|ensembl:ENSMUSG00000001767(gene)|ensembl:ENSMUST00000001818(transcript)|go:"GO:0000245"(spliceosomal complex assembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0016607"(nuclear speck)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|reactome:R-MMU-72163|entrezgene/locuslink:66877(identity) - - author-confidence:1.1109940933813383 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:9DgysHExtqmhzmps9wzWd8iF9wo10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q9QZQ1 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-6673595|ensembl:ENSMUSP00000118318 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:afad_mouse(display_long)|uniprotkb:Afdn(gene name)|psi-mi:Afdn(display_short)|uniprotkb:Af6(gene name synonym)|uniprotkb:Afadin adherens junction formation factor(gene name synonym)|uniprotkb:Mllt4(gene name synonym)|uniprotkb:Protein Af-6(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) ensembl:ENSMUSG00000068036(gene)|ensembl:ENSMUST00000139666(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005912"(adherens junction)|go:"GO:0007165"(signal transduction)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016607"(nuclear speck)|go:"GO:0021537"(telencephalon development)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0090557"(establishment of endothelial intestinal barrier)|go:"GO:0140059"(dendrite arborization)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050839"(cell adhesion molecule binding)|go:"GO:0051015"(actin filament binding)|go:"GO:1902414"(protein localization to cell junction)|go:"GO:1903861"(positive regulation of dendrite extension)|go:"GO:2000049"(positive regulation of cell-cell adhesion mediated by cadherin)|interpro:IPR000159(Ras-association)|interpro:IPR000253(Forkhead-associated)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR002710(Dilute)|interpro:IPR008984(SMAD/FHA domain)|interpro:IPR029071|go:"GO:0060019"(radial glial cell differentiation)|go:"GO:0060563"(neuroepithelial cell differentiation)|go:"GO:0061003"(positive regulation of dendritic spine morphogenesis)|go:"GO:0061885"(positive regulation of mini excitatory postsynaptic potential)|go:"GO:0061951"(establishment of protein localization to plasma membrane)|go:"GO:0070160"(tight junction)|go:"GO:0070445"(regulation of oligodendrocyte progenitor proliferation)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0030054"(cell junction)|go:"GO:0030274"(LIM domain binding)|go:"GO:0030336"(negative regulation of cell migration)|go:"GO:0030424"(axon)|go:"GO:0031267"(small GTPase binding)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0034334"(adherens junction maintenance)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0043296"(apical junction complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0044291"(cell-cell contact zone)|go:"GO:0044331"(cell-cell adhesion mediated by cadherin)|go:"GO:0045177"(apical part of cell)|go:"GO:0046930"(pore complex)|go:"GO:0046931"(pore complex assembly)|go:"GO:0048854"(brain morphogenesis)|go:"GO:0048872"(homeostasis of number of cells)|go:"GO:0022409"(positive regulation of cell-cell adhesion)|interpro:IPR036034|interpro:IPR037977|rcsb pdb:1WLN|rcsb pdb:1WXA|rcsb pdb:3AXA|rcsb pdb:6AMB|reactome:R-MMU-418990|refseq:NP_034936.1|dip:DIP-60737N|entrezgene/locuslink:17356(identity) - - author-confidence:42.28025111608139 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:gzoTHL3iU/HoLVKFDiPQjJ6cSxk10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:P25799 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-643958|uniprotkb:B2RRQ6|uniprotkb:Q3TZE8|uniprotkb:Q3V2V6|uniprotkb:Q6TDG8|uniprotkb:Q75ZL1|uniprotkb:Q80Y21|uniprotkb:Q8C712|ensembl:ENSMUSP00000029812|ensembl:ENSMUSP00000128345 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:nfkb1_mouse(display_long)|uniprotkb:DNA-binding factor KBF1(gene name synonym)|uniprotkb:EBP-1(gene name synonym)|uniprotkb:NF-kappa-B1 p84/NF-kappa-B1 p98(gene name synonym)|uniprotkb:Nfkb1(gene name)|psi-mi:Nfkb1(display_short)|uniprotkb:Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_032715.2|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048535"(lymph node development)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071260"(cellular response to mechanical stimulus)|go:"GO:0071316"(cellular response to nicotine)|go:"GO:0071322"(cellular response to carbohydrate stimulus)|go:"GO:0071345"(cellular response to cytokine stimulus)|go:"GO:0071347"(cellular response to interleukin-1)|go:"GO:0071354"(cellular response to interleukin-6)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071359"(cellular response to dsRNA)|go:"GO:0071407"(cellular response to organic cyclic compound)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:1900127"(positive regulation of hyaluronan biosynthetic process)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|rcsb pdb:1U3Y|rcsb pdb:1U3Z|rcsb pdb:1U41|rcsb pdb:1U42|rcsb pdb:1VKX|rcsb pdb:2I9T|rcsb pdb:2V2T|rcsb pdb:3JV4|reactome:R-MMU-1169091|reactome:R-MMU-1810476|reactome:R-MMU-193692|reactome:R-MMU-202424|reactome:R-MMU-209560|reactome:R-MMU-2871837|reactome:R-MMU-3134963|reactome:R-MMU-3214841|reactome:R-MMU-445989|reactome:R-MMU-448706|reactome:R-MMU-5607764|reactome:R-MMU-5621575|rcsb pdb:1U3J|reactome:R-MMU-5684264|reactome:R-MMU-6798695|ensembl:ENSMUSG00000028163(gene)|ensembl:ENSMUST00000029812(transcript)|ensembl:ENSMUST00000164430(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001223"(transcription coactivator binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001818"(negative regulation of cytokine production)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006915"(apoptotic process)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0007165"(signal transduction)|refseq:XP_006501169.1|go:"GO:1902895"(positive regulation of miRNA transcription)|go:"GO:1904385"(cellular response to angiotensin)|go:"GO:1904630"(cellular response to diterpene)|go:"GO:1904632"(cellular response to glucoside)|go:"GO:1990416"(cellular response to brain-derived neurotrophic factor stimulus)|go:"GO:2000630"(positive regulation of miRNA metabolic process)|go:"GO:2000637"(positive regulation of gene silencing by miRNA)|interpro:IPR000451(NF-kappa-B/Rel/dorsal)|interpro:IPR000488(Death)|interpro:IPR002110(Ankyrin)|interpro:IPR002909(Cell surface receptor IPT/TIG)|interpro:IPR008967(p53-like transcription factor, DNA-binding)|interpro:IPR011029(DEATH-like)|interpro:IPR011539(Rel homology)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR020683|interpro:IPR030492|interpro:IPR030503|interpro:IPR032397|interpro:IPR033926|interpro:IPR036770|interpro:IPR037059|mint:P25799|rcsb pdb:1BFS|rcsb pdb:1IKN|rcsb pdb:1LE5|rcsb pdb:1LE9|go:"GO:1901653"(cellular response to peptide)|rcsb pdb:1LEI|rcsb pdb:1NFK|rcsb pdb:1OOA|rcsb pdb:1U36|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010956"(negative regulation of calcidiol 1-monooxygenase activity)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0019899"(enzyme binding)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0032695"(negative regulation of interleukin-12 production)|go:"GO:0032991"(protein-containing complex)|go:"GO:0035994"(response to muscle stretch)|go:"GO:0042802"(identical protein binding)|go:"GO:0042805"(actinin binding)|go:"GO:0043005"(neuron projection)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0010628"(positive regulation of gene expression)|reactome:R-MMU-933542|reactome:R-MMU-9020702|dip:DIP-85N|entrezgene/locuslink:18033(identity) - - author-confidence:3.1710813092736947 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:OiCZGnyznh4scSRI6QeIuv4pHbA10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q99P72 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-3869532|uniprotkb:Q8BHF5|uniprotkb:Q78NS1|uniprotkb:Q8BH78|uniprotkb:Q5DTK9|uniprotkb:Q7TNB7|uniprotkb:Q80W95|uniprotkb:Q8BGK7|uniprotkb:Q8BGM9|uniprotkb:Q8K290|uniprotkb:Q8K3G8|uniprotkb:Q9CTE3|ensembl:ENSMUSP00000099907 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:rtn4_mouse(display_long)|uniprotkb:Rtn4(gene name)|psi-mi:Rtn4(display_short)|uniprotkb:Kiaa0886(gene name synonym)|uniprotkb:Nogo(gene name synonym)|uniprotkb:Neurite outgrowth inhibitor(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_077188.1|refseq:NP_918940.1|refseq:NP_918943.1|dip:DIP-41976N|ensembl:ENSMUSG00000020458(gene)|ensembl:ENSMUST00000102843(transcript)|go:"GO:0001825"(blastocyst formation)|go:"GO:0002523"(leukocyte migration involved in inflammatory response)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0007029"(endoplasmic reticulum organization)|go:"GO:0007399"(nervous system development)|go:"GO:0007413"(axonal fasciculation)|go:"GO:0010634"(positive regulation of epithelial cell migration)|go:"GO:0010977"(negative regulation of neuron projection development)|go:"GO:0014069"(postsynaptic density)|go:"GO:0021801"(cerebral cortex radial glia-guided migration)|go:"GO:0022009"(central nervous system vasculogenesis)|go:"GO:0030054"(cell junction)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0030334"(regulation of cell migration)|go:"GO:0030517"(negative regulation of axon extension)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033601"(positive regulation of mammary gland epithelial cell proliferation)|go:"GO:0033603"(positive regulation of dopamine secretion)|go:"GO:0034165"(positive regulation of toll-like receptor 9 signaling pathway)|go:"GO:0035022"(positive regulation of Rac protein signal transduction)|go:"GO:0035441"(cell migration involved in vasculogenesis)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042995"(cell projection)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043209"(myelin sheath)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0045665"(negative regulation of neuron differentiation)|go:"GO:0045687"(positive regulation of glial cell differentiation)|go:"GO:0045766"(positive regulation of angiogenesis)|go:"GO:0050771"(negative regulation of axonogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0051292"(nuclear pore complex assembly)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0051930"(regulation of sensory perception of pain)|go:"GO:0051960"(regulation of nervous system development)|go:"GO:0060317"(cardiac epithelial to mesenchymal transition)|go:"GO:0060907"(positive regulation of macrophage cytokine production)|go:"GO:0061462"(protein localization to lysosome)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0070571"(negative regulation of neuron projection regeneration)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0071787"(endoplasmic reticulum tubular network formation)|go:"GO:0090156"(cellular sphingolipid homeostasis)|go:"GO:0098826"(endoplasmic reticulum tubular network membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099061"(integral component of postsynaptic density membrane)|go:"GO:0120078"(cell adhesion involved in sprouting angiogenesis)|go:"GO:1902430"(negative regulation of amyloid-beta formation)|go:"GO:1902624"(positive regulation of neutrophil migration)|go:"GO:1905523"(positive regulation of macrophage migration)|go:"GO:1905552"(positive regulation of protein localization to endoplasmic reticulum)|go:"GO:1905580"(positive regulation of ERBB3 signaling pathway)|go:"GO:1905653"(positive regulation of artery morphogenesis)|go:"GO:1990809"(endoplasmic reticulum tubular network membrane organization)|go:"GO:2000172"(regulation of branching morphogenesis of a nerve)|go:"GO:2000347"(positive regulation of hepatocyte proliferation)|go:"GO:2001213"(negative regulation of vasculogenesis)|interpro:IPR003388(Reticulon)|mint:Q99P72|rcsb pdb:2KO2|reactome:R-MMU-193634|refseq:NP_918941.1|refseq:NP_918942.1|entrezgene/locuslink:68585(identity) - - author-confidence:5.478750274446243 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:+hmGWVeJPIbs6/SavXBsKK22Nqw10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q8R326 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-309927|uniprotkb:Q3TUK2|uniprotkb:Q9CYH1|uniprotkb:Q9D0M8|ensembl:ENSMUSP00000022507 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:pspc1_mouse(display_long)|uniprotkb:Pspc1(gene name)|psi-mi:Pspc1(display_short)|uniprotkb:Psp1(gene name synonym)|uniprotkb:Paraspeckle protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_079958.3|ensembl:ENSMUSG00000021938(gene)|ensembl:ENSMUST00000022507(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001650"(fibrillar center)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0042382"(paraspeckles)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0045087"(innate immune response)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0048511"(rhythmic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012975(NOPS)|interpro:IPR034522|interpro:IPR034523|interpro:IPR035979|mint:Q8R326|entrezgene/locuslink:66645(identity) - - author-confidence:2.349973849512423 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:ytx7HwtwAo7SxG0MsNz1YR1dKiQ10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:O35129 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-445002|uniprotkb:O89075|uniprotkb:Q61336|ensembl:ENSMUSP00000004375 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:phb2_mouse(display_long)|uniprotkb:B-cell receptor-associated protein BAP37(gene name synonym)|uniprotkb:Repressor of estrogen receptor activity(gene name synonym)|uniprotkb:Phb2(gene name)|psi-mi:Phb2(display_short)|uniprotkb:Bap(gene name synonym)|uniprotkb:Bcap37(gene name synonym)|uniprotkb:Rea(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_031557.2|go:"GO:0046625"(sphingolipid binding)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0050821"(protein stabilization)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0060744"(mammary gland branching involved in thelarche)|go:"GO:0060749"(mammary gland alveolus development)|go:"GO:0060762"(regulation of branching involved in mammary gland duct morphogenesis)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0071300"(cellular response to retinoic acid)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071944"(cell periphery)|go:"GO:0098800"(inner mitochondrial membrane protein complex)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0140374"(antiviral innate immune response)|go:"GO:1900208"(regulation of cardiolipin metabolic process)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1904959"(regulation of cytochrome-c oxidase activity)|go:"GO:1990051"(activation of protein kinase C activity)|interpro:IPR000163(Prohibitin)|interpro:IPR001107(Band 7 protein)|interpro:IPR036013|mint:O35129|reactome:R-MMU-8949664|go:"GO:1902808"(positive regulation of cell cycle G1/S phase transition)|ensembl:ENSMUSG00000004264(gene)|ensembl:ENSMUST00000004375(transcript)|go:"GO:0000423"(mitophagy)|go:"GO:0002639"(positive regulation of immunoglobulin production)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0007202"(activation of phospholipase C activity)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009611"(response to wounding)|go:"GO:0009986"(cell surface)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016363"(nuclear matrix)|go:"GO:0023035"(CD40 signaling pathway)|go:"GO:0030424"(axon)|go:"GO:0031536"(positive regulation of exit from mitosis)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0033218"(amide binding)|go:"GO:0033600"(negative regulation of mammary gland epithelial cell proliferation)|go:"GO:0035632"(mitochondrial prohibitin complex)|go:"GO:0039520"(induction by virus of host autophagy)|go:"GO:0039529"(RIG-I signaling pathway)|go:"GO:0042113"(B cell activation)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0016477"(cell migration)|entrezgene/locuslink:12034(identity) - - author-confidence:59.205953386086506 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:h4pib54mBeQgOKCe/hib58LM26w10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:P17751 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-444877|uniprotkb:Q3TJH2|uniprotkb:Q3UC04|uniprotkb:Q3UKG9|uniprotkb:Q64513|uniprotkb:Q9CVF9|uniprotkb:Q9CWE7|ensembl:ENSMUSP00000130858 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:tpis_mouse(display_long)|uniprotkb:Triose-phosphate isomerase(gene name synonym)|uniprotkb:Tpi1(gene name)|psi-mi:Tpi1(display_short)|uniprotkb:Tpi(gene name synonym)|uniprotkb:Methylglyoxal synthase(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_033441.2|ensembl:ENSMUSG00000023456(gene)|ensembl:ENSMUST00000172132(transcript)|go:"GO:0004807"(triose-phosphate isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006006"(glucose metabolic process)|go:"GO:0006094"(gluconeogenesis)|go:"GO:0006096"(glycolytic process)|go:"GO:0008929"(methylglyoxal synthase activity)|go:"GO:0016853"(isomerase activity)|go:"GO:0019242"(methylglyoxal biosynthetic process)|go:"GO:0019563"(glycerol catabolic process)|go:"GO:0019682"(glyceraldehyde-3-phosphate metabolic process)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0046166"(glyceraldehyde-3-phosphate biosynthetic process)|interpro:IPR000652(Triosephosphate isomerase)|interpro:IPR013785(Aldolase-type TIM barrel)|interpro:IPR020861|interpro:IPR022896|interpro:IPR035990|mint:P17751|reactome:R-MMU-70171|reactome:R-MMU-70263|entrezgene/locuslink:21991(identity) - - author-confidence:5.478750274446243 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:1+uasFpsjnuX50Ti23iaIawdp7k10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:P57784 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-6877081|ensembl:ENSMUSP00000117947|uniprotkb:Q3U7R8|uniprotkb:Q8K2W4|uniprotkb:Q91YW1|uniprotkb:Q9JKQ3 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:ru2a_mouse(display_long)|uniprotkb:Snrpa1(gene name)|psi-mi:Snrpa1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) ensembl:ENSMUSG00000030512(gene)|ensembl:ENSMUST00000153609(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005686"(U2 snRNP)|go:"GO:0007283"(spermatogenesis)|go:"GO:0016604"(nuclear body)|go:"GO:0016607"(nuclear speck)|go:"GO:0030620"(U2 snRNA binding)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR003603(U2A'/phosphoprotein 32 family A, C-terminal)|interpro:IPR032675|interpro:IPR044640|mint:P57784|reactome:R-MMU-72163|refseq:NP_067311.4|entrezgene/locuslink:68981(identity) - - author-confidence:1.3469732372518604 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:AMQnbw028+3/guP4MfrfDJCFu6s10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q3V3R1 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-912208|uniprotkb:Q3TVQ0|uniprotkb:Q3V402|uniprotkb:Q8CAL0|uniprotkb:Q8K2N5|uniprotkb:Q80V98|ensembl:ENSMUSP00000036178|ensembl:ENSMUSP00000112870|ensembl:ENSMUSP00000112897 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:c1tm_mouse(display_long)|uniprotkb:Formyltetrahydrofolate synthetase(gene name synonym)|uniprotkb:Mthfd1l(gene name)|psi-mi:Mthfd1l(display_short)|uniprotkb:Fthfsdc1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_001164256.1|refseq:NP_001164257.1|refseq:NP_758512.3|ensembl:ENSMUSG00000040675(gene)|ensembl:ENSMUST00000043735(transcript)|ensembl:ENSMUST00000117291(transcript)|ensembl:ENSMUST00000120585(transcript)|go:"GO:0001843"(neural tube closure)|go:"GO:0004329"(formate-tetrahydrofolate ligase activity)|go:"GO:0004488"("methylenetetrahydrofolate dehydrogenase (NADP+) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006760"(folic acid-containing compound metabolic process)|go:"GO:0009257"(10-formyltetrahydrofolate biosynthetic process)|go:"GO:0015942"(formate metabolic process)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048702"(embryonic neurocranium morphogenesis)|go:"GO:0048703"(embryonic viscerocranium morphogenesis)|interpro:IPR000559(Formate-tetrahydrofolate ligase, FTHFS)|interpro:IPR000672(Tetrahydrofolate dehydrogenase/cyclohydrolase)|interpro:IPR020628|interpro:IPR020630|interpro:IPR020631|interpro:IPR027417|interpro:IPR036291|mint:Q3V3R1|rcsb pdb:2EO2|reactome:R-MMU-196757|entrezgene/locuslink:270685(identity) - - author-confidence:4.511806989766502 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:Hh58kyg8+iN4T2flIZSrUkUf1MI10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:P07901 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-78930|ensembl:ENSMUSP00000021698|ensembl:ENSMUSP00000091921 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:hs90a_mouse(display_long)|uniprotkb:Hsp90aa1(gene name)|psi-mi:Hsp90aa1(display_short)|uniprotkb:Hsp86(gene name synonym)|uniprotkb:Hsp86-1(gene name synonym)|uniprotkb:Hspca(gene name synonym)|uniprotkb:Heat shock 86 kDa(gene name synonym)|uniprotkb:Tumor-specific transplantation 86 kDa antigen(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_034610.1|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045585"(positive regulation of cytotoxic T cell differentiation)|go:"GO:0045793"(positive regulation of cell size)|go:"GO:0046677"(response to antibiotic)|go:"GO:0048156"(tau protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048675"(axon extension)|go:"GO:0050821"(protein stabilization)|go:"GO:0051020"(GTPase binding)|go:"GO:0051022"(Rho GDP-dissociation inhibitor binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070182"(DNA polymerase binding)|go:"GO:0097110"(scaffold protein binding)|go:"GO:0097226"(sperm mitochondrial sheath)|go:"GO:0097524"(sperm plasma membrane)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0098586"(cellular response to virus)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902949"(positive regulation of tau-protein kinase activity)|go:"GO:1903364"(positive regulation of cellular protein catabolic process)|go:"GO:1903827"|go:"GO:1905323"(telomerase holoenzyme complex assembly)|go:"GO:1990782"(protein tyrosine kinase binding)|interpro:IPR001404(Heat shock protein Hsp90)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR019805|interpro:IPR020568|interpro:IPR020575|interpro:IPR036890|interpro:IPR037196|mint:P07901|rcsb pdb:5H22|reactome:R-MMU-1227986|reactome:R-MMU-1474151|reactome:R-MMU-168928|reactome:R-MMU-2029482|reactome:R-MMU-203615|reactome:R-MMU-2565942|reactome:R-MMU-3371497|reactome:R-MMU-3371511|reactome:R-MMU-3371568|reactome:R-MMU-3371571|reactome:R-MMU-380259|reactome:R-MMU-380270|reactome:R-MMU-380284|reactome:R-MMU-380320|reactome:R-MMU-399954|reactome:R-MMU-4420097|reactome:R-MMU-5218920|reactome:R-MMU-5620912|reactome:R-MMU-5675482|reactome:R-MMU-6798695|reactome:R-MMU-8852276|reactome:R-MMU-8854518|reactome:R-MMU-8863795|reactome:R-MMU-8939211|reactome:R-MMU-9009391|reactome:R-MMU-9013418|reactome:R-MMU-9018519|reactome:R-MMU-9652282|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031526"(brush border membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032273"(positive regulation of protein polymerization)|go:"GO:0032564"(dATP binding)|go:"GO:0032728"(positive regulation of interferon-beta production)|ensembl:ENSMUSG00000021270(gene)|ensembl:ENSMUST00000021698(transcript)|ensembl:ENSMUST00000094361(transcript)|go:"GO:0001764"(neuron migration)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0002134"(UTP binding)|go:"GO:0002135"(CTP binding)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0002230"(positive regulation of defense response to virus by host)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006809"(nitric oxide biosynthetic process)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0007004"(telomere maintenance via telomerase)|go:"GO:0009408"(response to heat)|go:"GO:0009409"(response to cold)|go:"GO:0009986"(cell surface)|go:"GO:0010592"(positive regulation of lamellipodium assembly)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017098"(sulfonylurea receptor binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0021955"(central nervous system neuron axonogenesis)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030235"(nitric-oxide synthase regulator activity)|go:"GO:0030911"(TPR domain binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034605"(cellular response to heat)|go:"GO:0036126"(sperm flagellum)|go:"GO:0042026"(protein refolding)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0042470"(melanosome)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043209"(myelin sheath)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0044294"(dendritic growth cone)|go:"GO:0044295"(axonal growth cone)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045040"(protein insertion into mitochondrial outer membrane)|dip:DIP-30975N|entrezgene/locuslink:15519(identity) - - author-confidence:1.2380872480226481 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:t9XAeXdXezYOtJX0wp3IY9/ZMkQ10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:P67778 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-298507|uniprotkb:P24142|uniprotkb:Q3UB75|uniprotkb:Q5SQG4|ensembl:ENSMUSP00000119603 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:phb_mouse(display_long)|uniprotkb:Phb(gene name)|psi-mi:Phb(display_short)|uniprotkb:B-cell receptor-associated protein 32(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) ensembl:ENSMUSG00000038845(gene)|ensembl:ENSMUST00000125172(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001541"(ovarian follicle development)|go:"GO:0001552"(ovarian follicle atresia)|go:"GO:0001850"(complement component C3a binding)|go:"GO:0001851"(complement component C3b binding)|go:"GO:0002639"(positive regulation of immunoglobulin production)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007202"(activation of phospholipase C activity)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009986"(cell surface)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0010944"(negative regulation of transcription by competitive promoter binding)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016575"(histone deacetylation)|go:"GO:0019899"(enzyme binding)|go:"GO:0023035"(CD40 signaling pathway)|go:"GO:0030061"(mitochondrial crista)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0031100"(animal organ regeneration)|go:"GO:0031315"(extrinsic component of mitochondrial outer membrane)|go:"GO:0031871"(proteinase activated receptor binding)|go:"GO:0032740"(positive regulation of interleukin-17 production)|go:"GO:0035632"(mitochondrial prohibitin complex)|go:"GO:0035902"(response to immobilization stress)|go:"GO:0042113"(B cell activation)|go:"GO:0042177"(negative regulation of protein catabolic process)|go:"GO:0042493"|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0039529"(RIG-I signaling pathway)|go:"GO:0044830"(modulation by host of viral RNA genome replication)|go:"GO:0045471"(response to ethanol)|go:"GO:0045745"(positive regulation of G protein-coupled receptor signaling pathway)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045917"(positive regulation of complement activation)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0050821"(protein stabilization)|go:"GO:0050847"(progesterone receptor signaling pathway)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0060766"(negative regulation of androgen receptor signaling pathway)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0071354"(cellular response to interleukin-6)|go:"GO:0071897"(DNA biosynthetic process)|go:"GO:0072538"(T-helper 17 type immune response)|go:"GO:0098891"(extrinsic component of presynaptic active zone membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0140374"(antiviral innate immune response)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1990051"(activation of protein kinase C activity)|go:"GO:2000323"(negative regulation of glucocorticoid receptor signaling pathway)|interpro:IPR000163(Prohibitin)|interpro:IPR001107(Band 7 protein)|interpro:IPR036013|mint:P67778|reactome:R-MMU-5673000|reactome:R-MMU-8949664|refseq:NP_032857.1|entrezgene/locuslink:18673(identity) - - author-confidence:65.69091730198369 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:eUStcZ9Mu7+7MHr/GJXFwwJY/Fc10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:O88342 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-6914976|ensembl:ENSMUSP00000005234 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:wdr1_mouse(display_long)|uniprotkb:Wdr1(gene name)|psi-mi:Wdr1(display_short)|uniprotkb:Actin-interacting protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) go:"GO:0045199"(maintenance of epithelial cell apical/basal polarity)|go:"GO:0045214"(sarcomere organization)|go:"GO:0048713"(regulation of oligodendrocyte differentiation)|go:"GO:0051015"(actin filament binding)|go:"GO:0060307"(regulation of ventricular cardiac muscle cell membrane repolarization)|go:"GO:1990266"(neutrophil migration)|interpro:IPR001680(WD40 repeat)|interpro:IPR011045(Nitrous oxide reductase, N-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|reactome:R-MMU-114608|ensembl:ENSMUSG00000005103(gene)|ensembl:ENSMUST00000005234(transcript)|go:"GO:0002102"(podosome)|go:"GO:0002446"(neutrophil mediated immunity)|go:"GO:0003779"(actin binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030042"(actin filament depolymerization)|go:"GO:0030043"(actin filament fragmentation)|go:"GO:0030054"(cell junction)|go:"GO:0030220"(platelet formation)|go:"GO:0030834"(regulation of actin filament depolymerization)|go:"GO:0030836"(positive regulation of actin filament depolymerization)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0030865"(cortical cytoskeleton organization)|go:"GO:0040011"(locomotion)|go:"GO:0042247"(establishment of planar polarity of follicular epithelium)|go:"GO:0042995"(cell projection)|go:"GO:0043209"(myelin sheath)|go:"GO:0043297"(apical junction assembly)|refseq:NP_035845.1|entrezgene/locuslink:22388(identity) - - author-confidence:1.2659335010058566 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:PVIlQDv8eXQrI3QBWJOjKlj/Zig10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q8R081 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-647483|uniprotkb:O54789|uniprotkb:Q8K0S7|uniprotkb:Q499X2|ensembl:ENSMUSP00000049407|ensembl:ENSMUSP00000133728 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:hnrpl_mouse(display_long)|uniprotkb:Hnrpl(gene name synonym)|uniprotkb:Hnrnpl(gene name)|psi-mi:Hnrnpl(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_796275.3|refseq:XP_006539621.1|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034816|interpro:IPR034817|interpro:IPR035005|interpro:IPR035008|interpro:IPR035979|mint:Q8R081|rcsb pdb:3S01|rcsb pdb:3TYT|reactome:R-MMU-72163|reactome:R-MMU-72203|go:"GO:1990715"(mRNA CDS binding)|ensembl:ENSMUSG00000015165(gene)|ensembl:ENSMUST00000038572(transcript)|ensembl:ENSMUST00000174548(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035770"(ribonucleoprotein granule)|go:"GO:0043484"(regulation of RNA splicing)|go:"GO:0045120"(pronucleus)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0048025"(negative regulation of mRNA splicing, via spliceosome)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0097157"(pre-mRNA intronic binding)|go:"GO:1902416"(positive regulation of mRNA binding)|entrezgene/locuslink:15388(identity) - - author-confidence:1.4953080848739508 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:BApt4fekoyJ285Ve13kxstcLbV010090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:P24526 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-11570035|uniprotkb:Q4KL10|ensembl:ENSMUSP00000029034 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:myp2_mouse(display_long)|uniprotkb:Pmp2(gene name)|psi-mi:Pmp2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_001025476.1|go:"GO:0005504"(fatty acid binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0015485"(cholesterol binding)|go:"GO:0043209"(myelin sheath)|go:"GO:0061024"(membrane organization)|interpro:IPR000463(Cytosolic fatty-acid binding)|interpro:IPR000566(Lipocalin-related protein and Bos/Can/Equ allergen)|interpro:IPR012674(Calycin)|interpro:IPR031256|interpro:IPR031259|ensembl:ENSMUSG00000052468(gene)|ensembl:ENSMUST00000029034(transcript)|entrezgene/locuslink:18857(identity) - - author-confidence:18.668056599294204 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:lsCqozu8EItsQzyho3Jgh6a0Jq410090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q91ZR1 uniprotkb:Q9QXD8 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-1565949|uniprotkb:Q8C8G4|uniprotkb:Q9CW55|ensembl:ENSMUSP00000026269 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:limd1_mouse(display_long)|uniprotkb:Limd1(gene name)|psi-mi:Limd1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570033|imex:IM-24977-41 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_038888.2|dip:DIP-38453N|ensembl:ENSMUSG00000025239(gene)|ensembl:ENSMUST00000026269(transcript)|go:"GO:0000932"(P-body)|go:"GO:0001666"(response to hypoxia)|go:"GO:0002076"(osteoblast development)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005912"(adherens junction)|go:"GO:0005925"(focal adhesion)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0016310"(phosphorylation)|go:"GO:0016442"(RISC complex)|go:"GO:0016477"(cell migration)|go:"GO:0033962"(P-body assembly)|go:"GO:0035195"(gene silencing by miRNA)|go:"GO:0035331"(negative regulation of hippo signaling)|go:"GO:0045668"(negative regulation of osteoblast differentiation)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:2000637"(positive regulation of gene silencing by miRNA)|interpro:IPR001781(Zinc finger, LIM-type)|interpro:IPR028734|mint:Q9QXD8|reactome:R-MMU-1234176|entrezgene/locuslink:29806(identity) - - author-confidence:2.6137992463661535 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2020/10/21 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:l5HpR5SwbKwqzy6a/WUkwnKVkck10090 intact-crc:5686835FDDE91AA2|rigid:u6bCBX1uFza7JcsSobiGLe8SpWQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BSY0 uniprotkb:Q91V41 intact:EBI-8366490|uniprotkb:Q9EQ64|intact:MINT-4112262|uniprotkb:Q9EPA6|uniprotkb:Q6P8S1|ensembl:ENSMUSP00000077273 intact:EBI-3869482|ensembl:ENSMUSP00000028238 psi-mi:asph_mouse(display_long)|uniprotkb:Asph(gene name)|psi-mi:Asph(display_short)|uniprotkb:Aspartate beta-hydroxylase(gene name synonym)|uniprotkb:Peptide-aspartate beta-dioxygenase(gene name synonym)|uniprotkb:Bah(gene name synonym) psi-mi:rab14_mouse(display_long)|uniprotkb:Rab14(gene name)|psi-mi:Rab14(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570020|imex:IM-24977-40 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001171327.1|refseq:NP_001171323.1|refseq:NP_001171326.1|refseq:NP_001171325.1|refseq:NP_001171321.1|refseq:NP_075553.2|refseq:NP_001171324.1|refseq:NP_001277296.1|ensembl:ENSMUSG00000028207(gene)|ensembl:ENSMUST00000078139(transcript)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005886"(plasma membrane)|go:"GO:0007389"(pattern specification process)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010524"(positive regulation of calcium ion transport into cytosol)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0031585"(regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0032237"(activation of store-operated calcium channel activity)|go:"GO:0032541"(cortical endoplasmic reticulum)|go:"GO:0033017"(sarcoplasmic reticulum membrane)|go:"GO:0033198"(response to ATP)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0042264"(peptidyl-aspartic acid hydroxylation)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051480"(regulation of cytosolic calcium ion concentration)|go:"GO:0055074"(calcium ion homeostasis)|go:"GO:0060021"(roof of mouth development)|go:"GO:0060325"(face morphogenesis)|go:"GO:0062101"(peptidyl-aspartic acid 3-dioxygenase activity)|go:"GO:0070588"(calcium ion transmembrane transport)|go:"GO:0071277"(cellular response to calcium ion)|go:"GO:0090316"(positive regulation of intracellular protein transport)|go:"GO:0097202"(activation of cysteine-type endopeptidase activity)|go:"GO:1901879"(regulation of protein depolymerization)|interpro:IPR007803(Aspartyl/Asparaginyl beta-hydroxylase)|interpro:IPR007943(Aspartyl beta-hydroxylase, N-terminal)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR027443|interpro:IPR039038|mint:Q8BSY0|reactome:R-MMU-2672351|reactome:R-MMU-5578775|go:"GO:0045862"(positive regulation of proteolysis)|entrezgene/locuslink:65973(identity) refseq:NP_080973.1|ensembl:ENSMUST00000028238(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005791"(rough endoplasmic reticulum)|go:"GO:0005795"(Golgi stack)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006895"(Golgi to endosome transport)|go:"GO:0007589"(body fluid secretion)|go:"GO:0008543"(fibroblast growth factor receptor signaling pathway)|go:"GO:0012505"(endomembrane system)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0030133"(transport vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031901"(early endosome membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0042175"(nuclear outer membrane-endoplasmic reticulum membrane network)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045176"(apical protein localization)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045995"(regulation of embryonic development)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0090387"(phagolysosome assembly involved in apoptotic cell clearance)|go:"GO:0097208"(alveolar lamellar body)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030702|mint:Q91V41|reactome:R-MMU-1660499|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|ensembl:ENSMUSG00000026878(gene)|entrezgene/locuslink:68365(identity) - comment:mint|function:"Specifically hydroxylates an Asp or Asn residue in certain epidermal growth factor-like (EGF) domains of a number of proteins"|author-confidence:1.7552064460505623 - figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:x06lMmMmxgaETSn5iGJ/1hScfSI10090 rogid:qFP8UXDCPt/RcLTWlZLaitH2LF410090 intact-crc:C38A8CF6348CCE99|rigid:76RgBayt5FDA/mst7iJ08qg2QCs false - tandem tag:n-n - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q921E2 uniprotkb:Q9JHJ3 intact:EBI-8399593|uniprotkb:Q8BKP0|intact:MINT-4122479 intact:EBI-8361332|uniprotkb:Q3UBV7|uniprotkb:Q3TUF5|intact:MINT-4129658|uniprotkb:Q8C6H7|ensembl:ENSMUSP00000135398 psi-mi:rab31_mouse(display_long)|uniprotkb:Rab31(gene name)|psi-mi:Rab31(display_short) psi-mi:glmp_mouse(display_long)|uniprotkb:Glmp(gene name)|psi-mi:Glmp(display_short)|uniprotkb:Lysosomal protein NCU-G1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570214|imex:IM-24977-42 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027417|refseq:NP_598446.2|mint:Q921E2|go:"GO:0001891"(phagocytic cup)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005769"(early endosome)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0031623"(receptor internalization)|go:"GO:0032588"(trans-Golgi network membrane)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048193"(Golgi vesicle transport)|go:"GO:0060100"(positive regulation of phagocytosis, engulfment)|go:"GO:0090382"(phagosome maturation)|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0036186"(early phagosome membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|entrezgene/locuslink:106572(identity) refseq:NP_064387.1|ensembl:ENSMUSG00000001418(gene)|ensembl:ENSMUST00000177005(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005764"(lysosome)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005829"(cytosol)|go:"GO:0016021"(integral component of membrane)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050821"(protein stabilization)|go:"GO:0061462"(protein localization to lysosome)|interpro:IPR029382|mint:Q9JHJ3|rcsb pdb:6NYQ|entrezgene/locuslink:56700(identity) - comment:mint comment:mint|function:Does not seem to be involved in inflammatory regulation|author-confidence:1.033524389569079 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:DvaqDDmQHiSOMl40jbS/w3BOwnc10090 rogid:xjwKbxHO8TtC2Yw+D5Pf03YGD5810090 intact-crc:340E7DA6BE50F6D1|rigid:mRSwkM5OTqKCppRKwwZkQuqzwWY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q921E2 uniprotkb:Q9Z179 intact:EBI-8399593|uniprotkb:Q8BKP0|intact:MINT-4122479 intact:EBI-644352|uniprotkb:Q3UED9|uniprotkb:Q3UMD9|ensembl:ENSMUSP00000022945 psi-mi:rab31_mouse(display_long)|uniprotkb:Rab31(gene name)|psi-mi:Rab31(display_short) psi-mi:shcbp_mouse(display_long)|uniprotkb:Protein expressed in activated lymphocytes(gene name synonym)|uniprotkb:SHC-binding protein(gene name synonym)|uniprotkb:Shcbp1(gene name)|psi-mi:Shcbp1(display_short)|uniprotkb:Pal(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570214|imex:IM-24977-42 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027417|refseq:NP_598446.2|mint:Q921E2|go:"GO:0001891"(phagocytic cup)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005769"(early endosome)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0031623"(receptor internalization)|go:"GO:0032588"(trans-Golgi network membrane)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048193"(Golgi vesicle transport)|go:"GO:0060100"(positive regulation of phagocytosis, engulfment)|go:"GO:0090382"(phagosome maturation)|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0036186"(early phagosome membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|entrezgene/locuslink:106572(identity) refseq:NP_035499.1|ensembl:ENSMUSG00000022322(gene)|ensembl:ENSMUST00000022945(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005819"(spindle)|go:"GO:0008543"(fibroblast growth factor receptor signaling pathway)|go:"GO:0030496"(midbody)|go:"GO:0042169"(SH2 domain binding)|go:"GO:2000177"(regulation of neural precursor cell proliferation)|interpro:IPR006626(Parallel beta-helix repeat)|interpro:IPR011050(Pectin lyase fold/virulence factor)|interpro:IPR012334(Pectin lyase fold)|interpro:IPR039448|entrezgene/locuslink:20419(identity) - comment:mint author-confidence:3.5675334110410395 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:DvaqDDmQHiSOMl40jbS/w3BOwnc10090 rogid:MgcPGnEzLfUPCtS+m+6NJ4Yyr2k10090 intact-crc:340E7DA6BE50F6D1|rigid:mRSwkM5OTqKCppRKwwZkQuqzwWY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q921E2 uniprotkb:Q80SS5 intact:EBI-8399593|uniprotkb:Q8BKP0|intact:MINT-4122479 intact:EBI-11570206|ensembl:ENSMUSP00000099870 psi-mi:rab31_mouse(display_long)|uniprotkb:Rab31(gene name)|psi-mi:Rab31(display_short) psi-mi:ifnac_mouse(display_long)|uniprotkb:Ifna12(gene name)|psi-mi:Ifna12(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570214|imex:IM-24977-42 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027417|refseq:NP_598446.2|mint:Q921E2|go:"GO:0001891"(phagocytic cup)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005769"(early endosome)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0031623"(receptor internalization)|go:"GO:0032588"(trans-Golgi network membrane)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048193"(Golgi vesicle transport)|go:"GO:0060100"(positive regulation of phagocytosis, engulfment)|go:"GO:0090382"(phagosome maturation)|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0036186"(early phagosome membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|entrezgene/locuslink:106572(identity) refseq:NP_796335.1|ensembl:ENSMUSG00000073811(gene)|ensembl:ENSMUST00000102806(transcript)|go:"GO:0002250"(adaptive immune response)|go:"GO:0002286"(T cell activation involved in immune response)|go:"GO:0002323"(natural killer cell activation involved in immune response)|go:"GO:0005125"(cytokine activity)|go:"GO:0005132"(type I interferon receptor binding)|go:"GO:0005615"(extracellular space)|go:"GO:0006959"(humoral immune response)|go:"GO:0019221"(cytokine-mediated signaling pathway)|go:"GO:0030183"(B cell differentiation)|go:"GO:0033141"(positive regulation of peptidyl-serine phosphorylation of STAT protein)|go:"GO:0042100"(B cell proliferation)|go:"GO:0043330"(response to exogenous dsRNA)|go:"GO:0051607"(defense response to virus)|interpro:IPR000471(Interferon alpha, beta and delta)|interpro:IPR009079(Four-helical cytokine-like, core)|reactome:R-MMU-909733|reactome:R-MMU-912694|entrezgene/locuslink:242519(identity) - comment:mint author-confidence:2.8512064032101727 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:DvaqDDmQHiSOMl40jbS/w3BOwnc10090 rogid:+cC4x5kuyzb0bV6Tx3iQvXNTCL010090 intact-crc:340E7DA6BE50F6D1|rigid:mRSwkM5OTqKCppRKwwZkQuqzwWY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q921E2 uniprotkb:Q3URQ0 intact:EBI-8399593|uniprotkb:Q8BKP0|intact:MINT-4122479 intact:EBI-6910284|ensembl:ENSMUSP00000030030|ensembl:ENSMUSP00000132498 psi-mi:rab31_mouse(display_long)|uniprotkb:Rab31(gene name)|psi-mi:Rab31(display_short) psi-mi:tex10_mouse(display_long)|uniprotkb:Tex10(gene name)|psi-mi:Tex10(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570214|imex:IM-24977-42 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027417|refseq:NP_598446.2|mint:Q921E2|go:"GO:0001891"(phagocytic cup)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005769"(early endosome)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0031623"(receptor internalization)|go:"GO:0032588"(trans-Golgi network membrane)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048193"(Golgi vesicle transport)|go:"GO:0060100"(positive regulation of phagocytosis, engulfment)|go:"GO:0090382"(phagosome maturation)|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0036186"(early phagosome membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|entrezgene/locuslink:106572(identity) refseq:XP_006538018.1|refseq:XP_006538019.1|ensembl:ENSMUSG00000028345(gene)|ensembl:ENSMUST00000030030(transcript)|ensembl:ENSMUST00000164866(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0071339"(MLL1 complex)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR024679|interpro:IPR037947|reactome:R-MMU-6791226|refseq:NP_758508.2|entrezgene/locuslink:269536(identity) - comment:mint author-confidence:1.2589719377600546 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:DvaqDDmQHiSOMl40jbS/w3BOwnc10090 rogid:iGocOH1GUrHKJQ3umzAunS1LfLY10090 intact-crc:340E7DA6BE50F6D1|rigid:mRSwkM5OTqKCppRKwwZkQuqzwWY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q921E2 uniprotkb:P47993 intact:EBI-8399593|uniprotkb:Q8BKP0|intact:MINT-4122479 intact:EBI-11570210|ensembl:ENSMUSP00000027860 psi-mi:rab31_mouse(display_long)|uniprotkb:Rab31(gene name)|psi-mi:Rab31(display_short) psi-mi:xcl1_mouse(display_long)|uniprotkb:C motif chemokine 1(gene name synonym)|uniprotkb:Cytokine SCM-1(gene name synonym)|uniprotkb:Lptn(gene name synonym)|uniprotkb:Ltn(gene name synonym)|uniprotkb:Lymphotaxin(gene name synonym)|uniprotkb:Scyc1(gene name synonym)|uniprotkb:Small-inducible cytokine C1(gene name synonym)|uniprotkb:Xcl1(gene name)|psi-mi:Xcl1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570214|imex:IM-24977-42 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027417|refseq:NP_598446.2|mint:Q921E2|go:"GO:0001891"(phagocytic cup)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005769"(early endosome)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0031623"(receptor internalization)|go:"GO:0032588"(trans-Golgi network membrane)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048193"(Golgi vesicle transport)|go:"GO:0060100"(positive regulation of phagocytosis, engulfment)|go:"GO:0090382"(phagosome maturation)|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0036186"(early phagosome membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|entrezgene/locuslink:106572(identity) refseq:NP_032536.1|ensembl:ENSMUSG00000026573(gene)|ensembl:ENSMUST00000027860(transcript)|go:"GO:0001916"(positive regulation of T cell mediated cytotoxicity)|go:"GO:0002548"(monocyte chemotaxis)|go:"GO:0002690"(positive regulation of leukocyte chemotaxis)|go:"GO:0002725"(negative regulation of T cell cytokine production)|go:"GO:0002726"(positive regulation of T cell cytokine production)|go:"GO:0002839"(positive regulation of immune response to tumor cell)|go:"GO:0005615"(extracellular space)|go:"GO:0006935"(chemotaxis)|go:"GO:0006954"(inflammatory response)|go:"GO:0007186"(G protein-coupled receptor signaling pathway)|go:"GO:0007267"(cell-cell signaling)|go:"GO:0008009"(chemokine activity)|go:"GO:0009615"(response to virus)|go:"GO:0010820"(positive regulation of T cell chemotaxis)|go:"GO:0030593"(neutrophil chemotaxis)|go:"GO:0031640"(killing of cells of another organism)|go:"GO:0032689"(negative regulation of interferon-gamma production)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032733"(positive regulation of interleukin-10 production)|go:"GO:0035782"(mature natural killer cell chemotaxis)|go:"GO:0042379"(chemokine receptor binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045089"(positive regulation of innate immune response)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0048020"(CCR chemokine receptor binding)|go:"GO:0048247"(lymphocyte chemotaxis)|go:"GO:0050727"(regulation of inflammatory response)|go:"GO:0051209"(release of sequestered calcium ion into cytosol)|go:"GO:0051281"(positive regulation of release of sequestered calcium ion into cytosol)|go:"GO:0061844"(antimicrobial humoral immune response mediated by antimicrobial peptide)|go:"GO:0070098"(chemokine-mediated signaling pathway)|go:"GO:0071346"(cellular response to interferon-gamma)|go:"GO:0071347"(cellular response to interleukin-1)|go:"GO:0071353"(cellular response to interleukin-4)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071560"(cellular response to transforming growth factor beta stimulus)|go:"GO:0071636"(positive regulation of transforming growth factor beta production)|go:"GO:0071663"(positive regulation of granzyme B production)|go:"GO:0090023"(positive regulation of neutrophil chemotaxis)|go:"GO:2000412"(positive regulation of thymocyte migration)|go:"GO:2000503"(positive regulation of natural killer cell chemotaxis)|go:"GO:2000513"(positive regulation of granzyme A production)|go:"GO:2000518"(negative regulation of T-helper 1 cell activation)|go:"GO:2000538"(positive regulation of B cell chemotaxis)|go:"GO:2000553"(positive regulation of T-helper 2 cell cytokine production)|go:"GO:2000556"(positive regulation of T-helper 1 cell cytokine production)|go:"GO:2000558"(positive regulation of immunoglobulin production in mucosal tissue)|go:"GO:2000562"(negative regulation of CD4-positive, alpha-beta T cell proliferation)|go:"GO:2000563"(positive regulation of CD4-positive, alpha-beta T cell proliferation)|go:"GO:2000566"(positive regulation of CD8-positive, alpha-beta T cell proliferation)|interpro:IPR001811(Small chemokine, interleukin-8-like)|interpro:IPR008105(Lymphotactin precursor)|interpro:IPR036048|interpro:IPR039809|reactome:R-MMU-380108|reactome:R-MMU-416476|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|entrezgene/locuslink:16963(identity) - comment:mint author-confidence:2.029920441827214 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:DvaqDDmQHiSOMl40jbS/w3BOwnc10090 rogid:PXokxkT+Tm9HAB624lO2XXCVmHk10090 intact-crc:340E7DA6BE50F6D1|rigid:mRSwkM5OTqKCppRKwwZkQuqzwWY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q99KL7 uniprotkb:Q9DB54 intact:EBI-11570282|ensembl:ENSMUSP00000031011 intact:EBI-11567974|uniprotkb:Q6PFA4|uniprotkb:Q3UD74|ensembl:ENSMUSP00000031419 psi-mi:rab28_mouse(display_long)|uniprotkb:Rab28(gene name)|psi-mi:Rab28(display_short) psi-mi:f216a_mouse(display_long)|uniprotkb:Fam216a(gene name)|psi-mi:Fam216a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570286|imex:IM-24977-44 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_081571.1|ensembl:ENSMUSG00000029128(gene)|ensembl:ENSMUST00000031011(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:1901998"(toxin transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0035253"(ciliary rootlet)|go:"GO:0036064"(ciliary basal body)|entrezgene/locuslink:100972(identity) refseq:NP_081159.1|ensembl:ENSMUSG00000029463(gene)|ensembl:ENSMUST00000031419(transcript)|interpro:IPR029373|entrezgene/locuslink:68948(identity) - - author-confidence:1.116170640410268 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ltE8CW8ecVyyCnRbwrmhQtOEOlw10090 rogid:esvXrLMS1/ukGuV5x3AuEOI+u0s10090 intact-crc:0285B53CA751F557|rigid:qTBgQC7BZvL+ExDD0WEFOuGJjpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q99KL7 uniprotkb:Q8R574 intact:EBI-11570282|ensembl:ENSMUSP00000031011 intact:EBI-11570288|ensembl:ENSMUSP00000004955|ensembl:ENSMUSP00000126274 psi-mi:rab28_mouse(display_long)|uniprotkb:Rab28(gene name)|psi-mi:Rab28(display_short) psi-mi:kprb_mouse(display_long)|uniprotkb:41 kDa phosphoribosypyrophosphate synthetase-associated protein(gene name synonym)|uniprotkb:Prpsap2(gene name)|psi-mi:Prpsap2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570286|imex:IM-24977-44 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_081571.1|ensembl:ENSMUSG00000029128(gene)|ensembl:ENSMUST00000031011(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:1901998"(toxin transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0035253"(ciliary rootlet)|go:"GO:0036064"(ciliary basal body)|entrezgene/locuslink:100972(identity) refseq:NP_001157714.1|refseq:NP_659055.1|refseq:XP_006532824.1|ensembl:ENSMUSG00000020528(gene)|ensembl:ENSMUST00000004955(transcript)|ensembl:ENSMUST00000168115(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0002189"(ribose phosphate diphosphokinase complex)|go:"GO:0004749"(ribose phosphate diphosphokinase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006015"(5-phosphoribose 1-diphosphate biosynthetic process)|go:"GO:0006164"(purine nucleotide biosynthetic process)|go:"GO:0009116"(nucleoside metabolic process)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0060348"(bone development)|interpro:IPR000836(Phosphoribosyltransferase)|interpro:IPR005946(Phosphoribosyl pyrophosphokinase)|interpro:IPR029099|interpro:IPR029057|entrezgene/locuslink:212627(identity) - - author-confidence:5.965881200030703 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ltE8CW8ecVyyCnRbwrmhQtOEOlw10090 rogid:bQs5KLnqnsyHNeiLgOymGGQ6Le810090 intact-crc:0285B53CA751F557|rigid:qTBgQC7BZvL+ExDD0WEFOuGJjpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q99KL7 uniprotkb:Q6PAL0 intact:EBI-11570282|ensembl:ENSMUSP00000031011 intact:EBI-5717141|uniprotkb:Q80TC0|ensembl:ENSMUSP00000047251|ensembl:ENSMUSP00000127351 psi-mi:rab28_mouse(display_long)|uniprotkb:Rab28(gene name)|psi-mi:Rab28(display_short) psi-mi:bend3_mouse(display_long)|uniprotkb:Bend3(gene name)|psi-mi:Bend3(display_short)|uniprotkb:Kiaa1553(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570286|imex:IM-24977-44 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_081571.1|ensembl:ENSMUSG00000029128(gene)|ensembl:ENSMUST00000031011(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:1901998"(toxin transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0035253"(ciliary rootlet)|go:"GO:0036064"(ciliary basal body)|entrezgene/locuslink:100972(identity) refseq:NP_950193.1|refseq:XP_006512832.1|refseq:XP_006512833.1|refseq:XP_006512834.1|ensembl:ENSMUSG00000038214(gene)|ensembl:ENSMUST00000040147(transcript)|ensembl:ENSMUST00000167488(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000182"(rDNA binding)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000792"(heterochromatin)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006306"(DNA methylation)|go:"GO:0034773"(histone H4-K20 trimethylation)|go:"GO:0036124"(histone H3-K9 trimethylation)|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0051260"(protein homooligomerization)|go:"GO:0098532"(histone H3-K27 trimethylation)|go:"GO:1903580"(positive regulation of ATP metabolic process)|interpro:IPR018379|interpro:IPR033583|go:"GO:0080182"(histone H3-K4 trimethylation)|entrezgene/locuslink:331623(identity) - - author-confidence:4.852923588810804 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ltE8CW8ecVyyCnRbwrmhQtOEOlw10090 rogid:rFe+DYX+2sTAzgmcKRwnHMpN4D410090 intact-crc:0285B53CA751F557|rigid:qTBgQC7BZvL+ExDD0WEFOuGJjpg false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q99P58 uniprotkb:Q91YM4 intact:EBI-11565917|uniprotkb:Q8CIX0|ensembl:ENSMUSP00000068349|ensembl:ENSMUSP00000112807|ensembl:ENSMUSP00000114094 intact:EBI-8353709|intact:MINT-4121960|uniprotkb:Q6ZQ19|uniprotkb:Q8C6D1|uniprotkb:Q3TKZ4|uniprotkb:O89082|ensembl:ENSMUSP00000000394|ensembl:ENSMUSP00000114256|ensembl:ENSMUSP00000140835 psi-mi:rb27b_mouse(display_long)|uniprotkb:Rab27b(gene name)|psi-mi:Rab27b(display_short) psi-mi:fakd4_mouse(display_long)|uniprotkb:Tbrg4(gene name)|psi-mi:Tbrg4(display_short)|uniprotkb:Kiaa0948(gene name synonym)|uniprotkb:Transforming growth factor beta regulator 4(gene name synonym)|uniprotkb:Protein TBRG4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570319|imex:IM-24977-45 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001076022.1|refseq:NP_001289727.1|refseq:NP_085031.3|ensembl:ENSMUSG00000024511(gene)|ensembl:ENSMUST00000069749(transcript)|ensembl:ENSMUST00000117692(transcript)|ensembl:ENSMUST00000121693(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030141"(secretory granule)|go:"GO:0030667"(secretory granule membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0071985"(multivesicular body sorting pathway)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0099641"(anterograde axonal protein transport)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041837|rcsb pdb:2IEY|rcsb pdb:2IEZ|rcsb pdb:2IF0|rcsb pdb:2ZET|reactome:R-MMU-114608|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-46237N|entrezgene/locuslink:80718(identity) refseq:NP_001123929.1|refseq:NP_598772.1|refseq:XP_006514670.1|refseq:XP_006514671.1|ensembl:ENSMUSG00000000384(gene)|ensembl:ENSMUST00000000394(transcript)|ensembl:ENSMUST00000156969(transcript)|ensembl:ENSMUST00000189268(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0016071"(mRNA metabolic process)|go:"GO:0044528"(regulation of mitochondrial mRNA stability)|go:"GO:0090615"(mitochondrial mRNA processing)|interpro:IPR010622(FAST kinase leucine-rich)|interpro:IPR013579(FAST kinase-like protein, subdomain 2)|interpro:IPR013584(RAP domain)|interpro:IPR016024(Armadillo-type fold)|mint:Q91YM4|entrezgene/locuslink:21379(identity) - - comment:mint|function:May play a role in cell cycle progression|author-confidence:1.566708733548844 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:R+P/aw+uO3tZcL5SFU6K0WwbOY410090 rogid:in3JOCGu68ilWk/IHs5nqyhJwr010090 intact-crc:8305260E770027FE|rigid:IAfHgSdpaqu0u2zkO5PA9dCAmHA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q99P58 uniprotkb:O88342 intact:EBI-11565917|uniprotkb:Q8CIX0|ensembl:ENSMUSP00000068349|ensembl:ENSMUSP00000112807|ensembl:ENSMUSP00000114094 intact:EBI-6914976|ensembl:ENSMUSP00000005234 psi-mi:rb27b_mouse(display_long)|uniprotkb:Rab27b(gene name)|psi-mi:Rab27b(display_short) psi-mi:wdr1_mouse(display_long)|uniprotkb:Wdr1(gene name)|psi-mi:Wdr1(display_short)|uniprotkb:Actin-interacting protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570319|imex:IM-24977-45 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001076022.1|refseq:NP_001289727.1|refseq:NP_085031.3|ensembl:ENSMUSG00000024511(gene)|ensembl:ENSMUST00000069749(transcript)|ensembl:ENSMUST00000117692(transcript)|ensembl:ENSMUST00000121693(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030141"(secretory granule)|go:"GO:0030667"(secretory granule membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0071985"(multivesicular body sorting pathway)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0099641"(anterograde axonal protein transport)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041837|rcsb pdb:2IEY|rcsb pdb:2IEZ|rcsb pdb:2IF0|rcsb pdb:2ZET|reactome:R-MMU-114608|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-46237N|entrezgene/locuslink:80718(identity) go:"GO:0045199"(maintenance of epithelial cell apical/basal polarity)|go:"GO:0045214"(sarcomere organization)|go:"GO:0048713"(regulation of oligodendrocyte differentiation)|go:"GO:0051015"(actin filament binding)|go:"GO:0060307"(regulation of ventricular cardiac muscle cell membrane repolarization)|go:"GO:1990266"(neutrophil migration)|interpro:IPR001680(WD40 repeat)|interpro:IPR011045(Nitrous oxide reductase, N-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|reactome:R-MMU-114608|ensembl:ENSMUSG00000005103(gene)|ensembl:ENSMUST00000005234(transcript)|go:"GO:0002102"(podosome)|go:"GO:0002446"(neutrophil mediated immunity)|go:"GO:0003779"(actin binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030042"(actin filament depolymerization)|go:"GO:0030043"(actin filament fragmentation)|go:"GO:0030054"(cell junction)|go:"GO:0030220"(platelet formation)|go:"GO:0030834"(regulation of actin filament depolymerization)|go:"GO:0030836"(positive regulation of actin filament depolymerization)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0030865"(cortical cytoskeleton organization)|go:"GO:0040011"(locomotion)|go:"GO:0042247"(establishment of planar polarity of follicular epithelium)|go:"GO:0042995"(cell projection)|go:"GO:0043209"(myelin sheath)|go:"GO:0043297"(apical junction assembly)|refseq:NP_035845.1|entrezgene/locuslink:22388(identity) - - author-confidence:1.2041719399020738 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:R+P/aw+uO3tZcL5SFU6K0WwbOY410090 rogid:PVIlQDv8eXQrI3QBWJOjKlj/Zig10090 intact-crc:8305260E770027FE|rigid:IAfHgSdpaqu0u2zkO5PA9dCAmHA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q99P58 uniprotkb:Q8C119 intact:EBI-11565917|uniprotkb:Q8CIX0|ensembl:ENSMUSP00000068349|ensembl:ENSMUSP00000112807|ensembl:ENSMUSP00000114094 intact:EBI-11570313|uniprotkb:Q8BWV6|uniprotkb:Q80VN3|ensembl:ENSMUSP00000051297 psi-mi:rb27b_mouse(display_long)|uniprotkb:Rab27b(gene name)|psi-mi:Rab27b(display_short) psi-mi:ndnf_mouse(display_long)|uniprotkb:Epidermacan(gene name synonym)|uniprotkb:Neuron-derived neurotrophic factor(gene name synonym)|uniprotkb:Ndnf(gene name)|psi-mi:Ndnf(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570319|imex:IM-24977-45 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001076022.1|refseq:NP_001289727.1|refseq:NP_085031.3|ensembl:ENSMUSG00000024511(gene)|ensembl:ENSMUST00000069749(transcript)|ensembl:ENSMUST00000117692(transcript)|ensembl:ENSMUST00000121693(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030141"(secretory granule)|go:"GO:0030667"(secretory granule membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0071985"(multivesicular body sorting pathway)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0099641"(anterograde axonal protein transport)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041837|rcsb pdb:2IEY|rcsb pdb:2IEZ|rcsb pdb:2IF0|rcsb pdb:2ZET|reactome:R-MMU-114608|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-46237N|entrezgene/locuslink:80718(identity) refseq:NP_765987.2|refseq:XP_006506591.1|ensembl:ENSMUSG00000049001(gene)|ensembl:ENSMUST00000054351(transcript)|go:"GO:0001525"(angiogenesis)|go:"GO:0001764"(neuron migration)|go:"GO:0002931"(response to ischemia)|go:"GO:0005539"(glycosaminoglycan binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0007263"(nitric oxide mediated signal transduction)|go:"GO:0008201"(heparin binding)|go:"GO:0010811"(positive regulation of cell-substrate adhesion)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0019800"(peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan)|go:"GO:0021828"(gonadotrophin-releasing hormone neuronal migration to the hypothalamus)|go:"GO:0030198"(extracellular matrix organization)|go:"GO:0031012"(extracellular matrix)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044344"(cellular response to fibroblast growth factor stimulus)|go:"GO:0061042"(vascular wound healing)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:2000352"(negative regulation of endothelial cell apoptotic process)|interpro:IPR003961(Fibronectin, type III)|interpro:IPR019326|interpro:IPR036116|entrezgene/locuslink:68169(identity) - - author-confidence:2.3903152160137373 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:R+P/aw+uO3tZcL5SFU6K0WwbOY410090 rogid:w9BFwXWoU12n5TaPMRRvLXH+9OE10090 intact-crc:8305260E770027FE|rigid:IAfHgSdpaqu0u2zkO5PA9dCAmHA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q923S9 uniprotkb:A4Q9E5 intact:EBI-7893582|uniprotkb:Q9D3Q6|intact:MINT-7899121|uniprotkb:Q3UQR3|ensembl:ENSMUSP00000032879|ensembl:ENSMUSP00000102798 intact:EBI-11570249|uniprotkb:Q8VDS2|uniprotkb:Q8C0Y7|uniprotkb:Q8BV51|ensembl:ENSMUSP00000032414 psi-mi:rab30_mouse(display_long)|uniprotkb:Rab30(gene name)|psi-mi:Rab30(display_short)|uniprotkb:Rsb30(gene name synonym) psi-mi:ttll3_mouse(display_long)|uniprotkb:Tubulin--tyrosine ligase-like protein 3(gene name synonym)|uniprotkb:Ttll3(gene name)|psi-mi:Ttll3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570247|imex:IM-24977-43 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083770.2|refseq:XP_006508356.1|refseq:XP_006508357.1|ensembl:ENSMUSG00000030643(gene)|ensembl:ENSMUST00000032879(transcript)|ensembl:ENSMUST00000107180(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0007030"(Golgi organization)|go:"GO:0016020"(membrane)|go:"GO:0031985"(Golgi cisterna)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043231"(intracellular membrane-bounded organelle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041820|mint:Q923S9|reactome:R-MMU-6811438|reactome:R-MMU-8873719|entrezgene/locuslink:75985(identity) refseq:NP_001136204.1|refseq:NP_598684.4|ensembl:ENSMUSG00000030276(gene)|ensembl:ENSMUST00000032414(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005874"(microtubule)|go:"GO:0005929"(cilium)|go:"GO:0005930"(axoneme)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0018094"(protein polyglycylation)|go:"GO:0030317"(flagellated sperm motility)|go:"GO:0035082"(axoneme assembly)|go:"GO:0036126"(sperm flagellum)|go:"GO:0060271"(cilium assembly)|go:"GO:0070735"(protein-glycine ligase activity)|go:"GO:0070736"(protein-glycine ligase activity, initiating)|interpro:IPR004344(Tubulin-tyrosine ligase)|interpro:IPR027753|reactome:R-MMU-8955332|entrezgene/locuslink:101100(identity) - comment:mint author-confidence:1.0278123376750876 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Qh3KHalGgosuTb+p7Oe39ix9/UM10090 rogid:DYVesfNKXbWcgcDVT6Qb/FnNyO810090 intact-crc:DBA7791440E56FB3|rigid:9FoJ/E6oc82XvEyVL0QAtmglDCE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q923S9 uniprotkb:Q9Z1T1 intact:EBI-7893582|uniprotkb:Q9D3Q6|intact:MINT-7899121|uniprotkb:Q3UQR3|ensembl:ENSMUSP00000032879|ensembl:ENSMUSP00000102798 intact:EBI-643061|uniprotkb:E9QQ08|uniprotkb:Q91YR4|ensembl:ENSMUSP00000022196 psi-mi:rab30_mouse(display_long)|uniprotkb:Rab30(gene name)|psi-mi:Rab30(display_short)|uniprotkb:Rsb30(gene name synonym) psi-mi:ap3b1_mouse(display_long)|uniprotkb:Adaptor protein complex AP-3 subunit beta-1(gene name synonym)|uniprotkb:Beta-3A-adaptin(gene name synonym)|uniprotkb:Clathrin assembly protein complex 3 beta-1 large chain(gene name synonym)|uniprotkb:Ap3b1(gene name)|psi-mi:Ap3b1(display_short)|uniprotkb:Adaptor-related protein complex 3 subunit beta-1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570247|imex:IM-24977-43 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083770.2|refseq:XP_006508356.1|refseq:XP_006508357.1|ensembl:ENSMUSG00000030643(gene)|ensembl:ENSMUST00000032879(transcript)|ensembl:ENSMUST00000107180(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0007030"(Golgi organization)|go:"GO:0016020"(membrane)|go:"GO:0031985"(Golgi cisterna)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043231"(intracellular membrane-bounded organelle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041820|mint:Q923S9|reactome:R-MMU-6811438|reactome:R-MMU-8873719|entrezgene/locuslink:75985(identity) refseq:NP_033810.2|ensembl:ENSMUSG00000021686(gene)|ensembl:ENSMUST00000022196(transcript)|go:"GO:0000902"(cell morphogenesis)|go:"GO:0002224"(toll-like receptor signaling pathway)|go:"GO:0002244"(hematopoietic progenitor cell differentiation)|go:"GO:0003016"(respiratory system process)|go:"GO:0005739"(mitochondrion)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006464"(cellular protein modification process)|go:"GO:0006622"(protein targeting to lysosome)|go:"GO:0006829"(zinc ion transport)|go:"GO:0006882"(cellular zinc ion homeostasis)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006954"(inflammatory response)|go:"GO:0007040"(lysosome organization)|go:"GO:0007283"(spermatogenesis)|go:"GO:0007338"(single fertilization)|go:"GO:0007596"(blood coagulation)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0016182"(synaptic vesicle budding from endosome)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0030123"(AP-3 adaptor complex)|go:"GO:0030131"(clathrin adaptor complex)|go:"GO:0030324"(lung development)|go:"GO:0030665"(clathrin-coated vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0030851"(granulocyte differentiation)|go:"GO:0032438"(melanosome organization)|go:"GO:0034394"(protein localization to cell surface)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0043473"(pigmentation)|go:"GO:0045202"(synapse)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048007"(antigen processing and presentation, exogenous lipid antigen via MHC class Ib)|go:"GO:0048490"(anterograde synaptic vesicle transport)|go:"GO:0048872"(homeostasis of number of cells)|go:"GO:0050790"(regulation of catalytic activity)|go:"GO:0051138"(positive regulation of NK T cell differentiation)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0060425"(lung morphogenesis)|go:"GO:0061024"(membrane organization)|go:"GO:0090152"(establishment of protein localization to mitochondrial membrane involved in mitochondrial fission)|go:"GO:0098773"(skin epidermis development)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR002553(Clathrin/coatomer adaptor, adaptin-like, N-terminal)|interpro:IPR015151(Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR026739|interpro:IPR026740|interpro:IPR029390|interpro:IPR029394|mint:Q9Z1T1|reactome:R-MMU-432722|dip:DIP-49018N|entrezgene/locuslink:11774(identity) - comment:mint author-confidence:1.3066318707505458 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Qh3KHalGgosuTb+p7Oe39ix9/UM10090 rogid:Xtcoo5Kk0ZYpVbr+WEBfVxidkVU10090 intact-crc:DBA7791440E56FB3|rigid:9FoJ/E6oc82XvEyVL0QAtmglDCE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q923S9 uniprotkb:Q9D6M3 intact:EBI-7893582|uniprotkb:Q9D3Q6|intact:MINT-7899121|uniprotkb:Q3UQR3|ensembl:ENSMUSP00000032879|ensembl:ENSMUSP00000102798 intact:EBI-445390|uniprotkb:Q3TRY1|ensembl:ENSMUSP00000019226|ensembl:ENSMUSP00000101629|ensembl:ENSMUSP00000144231 psi-mi:rab30_mouse(display_long)|uniprotkb:Rab30(gene name)|psi-mi:Rab30(display_short)|uniprotkb:Rsb30(gene name synonym) psi-mi:ghc1_mouse(display_long)|uniprotkb:"Glutamate/H(+) symporter 1"(gene name synonym)|uniprotkb:Solute carrier family 25 member 22(gene name synonym)|uniprotkb:Slc25a22(gene name)|psi-mi:Slc25a22(display_short)|uniprotkb:Gc1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570247|imex:IM-24977-43 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083770.2|refseq:XP_006508356.1|refseq:XP_006508357.1|ensembl:ENSMUSG00000030643(gene)|ensembl:ENSMUST00000032879(transcript)|ensembl:ENSMUST00000107180(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0007030"(Golgi organization)|go:"GO:0016020"(membrane)|go:"GO:0031985"(Golgi cisterna)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043231"(intracellular membrane-bounded organelle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041820|mint:Q923S9|reactome:R-MMU-6811438|reactome:R-MMU-8873719|entrezgene/locuslink:75985(identity) refseq:NP_001171047.1|refseq:NP_080922.1|refseq:XP_006536295.1|refseq:XP_006536296.1|ensembl:ENSMUSG00000019082(gene)|ensembl:ENSMUST00000019226(transcript)|ensembl:ENSMUST00000106007(transcript)|ensembl:ENSMUST00000201710(transcript)|go:"GO:0005313"(L-glutamate transmembrane transporter activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0015183"(L-aspartate transmembrane transporter activity)|go:"GO:0015293"(symporter activity)|go:"GO:0015810"(aspartate transmembrane transport)|go:"GO:0015813"(L-glutamate transmembrane transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0022857"(transmembrane transporter activity)|go:"GO:0043490"(malate-aspartate shuttle)|interpro:IPR002067(Mitochondrial carrier protein)|interpro:IPR018108|interpro:IPR023395|mint:Q9D6M3|reactome:R-MMU-428643|entrezgene/locuslink:68267(identity) - comment:mint author-confidence:3.1948220249580963 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Qh3KHalGgosuTb+p7Oe39ix9/UM10090 rogid:K98xT2P2uYsFQcZf3ksO3Jb4GU810090 intact-crc:DBA7791440E56FB3|rigid:9FoJ/E6oc82XvEyVL0QAtmglDCE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q923S9 uniprotkb:Q8CDG3 intact:EBI-7893582|uniprotkb:Q9D3Q6|intact:MINT-7899121|uniprotkb:Q3UQR3|ensembl:ENSMUSP00000032879|ensembl:ENSMUSP00000102798 intact:EBI-646144|uniprotkb:Q7TMU9|uniprotkb:Q8BP90 psi-mi:rab30_mouse(display_long)|uniprotkb:Rab30(gene name)|psi-mi:Rab30(display_short)|uniprotkb:Rsb30(gene name synonym) psi-mi:vcip1_mouse(display_long)|uniprotkb:Valosin-containing protein p97/p47 complex-interacting protein p135(gene name synonym)|uniprotkb:Valosin-containing protein p97/p47 complex-interacting protein 1(gene name synonym)|uniprotkb:Vcpip1(gene name)|psi-mi:Vcpip1(display_short)|uniprotkb:Vcip135(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570247|imex:IM-24977-43 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083770.2|refseq:XP_006508356.1|refseq:XP_006508357.1|ensembl:ENSMUSG00000030643(gene)|ensembl:ENSMUST00000032879(transcript)|ensembl:ENSMUST00000107180(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0007030"(Golgi organization)|go:"GO:0016020"(membrane)|go:"GO:0031985"(Golgi cisterna)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043231"(intracellular membrane-bounded organelle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041820|mint:Q923S9|reactome:R-MMU-6811438|reactome:R-MMU-8873719|entrezgene/locuslink:75985(identity) interpro:IPR029071|refseq:NP_775619.2|interpro:IPR003323(Ovarian tumour, otubain)|mint:Q8CDG3|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005795"(Golgi stack)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007030"(Golgi organization)|go:"GO:0016320"(endoplasmic reticulum membrane fusion)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0035871"(protein K11-linked deubiquitination)|go:"GO:0045202"(synapse)|go:"GO:0071108"(protein K48-linked deubiquitination)|go:"GO:0090168"(Golgi reassembly)|go:"GO:0106300"(protein-DNA covalent cross-linking repair)|go:"GO:1905634"(regulation of protein localization to chromatin)|reactome:R-MMU-5689896|interpro:IPR039087|entrezgene/locuslink:70675(identity) - comment:mint author-confidence:1.618474203838142 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Qh3KHalGgosuTb+p7Oe39ix9/UM10090 rogid:jTwHlp3wXtIw4o5+Oqvb47HbKEk10090 intact-crc:DBA7791440E56FB3|rigid:9FoJ/E6oc82XvEyVL0QAtmglDCE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CQD1 uniprotkb:Q80TP3 intact:EBI-647712|uniprotkb:Q9DCN5|uniprotkb:Q3UCX7|uniprotkb:Q4VAA1|ensembl:ENSMUSP00000017975 intact:EBI-2553642|uniprotkb:Q810V6|uniprotkb:Q698K9|uniprotkb:Q9CXE9|uniprotkb:Q6PFQ9|uniprotkb:Q80VL4|uniprotkb:Q6PEQ8 psi-mi:rab5a_mouse(display_long)|uniprotkb:Rab5a(gene name)|psi-mi:Rab5a(display_short)|uniprotkb:nnyRab5a(gene name synonym) psi-mi:ubr5_mouse(display_long)|uniprotkb:Ubr5(gene name)|psi-mi:Ubr5(display_short)|uniprotkb:Edd(gene name synonym)|uniprotkb:Edd1(gene name synonym)|uniprotkb:Kiaa0896(gene name synonym)|uniprotkb:E3 ubiquitin-protein ligase, HECT domain-containing 1(gene name synonym)|uniprotkb:Hyperplastic discs protein homolog(gene name synonym)|uniprotkb:HECT-type E3 ubiquitin transferase UBR5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570351|imex:IM-24977-46 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080163.1|ensembl:ENSMUSG00000017831(gene)|ensembl:ENSMUST00000017975(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006909"(phagocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032009"(early phagosome)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043679"(axon terminus)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045121"(membrane raft)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:0098842"(postsynaptic early endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000286"(receptor internalization involved in canonical Wnt signaling pathway)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-1660499|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-983231|go:"GO:0008021"(synaptic vesicle)|entrezgene/locuslink:271457(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0032700"(negative regulation of interleukin-17 production)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034450"(ubiquitin-ubiquitin ligase activity)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050847"(progesterone receptor signaling pathway)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:1901315"(negative regulation of histone H2A K63-linked ubiquitination)|go:"GO:2000779"(regulation of double-strand break repair)|go:"GO:2000780"(negative regulation of double-strand break repair)|interpro:IPR000569(HECT)|interpro:IPR002004(Polyadenylate-binding protein/Hyperplastic disc protein)|interpro:IPR003126(Zinc finger, N-recognin)|interpro:IPR009091(Regulator of chromosome condensation/beta-lactamase-inhibitor protein II)|interpro:IPR024725|interpro:IPR035983|interpro:IPR036053|go:"GO:0061630"(ubiquitin protein ligase activity)|refseq:NP_001074828.2|refseq:NP_001106192.1|dip:DIP-56890N|mint:Q80TP3|entrezgene/locuslink:70790(identity) - - author-confidence:11.15010379869301 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:TleQFpdeUdtlHFp7sMsgWpx6p8E10090 rogid:iUtn1CtWFtqWQV3UH06xJ5R5Ux010090 intact-crc:517770CA6EF791FE|rigid:StsQbAJbYnPoIUw4L0w3okl8LTc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CQD1 uniprotkb:Q8K299 intact:EBI-647712|uniprotkb:Q9DCN5|uniprotkb:Q3UCX7|uniprotkb:Q4VAA1|ensembl:ENSMUSP00000017975 intact:EBI-11570342|uniprotkb:Q8R330|uniprotkb:Q8BZZ2|uniprotkb:Q9CUC3|uniprotkb:Q9D4G8|uniprotkb:Q91WD6|ensembl:ENSMUSP00000022610 psi-mi:rab5a_mouse(display_long)|uniprotkb:Rab5a(gene name)|psi-mi:Rab5a(display_short)|uniprotkb:nnyRab5a(gene name synonym) psi-mi:scar5_mouse(display_long)|uniprotkb:Scara5(gene name)|psi-mi:Scara5(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570351|imex:IM-24977-46 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080163.1|ensembl:ENSMUSG00000017831(gene)|ensembl:ENSMUST00000017975(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006909"(phagocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032009"(early phagosome)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043679"(axon terminus)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045121"(membrane raft)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:0098842"(postsynaptic early endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000286"(receptor internalization involved in canonical Wnt signaling pathway)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-1660499|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-983231|go:"GO:0008021"(synaptic vesicle)|entrezgene/locuslink:271457(identity) refseq:NP_001161790.1|refseq:NP_083179.2|ensembl:ENSMUSG00000022032(gene)|ensembl:ENSMUST00000022610(transcript)|go:"GO:0005044"(scavenger receptor activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006879"(cellular iron ion homeostasis)|go:"GO:0006897"(endocytosis)|go:"GO:0009897"(external side of plasma membrane)|go:"GO:0009986"(cell surface)|go:"GO:0030666"(endocytic vesicle membrane)|go:"GO:0034605"(cellular response to heat)|go:"GO:0034755"(iron ion transmembrane transport)|go:"GO:0070207"(protein homotrimerization)|go:"GO:0070287"(ferritin receptor activity)|interpro:IPR001190(Speract/scavenger receptor)|interpro:IPR008160(Collagen triple helix repeat)|interpro:IPR017448(Speract/scavenger receptor related)|interpro:IPR034726|interpro:IPR036772|rcsb pdb:7BZZ|entrezgene/locuslink:71145(identity) - - author-confidence:3.446152308293721 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:TleQFpdeUdtlHFp7sMsgWpx6p8E10090 rogid:fLrsemBBHPYvaPXqwoveFxDioAc10090 intact-crc:517770CA6EF791FE|rigid:StsQbAJbYnPoIUw4L0w3okl8LTc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CQD1 uniprotkb:Q64008 intact:EBI-647712|uniprotkb:Q9DCN5|uniprotkb:Q3UCX7|uniprotkb:Q4VAA1|ensembl:ENSMUSP00000017975 intact:EBI-9986497|uniprotkb:Q8BHJ0|uniprotkb:Q99P59|uniprotkb:Q99P90 psi-mi:rab5a_mouse(display_long)|uniprotkb:Rab5a(gene name)|psi-mi:Rab5a(display_short)|uniprotkb:nnyRab5a(gene name synonym) psi-mi:rab34_mouse(display_long)|uniprotkb:Rab34(gene name)|psi-mi:Rab34(display_short)|uniprotkb:Rab39(gene name synonym)|uniprotkb:Rah(gene name synonym)|uniprotkb:Rah1(gene name synonym)|uniprotkb:Ras-related homolog(gene name synonym)|uniprotkb:Ras-related protein Rab-39(gene name synonym)|uniprotkb:Ras-related protein Rah(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570351|imex:IM-24977-46 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080163.1|ensembl:ENSMUSG00000017831(gene)|ensembl:ENSMUST00000017975(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006909"(phagocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032009"(early phagosome)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043679"(axon terminus)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045121"(membrane raft)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:0098842"(postsynaptic early endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000286"(receptor internalization involved in canonical Wnt signaling pathway)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-1660499|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-983231|go:"GO:0008021"(synaptic vesicle)|entrezgene/locuslink:271457(identity) reactome:R-MMU-8873719|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0005929"(cilium)|go:"GO:0006897"(endocytosis)|go:"GO:0007041"(lysosomal transport)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030030"(cell projection organization)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031982"(vesicle)|go:"GO:0031985"(Golgi cisterna)|go:"GO:0032418"(lysosome localization)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045880"(positive regulation of smoothened signaling pathway)|go:"GO:0005770"(late endosome)|go:"GO:0050714"(positive regulation of protein secretion)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:0090385"(phagosome-lysosome fusion)|go:"GO:1900426"(positive regulation of defense response to bacterium)|go:"GO:1905171"(positive regulation of protein localization to phagocytic vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR027417|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|refseq:NP_001152954.1|refseq:NP_258436.2|entrezgene/locuslink:19376(identity) - - author-confidence:113.43688807412815 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:TleQFpdeUdtlHFp7sMsgWpx6p8E10090 rogid:BBB9N/zuCY5aiJ1YDRDJLFB8mgQ10090 intact-crc:517770CA6EF791FE|rigid:StsQbAJbYnPoIUw4L0w3okl8LTc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CQD1 uniprotkb:Q3UGX2 intact:EBI-647712|uniprotkb:Q9DCN5|uniprotkb:Q3UCX7|uniprotkb:Q4VAA1|ensembl:ENSMUSP00000017975 intact:EBI-11566371|ensembl:ENSMUSP00000021458 psi-mi:rab5a_mouse(display_long)|uniprotkb:Rab5a(gene name)|psi-mi:Rab5a(display_short)|uniprotkb:nnyRab5a(gene name synonym) psi-mi:q3ugx2_mouse(display_long)|uniprotkb:Spnb1(gene name synonym)|uniprotkb:Sptb(gene name)|psi-mi:Sptb(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570351|imex:IM-24977-46 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080163.1|ensembl:ENSMUSG00000017831(gene)|ensembl:ENSMUST00000017975(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006909"(phagocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032009"(early phagosome)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043679"(axon terminus)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045121"(membrane raft)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:0098842"(postsynaptic early endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000286"(receptor internalization involved in canonical Wnt signaling pathway)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-1660499|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-983231|go:"GO:0008021"(synaptic vesicle)|entrezgene/locuslink:271457(identity) refseq:NP_038703.3|ensembl:ENSMUSG00000021061(gene)|ensembl:ENSMUST00000021458(transcript)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005829"(cytosol)|go:"GO:0008091"(spectrin)|go:"GO:0014731"(spectrin-associated cytoskeleton)|go:"GO:0030506"(ankyrin binding)|go:"GO:0051015"(actin filament binding)|go:"GO:0051693"(actin filament capping)|interpro:IPR001589(Actinin-type, actin-binding, conserved site)|interpro:IPR001605(Spectrin/pleckstrin-like)|interpro:IPR001715(Calponin-like actin-binding)|interpro:IPR001849(Pleckstrin-like)|interpro:IPR002017(Spectrin repeat)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR016343(Spectrin, beta subunit)|interpro:IPR018159|interpro:IPR036872|interpro:IPR041681|entrezgene/locuslink:20741(identity) - - author-confidence:1.5224403313704105 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:TleQFpdeUdtlHFp7sMsgWpx6p8E10090 rogid:3vhE91pVaMVt5H01bxPQ9WQXMvI10090 intact-crc:517770CA6EF791FE|rigid:StsQbAJbYnPoIUw4L0w3okl8LTc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CQD1 uniprotkb:Q8R081 intact:EBI-647712|uniprotkb:Q9DCN5|uniprotkb:Q3UCX7|uniprotkb:Q4VAA1|ensembl:ENSMUSP00000017975 intact:EBI-647483|uniprotkb:O54789|uniprotkb:Q8K0S7|uniprotkb:Q499X2|ensembl:ENSMUSP00000049407|ensembl:ENSMUSP00000133728 psi-mi:rab5a_mouse(display_long)|uniprotkb:Rab5a(gene name)|psi-mi:Rab5a(display_short)|uniprotkb:nnyRab5a(gene name synonym) psi-mi:hnrpl_mouse(display_long)|uniprotkb:Hnrpl(gene name synonym)|uniprotkb:Hnrnpl(gene name)|psi-mi:Hnrnpl(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570351|imex:IM-24977-46 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080163.1|ensembl:ENSMUSG00000017831(gene)|ensembl:ENSMUST00000017975(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006909"(phagocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032009"(early phagosome)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043679"(axon terminus)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045121"(membrane raft)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:0098842"(postsynaptic early endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000286"(receptor internalization involved in canonical Wnt signaling pathway)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-1660499|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-983231|go:"GO:0008021"(synaptic vesicle)|entrezgene/locuslink:271457(identity) refseq:NP_796275.3|refseq:XP_006539621.1|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034816|interpro:IPR034817|interpro:IPR035005|interpro:IPR035008|interpro:IPR035979|mint:Q8R081|rcsb pdb:3S01|rcsb pdb:3TYT|reactome:R-MMU-72163|reactome:R-MMU-72203|go:"GO:1990715"(mRNA CDS binding)|ensembl:ENSMUSG00000015165(gene)|ensembl:ENSMUST00000038572(transcript)|ensembl:ENSMUST00000174548(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035770"(ribonucleoprotein granule)|go:"GO:0043484"(regulation of RNA splicing)|go:"GO:0045120"(pronucleus)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0048025"(negative regulation of mRNA splicing, via spliceosome)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0097157"(pre-mRNA intronic binding)|go:"GO:1902416"(positive regulation of mRNA binding)|entrezgene/locuslink:15388(identity) - - author-confidence:1.5609966816548528 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:TleQFpdeUdtlHFp7sMsgWpx6p8E10090 rogid:BApt4fekoyJ285Ve13kxstcLbV010090 intact-crc:517770CA6EF791FE|rigid:StsQbAJbYnPoIUw4L0w3okl8LTc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CQD1 uniprotkb:Q8C147 intact:EBI-647712|uniprotkb:Q9DCN5|uniprotkb:Q3UCX7|uniprotkb:Q4VAA1|ensembl:ENSMUSP00000017975 intact:EBI-11566633|uniprotkb:Q9DBQ2|uniprotkb:Q6PIS0|uniprotkb:Q7TMQ5|uniprotkb:Q6KAM7|uniprotkb:Q8CAP6|uniprotkb:Q8K105|ensembl:ENSMUSP00000025831 psi-mi:rab5a_mouse(display_long)|uniprotkb:Rab5a(gene name)|psi-mi:Rab5a(display_short)|uniprotkb:nnyRab5a(gene name synonym) psi-mi:dock8_mouse(display_long)|uniprotkb:Dock8(gene name)|psi-mi:Dock8(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570351|imex:IM-24977-46 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080163.1|ensembl:ENSMUSG00000017831(gene)|ensembl:ENSMUST00000017975(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006909"(phagocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032009"(early phagosome)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043679"(axon terminus)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045121"(membrane raft)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:0098842"(postsynaptic early endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000286"(receptor internalization involved in canonical Wnt signaling pathway)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-1660499|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-983231|go:"GO:0008021"(synaptic vesicle)|entrezgene/locuslink:271457(identity) refseq:NP_083061.2|ensembl:ENSMUSG00000052085(gene)|ensembl:ENSMUST00000025831(transcript)|go:"GO:0001771"(immunological synapse formation)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0031252"(cell leading edge)|go:"GO:0031256"(leading edge membrane)|go:"GO:0031258"(lamellipodium membrane)|go:"GO:0036336"(dendritic cell migration)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0061485"(memory T cell proliferation)|go:"GO:0070233"(negative regulation of T cell apoptotic process)|go:"GO:1903905"(positive regulation of establishment of T cell polarity)|go:"GO:1990869"(cellular response to chemokine)|go:"GO:2000406"(positive regulation of T cell migration)|interpro:IPR010703(Dedicator of cytokinesis)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021816|interpro:IPR026791|interpro:IPR027007|interpro:IPR027357|interpro:IPR035892|interpro:IPR037808|interpro:IPR043161|interpro:IPR043162|rcsb pdb:3VHL|rcsb pdb:7CLX|rcsb pdb:7CLY|reactome:R-MMU-9013148|reactome:R-MMU-9013149|reactome:R-MMU-9013409|reactome:R-MMU-983231|entrezgene/locuslink:76088(identity) - - author-confidence:1.0263843247015898 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:TleQFpdeUdtlHFp7sMsgWpx6p8E10090 rogid:xAjdT7y7XRy54NjvlQ6tt8Rm9ko10090 intact-crc:517770CA6EF791FE|rigid:StsQbAJbYnPoIUw4L0w3okl8LTc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CQD1 uniprotkb:P29341 intact:EBI-647712|uniprotkb:Q9DCN5|uniprotkb:Q3UCX7|uniprotkb:Q4VAA1|ensembl:ENSMUSP00000017975 intact:EBI-773902|uniprotkb:Q99L36|ensembl:ENSMUSP00000001809 psi-mi:rab5a_mouse(display_long)|uniprotkb:Rab5a(gene name)|psi-mi:Rab5a(display_short)|uniprotkb:nnyRab5a(gene name synonym) psi-mi:pabp1_mouse(display_long)|uniprotkb:Pabpc1(gene name)|psi-mi:Pabpc1(display_short)|uniprotkb:Pabp1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570351|imex:IM-24977-46 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080163.1|ensembl:ENSMUSG00000017831(gene)|ensembl:ENSMUST00000017975(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006909"(phagocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032009"(early phagosome)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043679"(axon terminus)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045121"(membrane raft)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:0098842"(postsynaptic early endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000286"(receptor internalization involved in canonical Wnt signaling pathway)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-1660499|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-983231|go:"GO:0008021"(synaptic vesicle)|entrezgene/locuslink:271457(identity) dip:DIP-32127N|refseq:NP_032800.2|refseq:XP_011243641.1|ensembl:ENSMUSG00000022283(gene)|ensembl:ENSMUST00000001809(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008143"("poly(A) binding")|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0008380"(RNA splicing)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0030027"(lamellipodium)|go:"GO:0030425"(dendrite)|go:"GO:0031047"(gene silencing by RNA)|go:"GO:0031252"(cell leading edge)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0045070"(positive regulation of viral genome replication)|go:"GO:0045202"(synapse)|go:"GO:0060213"("positive regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1900153"(positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:1990124"(messenger ribonucleoprotein complex)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000623"(negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002004(Polyadenylate-binding protein/Hyperplastic disc protein)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR006515(Polyadenylate binding protein, human types 1, 2, 3, 4)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|interpro:IPR036053|mint:P29341|reactome:R-MMU-156827|reactome:R-MMU-429947|reactome:R-MMU-450408|reactome:R-MMU-72649|reactome:R-MMU-975956|reactome:R-MMU-975957|entrezgene/locuslink:18458(identity) - - author-confidence:1.600981044912793 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:TleQFpdeUdtlHFp7sMsgWpx6p8E10090 rogid:jvlQW6kphF2tkZwK72DtAXDPHvs10090 intact-crc:517770CA6EF791FE|rigid:StsQbAJbYnPoIUw4L0w3okl8LTc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CQD1 uniprotkb:P35278 intact:EBI-647712|uniprotkb:Q9DCN5|uniprotkb:Q3UCX7|uniprotkb:Q4VAA1|ensembl:ENSMUSP00000017975 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 psi-mi:rab5a_mouse(display_long)|uniprotkb:Rab5a(gene name)|psi-mi:Rab5a(display_short)|uniprotkb:nnyRab5a(gene name synonym) psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570351|imex:IM-24977-46 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080163.1|ensembl:ENSMUSG00000017831(gene)|ensembl:ENSMUST00000017975(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006909"(phagocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032009"(early phagosome)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043679"(axon terminus)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045121"(membrane raft)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:0098842"(postsynaptic early endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000286"(receptor internalization involved in canonical Wnt signaling pathway)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-1660499|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-983231|go:"GO:0008021"(synaptic vesicle)|entrezgene/locuslink:271457(identity) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) - - author-confidence:19.196421399488415 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:TleQFpdeUdtlHFp7sMsgWpx6p8E10090 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 intact-crc:517770CA6EF791FE|rigid:StsQbAJbYnPoIUw4L0w3okl8LTc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8QZZ8 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) - - author-confidence:135.6248182 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8BFY9 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-3870049|uniprotkb:Q8C0S3|uniprotkb:Q8K2E7|ensembl:ENSMUSP00000105028 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:tnpo1_mouse(display_long)|uniprotkb:Tnpo1(gene name)|psi-mi:Tnpo1(display_short)|uniprotkb:Kpnb2(gene name synonym)|uniprotkb:Importin beta-2(gene name synonym)|uniprotkb:Karyopherin beta-2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001041732.1|refseq:NP_848831.2|refseq:XP_006517699.1|refseq:XP_006517700.1|ensembl:ENSMUSG00000009470(gene)|ensembl:ENSMUST00000109401(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0061608"(nuclear import signal receptor activity)|interpro:IPR001494(Importin-beta, N-terminal)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040122|mint:Q8BFY9|reactome:R-MMU-450513|reactome:R-MMU-5620924|entrezgene/locuslink:238799(identity) - - author-confidence:4.748143137 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:khDQjW/eY+ga9LRUpgOrxbKi6lg10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P14576 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8428927|intact:MINT-247596|uniprotkb:Q9D008|uniprotkb:Q9CWH7|uniprotkb:Q3UWX8|ensembl:ENSMUSP00000021407|ensembl:ENSMUSP00000106336|ensembl:ENSMUSP00000152764 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:srp54_mouse(display_long)|uniprotkb:Srp54(gene name)|psi-mi:Srp54(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001093579.1|refseq:NP_036029.2|ensembl:ENSMUSG00000073079(gene)|ensembl:ENSMUSG00000112449(gene)|ensembl:ENSMUST00000021407(transcript)|ensembl:ENSMUST00000110708(transcript)|ensembl:ENSMUST00000220578(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005786"(signal recognition particle, endoplasmic reticulum targeting)|go:"GO:0005829"(cytosol)|go:"GO:0006614"(SRP-dependent cotranslational protein targeting to membrane)|go:"GO:0006616"(SRP-dependent cotranslational protein targeting to membrane, translocation)|go:"GO:0008312"(7S RNA binding)|go:"GO:0016607"(nuclear speck)|go:"GO:0019003"(GDP binding)|go:"GO:0030593"(neutrophil chemotaxis)|go:"GO:0030851"(granulocyte differentiation)|go:"GO:0030942"(endoplasmic reticulum signal peptide binding)|go:"GO:0031017"(exocrine pancreas development)|go:"GO:0043021"(ribonucleoprotein complex binding)|interpro:IPR000897(Signal recognition particle, SRP54 subunit, GTPase)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004125(Signal recognition particle, SRP54 subunit, M-domain)|interpro:IPR006325(Signal recognition particle, SRP54 subunit)|interpro:IPR013822(Signal recognition particle, SRP54 subunit, helical bundle)|interpro:IPR022941|interpro:IPR027417|interpro:IPR036891|interpro:IPR042101|mint:P14576|rcsb pdb:1RY1|rcsb pdb:1WGW|reactome:R-MMU-1799339|entrezgene/locuslink:24067(identity) - - comment:mint|function:"Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein)"|author-confidence:32.3607375 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:izjPSrxa4r6+T8pmv0YJx98fdbw10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q9DC16 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8338430|intact:MINT-4094160|ensembl:ENSMUSP00000132922 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:ergi1_mouse(display_long)|uniprotkb:Ergic1(gene name)|psi-mi:Ergic1(display_short)|uniprotkb:Ergic32(gene name synonym)|uniprotkb:ER-Golgi intermediate compartment 32 kDa protein(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_080446.1|ensembl:ENSMUSG00000001576(gene)|ensembl:ENSMUST00000167662(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0016020"(membrane)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0030173"(integral component of Golgi membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|interpro:IPR012936(Protein of unknown function DUF1692)|interpro:IPR039542|mint:Q9DC16|entrezgene/locuslink:67458(identity) - - comment:mint|function:Possible role in transport between endoplasmic reticulum and Golgi|author-confidence:8.698384025 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:1sYA2jvGx2+olqrfBQmi5qUjNGg10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P15379 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-7565891|intact:EBI-15579519|uniprotkb:Q62063|uniprotkb:Q62061|uniprotkb:Q05732|intact:UNK-5943644|uniprotkb:Q9QYX8|uniprotkb:Q62408|uniprotkb:Q99J14|uniprotkb:Q64296|uniprotkb:Q61395|uniprotkb:Q62060|uniprotkb:Q62062|uniprotkb:Q62409 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:cd44_mouse(display_long)|uniprotkb:Phagocytic glycoprotein I(gene name synonym)|uniprotkb:Cd44(gene name)|psi-mi:Cd44(display_short)|uniprotkb:Ly-24(gene name synonym)|uniprotkb:Phagocytic glycoprotein 1(gene name synonym)|uniprotkb:HUTCH-I(gene name synonym)|uniprotkb:Extracellular matrix receptor III(gene name synonym)|uniprotkb:GP90 lymphocyte homing/adhesion receptor(gene name synonym)|uniprotkb:Hermes antigen(gene name synonym)|uniprotkb:Hyaluronate receptor(gene name synonym)|uniprotkb:Lymphocyte antigen 24(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001171257.1|refseq:NP_001034240.1|refseq:NP_001171258.1|refseq:NP_033981.2|refseq:NP_001171256.1|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001658"(branching involved in ureteric bud morphogenesis)|go:"GO:0002246"(wound healing involved in inflammatory response)|go:"GO:0002821"(positive regulation of adaptive immune response)|go:"GO:0002906"(negative regulation of mature B cell apoptotic process)|go:"GO:0004888"(transmembrane signaling receptor activity)|go:"GO:0005114"(type II transforming growth factor beta receptor binding)|go:"GO:0005154"(epidermal growth factor receptor binding)|go:"GO:0005540"(hyaluronic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005902"(microvillus)|go:"GO:0006954"(inflammatory response)|go:"GO:0007155"(cell adhesion)|go:"GO:0009897"(external side of plasma membrane)|go:"GO:0009986"(cell surface)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0016477"(cell migration)|go:"GO:0019221"(cytokine-mediated signaling pathway)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030214"(hyaluronan catabolic process)|go:"GO:0031175"(neuron projection development)|go:"GO:0031258"(lamellipodium membrane)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033031"(positive regulation of neutrophil apoptotic process)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034116"(positive regulation of heterotypic cell-cell adhesion)|go:"GO:0034238"(macrophage fusion)|go:"GO:0035692"(macrophage migration inhibitory factor receptor complex)|go:"GO:0042110"(T cell activation)|go:"GO:0042995"(cell projection)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043154"(negative regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0043518"(negative regulation of DNA damage response, signal transduction by p53 class mediator)|go:"GO:0044319"(wound healing, spreading of cells)|go:"GO:0044344"(cellular response to fibroblast growth factor stimulus)|go:"GO:0045590"(negative regulation of regulatory T cell differentiation)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050731"(positive regulation of peptidyl-tyrosine phosphorylation)|go:"GO:0051219"(phosphoprotein binding)|go:"GO:0060442"(branching involved in prostate gland morphogenesis)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0070487"(monocyte aggregation)|go:"GO:1900625"(positive regulation of monocyte aggregation)|go:"GO:1902166"(negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator)|go:"GO:2000392"(regulation of lamellipodium morphogenesis)|go:"GO:2000562"(negative regulation of CD4-positive, alpha-beta T cell proliferation)|interpro:IPR000538(Link)|interpro:IPR001231(CD44 antigen)|interpro:IPR016186(C-type lectin-like)|interpro:IPR016187(C-type lectin fold)|interpro:IPR043210|rcsb pdb:2JCP|rcsb pdb:2JCQ|rcsb pdb:5BZJ|rcsb pdb:2JCR|rcsb pdb:5BZK|rcsb pdb:5BZL|rcsb pdb:5BZM|rcsb pdb:5BZN|rcsb pdb:5BZO|rcsb pdb:2ZPY|rcsb pdb:5BZP|rcsb pdb:5BZQ|rcsb pdb:5BZR|rcsb pdb:5BZS|rcsb pdb:5BZT|rcsb pdb:4MRD|rcsb pdb:4MRE|rcsb pdb:4MRF|rcsb pdb:4MRG|rcsb pdb:4MRH|rcsb pdb:4NP2|rcsb pdb:4NP3|rcsb pdb:5BZC|rcsb pdb:5BZE|rcsb pdb:5BZF|rcsb pdb:5BZG|rcsb pdb:5BZH|rcsb pdb:5BZI|dip:DIP-29095N|reactome:R-MMU-1474228|reactome:R-MMU-202733|reactome:R-MMU-216083|reactome:R-MMU-2160916|reactome:R-MMU-6798695|entrezgene/locuslink:12505(identity) - - function:Main cell surface receptor for hyaluronate. Adhesion to mucosal high endothelial venule and to types I and VI collagen. Probably involved in matrix adhesion, lymphocyte activation and lymph node homing|comment:mint|author-confidence:2.902436369 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:1Rlb+aBsm9z0HJuB6Oz4Oilui1o10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q9D554 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8338145|intact:MINT-1853954|ensembl:ENSMUSP00000030734 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:sf3a3_mouse(display_long)|uniprotkb:Sf3a3(gene name)|psi-mi:Sf3a3(display_short)|uniprotkb:Sap61(gene name synonym)|uniprotkb:Spliceosome-associated protein 61(gene name synonym)|uniprotkb:SF3a60(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_083433.1|ensembl:ENSMUSG00000028902(gene)|ensembl:ENSMUST00000030734(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005686"(U2 snRNP)|go:"GO:0006397"(mRNA processing)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016607"(nuclear speck)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1903241"(U2-type prespliceosome assembly)|interpro:IPR000690(Zinc finger, C2H2-type matrin)|interpro:IPR021966|interpro:IPR024598|interpro:IPR031774|interpro:IPR031776|mint:Q9D554|reactome:R-MMU-72163|entrezgene/locuslink:75062(identity) - - function:"Subunit of the splicing factor SF3A required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex"|comment:mint|author-confidence:1.022278787 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:1uFDDd2qMaHNBnQBzY/Go+IVACc10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8C9B9 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8340028|uniprotkb:A2AJ47|uniprotkb:Q3ZTP5|uniprotkb:A2AJ48|uniprotkb:Q4V9W1|uniprotkb:Q8BMD0|uniprotkb:Q8BRG2|uniprotkb:Q8CHR5|uniprotkb:B2RS46|uniprotkb:Q6ZQD7|uniprotkb:Q3ZTP6|uniprotkb:Q05C59|uniprotkb:Q80V34|uniprotkb:Q9WV00|intact:MINT-4111472|ensembl:ENSMUSP00000084794 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:dido1_mouse(display_long)|uniprotkb:Dido1(gene name)|psi-mi:Dido1(display_short)|uniprotkb:Datf1(gene name synonym)|uniprotkb:Dio1(gene name synonym)|uniprotkb:Death-associated transcription factor 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_808520.2|refseq:NP_780760.2|refseq:NP_035935.2|refseq:XP_006500671.1|refseq:XP_006500672.1|refseq:XP_006500673.1|refseq:XP_006500674.1|refseq:XP_006500675.1|refseq:XP_006500678.1|refseq:XP_006500679.1|refseq:NP_001278361.1|refseq:NP_001278362.1|ensembl:ENSMUSG00000038914(gene)|ensembl:ENSMUST00000087517(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005819"(spindle)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0097190"(apoptotic signaling pathway)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR003618(Transcription elongation factor S-II, central region)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR012921(Spen paralogue and orthologue C-terminal)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019786|interpro:IPR019787|interpro:IPR033082|interpro:IPR036575|mint:Q8C9B9|rcsb pdb:1WEM|entrezgene/locuslink:23856(identity) - - comment:mint|function:Putative transcription factor, weakly pro-apoptotic when overexpressed|author-confidence:1.409627306 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:dMthBBfD+e96GyEkwCBsH7lsJ/810090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q99LH1 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8458780|uniprotkb:B1ASC3|intact:MINT-4103943|uniprotkb:Q8BIF8|ensembl:ENSMUSP00000030684 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:nog2_mouse(display_long)|uniprotkb:Gnl2(gene name)|psi-mi:Gnl2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_663527.2|ensembl:ENSMUSG00000028869(gene)|ensembl:ENSMUST00000030684(transcript)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR006073(GTP1/OBG)|interpro:IPR012971(NGP1, N-terminal)|interpro:IPR023179|interpro:IPR024929|interpro:IPR027417|interpro:IPR030378|mint:Q99LH1|entrezgene/locuslink:230737(identity) - - function:GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation|comment:mint|author-confidence:75.81320876 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:FFvgh3mmfxqi/0sV4eNXMbU+GdU10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q9Z110 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8440240|intact:MINT-1853829|uniprotkb:Q8BGM2|uniprotkb:Q9R1P6|ensembl:ENSMUSP00000025979 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:p5cs_mouse(display_long)|uniprotkb:Aldh18a1(gene name)|psi-mi:Aldh18a1(display_short)|uniprotkb:P5cs(gene name synonym)|uniprotkb:Pycs(gene name synonym)|uniprotkb:Aldehyde dehydrogenase family 18 member A1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_705782.2|refseq:NP_062672.2|ensembl:ENSMUSG00000025007(gene)|ensembl:ENSMUST00000025979(transcript)|go:"GO:0004349"(glutamate 5-kinase activity)|go:"GO:0004350"(glutamate-5-semialdehyde dehydrogenase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0006536"(glutamate metabolic process)|go:"GO:0006561"(proline biosynthetic process)|go:"GO:0006592"(ornithine biosynthetic process)|go:"GO:0008652"(cellular amino acid biosynthetic process)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0019240"(citrulline biosynthetic process)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0055129"(L-proline biosynthetic process)|interpro:IPR000965(Gamma-glutamyl phosphate reductase GPR)|interpro:IPR001048(Aspartate/glutamate/uridylate kinase)|interpro:IPR001057(Glutamate 5-kinase)|interpro:IPR005715(Glutamate 5-kinase, ProB-related)|interpro:IPR005766(delta l-pyrroline-5-carboxylate synthetase)|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR019797|interpro:IPR020593|interpro:IPR036393|interpro:IPR041744|mint:Q9Z110|reactome:R-MMU-8964539|entrezgene/locuslink:56454(identity) - - comment:mint|author-confidence:1.119919174 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:bzLtsuFfMe3vEyBVOmcAcLYvbVs10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8BSY0 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8366490|uniprotkb:Q9EQ64|intact:MINT-4112262|uniprotkb:Q9EPA6|uniprotkb:Q6P8S1|ensembl:ENSMUSP00000077273 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:asph_mouse(display_long)|uniprotkb:Asph(gene name)|psi-mi:Asph(display_short)|uniprotkb:Aspartate beta-hydroxylase(gene name synonym)|uniprotkb:Peptide-aspartate beta-dioxygenase(gene name synonym)|uniprotkb:Bah(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001171327.1|refseq:NP_001171323.1|refseq:NP_001171326.1|refseq:NP_001171325.1|refseq:NP_001171321.1|refseq:NP_075553.2|refseq:NP_001171324.1|refseq:NP_001277296.1|ensembl:ENSMUSG00000028207(gene)|ensembl:ENSMUST00000078139(transcript)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005886"(plasma membrane)|go:"GO:0007389"(pattern specification process)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010524"(positive regulation of calcium ion transport into cytosol)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0031585"(regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0032237"(activation of store-operated calcium channel activity)|go:"GO:0032541"(cortical endoplasmic reticulum)|go:"GO:0033017"(sarcoplasmic reticulum membrane)|go:"GO:0033198"(response to ATP)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0042264"(peptidyl-aspartic acid hydroxylation)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051480"(regulation of cytosolic calcium ion concentration)|go:"GO:0055074"(calcium ion homeostasis)|go:"GO:0060021"(roof of mouth development)|go:"GO:0060325"(face morphogenesis)|go:"GO:0062101"(peptidyl-aspartic acid 3-dioxygenase activity)|go:"GO:0070588"(calcium ion transmembrane transport)|go:"GO:0071277"(cellular response to calcium ion)|go:"GO:0090316"(positive regulation of intracellular protein transport)|go:"GO:0097202"(activation of cysteine-type endopeptidase activity)|go:"GO:1901879"(regulation of protein depolymerization)|interpro:IPR007803(Aspartyl/Asparaginyl beta-hydroxylase)|interpro:IPR007943(Aspartyl beta-hydroxylase, N-terminal)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR027443|interpro:IPR039038|mint:Q8BSY0|reactome:R-MMU-2672351|reactome:R-MMU-5578775|go:"GO:0045862"(positive regulation of proteolysis)|entrezgene/locuslink:65973(identity) - - comment:mint|function:"Specifically hydroxylates an Asp or Asn residue in certain epidermal growth factor-like (EGF) domains of a number of proteins"|author-confidence:2.316772548 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:x06lMmMmxgaETSn5iGJ/1hScfSI10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q64433 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8333593|intact:MINT-1839191|ensembl:ENSMUSP00000074724 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:ch10_mouse(display_long)|uniprotkb:Hspe1(gene name)|psi-mi:Hspe1(display_short)|uniprotkb:10 kDa chaperonin(gene name synonym)|uniprotkb:Chaperonin 10(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_032329.1|ensembl:ENSMUSG00000073676(gene)|ensembl:ENSMUST00000075242(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0046872"(metal ion binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051085"(chaperone cofactor-dependent protein refolding)|go:"GO:0051087"(chaperone binding)|interpro:IPR011032(GroES-like)|interpro:IPR018369|interpro:IPR020818|interpro:IPR037124|mint:Q64433|reactome:R-MMU-9013408|entrezgene/locuslink:15528(identity) - - function:Eukaryotic CPN10 homolog which is essential for mitochondrial protein biogenesis, together with CPN60. Binds to CPN60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter|comment:mint|author-confidence:10.21707582 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:yLxNbugE//M08qaPnactGEnVMzQ10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:O35129 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-445002|uniprotkb:O89075|uniprotkb:Q61336|ensembl:ENSMUSP00000004375 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:phb2_mouse(display_long)|uniprotkb:B-cell receptor-associated protein BAP37(gene name synonym)|uniprotkb:Repressor of estrogen receptor activity(gene name synonym)|uniprotkb:Phb2(gene name)|psi-mi:Phb2(display_short)|uniprotkb:Bap(gene name synonym)|uniprotkb:Bcap37(gene name synonym)|uniprotkb:Rea(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_031557.2|go:"GO:0046625"(sphingolipid binding)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0050821"(protein stabilization)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0060744"(mammary gland branching involved in thelarche)|go:"GO:0060749"(mammary gland alveolus development)|go:"GO:0060762"(regulation of branching involved in mammary gland duct morphogenesis)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0071300"(cellular response to retinoic acid)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071944"(cell periphery)|go:"GO:0098800"(inner mitochondrial membrane protein complex)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0140374"(antiviral innate immune response)|go:"GO:1900208"(regulation of cardiolipin metabolic process)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1904959"(regulation of cytochrome-c oxidase activity)|go:"GO:1990051"(activation of protein kinase C activity)|interpro:IPR000163(Prohibitin)|interpro:IPR001107(Band 7 protein)|interpro:IPR036013|mint:O35129|reactome:R-MMU-8949664|go:"GO:1902808"(positive regulation of cell cycle G1/S phase transition)|ensembl:ENSMUSG00000004264(gene)|ensembl:ENSMUST00000004375(transcript)|go:"GO:0000423"(mitophagy)|go:"GO:0002639"(positive regulation of immunoglobulin production)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0007202"(activation of phospholipase C activity)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009611"(response to wounding)|go:"GO:0009986"(cell surface)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016363"(nuclear matrix)|go:"GO:0023035"(CD40 signaling pathway)|go:"GO:0030424"(axon)|go:"GO:0031536"(positive regulation of exit from mitosis)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0033218"(amide binding)|go:"GO:0033600"(negative regulation of mammary gland epithelial cell proliferation)|go:"GO:0035632"(mitochondrial prohibitin complex)|go:"GO:0039520"(induction by virus of host autophagy)|go:"GO:0039529"(RIG-I signaling pathway)|go:"GO:0042113"(B cell activation)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0016477"(cell migration)|entrezgene/locuslink:12034(identity) - - author-confidence:38.10295617 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:h4pib54mBeQgOKCe/hib58LM26w10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q9EQH3 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-775825|uniprotkb:Q61123|ensembl:ENSMUSP00000034131 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:vps35_mouse(display_long)|uniprotkb:Vesicle protein sorting 35(gene name synonym)|uniprotkb:Maternal-embryonic 3(gene name synonym)|uniprotkb:Vps35(gene name)|psi-mi:Vps35(display_short)|uniprotkb:Mem3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_075373.1|dip:DIP-32210N|ensembl:ENSMUSG00000031696(gene)|ensembl:ENSMUST00000034131(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006624"(vacuolar protein processing)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007040"(lysosome organization)|go:"GO:0007416"(synapse assembly)|go:"GO:0010008"(endosome membrane)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010821"(regulation of mitochondrion organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030904"(retromer complex)|go:"GO:0030906"(retromer, cargo-selective complex)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0031648"(protein destabilization)|go:"GO:0031748"(D1 dopamine receptor binding)|go:"GO:0032268"(regulation of cellular protein metabolic process)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032463"(negative regulation of protein homooligomerization)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043653"(mitochondrial fragmentation involved in apoptotic process)|go:"GO:0045056"(transcytosis)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050882"(voluntary musculoskeletal movement)|go:"GO:0060161"(positive regulation of dopamine receptor signaling pathway)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061357"(positive regulation of Wnt protein secretion)|go:"GO:0090141"(positive regulation of mitochondrial fission)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:0090326"(positive regulation of locomotion involved in locomotory behavior)|go:"GO:0097422"(tubular endosome)|go:"GO:0098793"(presynapse)|go:"GO:0098794"(postsynapse)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099003"(vesicle-mediated transport in synapse)|go:"GO:0099073"(mitochondrion-derived vesicle)|go:"GO:0099074"(mitochondrion to lysosome transport)|go:"GO:0099639"(neurotransmitter receptor transport, endosome to plasma membrane)|go:"GO:1901215"(negative regulation of neuron death)|go:"GO:1902823"(negative regulation of late endosome to lysosome transport)|go:"GO:1902950"(regulation of dendritic spine maintenance)|go:"GO:1903181"(positive regulation of dopamine biosynthetic process)|go:"GO:1903364"(positive regulation of cellular protein catabolic process)|go:"GO:1903828"(negative regulation of protein localization)|go:"GO:1905166"(negative regulation of lysosomal protein catabolic process)|go:"GO:2000331"(regulation of terminal button organization)|interpro:IPR005378(Vacuolar protein sorting-associated protein 35)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR042491|mint:Q9EQH3|rcsb pdb:6VAB|rcsb pdb:6VAC|reactome:R-MMU-3238698|entrezgene/locuslink:65114(identity) - - author-confidence:2.875125621 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:dK5TqSajxrGKjiNwRjeZCV519XE10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P07724 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-1183810|uniprotkb:Q3TV03|uniprotkb:Q61802|uniprotkb:Q8C7C7|uniprotkb:Q8C7H3|uniprotkb:Q8CG74|ensembl:ENSMUSP00000031314 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:albu_mouse(display_long)|uniprotkb:Alb(gene name)|psi-mi:Alb(display_short)|uniprotkb:Alb1(gene name synonym)|uniprotkb:Alb-1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_033784.2|ensembl:ENSMUSG00000029368(gene)|ensembl:ENSMUST00000031314(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005504"(fatty acid binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005604"(basement membrane)|go:"GO:0005615"(extracellular space)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0015643"(toxic substance binding)|go:"GO:0019825"(oxygen binding)|go:"GO:0019899"(enzyme binding)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0046010"(positive regulation of circadian sleep/wake cycle, non-REM sleep)|go:"GO:0051087"(chaperone binding)|go:"GO:0051659"(maintenance of mitochondrion location)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072341"(modified amino acid binding)|go:"GO:0140272"(exogenous protein binding)|go:"GO:1903981"(enterobactin binding)|interpro:IPR000264(Serum albumin)|interpro:IPR014760(Serum albumin, N-terminal)|interpro:IPR020857|interpro:IPR020858|interpro:IPR021177|mint:P07724|reactome:R-MMU-114608|reactome:R-MMU-159418|reactome:R-MMU-189451|reactome:R-MMU-189483|reactome:R-MMU-2168880|reactome:R-MMU-381426|reactome:R-MMU-879518|reactome:R-MMU-8957275|reactome:R-MMU-8964058|reactome:R-MMU-9707564|entrezgene/locuslink:11657(identity) - - author-confidence:1.055123086 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:R7zO/mB332rAl8J+WrXfsHzjSYs10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P62320 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-2550316|ensembl:ENSMUSP00000020397|uniprotkb:P43331|uniprotkb:Q3TV81 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:smd3_mouse(display_long)|uniprotkb:Snrpd3(gene name)|psi-mi:Snrpd3(display_short)|uniprotkb:snRNP core protein D3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) ensembl:ENSMUSG00000020180(gene)|ensembl:ENSMUST00000020397(transcript)|go:"GO:0000243"(commitment complex)|go:"GO:0000387"(spliceosomal snRNP assembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005683"(U7 snRNP)|go:"GO:0005685"(U1 snRNP)|go:"GO:0005686"(U2 snRNP)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005697"(telomerase holoenzyme complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006479"(protein methylation)|go:"GO:0016604"(nuclear body)|go:"GO:0019899"(enzyme binding)|reactome:R-MMU-73856|reactome:R-MMU-77588|go:"GO:0034709"(methylosome)|go:"GO:0034715"(pICln-Sm protein complex)|go:"GO:0034719"(SMN-Sm protein complex)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0070034"(telomerase RNA binding)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0071208"(histone pre-mRNA DCP binding)|go:"GO:0071209"(U7 snRNA binding)|go:"GO:0097526"(spliceosomal tri-snRNP complex)|go:"GO:1990446"(U1 snRNP binding)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR027141|interpro:IPR034099|mint:P62320|reactome:R-MMU-111367|reactome:R-MMU-191859|reactome:R-MMU-72163|reactome:R-MMU-72165|refseq:NP_080371.1|entrezgene/locuslink:67332(identity) - - author-confidence:1.271110048 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:WkrSZVfVmSQrJYfy7mwp48xjsVA10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:E9QLQ7 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11568979|ensembl:ENSMUSP00000027693|ensembl:ENSMUSP00000108005 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:e9qlq7_mouse(display_long)|uniprotkb:Rab7l1(gene name synonym)|uniprotkb:Rab29(gene name)|psi-mi:Rab29(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_659124.2|ensembl:ENSMUSG00000026433(gene)|ensembl:ENSMUST00000027693(transcript)|ensembl:ENSMUST00000112386(transcript)|go:"GO:0001921"(positive regulation of receptor recycling)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005769"(early endosome)|go:"GO:0005773"(vacuole)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007030"(Golgi organization)|go:"GO:0007416"(synapse assembly)|go:"GO:0009617"(response to bacterium)|go:"GO:0010977"(negative regulation of neuron projection development)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019894"(kinesin binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042110"(T cell activation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0050862"(positive regulation of T cell receptor signaling pathway)|go:"GO:0055037"(recycling endosome)|go:"GO:0070840"(dynein complex binding)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090316"(positive regulation of intracellular protein transport)|go:"GO:1901998"(toxin transport)|go:"GO:1905279"(regulation of retrograde transport, endosome to Golgi)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|entrezgene/locuslink:226422(identity) - - author-confidence:73.60567921 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:5+/XPVrzqtcnmQbbuqN2Spz1rW810090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8CFZ4 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11566294|ensembl:ENSMUSP00000064131 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:gpc3_mouse(display_long)|uniprotkb:Gpc3(gene name)|psi-mi:Gpc3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_057906.2|ensembl:ENSMUSG00000055653(gene)|ensembl:ENSMUST00000069360(transcript)|go:"GO:0001658"(branching involved in ureteric bud morphogenesis)|go:"GO:0001822"(kidney development)|go:"GO:0005764"(lysosome)|go:"GO:0005796"(Golgi lumen)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009617"(response to bacterium)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0009948"(anterior/posterior axis specification)|go:"GO:0009986"(cell surface)|go:"GO:0010171"(body morphogenesis)|go:"GO:0010466"(negative regulation of peptidase activity)|go:"GO:0016477"(cell migration)|go:"GO:0030282"(bone mineralization)|go:"GO:0030316"(osteoclast differentiation)|go:"GO:0030324"(lung development)|go:"GO:0030513"(positive regulation of BMP signaling pathway)|go:"GO:0035116"(embryonic hindlimb morphogenesis)|go:"GO:0040008"(regulation of growth)|go:"GO:0042074"(cell migration involved in gastrulation)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0045807"(positive regulation of endocytosis)|go:"GO:0045879"(negative regulation of smoothened signaling pathway)|go:"GO:0045880"(positive regulation of smoothened signaling pathway)|go:"GO:0045926"(negative regulation of growth)|go:"GO:0046326"(positive regulation of glucose import)|go:"GO:0046658"(anchored component of plasma membrane)|go:"GO:0050680"(negative regulation of epithelial cell proliferation)|go:"GO:0060422"(peptidyl-dipeptidase inhibitor activity)|go:"GO:0060828"(regulation of canonical Wnt signaling pathway)|go:"GO:0060976"(coronary vasculature development)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0072111"(cell proliferation involved in kidney development)|go:"GO:0072138"(mesenchymal cell proliferation involved in ureteric bud development)|go:"GO:0072180"(mesonephric duct morphogenesis)|go:"GO:0072203"(cell proliferation involved in metanephros development)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:1905475"(regulation of protein localization to membrane)|go:"GO:2000050"(regulation of non-canonical Wnt signaling pathway)|go:"GO:2000096"(positive regulation of Wnt signaling pathway, planar cell polarity pathway)|interpro:IPR001863(Glypican)|interpro:IPR015501(Glypican 3)|interpro:IPR019803|reactome:R-MMU-1971475|reactome:R-MMU-2022928|reactome:R-MMU-2024096|reactome:R-MMU-381426|reactome:R-MMU-8957275|reactome:R-MMU-975634|entrezgene/locuslink:14734(identity) - - author-confidence:1.58937844 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:HmsJuKaE1Tz2SqFkBWtuN9PONDA10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q6ZPR5 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11568983|uniprotkb:Q8R0J3|uniprotkb:Q3TPP1|uniprotkb:Q8CD83|uniprotkb:Q9CX74|uniprotkb:Q3TPE0|uniprotkb:Q8CD12|uniprotkb:Q8CBJ5|ensembl:ENSMUSP00000006053 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:nsma3_mouse(display_long)|uniprotkb:Kiaa1418(gene name synonym)|uniprotkb:Neutral sphingomyelinase 3(gene name synonym)|uniprotkb:Neutral sphingomyelinase III(gene name synonym)|uniprotkb:Smpd4(gene name)|psi-mi:Smpd4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001158081.1|refseq:NP_001158082.1|refseq:NP_001158083.1|refseq:NP_084221.2|refseq:XP_006522785.1|ensembl:ENSMUSG00000005899(gene)|ensembl:ENSMUST00000006053(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0004767"(sphingomyelin phosphodiesterase activity)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005640"(nuclear outer membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006685"(sphingomyelin catabolic process)|go:"GO:0007029"(endoplasmic reticulum organization)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042383"(sarcolemma)|go:"GO:0046475"(glycerophospholipid catabolic process)|go:"GO:0046513"(ceramide biosynthetic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0050290"(sphingomyelin phosphodiesterase D activity)|interpro:IPR024129|go:"GO:0071356"(cellular response to tumor necrosis factor)|reactome:R-MMU-1660662|entrezgene/locuslink:77626(identity) - - author-confidence:1.205421451 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:Ar6EgV2x1pyN/3pkiUiOEUZhUjQ10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8BXR5 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11570410|uniprotkb:Q8BYM2 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:nalcn_mouse(display_long)|uniprotkb:Vgcnl1(gene name synonym)|uniprotkb:Voltage gated channel-like protein 1(gene name synonym)|uniprotkb:Nalcn(gene name)|psi-mi:Nalcn(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_796367.3|reactome:R-MMU-2672351|go:"GO:0005244"(voltage-gated ion channel activity)|go:"GO:0005261"(cation channel activity)|go:"GO:0005272"(sodium channel activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0022840"(leak channel activity)|go:"GO:0034765"(regulation of ion transmembrane transport)|go:"GO:0035725"(sodium ion transmembrane transport)|go:"GO:0060075"(regulation of resting membrane potential)|go:"GO:0070588"(calcium ion transmembrane transport)|go:"GO:0071805"(potassium ion transmembrane transport)|interpro:IPR005821(Ion transport)|interpro:IPR027359|interpro:IPR028823|dip:DIP-59731N|entrezgene/locuslink:338370(identity) - - author-confidence:15.45288539 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:M2wWTz5gjMr7bTngX5/jpiWuacs10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q80XK6 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11566520|uniprotkb:Q9CWK6|uniprotkb:Q8BIV0|uniprotkb:Q8BIQ4|uniprotkb:A0PJL7|uniprotkb:Q8R1H5|ensembl:ENSMUSP00000037441 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:atg2b_mouse(display_long)|uniprotkb:Atg2b(gene name)|psi-mi:Atg2b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_083930.5|ensembl:ENSMUSG00000041341(gene)|ensembl:ENSMUST00000041055(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005811"(lipid droplet)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0044805"(late nucleophagy)|go:"GO:0061709"(reticulophagy)|go:"GO:0120013"(lipid transfer activity)|interpro:IPR015412(ATG2, C-terminal)|interpro:IPR026849|interpro:IPR026854|mint:Q80XK6|entrezgene/locuslink:76559(identity) - - author-confidence:8.859927992 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:jnUVUCip0mX6qajisFBvpNEqixE10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P29341 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-773902|uniprotkb:Q99L36|ensembl:ENSMUSP00000001809 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:pabp1_mouse(display_long)|uniprotkb:Pabpc1(gene name)|psi-mi:Pabpc1(display_short)|uniprotkb:Pabp1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) dip:DIP-32127N|refseq:NP_032800.2|refseq:XP_011243641.1|ensembl:ENSMUSG00000022283(gene)|ensembl:ENSMUST00000001809(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008143"("poly(A) binding")|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0008380"(RNA splicing)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0030027"(lamellipodium)|go:"GO:0030425"(dendrite)|go:"GO:0031047"(gene silencing by RNA)|go:"GO:0031252"(cell leading edge)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0045070"(positive regulation of viral genome replication)|go:"GO:0045202"(synapse)|go:"GO:0060213"("positive regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1900153"(positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:1990124"(messenger ribonucleoprotein complex)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000623"(negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002004(Polyadenylate-binding protein/Hyperplastic disc protein)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR006515(Polyadenylate binding protein, human types 1, 2, 3, 4)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|interpro:IPR036053|mint:P29341|reactome:R-MMU-156827|reactome:R-MMU-429947|reactome:R-MMU-450408|reactome:R-MMU-72649|reactome:R-MMU-975956|reactome:R-MMU-975957|entrezgene/locuslink:18458(identity) - - author-confidence:1.035844911 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:jvlQW6kphF2tkZwK72DtAXDPHvs10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8C4R2 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11570418 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:q8c4r2_mouse(display_long)|uniprotkb:Prkg2(gene name)|psi-mi:Prkg2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) interpro:IPR000595(Cyclic nucleotide-binding)|interpro:IPR000719(Protein kinase, core)|interpro:IPR000961(Protein kinase, C-terminal)|interpro:IPR002374(cGMP-dependent protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR014710(RmlC-like jelly roll fold)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR018488|interpro:IPR018490|refseq:NP_032952.3|go:"GO:0004692"(cGMP-dependent protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0030553"(cGMP binding)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR035014|entrezgene/locuslink:19092(identity) - - author-confidence:1.183465752 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:Z1HKH74kbvmfG6gbtRcxbECU/eg10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:O55222 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-6690138|uniprotkb:Q78KK2|ensembl:ENSMUSP00000033182|ensembl:ENSMUSP00000130341 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:ilk_mouse(display_long)|uniprotkb:59 kDa serine/threonine-protein kinase(gene name synonym)|uniprotkb:Beta-integrin-linked kinase(gene name synonym)|uniprotkb:ILK-1(gene name synonym)|uniprotkb:ILK-2(gene name synonym)|uniprotkb:ILK1(gene name synonym)|uniprotkb:ILK2(gene name synonym)|uniprotkb:p59ILK(gene name synonym)|uniprotkb:Ilk(gene name)|psi-mi:Ilk(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001155196.1|refseq:NP_034692.2|ensembl:ENSMUSG00000030890(gene)|ensembl:ENSMUST00000033182(transcript)|ensembl:ENSMUST00000163389(transcript)|go:"GO:0000902"(cell morphogenesis)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001658"(branching involved in ureteric bud morphogenesis)|go:"GO:0001725"(stress fiber)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0001954"(positive regulation of cell-matrix adhesion)|go:"GO:0003151"(outflow tract morphogenesis)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005178"(integrin binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005925"(focal adhesion)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007160"(cell-matrix adhesion)|go:"GO:0007229"(integrin-mediated signaling pathway)|go:"GO:0007569"(cell aging)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0009967"(positive regulation of signal transduction)|go:"GO:0010667"(negative regulation of cardiac muscle cell apoptotic process)|go:"GO:0010761"(fibroblast migration)|go:"GO:0014044"(Schwann cell development)|go:"GO:0014912"(negative regulation of smooth muscle cell migration)|go:"GO:0017124"(SH3 domain binding)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021675"(nerve development)|go:"GO:0022011"(myelination in peripheral nervous system)|go:"GO:0030017"(sarcomere)|go:"GO:0030027"(lamellipodium)|go:"GO:0030030"(cell projection organization)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030424"(axon)|go:"GO:0030513"(positive regulation of BMP signaling pathway)|go:"GO:0032288"(myelin assembly)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042327"(positive regulation of phosphorylation)|go:"GO:0043034"(costamere)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043195"(terminal bouton)|go:"GO:0043198"(dendritic shaft)|go:"GO:0043406"(positive regulation of MAP kinase activity)|go:"GO:0043410"(positive regulation of MAPK cascade)|go:"GO:0043491"(protein kinase B signaling)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045197"(establishment or maintenance of epithelial cell apical/basal polarity)|go:"GO:0045663"(positive regulation of myoblast differentiation)|go:"GO:0045669"(positive regulation of osteoblast differentiation)|go:"GO:0045773"(positive regulation of axon extension)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0048662"(negative regulation of smooth muscle cell proliferation)|go:"GO:0048812"(neuron projection morphogenesis)|go:"GO:0043025"(neuronal cell body)|go:"GO:0050772"(positive regulation of axonogenesis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:0097435"(supramolecular fiber organization)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1900026"(positive regulation of substrate adhesion-dependent cell spreading)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:2000178"(negative regulation of neural precursor cell proliferation)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001245(Tyrosine protein kinase)|interpro:IPR002110(Ankyrin)|interpro:IPR011009(Protein kinase-like)|interpro:IPR020683|interpro:IPR035692|interpro:IPR036770|mint:O55222|reactome:R-MMU-446343|reactome:R-MMU-446353|dip:DIP-41971N|entrezgene/locuslink:16202(identity) - - author-confidence:1.153120476 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:9kMagkwUrtq1XaI+9PXPJ21hHY810090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8CDG3 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-646144|uniprotkb:Q7TMU9|uniprotkb:Q8BP90 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:vcip1_mouse(display_long)|uniprotkb:Valosin-containing protein p97/p47 complex-interacting protein p135(gene name synonym)|uniprotkb:Valosin-containing protein p97/p47 complex-interacting protein 1(gene name synonym)|uniprotkb:Vcpip1(gene name)|psi-mi:Vcpip1(display_short)|uniprotkb:Vcip135(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) interpro:IPR029071|refseq:NP_775619.2|interpro:IPR003323(Ovarian tumour, otubain)|mint:Q8CDG3|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005795"(Golgi stack)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007030"(Golgi organization)|go:"GO:0016320"(endoplasmic reticulum membrane fusion)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0035871"(protein K11-linked deubiquitination)|go:"GO:0045202"(synapse)|go:"GO:0071108"(protein K48-linked deubiquitination)|go:"GO:0090168"(Golgi reassembly)|go:"GO:0106300"(protein-DNA covalent cross-linking repair)|go:"GO:1905634"(regulation of protein localization to chromatin)|reactome:R-MMU-5689896|interpro:IPR039087|entrezgene/locuslink:70675(identity) - - author-confidence:5.863599771 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:jTwHlp3wXtIw4o5+Oqvb47HbKEk10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q3UNW5 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-5691372|uniprotkb:Q99PF2|uniprotkb:Q14AW3|ensembl:ENSMUSP00000027629 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:tf2l1_mouse(display_long)|uniprotkb:Tfcp2l1(gene name)|psi-mi:Tfcp2l1(display_short)|uniprotkb:CP2-related transcriptional repressor 1(gene name synonym)|uniprotkb:Crtr1(gene name synonym)|uniprotkb:Tcfcp2l1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_076244.2|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0002070"(epithelial cell maturation)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007028"(cytoplasm organization)|go:"GO:0007431"(salivary gland development)|go:"GO:0008340"(determination of adult lifespan)|go:"GO:0016020"(membrane)|go:"GO:0045927"(positive regulation of growth)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR007604(CP2 transcription factor)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR037598|interpro:IPR041418|mint:Q3UNW5|ensembl:ENSMUSG00000026380(gene)|ensembl:ENSMUST00000027629(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000902"(cell morphogenesis)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|entrezgene/locuslink:81879(identity) - - author-confidence:1.382138057 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:QtzNiWQU27XK2s0idF91/IAVi0E10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P62196 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-357713|uniprotkb:O35051|uniprotkb:P47210|uniprotkb:Q3UL51|uniprotkb:P52915|uniprotkb:P52916|uniprotkb:Q9CWN5|ensembl:ENSMUSP00000021049 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:prs8_mouse(display_long)|uniprotkb:Psmc5(gene name)|psi-mi:Psmc5(display_short)|uniprotkb:Sug1(gene name synonym)|uniprotkb:Proteasome 26S subunit ATPase 5(gene name synonym)|uniprotkb:Proteasome subunit p45(gene name synonym)|uniprotkb:p45/SUG(gene name synonym)|uniprotkb:26S proteasome AAA-ATPase subunit RPT6(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_032976.1|ensembl:ENSMUSG00000020708(gene)|ensembl:ENSMUST00000021049(transcript)|go:"GO:0000502"(proteasome complex)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005675"(transcription factor TFIIH holo complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0005838"(proteasome regulatory particle)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008540"(proteasome regulatory particle, base subcomplex)|go:"GO:0016234"(inclusion body)|go:"GO:0017025"(TBP-class protein binding)|go:"GO:0022624"(proteasome accessory complex)|reactome:R-MMU-4641257|reactome:R-MMU-4641258|reactome:R-MMU-5358346|reactome:R-MMU-5607761|reactome:R-MMU-5607764|reactome:R-MMU-5610780|reactome:R-MMU-5610785|reactome:R-MMU-5632684|reactome:R-MMU-5658442|reactome:R-MMU-5668541|reactome:R-MMU-5676590|reactome:R-MMU-5687128|reactome:R-MMU-5689603|reactome:R-MMU-5689880|reactome:R-MMU-68827|reactome:R-MMU-68949|reactome:R-MMU-69017|reactome:R-MMU-69481|reactome:R-MMU-69601|reactome:R-MMU-75815|reactome:R-MMU-8852276|reactome:R-MMU-8854050|reactome:R-MMU-8932339|reactome:R-MMU-8939236|reactome:R-MMU-8939902|reactome:R-MMU-8941858|reactome:R-MMU-8948751|reactome:R-MMU-8951664|reactome:R-MMU-9020702|reactome:R-MMU-983168|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031531"(thyrotropin-releasing hormone receptor binding)|go:"GO:0031595"(nuclear proteasome complex)|go:"GO:0031597"(cytosolic proteasome complex)|go:"GO:0036402"(proteasome-activating activity)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)|go:"GO:0050804"(modulation of chemical synaptic transmission)|go:"GO:0090261"(positive regulation of inclusion body assembly)|go:"GO:0098794"(postsynapse)|go:"GO:0140296"(general transcription initiation factor binding)|go:"GO:0140297"(DNA-binding transcription factor binding)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR005937(26S proteasome subunit P45)|interpro:IPR027417|interpro:IPR032501|interpro:IPR041569|mint:P62196|reactome:R-MMU-1169091|reactome:R-MMU-1234176|reactome:R-MMU-1236978|reactome:R-MMU-174084|reactome:R-MMU-174154|reactome:R-MMU-174178|reactome:R-MMU-174184|reactome:R-MMU-187577|reactome:R-MMU-195253|reactome:R-MMU-202424|reactome:R-MMU-2467813|reactome:R-MMU-2871837|reactome:R-MMU-349425|reactome:R-MMU-350562|reactome:R-MMU-382556|reactome:R-MMU-450408|reactome:R-MMU-4608870|dip:DIP-35174N|entrezgene/locuslink:19184(identity) - - author-confidence:1.063869665 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:zgUTOX/O4m86U/Nf+pnT7u0m0gY10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q9WV55 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-645974|uniprotkb:Q9QY77|uniprotkb:Q3TJM1|ensembl:ENSMUSP00000024897 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:vapa_mouse(display_long)|uniprotkb:33 kDa VAMP-associated protein(gene name synonym)|uniprotkb:Vapa(gene name)|psi-mi:Vapa(display_short)|uniprotkb:Vap33(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_038961.2|ensembl:ENSMUSG00000024091(gene)|ensembl:ENSMUST00000024897(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0008017"(microtubule binding)|go:"GO:0008219"(cell death)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031175"(neuron projection development)|go:"GO:0031965"(nuclear membrane)|go:"GO:0031982"(vesicle)|go:"GO:0033149"(FFAT motif binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0044791"(obsolete positive regulation by host of viral release from host cell)|go:"GO:0044828"(negative regulation by host of viral genome replication)|go:"GO:0044829"(positive regulation by host of viral genome replication)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0070972"(protein localization to endoplasmic reticulum)|go:"GO:0090114"(COPII-coated vesicle budding)|interpro:IPR000535(Major sperm protein)|interpro:IPR008962(PapD-like)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR016763(Vesicle-associated membrane protein)|mint:Q9WV55|rcsb pdb:2CRI|reactome:R-MMU-1660661|reactome:R-MMU-6798695|reactome:R-MMU-9609523|entrezgene/locuslink:30960(identity) - - author-confidence:1.156512007 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:LQV6uN7oD/EpHQvexl/pGkG6bmE10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q3UA37 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11570406 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:qric1_mouse(display_long)|uniprotkb:Qrich1(gene name)|psi-mi:Qrich1(display_short)|uniprotkb:Glutamine-rich protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) interpro:IPR021893|refseq:NP_001107591.1|refseq:NP_780352.2|mint:Q3UA37|go:"GO:0001822"(kidney development)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0036499"(PERK-mediated unfolded protein response)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0070059"(intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress)|go:"GO:0140467"(integrated stress response signaling)|entrezgene/locuslink:69232(identity) - - author-confidence:12.21433047 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:lrPKPO53O+39Aj8JAW5xKfElPEc10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P67778 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-298507|uniprotkb:P24142|uniprotkb:Q3UB75|uniprotkb:Q5SQG4|ensembl:ENSMUSP00000119603 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:phb_mouse(display_long)|uniprotkb:Phb(gene name)|psi-mi:Phb(display_short)|uniprotkb:B-cell receptor-associated protein 32(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) ensembl:ENSMUSG00000038845(gene)|ensembl:ENSMUST00000125172(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001541"(ovarian follicle development)|go:"GO:0001552"(ovarian follicle atresia)|go:"GO:0001850"(complement component C3a binding)|go:"GO:0001851"(complement component C3b binding)|go:"GO:0002639"(positive regulation of immunoglobulin production)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007202"(activation of phospholipase C activity)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009986"(cell surface)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0010944"(negative regulation of transcription by competitive promoter binding)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016575"(histone deacetylation)|go:"GO:0019899"(enzyme binding)|go:"GO:0023035"(CD40 signaling pathway)|go:"GO:0030061"(mitochondrial crista)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0031100"(animal organ regeneration)|go:"GO:0031315"(extrinsic component of mitochondrial outer membrane)|go:"GO:0031871"(proteinase activated receptor binding)|go:"GO:0032740"(positive regulation of interleukin-17 production)|go:"GO:0035632"(mitochondrial prohibitin complex)|go:"GO:0035902"(response to immobilization stress)|go:"GO:0042113"(B cell activation)|go:"GO:0042177"(negative regulation of protein catabolic process)|go:"GO:0042493"|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0039529"(RIG-I signaling pathway)|go:"GO:0044830"(modulation by host of viral RNA genome replication)|go:"GO:0045471"(response to ethanol)|go:"GO:0045745"(positive regulation of G protein-coupled receptor signaling pathway)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045917"(positive regulation of complement activation)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0050821"(protein stabilization)|go:"GO:0050847"(progesterone receptor signaling pathway)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0060766"(negative regulation of androgen receptor signaling pathway)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0071354"(cellular response to interleukin-6)|go:"GO:0071897"(DNA biosynthetic process)|go:"GO:0072538"(T-helper 17 type immune response)|go:"GO:0098891"(extrinsic component of presynaptic active zone membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0140374"(antiviral innate immune response)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1990051"(activation of protein kinase C activity)|go:"GO:2000323"(negative regulation of glucocorticoid receptor signaling pathway)|interpro:IPR000163(Prohibitin)|interpro:IPR001107(Band 7 protein)|interpro:IPR036013|mint:P67778|reactome:R-MMU-5673000|reactome:R-MMU-8949664|refseq:NP_032857.1|entrezgene/locuslink:18673(identity) - - author-confidence:38.45281934 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:eUStcZ9Mu7+7MHr/GJXFwwJY/Fc10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q61753 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-1633989|uniprotkb:Q3TEE5|uniprotkb:Q75SV9|uniprotkb:Q8C603|ensembl:ENSMUSP00000064755 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:sera_mouse(display_long)|uniprotkb:Phgdh(gene name)|psi-mi:Phgdh(display_short)|uniprotkb:A10(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_058662.2|ensembl:ENSMUSG00000053398(gene)|ensembl:ENSMUST00000065793(transcript)|go:"GO:0004617"(phosphoglycerate dehydrogenase activity)|go:"GO:0006541"(glutamine metabolic process)|go:"GO:0006544"(glycine metabolic process)|go:"GO:0006563"(L-serine metabolic process)|go:"GO:0006564"(L-serine biosynthetic process)|go:"GO:0006566"(threonine metabolic process)|go:"GO:0009448"(gamma-aminobutyric acid metabolic process)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0019530"(taurine metabolic process)|go:"GO:0021510"(spinal cord development)|go:"GO:0021782"(glial cell development)|go:"GO:0021915"(neural tube development)|go:"GO:0022008"(neurogenesis)|go:"GO:0031175"(neuron projection development)|go:"GO:0043209"(myelin sheath)|go:"GO:0051287"(NAD binding)|go:"GO:0070314"(G1 to G0 transition)|interpro:IPR006139(D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region)|interpro:IPR006140(D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding)|interpro:IPR006236(D-3-phosphoglycerate dehydrogenase)|interpro:IPR029009|interpro:IPR029752|interpro:IPR029753|interpro:IPR036291|mint:Q61753|reactome:R-MMU-977347|entrezgene/locuslink:236539(identity) - - author-confidence:1.667740651 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:66i2iIx5qSIN6BkqSPF14+UqDIA10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P11276 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-641955|uniprotkb:G5E8B8|uniprotkb:Q61567|uniprotkb:Q61568|uniprotkb:Q61569|uniprotkb:Q64233|uniprotkb:Q80UI4|ensembl:ENSMUSP00000054499 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:finc_mouse(display_long)|uniprotkb:Fn1(gene name)|psi-mi:Fn1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_034363.1|go:"GO:0005604"(basement membrane)|go:"GO:0005615"(extracellular space)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0006953"(acute-phase response)|go:"GO:0007044"(cell-substrate junction assembly)|go:"GO:0007155"(cell adhesion)|go:"GO:0007160"(cell-matrix adhesion)|go:"GO:0007161"(calcium-independent cell-matrix adhesion)|go:"GO:0007229"(integrin-mediated signaling pathway)|go:"GO:0007399"(nervous system development)|go:"GO:0007507"(heart development)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008201"(heparin binding)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008347"(glial cell migration)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0014068"(positive regulation of phosphatidylinositol 3-kinase signaling)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0016504"(peptidase activator activity)|go:"GO:0018149"(peptide cross-linking)|go:"GO:0019899"(enzyme binding)|go:"GO:0030198"(extracellular matrix organization)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0031012"(extracellular matrix)|go:"GO:0032966"(negative regulation of collagen biosynthetic process)|go:"GO:0033622"(integrin activation)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0035987"(endodermal cell differentiation)|go:"GO:0042060"(wound healing)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043394"(proteoglycan binding)|go:"GO:0045340"(mercury ion binding)|go:"GO:0045773"(positive regulation of axon extension)|go:"GO:0048146"(positive regulation of fibroblast proliferation)|go:"GO:0050921"(positive regulation of chemotaxis)|go:"GO:0051087"(chaperone binding)|go:"GO:0051702"(biological process involved in interaction with symbiont)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070062"(extracellular exosome)|go:"GO:0070372"(regulation of ERK1 and ERK2 cascade)|go:"GO:0070527"(platelet aggregation)|go:"GO:0071288"(cellular response to mercury ion)|go:"GO:0071347"(cellular response to interleukin-1)|go:"GO:0071635"(negative regulation of transforming growth factor beta production)|go:"GO:0072378"(blood coagulation, fibrin clot formation)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:1901166"(neural crest cell migration involved in autonomic nervous system development)|go:"GO:1904237"(positive regulation of substrate-dependent cell migration, cell attachment to substrate)|interpro:IPR000083(Fibronectin, type I)|interpro:IPR000562(Type II fibronectin, collagen-binding)|interpro:IPR003961(Fibronectin, type III)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR013806(Kringle-like fold)|interpro:IPR036116|interpro:IPR036943|mint:P11276|rcsb pdb:1MFN|rcsb pdb:2MFN|reactome:R-MMU-114608|reactome:R-MMU-1474228|reactome:R-MMU-1474244|reactome:R-MMU-1566977|reactome:R-MMU-202733|reactome:R-MMU-2129379|reactome:R-MMU-216083|reactome:R-MMU-3000170|reactome:R-MMU-3000171|reactome:R-MMU-3000178|reactome:R-MMU-354192|reactome:R-MMU-354194|reactome:R-MMU-372708|reactome:R-MMU-381426|reactome:R-MMU-5674135|reactome:R-MMU-8874081|reactome:R-MMU-8957275|ensembl:ENSMUSG00000026193(gene)|ensembl:ENSMUST00000055226(transcript)|go:"GO:0001525"(angiogenesis)|go:"GO:0001775"(cell activation)|go:"GO:0001932"(regulation of protein phosphorylation)|go:"GO:0002020"(protease binding)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005178"(integrin binding)|go:"GO:0005577"(fibrinogen complex)|entrezgene/locuslink:14268(identity) - - author-confidence:31.2931193 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:qndGPG6vmzpIIkDuO1BrVRI1oPg10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:B2RXR6 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11566298|uniprotkb:B2RXN6|uniprotkb:B7ZWK8|ensembl:ENSMUSP00000137616 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:anr44_mouse(display_long)|uniprotkb:Ankyrin repeat domain-containing protein 44(gene name synonym)|uniprotkb:Ankrd44(gene name)|psi-mi:Ankrd44(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001074902.2|ensembl:ENSMUSG00000052331(gene)|ensembl:ENSMUST00000179030(transcript)|interpro:IPR002110(Ankyrin)|interpro:IPR020683|interpro:IPR036770|entrezgene/locuslink:329154(identity) - - author-confidence:1.036201914 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:u2gh8Mr3OLcC72DfwHC0bMCFj3c10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q01965 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11569501|uniprotkb:Q9ES35|uniprotkb:Q9ES36|uniprotkb:Q9ES29|ensembl:ENSMUSP00000069319 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:ly9_mouse(display_long)|uniprotkb:Cell surface molecule Ly-9(gene name synonym)|uniprotkb:Ly-9(gene name synonym)|uniprotkb:Lymphocyte antigen 9(gene name synonym)|uniprotkb:SLAM family member 3(gene name synonym)|uniprotkb:Signaling lymphocytic activation molecule 3(gene name synonym)|uniprotkb:Ly9(gene name)|psi-mi:Ly9(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001264897.1|refseq:NP_032560.2|ensembl:ENSMUSG00000004707(gene)|ensembl:ENSMUST00000068878(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0007155"(cell adhesion)|go:"GO:0009986"(cell surface)|go:"GO:0016021"(integral component of membrane)|go:"GO:0032740"(positive regulation of interleukin-17 production)|go:"GO:0045087"(innate immune response)|go:"GO:0072540"(T-helper 17 cell lineage commitment)|interpro:IPR003599(Immunoglobulin subtype)|interpro:IPR007110(Immunoglobulin-like)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR036179|entrezgene/locuslink:17085(identity) - - author-confidence:1.031560872 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:u1JQR4GuNJZc0Cu1WPQRzpiPPJA10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P26443 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-773329|uniprotkb:Q8C273|ensembl:ENSMUSP00000022322 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:dhe3_mouse(display_long)|uniprotkb:Glud1(gene name)|psi-mi:Glud1(display_short)|uniprotkb:Glud(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_032159.1|ensembl:ENSMUSG00000021794(gene)|ensembl:ENSMUST00000022322(transcript)|go:"GO:0004352"("glutamate dehydrogenase (NAD+) activity")|go:"GO:0004353"("glutamate dehydrogenase [NAD(P)+] activity")|go:"GO:0004354"("glutamate dehydrogenase (NADP+) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006537"(glutamate biosynthetic process)|go:"GO:0006538"(glutamate catabolic process)|go:"GO:0006541"(glutamine metabolic process)|go:"GO:0007616"(long-term memory)|go:"GO:0010044"(response to aluminum ion)|go:"GO:0019899"(enzyme binding)|go:"GO:0021549"(cerebellum development)|go:"GO:0032024"(positive regulation of insulin secretion)|go:"GO:0043531"(ADP binding)|go:"GO:0070403"(NAD+ binding)|go:"GO:0070728"(leucine binding)|go:"GO:0072350"(tricarboxylic acid metabolic process)|interpro:IPR006095(Glutamate/phenylalanine/leucine/valine dehydrogenase)|interpro:IPR006096(Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal)|interpro:IPR006097(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region)|interpro:IPR033524|interpro:IPR033922|interpro:IPR036291|mint:P26443|reactome:R-MMU-2151201|reactome:R-MMU-8964539|entrezgene/locuslink:14661(identity) - - author-confidence:1.949059207 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:HbPeUm/tpMD6GrgM/863swTQqGA10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P16858 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-444871|uniprotkb:Q0QEU0|uniprotkb:Q3THM2|uniprotkb:Q3TUI2|uniprotkb:Q3UMT2|uniprotkb:Q4V783|uniprotkb:Q569X2|uniprotkb:Q569X5|uniprotkb:Q5U410|uniprotkb:A6H6A8|ensembl:ENSMUSP00000073289|ensembl:ENSMUSP00000113213 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:g3p_mouse(display_long)|uniprotkb:Gapdh(gene name)|psi-mi:Gapdh(display_short)|uniprotkb:Gapd(gene name synonym)|uniprotkb:Peptidyl-cysteine S-nitrosylase GAPDH(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_032110.1|refseq:XP_001476757.1|ensembl:ENSMUSG00000057666(gene)|ensembl:ENSMUST00000073605(transcript)|ensembl:ENSMUST00000118875(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0001819"(positive regulation of cytokine production)|go:"GO:0004365"("glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity")|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005811"(lipid droplet)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005975"(carbohydrate metabolic process)|go:"GO:0006094"(gluconeogenesis)|go:"GO:0006096"(glycolytic process)|go:"GO:0006915"(apoptotic process)|go:"GO:0008017"(microtubule binding)|go:"GO:0010951"(negative regulation of endopeptidase activity)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019828"(aspartic-type endopeptidase inhibitor activity)|go:"GO:0019899"(enzyme binding)|go:"GO:0019933"(cAMP-mediated signaling)|go:"GO:0031640"(killing of cells of another organism)|go:"GO:0031906"(late endosome lumen)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032481"(positive regulation of type I interferon production)|go:"GO:0035605"(peptidyl-cysteine S-nitrosylase activity)|go:"GO:0035606"(peptidyl-cysteine S-trans-nitrosylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043209"(myelin sheath)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0050661"(NADP binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0050832"(defense response to fungus)|go:"GO:0051287"(NAD binding)|go:"GO:0051402"(neuron apoptotic process)|go:"GO:0051873"(killing by host of symbiont cells)|go:"GO:0060359"(response to ammonium ion)|go:"GO:0061844"(antimicrobial humoral immune response mediated by antimicrobial peptide)|go:"GO:0071346"(cellular response to interferon-gamma)|go:"GO:0097452"(GAIT complex)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099092"(postsynaptic density, intracellular component)|go:"GO:1905460"(negative regulation of vascular associated smooth muscle cell apoptotic process)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR006424(Glyceraldehyde-3-phosphate dehydrogenase, type I)|interpro:IPR020828|interpro:IPR020829|interpro:IPR020830|interpro:IPR020831|interpro:IPR036291|mint:P16858|rcsb pdb:6LGJ|rcsb pdb:6LGK|rcsb pdb:6LGM|reactome:R-MMU-70171|reactome:R-MMU-70263|refseq:NP_001276655.1|dip:DIP-31404N|entrezgene/locuslink:14433(identity) - - author-confidence:10.93715136 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:SkcdXZ+143DDQFioo6mNWNpCLTI10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q5DU37 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11569031|uniprotkb:Q923B4|uniprotkb:B9EJ71|uniprotkb:Q8CDR8|uniprotkb:Q3TEM9|uniprotkb:Q3V1N3|uniprotkb:Q8BY74|ensembl:ENSMUSP00000021547 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:zfy26_mouse(display_long)|uniprotkb:Kiaa0321(gene name synonym)|uniprotkb:Zfyve26(gene name)|psi-mi:Zfyve26(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001008550.1|ensembl:ENSMUSG00000066440(gene)|ensembl:ENSMUST00000021547(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0030496"(midbody)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0046872"(metal ion binding)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR028730|entrezgene/locuslink:211978(identity) - - author-confidence:1.563674206 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:g7K/XypoTRwki8oHTYjAnU447Y010090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:F8WGW3 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11569048|ensembl:ENSMUSP00000092810 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:f8wgw3_mouse(display_long)|uniprotkb:Srbd1(gene name)|psi-mi:Srbd1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_084409.3|ensembl:ENSMUSG00000024135(gene)|ensembl:ENSMUST00000095187(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006139"(nucleobase-containing compound metabolic process)|interpro:IPR003029(S1, RNA binding)|interpro:IPR006641(Resolvase, RNase H-like fold)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR018974|interpro:IPR022967|interpro:IPR023319|interpro:IPR023323|interpro:IPR032639|interpro:IPR037027|interpro:IPR041692|interpro:IPR044146|entrezgene/locuslink:78586(identity) - - author-confidence:1.142410379 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:u7o4S3hy4AeslIj/Nqt5s+yCRPY10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P68040 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-296749|ensembl:ENSMUSP00000020640|uniprotkb:P25388|uniprotkb:P99049|intact:EBI-1183965|uniprotkb:Q3THP0|uniprotkb:Q3THY7|uniprotkb:Q3TKQ0|uniprotkb:Q3TW88|uniprotkb:Q5NCC5|uniprotkb:Q5NCC6|uniprotkb:Q9CSQ0|uniprotkb:Q9ERM6 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:rack1_mouse(display_long)|uniprotkb:p205(gene name synonym)|uniprotkb:Receptor of activated protein kinase C 1(gene name synonym)|uniprotkb:12-3(gene name synonym)|uniprotkb:Gnb2-rs1(gene name synonym)|uniprotkb:Gnb2l1(gene name synonym)|uniprotkb:Guanine nucleotide-binding protein subunit beta-2-like 1(gene name synonym)|uniprotkb:Rack1(gene name)|psi-mi:Rack1(display_short)|uniprotkb:Receptor for activated C kinase(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) go:"GO:1903076"(regulation of protein localization to plasma membrane)|go:"GO:1903208"(negative regulation of hydrogen peroxide-induced neuron death)|go:"GO:1990630"(IRE1-RACK1-PP2A complex)|go:"GO:2000114"(regulation of establishment of cell polarity)|go:"GO:2000543"(positive regulation of gastrulation)|go:"GO:2001244"(positive regulation of intrinsic apoptotic signaling pathway)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|mint:P68040|reactome:R-MMU-5357905|reactome:R-MMU-5357956|reactome:R-MMU-5626978|go:"GO:0072344"(rescue of stalled ribosome)|ensembl:ENSMUSG00000020372(gene)|ensembl:ENSMUST00000020640(transcript)|go:"GO:0001891"(phagocytic cup)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0005080"(protein kinase C binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006919"(activation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0007049"(cell cycle)|go:"GO:0007369"(gastrulation)|go:"GO:0008104"(protein localization)|go:"GO:0008200"(ion channel inhibitor activity)|go:"GO:0008656"(cysteine-type endopeptidase activator activity involved in apoptotic process)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0015935"(small ribosomal subunit)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019899"(enzyme binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0030178"(negative regulation of Wnt signaling pathway)|go:"GO:0030292"(protein tyrosine kinase inhibitor activity)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0030332"(cyclin binding)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0031334"(positive regulation of protein-containing complex assembly)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032436"(positive regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0006412"(translation)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0038023"(signaling receptor activity)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042998"(positive regulation of Golgi to plasma membrane protein transport)|go:"GO:0043005"(neuron projection)|go:"GO:0043022"(ribosome binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043204"(perikaryon)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0043473"(pigmentation)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0033137"(negative regulation of peptidyl-serine phosphorylation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0044297"(cell body)|go:"GO:0045879"(negative regulation of smoothened signaling pathway)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048511"(rhythmic process)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051302"(regulation of cell division)|go:"GO:0051343"(positive regulation of cyclic-nucleotide phosphodiesterase activity)|go:"GO:0051434"(BH3 domain binding)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051898"(negative regulation of protein kinase B signaling)|go:"GO:0051901"(positive regulation of mitochondrial depolarization)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0071363"(cellular response to growth factor stimulus)|refseq:NP_032169.1|entrezgene/locuslink:14694(identity) - - author-confidence:1.961018816 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:LXHlhPtxUzHJNncoPteGw2iXsFg10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8R081 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-647483|uniprotkb:O54789|uniprotkb:Q8K0S7|uniprotkb:Q499X2|ensembl:ENSMUSP00000049407|ensembl:ENSMUSP00000133728 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:hnrpl_mouse(display_long)|uniprotkb:Hnrpl(gene name synonym)|uniprotkb:Hnrnpl(gene name)|psi-mi:Hnrnpl(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_796275.3|refseq:XP_006539621.1|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034816|interpro:IPR034817|interpro:IPR035005|interpro:IPR035008|interpro:IPR035979|mint:Q8R081|rcsb pdb:3S01|rcsb pdb:3TYT|reactome:R-MMU-72163|reactome:R-MMU-72203|go:"GO:1990715"(mRNA CDS binding)|ensembl:ENSMUSG00000015165(gene)|ensembl:ENSMUST00000038572(transcript)|ensembl:ENSMUST00000174548(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035770"(ribonucleoprotein granule)|go:"GO:0043484"(regulation of RNA splicing)|go:"GO:0045120"(pronucleus)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0048025"(negative regulation of mRNA splicing, via spliceosome)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0097157"(pre-mRNA intronic binding)|go:"GO:1902416"(positive regulation of mRNA binding)|entrezgene/locuslink:15388(identity) - - author-confidence:1.275394087 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:BApt4fekoyJ285Ve13kxstcLbV010090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P57784 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-6877081|ensembl:ENSMUSP00000117947|uniprotkb:Q3U7R8|uniprotkb:Q8K2W4|uniprotkb:Q91YW1|uniprotkb:Q9JKQ3 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:ru2a_mouse(display_long)|uniprotkb:Snrpa1(gene name)|psi-mi:Snrpa1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) ensembl:ENSMUSG00000030512(gene)|ensembl:ENSMUST00000153609(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005686"(U2 snRNP)|go:"GO:0007283"(spermatogenesis)|go:"GO:0016604"(nuclear body)|go:"GO:0016607"(nuclear speck)|go:"GO:0030620"(U2 snRNA binding)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR003603(U2A'/phosphoprotein 32 family A, C-terminal)|interpro:IPR032675|interpro:IPR044640|mint:P57784|reactome:R-MMU-72163|refseq:NP_067311.4|entrezgene/locuslink:68981(identity) - - author-confidence:1.305917864 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:AMQnbw028+3/guP4MfrfDJCFu6s10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8R3P2 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11570399|uniprotkb:Q9ER08|uniprotkb:Q9ER07|uniprotkb:Q9CZV3|ensembl:ENSMUSP00000106772 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:dtx2_mouse(display_long)|uniprotkb:Protein deltex-2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase DTX2(gene name synonym)|uniprotkb:Dtx2(gene name)|psi-mi:Dtx2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570633|imex:IM-24977-47 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:XP_017176609.1|refseq:NP_001243025.1|refseq:NP_001243026.1|refseq:NP_001243027.1|refseq:NP_076231.1|refseq:XP_006504569.1|refseq:XP_006504570.1|refseq:XP_006504571.1|ensembl:ENSMUSG00000004947(gene)|ensembl:ENSMUST00000111142(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0007219"(Notch signaling pathway)|go:"GO:0008270"(zinc ion binding)|reactome:R-MMU-2122948|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031965"(nuclear membrane)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR004170(WWE)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR018123|interpro:IPR018957|interpro:IPR037197|interpro:IPR039396|interpro:IPR039398|interpro:IPR039399|rcsb pdb:1V87|entrezgene/locuslink:74198(identity) - - author-confidence:129.613419 figure legend:Table S3, S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:XPgb79Aw7JvuONrsmt/J+SHnnFU10090 intact-crc:0CEF0214F6E5A5E8|rigid:2R/qyhFmr3YjJOzA40x6yxmNMaY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZT8 uniprotkb:Q8QZV4 intact:EBI-911649|uniprotkb:Q80WV9|ensembl:ENSMUSP00000003502|ensembl:ENSMUSP00000102261|uniprotkb:Q920F1 intact:EBI-8321862|intact:MINT-4118093|uniprotkb:Q9JJG4|ensembl:ENSMUSP00000016125 psi-mi:rab3b_mouse(display_long)|uniprotkb:Rab3b(gene name)|psi-mi:Rab3b(display_short) psi-mi:st32c_mouse(display_long)|uniprotkb:Stk32c(gene name)|psi-mi:Stk32c(display_short)|uniprotkb:Pkek(gene name synonym)|uniprotkb:MNCb-1563(orf name) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571104|imex:IM-24977-49 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000003411(gene)|ensembl:ENSMUST00000003502(transcript)|ensembl:ENSMUST00000106650(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051586"(positive regulation of dopamine uptake involved in synaptic transmission)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097494"(regulation of vesicle size)|go:"GO:0098691"(dopaminergic synapse)|go:"GO:0098693"(regulation of synaptic vesicle cycle)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:Q9CZT8|reactome:R-MMU-8873719|refseq:NP_076026.1|entrezgene/locuslink:69908(identity) refseq:NP_001156012.1|refseq:NP_067277.2|ensembl:ENSMUSG00000015981(gene)|ensembl:ENSMUST00000016125(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0046872"(metal ion binding)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|mint:Q8QZV4|entrezgene/locuslink:57740(identity) - - comment:mint|author-confidence:2.635219440968621 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:4WkkwI5ty+Y60GheT3a0s2RVr2Q10090 rogid:l0YgQuYKu1amfT3hAzxej/TT9E410090 intact-crc:12FFA1B2092E1F0B|rigid:A6S7IYbajfAujSoYdAzL74zA4mQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZT8 uniprotkb:A2APF3 intact:EBI-911649|uniprotkb:Q80WV9|ensembl:ENSMUSP00000003502|ensembl:ENSMUSP00000102261|uniprotkb:Q920F1 intact:EBI-11566304|uniprotkb:Q3Y6S0|uniprotkb:B9EKP6|ensembl:ENSMUSP00000091845|ensembl:ENSMUSP00000135932 psi-mi:rab3b_mouse(display_long)|uniprotkb:Rab3b(gene name)|psi-mi:Rab3b(display_short) psi-mi:ctcfl_mouse(display_long)|uniprotkb:Boris(gene name synonym)|uniprotkb:Brother of the regulator of imprinted sites(gene name synonym)|uniprotkb:CCCTC-binding factor(gene name synonym)|uniprotkb:CTCF paralog(gene name synonym)|uniprotkb:CTCF-like protein(gene name synonym)|uniprotkb:Ctcfl(gene name)|psi-mi:Ctcfl(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571104|imex:IM-24977-49 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000003411(gene)|ensembl:ENSMUST00000003502(transcript)|ensembl:ENSMUST00000106650(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051586"(positive regulation of dopamine uptake involved in synaptic transmission)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097494"(regulation of vesicle size)|go:"GO:0098691"(dopaminergic synapse)|go:"GO:0098693"(regulation of synaptic vesicle cycle)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:Q9CZT8|reactome:R-MMU-8873719|refseq:NP_076026.1|entrezgene/locuslink:69908(identity) refseq:NP_001074856.1|ensembl:ENSMUSG00000070495(gene)|ensembl:ENSMUST00000094287(transcript)|ensembl:ENSMUST00000179693(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016571"(histone methylation)|go:"GO:0016604"(nuclear body)|go:"GO:0042393"(histone binding)|go:"GO:0043035"(chromatin insulator sequence binding)|go:"GO:0043046"(DNA methylation involved in gamete generation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|refseq:XP_017174657.1|dip:DIP-29209N|entrezgene/locuslink:664799(identity) - - caution:This sequence has been withdrawn from Uniprot.|crc64:BECF76F0C84FA7F0|author-confidence:13.551486115251356 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:4WkkwI5ty+Y60GheT3a0s2RVr2Q10090 rogid:Aimhm6eR/zsvBnioNpL8sTz0FcM10090 intact-crc:12FFA1B2092E1F0B|rigid:A6S7IYbajfAujSoYdAzL74zA4mQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZT8 uniprotkb:P62823 intact:EBI-911649|uniprotkb:Q80WV9|ensembl:ENSMUSP00000003502|ensembl:ENSMUSP00000102261|uniprotkb:Q920F1 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 psi-mi:rab3b_mouse(display_long)|uniprotkb:Rab3b(gene name)|psi-mi:Rab3b(display_short) psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571104|imex:IM-24977-49 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000003411(gene)|ensembl:ENSMUST00000003502(transcript)|ensembl:ENSMUST00000106650(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051586"(positive regulation of dopamine uptake involved in synaptic transmission)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097494"(regulation of vesicle size)|go:"GO:0098691"(dopaminergic synapse)|go:"GO:0098693"(regulation of synaptic vesicle cycle)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:Q9CZT8|reactome:R-MMU-8873719|refseq:NP_076026.1|entrezgene/locuslink:69908(identity) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) - - author-confidence:1.5313654124547722 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:4WkkwI5ty+Y60GheT3a0s2RVr2Q10090 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 intact-crc:12FFA1B2092E1F0B|rigid:A6S7IYbajfAujSoYdAzL74zA4mQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZT8 uniprotkb:P35276 intact:EBI-911649|uniprotkb:Q80WV9|ensembl:ENSMUSP00000003502|ensembl:ENSMUSP00000102261|uniprotkb:Q920F1 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 psi-mi:rab3b_mouse(display_long)|uniprotkb:Rab3b(gene name)|psi-mi:Rab3b(display_short) psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571104|imex:IM-24977-49 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000003411(gene)|ensembl:ENSMUST00000003502(transcript)|ensembl:ENSMUST00000106650(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051586"(positive regulation of dopamine uptake involved in synaptic transmission)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097494"(regulation of vesicle size)|go:"GO:0098691"(dopaminergic synapse)|go:"GO:0098693"(regulation of synaptic vesicle cycle)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:Q9CZT8|reactome:R-MMU-8873719|refseq:NP_076026.1|entrezgene/locuslink:69908(identity) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) - - author-confidence:14.087704986799805 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:4WkkwI5ty+Y60GheT3a0s2RVr2Q10090 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 intact-crc:12FFA1B2092E1F0B|rigid:A6S7IYbajfAujSoYdAzL74zA4mQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZT8 uniprotkb:Q8BHC1 intact:EBI-911649|uniprotkb:Q80WV9|ensembl:ENSMUSP00000003502|ensembl:ENSMUSP00000102261|uniprotkb:Q920F1 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab3b_mouse(display_long)|uniprotkb:Rab3b(gene name)|psi-mi:Rab3b(display_short) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571104|imex:IM-24977-49 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000003411(gene)|ensembl:ENSMUST00000003502(transcript)|ensembl:ENSMUST00000106650(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051586"(positive regulation of dopamine uptake involved in synaptic transmission)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097494"(regulation of vesicle size)|go:"GO:0098691"(dopaminergic synapse)|go:"GO:0098693"(regulation of synaptic vesicle cycle)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:Q9CZT8|reactome:R-MMU-8873719|refseq:NP_076026.1|entrezgene/locuslink:69908(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - - author-confidence:1.104568035000598 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:4WkkwI5ty+Y60GheT3a0s2RVr2Q10090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:12FFA1B2092E1F0B|rigid:A6S7IYbajfAujSoYdAzL74zA4mQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZT8 uniprotkb:Q8BRK8 intact:EBI-911649|uniprotkb:Q80WV9|ensembl:ENSMUSP00000003502|ensembl:ENSMUSP00000102261|uniprotkb:Q920F1 intact:EBI-11566288|uniprotkb:B1ASQ8|uniprotkb:Q3UYM4|ensembl:ENSMUSP00000030243 psi-mi:rab3b_mouse(display_long)|uniprotkb:Rab3b(gene name)|psi-mi:Rab3b(display_short) psi-mi:aapk2_mouse(display_long)|uniprotkb:Acetyl-CoA carboxylase kinase(gene name synonym)|uniprotkb:Hydroxymethylglutaryl-CoA reductase kinase(gene name synonym)|uniprotkb:Prkaa2(gene name)|psi-mi:Prkaa2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571104|imex:IM-24977-49 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000003411(gene)|ensembl:ENSMUST00000003502(transcript)|ensembl:ENSMUST00000106650(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051586"(positive regulation of dopamine uptake involved in synaptic transmission)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097494"(regulation of vesicle size)|go:"GO:0098691"(dopaminergic synapse)|go:"GO:0098693"(regulation of synaptic vesicle cycle)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:Q9CZT8|reactome:R-MMU-8873719|refseq:NP_076026.1|entrezgene/locuslink:69908(identity) refseq:NP_835279.2|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045821"(positive regulation of glycolytic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0047322"("[hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity")|go:"GO:0048511"(rhythmic process)|go:"GO:0050405"([acetyl-CoA carboxylase] kinase activity)|go:"GO:0055089"(fatty acid homeostasis)|go:"GO:0062028"(regulation of stress granule assembly)|go:"GO:0070507"(regulation of microtubule cytoskeleton organization)|go:"GO:0071277"(cellular response to calcium ion)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0071380"(cellular response to prostaglandin E stimulus)|go:"GO:0097009"(energy homeostasis)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1903829"(positive regulation of protein localization)|go:"GO:1904428"(negative regulation of tubulin deacetylation)|go:"GO:2000758"(positive regulation of peptidyl-lysine acetylation)|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR028375|interpro:IPR028783|interpro:IPR032270|reactome:R-MMU-1632852|reactome:R-MMU-163680|reactome:R-MMU-200425|reactome:R-MMU-380972|reactome:R-MMU-5628897|reactome:R-MMU-6804756|go:"GO:0043066"(negative regulation of apoptotic process)|ensembl:ENSMUSG00000028518(gene)|ensembl:ENSMUST00000030243(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004679"(AMP-activated protein kinase activity)|go:"GO:0004712"(protein serine/threonine/tyrosine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006633"(fatty acid biosynthetic process)|go:"GO:0006695"(cholesterol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0008610"(lipid biosynthetic process)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0014823"(response to activity)|go:"GO:0014850"(response to muscle activity)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0016241"(regulation of macroautophagy)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0016607"(nuclear speck)|go:"GO:0019216"(regulation of lipid metabolic process)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031000"(response to caffeine)|go:"GO:0031588"(nucleotide-activated protein kinase complex)|go:"GO:0031669"(cellular response to nutrient levels)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0035174"(histone serine kinase activity)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035690"|go:"GO:0042149"(cellular response to glucose starvation)|go:"GO:0042593"(glucose homeostasis)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0043025"(neuronal cell body)|go:"GO:0004672"(protein kinase activity)|entrezgene/locuslink:108079(identity) - - author-confidence:1.062441652282411 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:4WkkwI5ty+Y60GheT3a0s2RVr2Q10090 rogid:WgZjtam/1W1ciarjWKQHKZmSU/s10090 intact-crc:12FFA1B2092E1F0B|rigid:A6S7IYbajfAujSoYdAzL74zA4mQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZT8 uniprotkb:P63011 intact:EBI-911649|uniprotkb:Q80WV9|ensembl:ENSMUSP00000003502|ensembl:ENSMUSP00000102261|uniprotkb:Q920F1 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 psi-mi:rab3b_mouse(display_long)|uniprotkb:Rab3b(gene name)|psi-mi:Rab3b(display_short) psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571104|imex:IM-24977-49 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000003411(gene)|ensembl:ENSMUST00000003502(transcript)|ensembl:ENSMUST00000106650(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051586"(positive regulation of dopamine uptake involved in synaptic transmission)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097494"(regulation of vesicle size)|go:"GO:0098691"(dopaminergic synapse)|go:"GO:0098693"(regulation of synaptic vesicle cycle)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:Q9CZT8|reactome:R-MMU-8873719|refseq:NP_076026.1|entrezgene/locuslink:69908(identity) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) - - author-confidence:11.330033433353742 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:4WkkwI5ty+Y60GheT3a0s2RVr2Q10090 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 intact-crc:12FFA1B2092E1F0B|rigid:A6S7IYbajfAujSoYdAzL74zA4mQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8QZZ8 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) - - author-confidence:18.88368656 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8BFY9 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-3870049|uniprotkb:Q8C0S3|uniprotkb:Q8K2E7|ensembl:ENSMUSP00000105028 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:tnpo1_mouse(display_long)|uniprotkb:Tnpo1(gene name)|psi-mi:Tnpo1(display_short)|uniprotkb:Kpnb2(gene name synonym)|uniprotkb:Importin beta-2(gene name synonym)|uniprotkb:Karyopherin beta-2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001041732.1|refseq:NP_848831.2|refseq:XP_006517699.1|refseq:XP_006517700.1|ensembl:ENSMUSG00000009470(gene)|ensembl:ENSMUST00000109401(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0061608"(nuclear import signal receptor activity)|interpro:IPR001494(Importin-beta, N-terminal)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040122|mint:Q8BFY9|reactome:R-MMU-450513|reactome:R-MMU-5620924|entrezgene/locuslink:238799(identity) - - author-confidence:4.748143137 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:khDQjW/eY+ga9LRUpgOrxbKi6lg10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q9DC16 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8338430|intact:MINT-4094160|ensembl:ENSMUSP00000132922 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:ergi1_mouse(display_long)|uniprotkb:Ergic1(gene name)|psi-mi:Ergic1(display_short)|uniprotkb:Ergic32(gene name synonym)|uniprotkb:ER-Golgi intermediate compartment 32 kDa protein(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_080446.1|ensembl:ENSMUSG00000001576(gene)|ensembl:ENSMUST00000167662(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0016020"(membrane)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0030173"(integral component of Golgi membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|interpro:IPR012936(Protein of unknown function DUF1692)|interpro:IPR039542|mint:Q9DC16|entrezgene/locuslink:67458(identity) - - comment:mint|function:Possible role in transport between endoplasmic reticulum and Golgi|author-confidence:9.815804177 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:1sYA2jvGx2+olqrfBQmi5qUjNGg10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q6A0A9 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8327719|intact:MINT-1858841|uniprotkb:Q91Z16|uniprotkb:B3DFJ0|uniprotkb:A0PJK6|ensembl:ENSMUSP00000053877 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:f120a_mouse(display_long)|uniprotkb:Kiaa0183(gene name synonym)|uniprotkb:Ossa(gene name synonym)|uniprotkb:Oxidative stress-associated Src activator(gene name synonym)|uniprotkb:Protein FAM120A(gene name synonym)|uniprotkb:FAM120A(gene name)|psi-mi:FAM120A(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001028440.2|ensembl:ENSMUSG00000038014(gene)|ensembl:ENSMUST00000060805(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|interpro:IPR026784|interpro:IPR029060|mint:Q6A0A9|entrezgene/locuslink:218236(identity) - - comment:"fragmentation type: fragment"|comment:mint|author-confidence:8.239634857 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:tZj0TOhfuvvF4GaEPHI7jWpKyl810090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P27612 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8028777|intact:MINT-220705|uniprotkb:A4QPD6|uniprotkb:Q8C6C4|ensembl:ENSMUSP00000102724 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:plap_mouse(display_long)|uniprotkb:Plaa(gene name)|psi-mi:Plaa(display_short)|uniprotkb:Plap(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_766283.2|go:"GO:0032430"(positive regulation of phospholipase A2 activity)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0043162"(ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway)|go:"GO:0045202"(synapse)|go:"GO:0070062"(extracellular exosome)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:1900045"(negative regulation of protein K63-linked ubiquitination)|go:"GO:1903423"(positive regulation of synaptic vesicle recycling)|go:"GO:1903861"(positive regulation of dendrite extension)|go:"GO:2001224"(positive regulation of neuron migration)|interpro:IPR001680(WD40 repeat)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR013535(PUL)|interpro:IPR015155("PFU (PLAA family ubiquitin binding)")|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR038122|ensembl:ENSMUSG00000028577(gene)|ensembl:ENSMUST00000107107(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006693"(prostaglandin metabolic process)|go:"GO:0006954"(inflammatory response)|go:"GO:0007399"(nervous system development)|go:"GO:0010992"(ubiquitin recycling)|go:"GO:0016005"(phospholipase A2 activator activity)|go:"GO:0016236"(macroautophagy)|entrezgene/locuslink:18786(identity) - - comment:mint|function:Plays an important role in the regulation of specific inflammatory disease processes|author-confidence:4.476820672 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:p/qawqczDvDTmx2zMYx5dk6Zdwg10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8BSY0 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8366490|uniprotkb:Q9EQ64|intact:MINT-4112262|uniprotkb:Q9EPA6|uniprotkb:Q6P8S1|ensembl:ENSMUSP00000077273 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:asph_mouse(display_long)|uniprotkb:Asph(gene name)|psi-mi:Asph(display_short)|uniprotkb:Aspartate beta-hydroxylase(gene name synonym)|uniprotkb:Peptide-aspartate beta-dioxygenase(gene name synonym)|uniprotkb:Bah(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001171327.1|refseq:NP_001171323.1|refseq:NP_001171326.1|refseq:NP_001171325.1|refseq:NP_001171321.1|refseq:NP_075553.2|refseq:NP_001171324.1|refseq:NP_001277296.1|ensembl:ENSMUSG00000028207(gene)|ensembl:ENSMUST00000078139(transcript)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005886"(plasma membrane)|go:"GO:0007389"(pattern specification process)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010524"(positive regulation of calcium ion transport into cytosol)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0031585"(regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0032237"(activation of store-operated calcium channel activity)|go:"GO:0032541"(cortical endoplasmic reticulum)|go:"GO:0033017"(sarcoplasmic reticulum membrane)|go:"GO:0033198"(response to ATP)|go:"GO:0035108"(limb morphogenesis)|go:"GO:0042264"(peptidyl-aspartic acid hydroxylation)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051480"(regulation of cytosolic calcium ion concentration)|go:"GO:0055074"(calcium ion homeostasis)|go:"GO:0060021"(roof of mouth development)|go:"GO:0060325"(face morphogenesis)|go:"GO:0062101"(peptidyl-aspartic acid 3-dioxygenase activity)|go:"GO:0070588"(calcium ion transmembrane transport)|go:"GO:0071277"(cellular response to calcium ion)|go:"GO:0090316"(positive regulation of intracellular protein transport)|go:"GO:0097202"(activation of cysteine-type endopeptidase activity)|go:"GO:1901879"(regulation of protein depolymerization)|interpro:IPR007803(Aspartyl/Asparaginyl beta-hydroxylase)|interpro:IPR007943(Aspartyl beta-hydroxylase, N-terminal)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR027443|interpro:IPR039038|mint:Q8BSY0|reactome:R-MMU-2672351|reactome:R-MMU-5578775|go:"GO:0045862"(positive regulation of proteolysis)|entrezgene/locuslink:65973(identity) - - comment:mint|function:"Specifically hydroxylates an Asp or Asn residue in certain epidermal growth factor-like (EGF) domains of a number of proteins"|author-confidence:1.575812316 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:x06lMmMmxgaETSn5iGJ/1hScfSI10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P14576 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8428927|intact:MINT-247596|uniprotkb:Q9D008|uniprotkb:Q9CWH7|uniprotkb:Q3UWX8|ensembl:ENSMUSP00000021407|ensembl:ENSMUSP00000106336|ensembl:ENSMUSP00000152764 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:srp54_mouse(display_long)|uniprotkb:Srp54(gene name)|psi-mi:Srp54(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001093579.1|refseq:NP_036029.2|ensembl:ENSMUSG00000073079(gene)|ensembl:ENSMUSG00000112449(gene)|ensembl:ENSMUST00000021407(transcript)|ensembl:ENSMUST00000110708(transcript)|ensembl:ENSMUST00000220578(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005786"(signal recognition particle, endoplasmic reticulum targeting)|go:"GO:0005829"(cytosol)|go:"GO:0006614"(SRP-dependent cotranslational protein targeting to membrane)|go:"GO:0006616"(SRP-dependent cotranslational protein targeting to membrane, translocation)|go:"GO:0008312"(7S RNA binding)|go:"GO:0016607"(nuclear speck)|go:"GO:0019003"(GDP binding)|go:"GO:0030593"(neutrophil chemotaxis)|go:"GO:0030851"(granulocyte differentiation)|go:"GO:0030942"(endoplasmic reticulum signal peptide binding)|go:"GO:0031017"(exocrine pancreas development)|go:"GO:0043021"(ribonucleoprotein complex binding)|interpro:IPR000897(Signal recognition particle, SRP54 subunit, GTPase)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004125(Signal recognition particle, SRP54 subunit, M-domain)|interpro:IPR006325(Signal recognition particle, SRP54 subunit)|interpro:IPR013822(Signal recognition particle, SRP54 subunit, helical bundle)|interpro:IPR022941|interpro:IPR027417|interpro:IPR036891|interpro:IPR042101|mint:P14576|rcsb pdb:1RY1|rcsb pdb:1WGW|reactome:R-MMU-1799339|entrezgene/locuslink:24067(identity) - - comment:mint|function:"Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein)"|author-confidence:32.360559 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:izjPSrxa4r6+T8pmv0YJx98fdbw10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8C9B9 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8340028|uniprotkb:A2AJ47|uniprotkb:Q3ZTP5|uniprotkb:A2AJ48|uniprotkb:Q4V9W1|uniprotkb:Q8BMD0|uniprotkb:Q8BRG2|uniprotkb:Q8CHR5|uniprotkb:B2RS46|uniprotkb:Q6ZQD7|uniprotkb:Q3ZTP6|uniprotkb:Q05C59|uniprotkb:Q80V34|uniprotkb:Q9WV00|intact:MINT-4111472|ensembl:ENSMUSP00000084794 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:dido1_mouse(display_long)|uniprotkb:Dido1(gene name)|psi-mi:Dido1(display_short)|uniprotkb:Datf1(gene name synonym)|uniprotkb:Dio1(gene name synonym)|uniprotkb:Death-associated transcription factor 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_808520.2|refseq:NP_780760.2|refseq:NP_035935.2|refseq:XP_006500671.1|refseq:XP_006500672.1|refseq:XP_006500673.1|refseq:XP_006500674.1|refseq:XP_006500675.1|refseq:XP_006500678.1|refseq:XP_006500679.1|refseq:NP_001278361.1|refseq:NP_001278362.1|ensembl:ENSMUSG00000038914(gene)|ensembl:ENSMUST00000087517(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005819"(spindle)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0097190"(apoptotic signaling pathway)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR003618(Transcription elongation factor S-II, central region)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR012921(Spen paralogue and orthologue C-terminal)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019786|interpro:IPR019787|interpro:IPR033082|interpro:IPR036575|mint:Q8C9B9|rcsb pdb:1WEM|entrezgene/locuslink:23856(identity) - - comment:mint|function:Putative transcription factor, weakly pro-apoptotic when overexpressed|author-confidence:2.125954314 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:dMthBBfD+e96GyEkwCBsH7lsJ/810090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q99LH1 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-8458780|uniprotkb:B1ASC3|intact:MINT-4103943|uniprotkb:Q8BIF8|ensembl:ENSMUSP00000030684 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:nog2_mouse(display_long)|uniprotkb:Gnl2(gene name)|psi-mi:Gnl2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_663527.2|ensembl:ENSMUSG00000028869(gene)|ensembl:ENSMUST00000030684(transcript)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR006073(GTP1/OBG)|interpro:IPR012971(NGP1, N-terminal)|interpro:IPR023179|interpro:IPR024929|interpro:IPR027417|interpro:IPR030378|mint:Q99LH1|entrezgene/locuslink:230737(identity) - - function:GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation|comment:mint|author-confidence:75.81320876 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:FFvgh3mmfxqi/0sV4eNXMbU+GdU10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P15379 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-7565891|intact:EBI-15579519|uniprotkb:Q62063|uniprotkb:Q62061|uniprotkb:Q05732|intact:UNK-5943644|uniprotkb:Q9QYX8|uniprotkb:Q62408|uniprotkb:Q99J14|uniprotkb:Q64296|uniprotkb:Q61395|uniprotkb:Q62060|uniprotkb:Q62062|uniprotkb:Q62409 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:cd44_mouse(display_long)|uniprotkb:Phagocytic glycoprotein I(gene name synonym)|uniprotkb:Cd44(gene name)|psi-mi:Cd44(display_short)|uniprotkb:Ly-24(gene name synonym)|uniprotkb:Phagocytic glycoprotein 1(gene name synonym)|uniprotkb:HUTCH-I(gene name synonym)|uniprotkb:Extracellular matrix receptor III(gene name synonym)|uniprotkb:GP90 lymphocyte homing/adhesion receptor(gene name synonym)|uniprotkb:Hermes antigen(gene name synonym)|uniprotkb:Hyaluronate receptor(gene name synonym)|uniprotkb:Lymphocyte antigen 24(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001171257.1|refseq:NP_001034240.1|refseq:NP_001171258.1|refseq:NP_033981.2|refseq:NP_001171256.1|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001658"(branching involved in ureteric bud morphogenesis)|go:"GO:0002246"(wound healing involved in inflammatory response)|go:"GO:0002821"(positive regulation of adaptive immune response)|go:"GO:0002906"(negative regulation of mature B cell apoptotic process)|go:"GO:0004888"(transmembrane signaling receptor activity)|go:"GO:0005114"(type II transforming growth factor beta receptor binding)|go:"GO:0005154"(epidermal growth factor receptor binding)|go:"GO:0005540"(hyaluronic acid binding)|go:"GO:0005634"(nucleus)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005902"(microvillus)|go:"GO:0006954"(inflammatory response)|go:"GO:0007155"(cell adhesion)|go:"GO:0009897"(external side of plasma membrane)|go:"GO:0009986"(cell surface)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0016477"(cell migration)|go:"GO:0019221"(cytokine-mediated signaling pathway)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030214"(hyaluronan catabolic process)|go:"GO:0031175"(neuron projection development)|go:"GO:0031258"(lamellipodium membrane)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033031"(positive regulation of neutrophil apoptotic process)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034116"(positive regulation of heterotypic cell-cell adhesion)|go:"GO:0034238"(macrophage fusion)|go:"GO:0035692"(macrophage migration inhibitory factor receptor complex)|go:"GO:0042110"(T cell activation)|go:"GO:0042995"(cell projection)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043154"(negative regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0043518"(negative regulation of DNA damage response, signal transduction by p53 class mediator)|go:"GO:0044319"(wound healing, spreading of cells)|go:"GO:0044344"(cellular response to fibroblast growth factor stimulus)|go:"GO:0045590"(negative regulation of regulatory T cell differentiation)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050731"(positive regulation of peptidyl-tyrosine phosphorylation)|go:"GO:0051219"(phosphoprotein binding)|go:"GO:0060442"(branching involved in prostate gland morphogenesis)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0070487"(monocyte aggregation)|go:"GO:1900625"(positive regulation of monocyte aggregation)|go:"GO:1902166"(negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator)|go:"GO:2000392"(regulation of lamellipodium morphogenesis)|go:"GO:2000562"(negative regulation of CD4-positive, alpha-beta T cell proliferation)|interpro:IPR000538(Link)|interpro:IPR001231(CD44 antigen)|interpro:IPR016186(C-type lectin-like)|interpro:IPR016187(C-type lectin fold)|interpro:IPR043210|rcsb pdb:2JCP|rcsb pdb:2JCQ|rcsb pdb:5BZJ|rcsb pdb:2JCR|rcsb pdb:5BZK|rcsb pdb:5BZL|rcsb pdb:5BZM|rcsb pdb:5BZN|rcsb pdb:5BZO|rcsb pdb:2ZPY|rcsb pdb:5BZP|rcsb pdb:5BZQ|rcsb pdb:5BZR|rcsb pdb:5BZS|rcsb pdb:5BZT|rcsb pdb:4MRD|rcsb pdb:4MRE|rcsb pdb:4MRF|rcsb pdb:4MRG|rcsb pdb:4MRH|rcsb pdb:4NP2|rcsb pdb:4NP3|rcsb pdb:5BZC|rcsb pdb:5BZE|rcsb pdb:5BZF|rcsb pdb:5BZG|rcsb pdb:5BZH|rcsb pdb:5BZI|dip:DIP-29095N|reactome:R-MMU-1474228|reactome:R-MMU-202733|reactome:R-MMU-216083|reactome:R-MMU-2160916|reactome:R-MMU-6798695|entrezgene/locuslink:12505(identity) - - function:Main cell surface receptor for hyaluronate. Adhesion to mucosal high endothelial venule and to types I and VI collagen. Probably involved in matrix adhesion, lymphocyte activation and lymph node homing|comment:mint|author-confidence:1.91853543 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:1Rlb+aBsm9z0HJuB6Oz4Oilui1o10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q3UNW5 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-5691372|uniprotkb:Q99PF2|uniprotkb:Q14AW3|ensembl:ENSMUSP00000027629 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:tf2l1_mouse(display_long)|uniprotkb:Tfcp2l1(gene name)|psi-mi:Tfcp2l1(display_short)|uniprotkb:CP2-related transcriptional repressor 1(gene name synonym)|uniprotkb:Crtr1(gene name synonym)|uniprotkb:Tcfcp2l1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_076244.2|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0002070"(epithelial cell maturation)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007028"(cytoplasm organization)|go:"GO:0007431"(salivary gland development)|go:"GO:0008340"(determination of adult lifespan)|go:"GO:0016020"(membrane)|go:"GO:0045927"(positive regulation of growth)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR007604(CP2 transcription factor)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR037598|interpro:IPR041418|mint:Q3UNW5|ensembl:ENSMUSG00000026380(gene)|ensembl:ENSMUST00000027629(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000902"(cell morphogenesis)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|entrezgene/locuslink:81879(identity) - - author-confidence:9.480935134 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:QtzNiWQU27XK2s0idF91/IAVi0E10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q80XK6 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11566520|uniprotkb:Q9CWK6|uniprotkb:Q8BIV0|uniprotkb:Q8BIQ4|uniprotkb:A0PJL7|uniprotkb:Q8R1H5|ensembl:ENSMUSP00000037441 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:atg2b_mouse(display_long)|uniprotkb:Atg2b(gene name)|psi-mi:Atg2b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_083930.5|ensembl:ENSMUSG00000041341(gene)|ensembl:ENSMUST00000041055(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005811"(lipid droplet)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0044805"(late nucleophagy)|go:"GO:0061709"(reticulophagy)|go:"GO:0120013"(lipid transfer activity)|interpro:IPR015412(ATG2, C-terminal)|interpro:IPR026849|interpro:IPR026854|mint:Q80XK6|entrezgene/locuslink:76559(identity) - - author-confidence:1.010854684 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:jnUVUCip0mX6qajisFBvpNEqixE10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8BHD8 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-4284107|intact:EBI-4286238|uniprotkb:Q3UKB7|uniprotkb:Q8BJT6|uniprotkb:Q8BK38|uniprotkb:Q8C0H6|uniprotkb:Q8R1D5|ensembl:ENSMUSP00000029116 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:pcmd2_mouse(display_long)|uniprotkb:Pcmtd2(gene name)|psi-mi:Pcmtd2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_705822.1|uniprotkb:B0R0C8(uniprot-removed-ac)|refseq:NP_001278140.1|ensembl:ENSMUST00000029116(transcript)|go:"GO:0004719"("protein-L-isoaspartate (D-aspartate) O-methyltransferase activity")|go:"GO:0005737"(cytoplasm)|interpro:IPR000682("Protein-L-isoaspartate(D-aspartate) O-methyltransferase")|interpro:IPR029063|ensembl:ENSMUSG00000027589(gene)|entrezgene/locuslink:245867(identity) - - author-confidence:1.265576498 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:cxvzknx+QmPo2pIM/ZPuYK+uOaE10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:B2RXR6 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11566298|uniprotkb:B2RXN6|uniprotkb:B7ZWK8|ensembl:ENSMUSP00000137616 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:anr44_mouse(display_long)|uniprotkb:Ankyrin repeat domain-containing protein 44(gene name synonym)|uniprotkb:Ankrd44(gene name)|psi-mi:Ankrd44(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001074902.2|ensembl:ENSMUSG00000052331(gene)|ensembl:ENSMUST00000179030(transcript)|interpro:IPR002110(Ankyrin)|interpro:IPR020683|interpro:IPR036770|entrezgene/locuslink:329154(identity) - - author-confidence:2.962412914 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:u2gh8Mr3OLcC72DfwHC0bMCFj3c10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q9WV55 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-645974|uniprotkb:Q9QY77|uniprotkb:Q3TJM1|ensembl:ENSMUSP00000024897 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:vapa_mouse(display_long)|uniprotkb:33 kDa VAMP-associated protein(gene name synonym)|uniprotkb:Vapa(gene name)|psi-mi:Vapa(display_short)|uniprotkb:Vap33(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_038961.2|ensembl:ENSMUSG00000024091(gene)|ensembl:ENSMUST00000024897(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0008017"(microtubule binding)|go:"GO:0008219"(cell death)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031175"(neuron projection development)|go:"GO:0031965"(nuclear membrane)|go:"GO:0031982"(vesicle)|go:"GO:0033149"(FFAT motif binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0044791"(obsolete positive regulation by host of viral release from host cell)|go:"GO:0044828"(negative regulation by host of viral genome replication)|go:"GO:0044829"(positive regulation by host of viral genome replication)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0070972"(protein localization to endoplasmic reticulum)|go:"GO:0090114"(COPII-coated vesicle budding)|interpro:IPR000535(Major sperm protein)|interpro:IPR008962(PapD-like)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR016763(Vesicle-associated membrane protein)|mint:Q9WV55|rcsb pdb:2CRI|reactome:R-MMU-1660661|reactome:R-MMU-6798695|reactome:R-MMU-9609523|entrezgene/locuslink:30960(identity) - - author-confidence:2.048841614 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:LQV6uN7oD/EpHQvexl/pGkG6bmE10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P62196 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-357713|uniprotkb:O35051|uniprotkb:P47210|uniprotkb:Q3UL51|uniprotkb:P52915|uniprotkb:P52916|uniprotkb:Q9CWN5|ensembl:ENSMUSP00000021049 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:prs8_mouse(display_long)|uniprotkb:Psmc5(gene name)|psi-mi:Psmc5(display_short)|uniprotkb:Sug1(gene name synonym)|uniprotkb:Proteasome 26S subunit ATPase 5(gene name synonym)|uniprotkb:Proteasome subunit p45(gene name synonym)|uniprotkb:p45/SUG(gene name synonym)|uniprotkb:26S proteasome AAA-ATPase subunit RPT6(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_032976.1|ensembl:ENSMUSG00000020708(gene)|ensembl:ENSMUST00000021049(transcript)|go:"GO:0000502"(proteasome complex)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005675"(transcription factor TFIIH holo complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0005838"(proteasome regulatory particle)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008540"(proteasome regulatory particle, base subcomplex)|go:"GO:0016234"(inclusion body)|go:"GO:0017025"(TBP-class protein binding)|go:"GO:0022624"(proteasome accessory complex)|reactome:R-MMU-4641257|reactome:R-MMU-4641258|reactome:R-MMU-5358346|reactome:R-MMU-5607761|reactome:R-MMU-5607764|reactome:R-MMU-5610780|reactome:R-MMU-5610785|reactome:R-MMU-5632684|reactome:R-MMU-5658442|reactome:R-MMU-5668541|reactome:R-MMU-5676590|reactome:R-MMU-5687128|reactome:R-MMU-5689603|reactome:R-MMU-5689880|reactome:R-MMU-68827|reactome:R-MMU-68949|reactome:R-MMU-69017|reactome:R-MMU-69481|reactome:R-MMU-69601|reactome:R-MMU-75815|reactome:R-MMU-8852276|reactome:R-MMU-8854050|reactome:R-MMU-8932339|reactome:R-MMU-8939236|reactome:R-MMU-8939902|reactome:R-MMU-8941858|reactome:R-MMU-8948751|reactome:R-MMU-8951664|reactome:R-MMU-9020702|reactome:R-MMU-983168|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031531"(thyrotropin-releasing hormone receptor binding)|go:"GO:0031595"(nuclear proteasome complex)|go:"GO:0031597"(cytosolic proteasome complex)|go:"GO:0036402"(proteasome-activating activity)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)|go:"GO:0050804"(modulation of chemical synaptic transmission)|go:"GO:0090261"(positive regulation of inclusion body assembly)|go:"GO:0098794"(postsynapse)|go:"GO:0140296"(general transcription initiation factor binding)|go:"GO:0140297"(DNA-binding transcription factor binding)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR005937(26S proteasome subunit P45)|interpro:IPR027417|interpro:IPR032501|interpro:IPR041569|mint:P62196|reactome:R-MMU-1169091|reactome:R-MMU-1234176|reactome:R-MMU-1236978|reactome:R-MMU-174084|reactome:R-MMU-174154|reactome:R-MMU-174178|reactome:R-MMU-174184|reactome:R-MMU-187577|reactome:R-MMU-195253|reactome:R-MMU-202424|reactome:R-MMU-2467813|reactome:R-MMU-2871837|reactome:R-MMU-349425|reactome:R-MMU-350562|reactome:R-MMU-382556|reactome:R-MMU-450408|reactome:R-MMU-4608870|dip:DIP-35174N|entrezgene/locuslink:19184(identity) - - author-confidence:11.26880738 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:zgUTOX/O4m86U/Nf+pnT7u0m0gY10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q9CZE3 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) - - author-confidence:86.27054777 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P54987 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11569530|uniprotkb:Q3U8E8|uniprotkb:Q8CBA6|uniprotkb:Q3TAA1 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:irg1_mouse(display_long)|uniprotkb:Acod1(gene name)|psi-mi:Acod1(display_short)|uniprotkb:Aconitate decarboxylase(gene name synonym)|uniprotkb:Aconitate decarboxylase 1(gene name synonym)|uniprotkb:Cis-aconitic acid decarboxylase(gene name synonym)|uniprotkb:Immune-responsive gene 1 protein(gene name synonym)|uniprotkb:Irg1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) interpro:IPR005656(MmgE/PrpD)|refseq:NP_032418.1|interpro:IPR042188|interpro:IPR042183|go:"GO:0002760"(positive regulation of antimicrobial humoral response)|go:"GO:0005739"(mitochondrion)|go:"GO:0006952"(defense response)|go:"GO:0006954"(inflammatory response)|go:"GO:0007566"(embryo implantation)|go:"GO:0009617"(response to bacterium)|go:"GO:0032088"(negative regulation of NF-kappaB transcription factor activity)|go:"GO:0032480"(negative regulation of type I interferon production)|go:"GO:0032496"(response to lipopolysaccharide)|go:"GO:0034136"(negative regulation of toll-like receptor 2 signaling pathway)|go:"GO:0034144"(negative regulation of toll-like receptor 4 signaling pathway)|go:"GO:0035458"(cellular response to interferon-beta)|go:"GO:0045824"(negative regulation of innate immune response)|go:"GO:0047613"(aconitate decarboxylase activity)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0051607"(defense response to virus)|go:"GO:0071219"(cellular response to molecule of bacterial origin)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071346"(cellular response to interferon-gamma)|go:"GO:0071347"(cellular response to interleukin-1)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071393"(cellular response to progesterone stimulus)|go:"GO:0072573"(tolerance induction to lipopolysaccharide)|go:"GO:2000379"(positive regulation of reactive oxygen species metabolic process)|interpro:IPR036148|rcsb pdb:6R6T|entrezgene/locuslink:16365(identity) - - author-confidence:136.3930891 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:SunD3XRzws6x5pF1/npfHeH4knE10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q6ZPR5 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11568983|uniprotkb:Q8R0J3|uniprotkb:Q3TPP1|uniprotkb:Q8CD83|uniprotkb:Q9CX74|uniprotkb:Q3TPE0|uniprotkb:Q8CD12|uniprotkb:Q8CBJ5|ensembl:ENSMUSP00000006053 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:nsma3_mouse(display_long)|uniprotkb:Kiaa1418(gene name synonym)|uniprotkb:Neutral sphingomyelinase 3(gene name synonym)|uniprotkb:Neutral sphingomyelinase III(gene name synonym)|uniprotkb:Smpd4(gene name)|psi-mi:Smpd4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001158081.1|refseq:NP_001158082.1|refseq:NP_001158083.1|refseq:NP_084221.2|refseq:XP_006522785.1|ensembl:ENSMUSG00000005899(gene)|ensembl:ENSMUST00000006053(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0004767"(sphingomyelin phosphodiesterase activity)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005640"(nuclear outer membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006685"(sphingomyelin catabolic process)|go:"GO:0007029"(endoplasmic reticulum organization)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042383"(sarcolemma)|go:"GO:0046475"(glycerophospholipid catabolic process)|go:"GO:0046513"(ceramide biosynthetic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0050290"(sphingomyelin phosphodiesterase D activity)|interpro:IPR024129|go:"GO:0071356"(cellular response to tumor necrosis factor)|reactome:R-MMU-1660662|entrezgene/locuslink:77626(identity) - - author-confidence:14.5958991 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:Ar6EgV2x1pyN/3pkiUiOEUZhUjQ10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P17426 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-775189|ensembl:ENSMUSP00000082519|ensembl:ENSMUSP00000127842 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:ap2a1_mouse(display_long)|uniprotkb:Adaptor protein complex AP-2 subunit alpha-1(gene name synonym)|uniprotkb:Alpha1-adaptin(gene name synonym)|uniprotkb:Plasma membrane adaptor HA2/AP2 adaptin alpha A subunit(gene name synonym)|uniprotkb:Alpha-adaptin A(gene name synonym)|uniprotkb:Clathrin assembly protein complex 2 alpha-A large chain(gene name synonym)|uniprotkb:100 kDa coated vesicle protein A(gene name synonym)|uniprotkb:Ap2a1(gene name)|psi-mi:Ap2a1(display_short)|uniprotkb:Adtaa(gene name synonym)|uniprotkb:Clapa1(gene name synonym)|uniprotkb:Adaptor-related protein complex 2 subunit alpha-1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001070732.1|refseq:NP_031484.1|ensembl:ENSMUSG00000060279(gene)|ensembl:ENSMUST00000085399(transcript)|ensembl:ENSMUST00000166972(transcript)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006898"(receptor-mediated endocytosis)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030117"(membrane coat)|go:"GO:0030122"(AP-2 adaptor complex)|go:"GO:0030136"(clathrin-coated vesicle)|go:"GO:0030141"(secretory granule)|go:"GO:0032433"(filopodium tip)|go:"GO:0032991"(protein-containing complex)|go:"GO:0035615"(clathrin adaptor activity)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050750"(low-density lipoprotein particle receptor binding)|go:"GO:0072583"(clathrin-dependent endocytosis)|go:"GO:0140312"(cargo adaptor activity)|go:"GO:1900126"(negative regulation of hyaluronan biosynthetic process)|interpro:IPR002553(Clathrin/coatomer adaptor, adaptin-like, N-terminal)|interpro:IPR003164(Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain)|interpro:IPR008152(Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain)|interpro:IPR009028(Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012295(Beta2-adaptin/TATA-box binding, C-terminal)|interpro:IPR013041(Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR017104(Adaptor protein complex AP-2, alpha subunit)|mint:P17426|reactome:R-MMU-177504|reactome:R-MMU-2132295|reactome:R-MMU-416993|reactome:R-MMU-437239|reactome:R-MMU-5099900|reactome:R-MMU-5140745|reactome:R-MMU-8856825|reactome:R-MMU-8856828|reactome:R-MMU-8866427|reactome:R-MMU-8964038|entrezgene/locuslink:11771(identity) - - author-confidence:1.006749146 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:Dd6Q+Et/LTlmo5qpro2Zaeq0dMc10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q91WD5 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-772751|uniprotkb:Q3U5Y9|uniprotkb:Q3UJX7|uniprotkb:Q99L23|uniprotkb:Q3TNA8|ensembl:ENSMUSP00000013737 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:ndus2_mouse(display_long)|uniprotkb:NADH-ubiquinone oxidoreductase 49 kDa subunit(gene name synonym)|uniprotkb:Complex I-49kD(gene name synonym)|uniprotkb:Ndufs2(gene name)|psi-mi:Ndufs2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_694704.1|ensembl:ENSMUSG00000013593(gene)|ensembl:ENSMUST00000013737(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005747"(mitochondrial respiratory chain complex I)|go:"GO:0006120"(mitochondrial electron transport, NADH to ubiquinone)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0019826"(oxygen sensor activity)|go:"GO:0022008"(neurogenesis)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032981"(mitochondrial respiratory chain complex I assembly)|go:"GO:0042063"(gliogenesis)|go:"GO:0042775"(mitochondrial ATP synthesis coupled electron transport)|go:"GO:0046872"(metal ion binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051287"(NAD binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|go:"GO:0061351"(neural precursor cell proliferation)|go:"GO:0071453"(cellular response to oxygen levels)|interpro:IPR001135(NADH-ubiquinone oxidoreductase, chain 49kDa)|interpro:IPR014029(NADH-ubiquinone oxidoreductase, chain 49kDa, conserved site)|interpro:IPR022885|interpro:IPR029014|mint:Q91WD5|rcsb pdb:6G2J|rcsb pdb:6G72|rcsb pdb:6ZR2|rcsb pdb:6ZTQ|rcsb pdb:7AK5|rcsb pdb:7AK6|rcsb pdb:7B93|reactome:R-MMU-611105|reactome:R-MMU-6799198|entrezgene/locuslink:226646(identity) - - author-confidence:4.644255193 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:dk8e26C1hIdTZvDnX5nE1n+juwk10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q924N4 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-620972|uniprotkb:A2AGK1|ensembl:ENSMUSP00000028549|uniprotkb:Q924N3 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:s12a6_mouse(display_long)|uniprotkb:Electroneutral potassium-chloride cotransporter 3(gene name synonym)|uniprotkb:K-Cl cotransporter 3(gene name synonym)|uniprotkb:Slc12a6(gene name)|psi-mi:Slc12a6(display_short)|uniprotkb:Kcc3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) ensembl:ENSMUSG00000027130(gene)|ensembl:ENSMUST00000028549(transcript)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006811"(ion transport)|go:"GO:0006884"(cell volume homeostasis)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0008519"(ammonium transmembrane transporter activity)|go:"GO:0015079"(potassium ion transmembrane transporter activity)|go:"GO:0015379"("potassium:chloride symporter activity")|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030424"(axon)|go:"GO:0045202"(synapse)|go:"GO:0055064"(chloride ion homeostasis)|go:"GO:0055075"(potassium ion homeostasis)|go:"GO:0071476"(cellular hypotonic response)|go:"GO:0071477"(cellular hypotonic salinity response)|go:"GO:0140157"(ammonium import across plasma membrane)|go:"GO:1902476"(chloride transmembrane transport)|go:"GO:1990573"(potassium ion import across plasma membrane)|interpro:IPR000076(K-Cl co-transporter)|interpro:IPR004841(Amino acid permease-associated region)|interpro:IPR004842(Na-K-Cl cotransporter superfamily)|interpro:IPR018491|interpro:IPR030364|reactome:R-MMU-426117|refseq:NP_598410.2|entrezgene/locuslink:107723(identity) - - author-confidence:1.351078775 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:DsFyn24ksop7mIzunj96LE6yheY10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:O35149 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-642780|uniprotkb:Q3UYZ9|uniprotkb:O35154|ensembl:ENSMUSP00000005952 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:znt4_mouse(display_long)|uniprotkb:Solute carrier family 30 member 4(gene name synonym)|uniprotkb:Lethal milk protein(gene name synonym)|uniprotkb:Slc30a4(gene name)|psi-mi:Slc30a4(display_short)|uniprotkb:Lm(gene name synonym)|uniprotkb:Znt4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_035904.2|ensembl:ENSMUSG00000005802(gene)|ensembl:ENSMUST00000005952(transcript)|go:"GO:0005385"(zinc ion transmembrane transporter activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0009636"(response to toxic substance)|go:"GO:0010043"(response to zinc ion)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031902"(late endosome membrane)|go:"GO:0055069"(zinc ion homeostasis)|go:"GO:0061088"(regulation of sequestering of zinc ion)|go:"GO:0071577"(zinc ion transmembrane transport)|interpro:IPR002524(Cation efflux protein)|interpro:IPR027469|refseq:NP_001277922.1|entrezgene/locuslink:22785(identity) - - author-confidence:7.480288958 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:RzyO1JZ1i4RzClMDZb6BeSXrppU10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:A2A9M5 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11566645|ensembl:ENSMUSP00000030286 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:a2a9m5_mouse(display_long)|uniprotkb:Dock7(gene name)|psi-mi:Dock7(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001277565.1|ensembl:ENSMUSG00000028556(gene)|ensembl:ENSMUST00000030286(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|interpro:IPR035892|interpro:IPR037808|interpro:IPR043161|interpro:IPR043162|go:"GO:0007264"(small GTPase mediated signal transduction)|interpro:IPR010703(Dedicator of cytokinesis)|interpro:IPR021816|interpro:IPR026791|interpro:IPR027007|interpro:IPR027357|entrezgene/locuslink:67299(identity) - - author-confidence:2.215205125 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:CgSJgOizdJ+BnXU1KgXekQUqrpw10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q640N3 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-4326075|uniprotkb:E9QKX0|uniprotkb:Q571I5 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:rhg30_mouse(display_long)|uniprotkb:Arhgap30(gene name)|psi-mi:Arhgap30(display_short)|uniprotkb:Rho-type GTPase-activating protein 30(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001005508.2|interpro:IPR008936(Rho GTPase activation protein)|interpro:IPR000198(RhoGAP)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0043231"(intracellular membrane-bounded organelle)|reactome:R-MMU-8980692|reactome:R-MMU-9013148|reactome:R-MMU-9013149|reactome:R-MMU-9013420|entrezgene/locuslink:226652(identity) - - author-confidence:1.01924426 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:6ThouE4dmXi8MQuZ6odULeofha010090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:E9QLQ7 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11568979|ensembl:ENSMUSP00000027693|ensembl:ENSMUSP00000108005 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:e9qlq7_mouse(display_long)|uniprotkb:Rab7l1(gene name synonym)|uniprotkb:Rab29(gene name)|psi-mi:Rab29(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_659124.2|ensembl:ENSMUSG00000026433(gene)|ensembl:ENSMUST00000027693(transcript)|ensembl:ENSMUST00000112386(transcript)|go:"GO:0001921"(positive regulation of receptor recycling)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005769"(early endosome)|go:"GO:0005773"(vacuole)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007030"(Golgi organization)|go:"GO:0007416"(synapse assembly)|go:"GO:0009617"(response to bacterium)|go:"GO:0010977"(negative regulation of neuron projection development)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019894"(kinesin binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042110"(T cell activation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0050862"(positive regulation of T cell receptor signaling pathway)|go:"GO:0055037"(recycling endosome)|go:"GO:0070840"(dynein complex binding)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090316"(positive regulation of intracellular protein transport)|go:"GO:1901998"(toxin transport)|go:"GO:1905279"(regulation of retrograde transport, endosome to Golgi)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|entrezgene/locuslink:226422(identity) - - author-confidence:26.60031166 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:5+/XPVrzqtcnmQbbuqN2Spz1rW810090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q01965 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11569501|uniprotkb:Q9ES35|uniprotkb:Q9ES36|uniprotkb:Q9ES29|ensembl:ENSMUSP00000069319 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:ly9_mouse(display_long)|uniprotkb:Cell surface molecule Ly-9(gene name synonym)|uniprotkb:Ly-9(gene name synonym)|uniprotkb:Lymphocyte antigen 9(gene name synonym)|uniprotkb:SLAM family member 3(gene name synonym)|uniprotkb:Signaling lymphocytic activation molecule 3(gene name synonym)|uniprotkb:Ly9(gene name)|psi-mi:Ly9(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001264897.1|refseq:NP_032560.2|ensembl:ENSMUSG00000004707(gene)|ensembl:ENSMUST00000068878(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0007155"(cell adhesion)|go:"GO:0009986"(cell surface)|go:"GO:0016021"(integral component of membrane)|go:"GO:0032740"(positive regulation of interleukin-17 production)|go:"GO:0045087"(innate immune response)|go:"GO:0072540"(T-helper 17 cell lineage commitment)|interpro:IPR003599(Immunoglobulin subtype)|interpro:IPR007110(Immunoglobulin-like)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR036179|entrezgene/locuslink:17085(identity) - - author-confidence:1.949237709 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:u1JQR4GuNJZc0Cu1WPQRzpiPPJA10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q9CPP6 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-2934595|ensembl:ENSMUSP00000023851|uniprotkb:Q9CY90|uniprotkb:Q9D2P2|uniprotkb:Q9D703|uniprotkb:Q9D739 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:ndua5_mouse(display_long)|uniprotkb:Ndufa5(gene name)|psi-mi:Ndufa5(display_short)|uniprotkb:Complex I subunit B13(gene name synonym)|uniprotkb:Complex I-13kD-B(gene name synonym)|uniprotkb:NADH-ubiquinone oxidoreductase 13 kDa-B subunit(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) ensembl:ENSMUSG00000023089(gene)|ensembl:ENSMUST00000023851(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005747"(mitochondrial respiratory chain complex I)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0022904"(respiratory electron transport chain)|go:"GO:0032981"(mitochondrial respiratory chain complex I assembly)|go:"GO:0032991"(protein-containing complex)|go:"GO:0045271"(respiratory chain complex I)|interpro:IPR006806(ETC complex I subunit)|mint:Q9CPP6|rcsb pdb:6G2J|rcsb pdb:6G72|rcsb pdb:6ZR2|rcsb pdb:6ZTQ|rcsb pdb:7AK5|rcsb pdb:7AK6|rcsb pdb:7B93|reactome:R-MMU-611105|reactome:R-MMU-6799198|reactome:R-MMU-9013408|refseq:NP_080890.1|entrezgene/locuslink:68202(identity) - - author-confidence:9.480221128 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:XmfRnQ0vfDwf3KjUdlYymXdjfjM10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q99LI2 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11570871|uniprotkb:A2AEK9|ensembl:ENSMUSP00000029483|ensembl:ENSMUSP00000102220 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:clcc1_mouse(display_long)|uniprotkb:Clcc1(gene name)|psi-mi:Clcc1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:XP_017175050.1|refseq:NP_001171242.1|refseq:NP_663518.1|refseq:XP_006501479.1|ensembl:ENSMUSG00000027884(gene)|ensembl:ENSMUST00000029483(transcript)|ensembl:ENSMUST00000106609(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005254"(chloride channel activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006821"(chloride transport)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034707"(chloride channel complex)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|interpro:IPR009231(Mid-1-related chloride channel)|mint:Q99LI2|entrezgene/locuslink:229725(identity) - - author-confidence:1.695943908 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:TfbC1NQI0EaF2nSgmPacsDg+Agk10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q9Z1T1 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-643061|uniprotkb:E9QQ08|uniprotkb:Q91YR4|ensembl:ENSMUSP00000022196 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:ap3b1_mouse(display_long)|uniprotkb:Adaptor protein complex AP-3 subunit beta-1(gene name synonym)|uniprotkb:Beta-3A-adaptin(gene name synonym)|uniprotkb:Clathrin assembly protein complex 3 beta-1 large chain(gene name synonym)|uniprotkb:Ap3b1(gene name)|psi-mi:Ap3b1(display_short)|uniprotkb:Adaptor-related protein complex 3 subunit beta-1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_033810.2|ensembl:ENSMUSG00000021686(gene)|ensembl:ENSMUST00000022196(transcript)|go:"GO:0000902"(cell morphogenesis)|go:"GO:0002224"(toll-like receptor signaling pathway)|go:"GO:0002244"(hematopoietic progenitor cell differentiation)|go:"GO:0003016"(respiratory system process)|go:"GO:0005739"(mitochondrion)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006464"(cellular protein modification process)|go:"GO:0006622"(protein targeting to lysosome)|go:"GO:0006829"(zinc ion transport)|go:"GO:0006882"(cellular zinc ion homeostasis)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006954"(inflammatory response)|go:"GO:0007040"(lysosome organization)|go:"GO:0007283"(spermatogenesis)|go:"GO:0007338"(single fertilization)|go:"GO:0007596"(blood coagulation)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0016182"(synaptic vesicle budding from endosome)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0030123"(AP-3 adaptor complex)|go:"GO:0030131"(clathrin adaptor complex)|go:"GO:0030324"(lung development)|go:"GO:0030665"(clathrin-coated vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0030851"(granulocyte differentiation)|go:"GO:0032438"(melanosome organization)|go:"GO:0034394"(protein localization to cell surface)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0043473"(pigmentation)|go:"GO:0045202"(synapse)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048007"(antigen processing and presentation, exogenous lipid antigen via MHC class Ib)|go:"GO:0048490"(anterograde synaptic vesicle transport)|go:"GO:0048872"(homeostasis of number of cells)|go:"GO:0050790"(regulation of catalytic activity)|go:"GO:0051138"(positive regulation of NK T cell differentiation)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0060425"(lung morphogenesis)|go:"GO:0061024"(membrane organization)|go:"GO:0090152"(establishment of protein localization to mitochondrial membrane involved in mitochondrial fission)|go:"GO:0098773"(skin epidermis development)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR002553(Clathrin/coatomer adaptor, adaptin-like, N-terminal)|interpro:IPR015151(Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR026739|interpro:IPR026740|interpro:IPR029390|interpro:IPR029394|mint:Q9Z1T1|reactome:R-MMU-432722|dip:DIP-49018N|entrezgene/locuslink:11774(identity) - - author-confidence:1.413732844 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:Xtcoo5Kk0ZYpVbr+WEBfVxidkVU10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q9JIS8 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11566383|uniprotkb:O55069|uniprotkb:Q9ET57|ensembl:ENSMUSP00000112130 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:s12a4_mouse(display_long)|uniprotkb:Electroneutral potassium-chloride cotransporter 1(gene name synonym)|uniprotkb:Erythroid K-Cl cotransporter 1(gene name synonym)|uniprotkb:Kcc1(gene name synonym)|uniprotkb:Slc12a4(gene name)|psi-mi:Slc12a4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_033221.1|ensembl:ENSMUST00000116429(transcript)|go:"GO:0006884"(cell volume homeostasis)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0015379"("potassium:chloride symporter activity")|go:"GO:0016021"(integral component of membrane)|go:"GO:0019901"(protein kinase binding)|go:"GO:0045202"(synapse)|go:"GO:0055064"(chloride ion homeostasis)|go:"GO:0055075"(potassium ion homeostasis)|go:"GO:1902476"(chloride transmembrane transport)|go:"GO:1990573"(potassium ion import across plasma membrane)|interpro:IPR000076(K-Cl co-transporter)|interpro:IPR000622(K-Cl Co-transporter, type 1)|interpro:IPR004841(Amino acid permease-associated region)|interpro:IPR004842(Na-K-Cl cotransporter superfamily)|interpro:IPR018491|reactome:R-MMU-426117|ensembl:ENSMUSG00000017765(gene)|entrezgene/locuslink:20498(identity) - - author-confidence:2.852455915 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:QbxF/FzOycoNIBPRshFAo1J84Us10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:A2A891 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11570851|uniprotkb:A2A892|uniprotkb:A2A897|uniprotkb:A2A896|uniprotkb:B2KGR4|uniprotkb:Q80TQ8|uniprotkb:B2KGR3|uniprotkb:A2A898|ensembl:ENSMUSP00000054804|ensembl:ENSMUSP00000127916 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:cmta1_mouse(display_long)|uniprotkb:Kiaa0833(gene name synonym)|uniprotkb:Camta1(gene name)|psi-mi:Camta1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001075026.1|ensembl:ENSMUSG00000014592(gene)|ensembl:ENSMUST00000049790(transcript)|ensembl:ENSMUST00000169423(transcript)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0035307"(positive regulation of protein dephosphorylation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050885"(neuromuscular process controlling balance)|go:"GO:0070886"(positive regulation of calcineurin-NFAT signaling cascade)|interpro:IPR000048(IQ calmodulin-binding region)|interpro:IPR002110(Ankyrin)|interpro:IPR002909(Cell surface receptor IPT/TIG)|interpro:IPR005559(CG-1)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR036770|interpro:IPR039033|entrezgene/locuslink:7741381(identity) - - author-confidence:4.860956162 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:0Q7lpIbkUMikni6RIHvhCmhbceE10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8CFZ4 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11566294|ensembl:ENSMUSP00000064131 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:gpc3_mouse(display_long)|uniprotkb:Gpc3(gene name)|psi-mi:Gpc3(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_057906.2|ensembl:ENSMUSG00000055653(gene)|ensembl:ENSMUST00000069360(transcript)|go:"GO:0001658"(branching involved in ureteric bud morphogenesis)|go:"GO:0001822"(kidney development)|go:"GO:0005764"(lysosome)|go:"GO:0005796"(Golgi lumen)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009617"(response to bacterium)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0009948"(anterior/posterior axis specification)|go:"GO:0009986"(cell surface)|go:"GO:0010171"(body morphogenesis)|go:"GO:0010466"(negative regulation of peptidase activity)|go:"GO:0016477"(cell migration)|go:"GO:0030282"(bone mineralization)|go:"GO:0030316"(osteoclast differentiation)|go:"GO:0030324"(lung development)|go:"GO:0030513"(positive regulation of BMP signaling pathway)|go:"GO:0035116"(embryonic hindlimb morphogenesis)|go:"GO:0040008"(regulation of growth)|go:"GO:0042074"(cell migration involved in gastrulation)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0045807"(positive regulation of endocytosis)|go:"GO:0045879"(negative regulation of smoothened signaling pathway)|go:"GO:0045880"(positive regulation of smoothened signaling pathway)|go:"GO:0045926"(negative regulation of growth)|go:"GO:0046326"(positive regulation of glucose import)|go:"GO:0046658"(anchored component of plasma membrane)|go:"GO:0050680"(negative regulation of epithelial cell proliferation)|go:"GO:0060422"(peptidyl-dipeptidase inhibitor activity)|go:"GO:0060828"(regulation of canonical Wnt signaling pathway)|go:"GO:0060976"(coronary vasculature development)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0072111"(cell proliferation involved in kidney development)|go:"GO:0072138"(mesenchymal cell proliferation involved in ureteric bud development)|go:"GO:0072180"(mesonephric duct morphogenesis)|go:"GO:0072203"(cell proliferation involved in metanephros development)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:0090263"(positive regulation of canonical Wnt signaling pathway)|go:"GO:1905475"(regulation of protein localization to membrane)|go:"GO:2000050"(regulation of non-canonical Wnt signaling pathway)|go:"GO:2000096"(positive regulation of Wnt signaling pathway, planar cell polarity pathway)|interpro:IPR001863(Glypican)|interpro:IPR015501(Glypican 3)|interpro:IPR019803|reactome:R-MMU-1971475|reactome:R-MMU-2022928|reactome:R-MMU-2024096|reactome:R-MMU-381426|reactome:R-MMU-8957275|reactome:R-MMU-975634|entrezgene/locuslink:14734(identity) - - author-confidence:1.58937844 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:HmsJuKaE1Tz2SqFkBWtuN9PONDA10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:F8WI37 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11570863|ensembl:ENSMUSP00000043874 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:f8wi37_mouse(display_long)|uniprotkb:Mll3(gene name synonym)|uniprotkb:Kmt2c(gene name)|psi-mi:Kmt2c(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001074852.1|ensembl:ENSMUSG00000038056(gene)|ensembl:ENSMUST00000045291(transcript)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0042800"("histone methyltransferase activity (H3-K4 specific)")|go:"GO:0044666"(MLL3/4 complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097692"(histone H3-K4 monomethylation)|interpro:IPR000637(HMG-I and HMG-Y, DNA-binding)|interpro:IPR001214(SET)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR003616(Post-SET zinc-binding region)|interpro:IPR003888(FY-rich, N-terminal)|interpro:IPR003889(FY-rich, C-terminal)|interpro:IPR009071(High mobility group box, HMG)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019787|interpro:IPR034732|interpro:IPR036910|interpro:IPR037877|interpro:IPR041967|interpro:IPR041968|entrezgene/locuslink:231051(identity) - - author-confidence:4.059126877 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:fQBU/yjNyy9u4lCNGF/Hp4PGzxc10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q91WF7 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11570846|uniprotkb:Q6A092|ensembl:ENSMUSP00000039598 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:fig4_mouse(display_long)|uniprotkb:Kiaa0274(gene name synonym)|uniprotkb:Phosphatidylinositol 3,5-bisphosphate 5-phosphatase(gene name synonym)|uniprotkb:SAC domain-containing protein 3(gene name synonym)|uniprotkb:Sac3(gene name synonym)|uniprotkb:Fig4(gene name)|psi-mi:Fig4(display_short)|uniprotkb:Serine-protein phosphatase FIG4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_598760.1|ensembl:ENSMUSG00000038417(gene)|ensembl:ENSMUST00000043814(transcript)|go:"GO:0004438"(phosphatidylinositol-3-phosphatase activity)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0007033"(vacuole organization)|go:"GO:0007626"(locomotory behavior)|go:"GO:0010008"(endosome membrane)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0031642"(negative regulation of myelination)|go:"GO:0032288"(myelin assembly)|go:"GO:0034593"(phosphatidylinositol bisphosphate phosphatase activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043473"(pigmentation)|go:"GO:0043812"(phosphatidylinositol-4-phosphate phosphatase activity)|go:"GO:0043813"(phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity)|go:"GO:0046488"(phosphatidylinositol metabolic process)|go:"GO:0046856"(phosphatidylinositol dephosphorylation)|go:"GO:0048666"(neuron development)|go:"GO:0055037"(recycling endosome)|interpro:IPR002013(Synaptojanin, N-terminal)|interpro:IPR043573|reactome:R-MMU-1660514|reactome:R-MMU-1660516|reactome:R-MMU-1660517|entrezgene/locuslink:103199(identity) - - author-confidence:3.441511266 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:1GKEysN8Ljrg29/Rh/bXei9leAU10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q5DU37 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11569031|uniprotkb:Q923B4|uniprotkb:B9EJ71|uniprotkb:Q8CDR8|uniprotkb:Q3TEM9|uniprotkb:Q3V1N3|uniprotkb:Q8BY74|ensembl:ENSMUSP00000021547 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:zfy26_mouse(display_long)|uniprotkb:Kiaa0321(gene name synonym)|uniprotkb:Zfyve26(gene name)|psi-mi:Zfyve26(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_001008550.1|ensembl:ENSMUSG00000066440(gene)|ensembl:ENSMUST00000021547(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0030496"(midbody)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0046872"(metal ion binding)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR028730|entrezgene/locuslink:211978(identity) - - author-confidence:5.769172413 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:g7K/XypoTRwki8oHTYjAnU447Y010090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:O35129 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-445002|uniprotkb:O89075|uniprotkb:Q61336|ensembl:ENSMUSP00000004375 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:phb2_mouse(display_long)|uniprotkb:B-cell receptor-associated protein BAP37(gene name synonym)|uniprotkb:Repressor of estrogen receptor activity(gene name synonym)|uniprotkb:Phb2(gene name)|psi-mi:Phb2(display_short)|uniprotkb:Bap(gene name synonym)|uniprotkb:Bcap37(gene name synonym)|uniprotkb:Rea(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_031557.2|go:"GO:0046625"(sphingolipid binding)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0050821"(protein stabilization)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0060744"(mammary gland branching involved in thelarche)|go:"GO:0060749"(mammary gland alveolus development)|go:"GO:0060762"(regulation of branching involved in mammary gland duct morphogenesis)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0071300"(cellular response to retinoic acid)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071944"(cell periphery)|go:"GO:0098800"(inner mitochondrial membrane protein complex)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0140374"(antiviral innate immune response)|go:"GO:1900208"(regulation of cardiolipin metabolic process)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1904959"(regulation of cytochrome-c oxidase activity)|go:"GO:1990051"(activation of protein kinase C activity)|interpro:IPR000163(Prohibitin)|interpro:IPR001107(Band 7 protein)|interpro:IPR036013|mint:O35129|reactome:R-MMU-8949664|go:"GO:1902808"(positive regulation of cell cycle G1/S phase transition)|ensembl:ENSMUSG00000004264(gene)|ensembl:ENSMUST00000004375(transcript)|go:"GO:0000423"(mitophagy)|go:"GO:0002639"(positive regulation of immunoglobulin production)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0007202"(activation of phospholipase C activity)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009611"(response to wounding)|go:"GO:0009986"(cell surface)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016363"(nuclear matrix)|go:"GO:0023035"(CD40 signaling pathway)|go:"GO:0030424"(axon)|go:"GO:0031536"(positive regulation of exit from mitosis)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0033218"(amide binding)|go:"GO:0033600"(negative regulation of mammary gland epithelial cell proliferation)|go:"GO:0035632"(mitochondrial prohibitin complex)|go:"GO:0039520"(induction by virus of host autophagy)|go:"GO:0039529"(RIG-I signaling pathway)|go:"GO:0042113"(B cell activation)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0016477"(cell migration)|entrezgene/locuslink:12034(identity) - - author-confidence:18.16789506 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:h4pib54mBeQgOKCe/hib58LM26w10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q3TBD2 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11569517|uniprotkb:Q8BI83|uniprotkb:Q3TSW0|uniprotkb:Q3TXM6|uniprotkb:Q3UZ72|uniprotkb:Q3TDD2|uniprotkb:Q9CU46 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:hmha1_mouse(display_long)|uniprotkb:Arhgap45(gene name)|psi-mi:Arhgap45(display_short)|uniprotkb:Hmha1(gene name synonym)|uniprotkb:Minor histocompatibility protein HA-1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) interpro:IPR027267|reactome:R-MMU-6798695|reactome:R-MMU-8980692|reactome:R-MMU-9013148|reactome:R-MMU-9013149|interpro:IPR000198(RhoGAP)|interpro:IPR001060(Cdc15/Fes/CIP4)|interpro:IPR002219(Protein kinase C, phorbol ester/diacylglycerol binding)|interpro:IPR008936(Rho GTPase activation protein)|interpro:IPR031160|refseq:NP_001136173.1|refseq:NP_081797.1|refseq:NP_001334003.1|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0032587"(ruffle membrane)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0046872"(metal ion binding)|go:"GO:0090630"(activation of GTPase activity)|entrezgene/locuslink:70719(identity) - - author-confidence:3.351903452 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:qRGZ7VRf87D+9YlzAdWJNGJJ6Bg10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:F8WGW3 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11569048|ensembl:ENSMUSP00000092810 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:f8wgw3_mouse(display_long)|uniprotkb:Srbd1(gene name)|psi-mi:Srbd1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_084409.3|ensembl:ENSMUSG00000024135(gene)|ensembl:ENSMUST00000095187(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006139"(nucleobase-containing compound metabolic process)|interpro:IPR003029(S1, RNA binding)|interpro:IPR006641(Resolvase, RNase H-like fold)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR018974|interpro:IPR022967|interpro:IPR023319|interpro:IPR023323|interpro:IPR032639|interpro:IPR037027|interpro:IPR041692|interpro:IPR044146|entrezgene/locuslink:78586(identity) - - author-confidence:4.962702086 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:u7o4S3hy4AeslIj/Nqt5s+yCRPY10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q8CDG3 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-646144|uniprotkb:Q7TMU9|uniprotkb:Q8BP90 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:vcip1_mouse(display_long)|uniprotkb:Valosin-containing protein p97/p47 complex-interacting protein p135(gene name synonym)|uniprotkb:Valosin-containing protein p97/p47 complex-interacting protein 1(gene name synonym)|uniprotkb:Vcpip1(gene name)|psi-mi:Vcpip1(display_short)|uniprotkb:Vcip135(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) interpro:IPR029071|refseq:NP_775619.2|interpro:IPR003323(Ovarian tumour, otubain)|mint:Q8CDG3|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005795"(Golgi stack)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007030"(Golgi organization)|go:"GO:0016320"(endoplasmic reticulum membrane fusion)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0035871"(protein K11-linked deubiquitination)|go:"GO:0045202"(synapse)|go:"GO:0071108"(protein K48-linked deubiquitination)|go:"GO:0090168"(Golgi reassembly)|go:"GO:0106300"(protein-DNA covalent cross-linking repair)|go:"GO:1905634"(regulation of protein localization to chromatin)|reactome:R-MMU-5689896|interpro:IPR039087|entrezgene/locuslink:70675(identity) - - author-confidence:5.863599771 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:jTwHlp3wXtIw4o5+Oqvb47HbKEk10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q9QXK2 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-11568956|uniprotkb:Q9CZB8|ensembl:ENSMUSP00000076341 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:rad18_mouse(display_long)|uniprotkb:Postreplication repair protein RAD18(gene name synonym)|uniprotkb:Rad18sc(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase RAD18(gene name synonym)|uniprotkb:Rad18(gene name)|psi-mi:Rad18(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_067360.2|ensembl:ENSMUSG00000030254(gene)|ensembl:ENSMUST00000077088(transcript)|go:"GO:0000403"(Y-form DNA binding)|go:"GO:0000785"(chromatin)|go:"GO:0001741"(XY body)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005657"(replication fork)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0006301"(postreplication repair)|go:"GO:0006513"(protein monoubiquitination)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007283"(spermatogenesis)|go:"GO:0009411"(response to UV)|go:"GO:0016604"(nuclear body)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0035861"(site of double-strand break)|go:"GO:0042405"(nuclear inclusion body)|go:"GO:0042802"(identical protein binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0051984"(positive regulation of chromosome segregation)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0097505"(Rad6-Rad18 complex)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003034(DNA-binding SAP)|interpro:IPR006642(Zinc finger, Rad18-type putative)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR036361|interpro:IPR039577|reactome:R-MMU-110314|reactome:R-MMU-8866654|entrezgene/locuslink:58186(identity) - - author-confidence:2.011713276 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:BLRtgSEXhMs7UjsHlKE8PhKNsr010090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q64010 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-2906540|ensembl:ENSMUSP00000017920 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:crk_mouse(display_long)|uniprotkb:Crk(gene name)|psi-mi:Crk(display_short)|uniprotkb:Crko(gene name synonym)|uniprotkb:Proto-oncogene c-Crk(gene name synonym)|uniprotkb:p38(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:NP_598417.2|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|ensembl:ENSMUSG00000017776(gene)|ensembl:ENSMUST00000017920(transcript)|go:"GO:0001764"(neuron migration)|go:"GO:0001784"(phosphotyrosine residue binding)|go:"GO:0001878"(response to yeast)|go:"GO:0006629"(lipid metabolic process)|go:"GO:0008092"(cytoskeletal protein binding)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0002685"(regulation of leukocyte migration)|go:"GO:0009966"(regulation of signal transduction)|go:"GO:0005159"(insulin-like growth factor receptor binding)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016358"(dendrite development)|go:"GO:0017124"(SH3 domain binding)|go:"GO:0019899"(enzyme binding)|go:"GO:0019900"(kinase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021766"(hippocampus development)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030159"(signaling receptor complex adaptor activity)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033628"(regulation of cell adhesion mediated by integrin)|go:"GO:0035020"(regulation of Rac protein signal transduction)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0035728"(response to hepatocyte growth factor)|go:"GO:0038026"(reelin-mediated signaling pathway)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0043087"(regulation of GTPase activity)|go:"GO:0043393"(regulation of protein binding)|go:"GO:0043621"(protein self-association)|go:"GO:0045121"(membrane raft)|go:"GO:0045309"(protein phosphorylated amino acid binding)|go:"GO:0045953"(negative regulation of natural killer cell mediated cytotoxicity)|go:"GO:0046875"(ephrin receptor binding)|go:"GO:0048013"(ephrin receptor signaling pathway)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0060326"(cell chemotaxis)|go:"GO:0061045"(negative regulation of wound healing)|go:"GO:0061847"(response to cholecystokinin)|go:"GO:0071560"(cellular response to transforming growth factor beta stimulus)|go:"GO:0071732"(cellular response to nitric oxide)|go:"GO:0090630"(activation of GTPase activity)|go:"GO:0097110"(scaffold protein binding)|go:"GO:0098749"(cerebellar neuron development)|go:"GO:1900026"(positive regulation of substrate adhesion-dependent cell spreading)|go:"GO:1901652"(response to peptide)|go:"GO:1902531"(regulation of intracellular signal transduction)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|go:"GO:1990314"(cellular response to insulin-like growth factor stimulus)|go:"GO:1990782"(protein tyrosine kinase binding)|go:"GO:1990859"(cellular response to endothelin)|go:"GO:2000146"(negative regulation of cell motility)|go:"GO:2000404"(regulation of T cell migration)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR035457|interpro:IPR035458|interpro:IPR036028|interpro:IPR036860|rcsb pdb:1B07|rcsb pdb:1CKA|rcsb pdb:1CKB|rcsb pdb:1JU5|rcsb pdb:1M30|rcsb pdb:1M3A|rcsb pdb:1M3B|rcsb pdb:1M3C|rcsb pdb:2GGR|rcsb pdb:5IH2|rcsb pdb:5JN0|rcsb pdb:5L23|reactome:R-MMU-170984|reactome:R-MMU-186763|reactome:R-MMU-2029482|reactome:R-MMU-372708|reactome:R-MMU-4420097|reactome:R-MMU-8849471|reactome:R-MMU-8875555|reactome:R-MMU-8875656|reactome:R-MMU-912631|go:"GO:0035685"(helper T cell diapedesis)|dip:DIP-57059N|entrezgene/locuslink:12928(identity) - - author-confidence:12.61096107 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:e9eU7+wkCP5FNnenBlIixVbL7UM10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:P67778 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-298507|uniprotkb:P24142|uniprotkb:Q3UB75|uniprotkb:Q5SQG4|ensembl:ENSMUSP00000119603 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:phb_mouse(display_long)|uniprotkb:Phb(gene name)|psi-mi:Phb(display_short)|uniprotkb:B-cell receptor-associated protein 32(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) ensembl:ENSMUSG00000038845(gene)|ensembl:ENSMUST00000125172(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001541"(ovarian follicle development)|go:"GO:0001552"(ovarian follicle atresia)|go:"GO:0001850"(complement component C3a binding)|go:"GO:0001851"(complement component C3b binding)|go:"GO:0002639"(positive regulation of immunoglobulin production)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007202"(activation of phospholipase C activity)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009986"(cell surface)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0010944"(negative regulation of transcription by competitive promoter binding)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016575"(histone deacetylation)|go:"GO:0019899"(enzyme binding)|go:"GO:0023035"(CD40 signaling pathway)|go:"GO:0030061"(mitochondrial crista)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0031100"(animal organ regeneration)|go:"GO:0031315"(extrinsic component of mitochondrial outer membrane)|go:"GO:0031871"(proteinase activated receptor binding)|go:"GO:0032740"(positive regulation of interleukin-17 production)|go:"GO:0035632"(mitochondrial prohibitin complex)|go:"GO:0035902"(response to immobilization stress)|go:"GO:0042113"(B cell activation)|go:"GO:0042177"(negative regulation of protein catabolic process)|go:"GO:0042493"|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0039529"(RIG-I signaling pathway)|go:"GO:0044830"(modulation by host of viral RNA genome replication)|go:"GO:0045471"(response to ethanol)|go:"GO:0045745"(positive regulation of G protein-coupled receptor signaling pathway)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045917"(positive regulation of complement activation)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0050821"(protein stabilization)|go:"GO:0050847"(progesterone receptor signaling pathway)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0060766"(negative regulation of androgen receptor signaling pathway)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0071354"(cellular response to interleukin-6)|go:"GO:0071897"(DNA biosynthetic process)|go:"GO:0072538"(T-helper 17 type immune response)|go:"GO:0098891"(extrinsic component of presynaptic active zone membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0140374"(antiviral innate immune response)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1990051"(activation of protein kinase C activity)|go:"GO:2000323"(negative regulation of glucocorticoid receptor signaling pathway)|interpro:IPR000163(Prohibitin)|interpro:IPR001107(Band 7 protein)|interpro:IPR036013|mint:P67778|reactome:R-MMU-5673000|reactome:R-MMU-8949664|refseq:NP_032857.1|entrezgene/locuslink:18673(identity) - - author-confidence:23.14452027 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:eUStcZ9Mu7+7MHr/GJXFwwJY/Fc10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9CZE3 uniprotkb:Q811G0 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 intact:EBI-6127691|uniprotkb:P97498|uniprotkb:Q3UMR2|uniprotkb:Q7TQH9|uniprotkb:Q8BKD7|uniprotkb:Q8K0T5|ensembl:ENSMUSP00000120927 psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:pthb1_mouse(display_long)|uniprotkb:Bbs9(gene name)|psi-mi:Bbs9(display_short)|uniprotkb:Pthb1(gene name synonym)|uniprotkb:Bardet-Biedl syndrome 9 protein homolog(gene name synonym)|uniprotkb:Parathyroid hormone-responsive B1 gene protein homolog(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11570876|imex:IM-24977-48 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) refseq:XP_006510478.1|refseq:XP_006510479.1|refseq:XP_006510480.1|refseq:XP_006510481.1|refseq:XP_006510482.1|refseq:NP_848502.1|refseq:NP_851833.2|ensembl:ENSMUSG00000035919(gene)|ensembl:ENSMUST00000147405(transcript)|go:"GO:0000242"(pericentriolar material)|go:"GO:0005737"(cytoplasm)|go:"GO:0005929"(cilium)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0034451"(centriolar satellite)|go:"GO:0034464"(BBSome)|go:"GO:0035869"(ciliary transition zone)|go:"GO:0036064"(ciliary basal body)|go:"GO:0045444"(fat cell differentiation)|go:"GO:0060170"(ciliary membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0061512"(protein localization to cilium)|interpro:IPR026511|interpro:IPR028073|interpro:IPR028074|reactome:R-MMU-5620922|entrezgene/locuslink:319845(identity) - - author-confidence:7.480288958 figure legend:Table S5, fig. 7A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 rogid:sZIkJkIaNYEhrEujD3WS4KO76Yw10090 intact-crc:F373899990265A56|rigid:Ib527wzBbC/1ayG4nkqeWlkAUXA false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D0P8 uniprotkb:Q61703 intact:EBI-11571155|ensembl:ENSMUSP00000016781 intact:EBI-8316605|intact:MINT-4099077|uniprotkb:Q3UZM0|uniprotkb:A2AKU6 psi-mi:ift27_mouse(display_long)|uniprotkb:Putative GTP-binding protein RAY-like(gene name synonym)|uniprotkb:Rab-like protein 4(gene name synonym)|uniprotkb:Rabl4(gene name synonym)|uniprotkb:Rayl(gene name synonym)|uniprotkb:Ift27(gene name)|psi-mi:Ift27(display_short) psi-mi:itih2_mouse(display_long)|uniprotkb:Itih2(gene name)|psi-mi:Itih2(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571153|imex:IM-24977-50 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080207.1|ensembl:ENSMUSG00000016637(gene)|ensembl:ENSMUST00000016781(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001822"(kidney development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007224"(smoothened signaling pathway)|go:"GO:0007283"(spermatogenesis)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0036126"(sperm flagellum)|go:"GO:0042073"(intraciliary transport)|go:"GO:0060122"(inner ear receptor cell stereocilium organization)|go:"GO:0090102"(cochlea development)|go:"GO:0097225"(sperm midpiece)|go:"GO:0097228"(sperm principal piece)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67042(identity) go:"GO:0004867"(serine-type endopeptidase inhibitor activity)|go:"GO:0005576"(extracellular region)|go:"GO:0030212"(hyaluronan metabolic process)|go:"GO:0062023"(collagen-containing extracellular matrix)|reactome:R-MMU-381426|reactome:R-MMU-8957275|refseq:NP_034712.2|mint:Q61703|interpro:IPR036465|interpro:IPR002035(von Willebrand factor, type A)|interpro:IPR010600(Inter-alpha-trypsin inhibitor heavy chain, C-terminal)|interpro:IPR013694(Vault protein inter-alpha-trypsin)|entrezgene/locuslink:16425(identity) - - function:May act as a carrier of hyaluronan in serum or as a binding protein between hyaluronan and other matrix protein, including those on cell surfaces in tissues to regulate the localization, synthesis and degradation of hyaluronan which are essential to cells undergoing biological processes|comment:mint|author-confidence:6.693453810027864 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W40iL1kYv1vZPasVPC6luPR4FNo10090 rogid:cUeRub5rHmKrQ5dfkwlREoGi4GE10090 intact-crc:84FCDAE756F2D85C|rigid:S+ISHsOlpAx/6RjnYYAMbVI8my0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D0P8 uniprotkb:P01027 intact:EBI-11571155|ensembl:ENSMUSP00000016781 intact:EBI-4281083|uniprotkb:Q80XP1|ensembl:ENSMUSP00000024988|uniprotkb:Q61370 psi-mi:ift27_mouse(display_long)|uniprotkb:Putative GTP-binding protein RAY-like(gene name synonym)|uniprotkb:Rab-like protein 4(gene name synonym)|uniprotkb:Rabl4(gene name synonym)|uniprotkb:Rayl(gene name synonym)|uniprotkb:Ift27(gene name)|psi-mi:Ift27(display_short) psi-mi:co3_mouse(display_long)|uniprotkb:C3(gene name)|psi-mi:C3(display_short)|uniprotkb:HSE-MSF(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571153|imex:IM-24977-50 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080207.1|ensembl:ENSMUSG00000016637(gene)|ensembl:ENSMUST00000016781(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001822"(kidney development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007224"(smoothened signaling pathway)|go:"GO:0007283"(spermatogenesis)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0036126"(sperm flagellum)|go:"GO:0042073"(intraciliary transport)|go:"GO:0060122"(inner ear receptor cell stereocilium organization)|go:"GO:0090102"(cochlea development)|go:"GO:0097225"(sperm midpiece)|go:"GO:0097228"(sperm principal piece)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67042(identity) ensembl:ENSMUSG00000024164(gene)|ensembl:ENSMUST00000024988(transcript)|go:"GO:0001798"(positive regulation of type IIa hypersensitivity)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0001970"(positive regulation of activation of membrane attack complex)|go:"GO:0004866"(endopeptidase inhibitor activity)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0006631"(fatty acid metabolic process)|go:"GO:0006954"(inflammatory response)|go:"GO:0006956"(complement activation)|go:"GO:0006957"(complement activation, alternative pathway)|go:"GO:0006958"(complement activation, classical pathway)|go:"GO:0007596"(blood coagulation)|go:"GO:0008289"(lipid binding)|go:"GO:0009617"(response to bacterium)|go:"GO:0009986"(cell surface)|go:"GO:0010575"(positive regulation of vascular endothelial growth factor production)|go:"GO:0010828"(positive regulation of glucose transmembrane transport)|go:"GO:0010866"(regulation of triglyceride biosynthetic process)|go:"GO:0010884"(positive regulation of lipid storage)|go:"GO:0016322"(neuron remodeling)|go:"GO:0031715"(C5L2 anaphylatoxin chemotactic receptor binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0035846"(oviduct epithelium development)|go:"GO:0045745"(positive regulation of G protein-coupled receptor signaling pathway)|go:"GO:0045766"(positive regulation of angiogenesis)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0048639"(positive regulation of developmental growth)|go:"GO:0050766"(positive regulation of phagocytosis)|go:"GO:0060100"(positive regulation of phagocytosis, engulfment)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0097242"(amyloid-beta clearance)|go:"GO:0097278"(complement-dependent cytotoxicity)|go:"GO:0150062"(complement-mediated synapse pruning)|go:"GO:0150064"(vertebrate eye-specific patterning)|go:"GO:1905114"(cell surface receptor signaling pathway involved in cell-cell signaling)|go:"GO:2000427"(positive regulation of apoptotic cell clearance)|interpro:IPR000020(Anaphylatoxin/fibulin)|interpro:IPR001134(Netrin, C-terminal)|interpro:IPR001599(Alpha-2-macroglobulin)|interpro:IPR001840(Complement C3a/C4a/C5a anaphylatoxin)|interpro:IPR002890(Alpha-2-macroglobulin, N-terminal)|interpro:IPR008930(Terpenoid cylases/protein prenyltransferase alpha-alpha toroid)|interpro:IPR008993(TIMP-like, OB-fold)|interpro:IPR009048(Alpha-macroglobulin, receptor-binding)|interpro:IPR011625(Alpha-2-macroglobulin, N-terminal 2)|interpro:IPR011626(A-macroglobulin complement component)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR018081|interpro:IPR018933|interpro:IPR019742|interpro:IPR035711|interpro:IPR035815|interpro:IPR036595|interpro:IPR040839|interpro:IPR041425|interpro:IPR041555|mint:P01027|rcsb pdb:6XZU|reactome:R-MMU-173736|reactome:R-MMU-174577|reactome:R-MMU-198933|reactome:R-MMU-375276|reactome:R-MMU-381426|reactome:R-MMU-418594|reactome:R-MMU-6798695|reactome:R-MMU-8957275|reactome:R-MMU-977606|refseq:NP_033908.2|entrezgene/locuslink:12266(identity) - - author-confidence:4.226204395066929 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W40iL1kYv1vZPasVPC6luPR4FNo10090 rogid:VGFRYhKETrS9O7cyeJZyxBFgBL410090 intact-crc:84FCDAE756F2D85C|rigid:S+ISHsOlpAx/6RjnYYAMbVI8my0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D0P8 uniprotkb:Q99LI2 intact:EBI-11571155|ensembl:ENSMUSP00000016781 intact:EBI-11570871|uniprotkb:A2AEK9|ensembl:ENSMUSP00000029483|ensembl:ENSMUSP00000102220 psi-mi:ift27_mouse(display_long)|uniprotkb:Putative GTP-binding protein RAY-like(gene name synonym)|uniprotkb:Rab-like protein 4(gene name synonym)|uniprotkb:Rabl4(gene name synonym)|uniprotkb:Rayl(gene name synonym)|uniprotkb:Ift27(gene name)|psi-mi:Ift27(display_short) psi-mi:clcc1_mouse(display_long)|uniprotkb:Clcc1(gene name)|psi-mi:Clcc1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571153|imex:IM-24977-50 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080207.1|ensembl:ENSMUSG00000016637(gene)|ensembl:ENSMUST00000016781(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001822"(kidney development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007224"(smoothened signaling pathway)|go:"GO:0007283"(spermatogenesis)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0036126"(sperm flagellum)|go:"GO:0042073"(intraciliary transport)|go:"GO:0060122"(inner ear receptor cell stereocilium organization)|go:"GO:0090102"(cochlea development)|go:"GO:0097225"(sperm midpiece)|go:"GO:0097228"(sperm principal piece)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67042(identity) refseq:XP_017175050.1|refseq:NP_001171242.1|refseq:NP_663518.1|refseq:XP_006501479.1|ensembl:ENSMUSG00000027884(gene)|ensembl:ENSMUST00000029483(transcript)|ensembl:ENSMUST00000106609(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005254"(chloride channel activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006821"(chloride transport)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034707"(chloride channel complex)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|interpro:IPR009231(Mid-1-related chloride channel)|mint:Q99LI2|entrezgene/locuslink:229725(identity) - - author-confidence:3.408845469361089 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W40iL1kYv1vZPasVPC6luPR4FNo10090 rogid:TfbC1NQI0EaF2nSgmPacsDg+Agk10090 intact-crc:84FCDAE756F2D85C|rigid:S+ISHsOlpAx/6RjnYYAMbVI8my0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D0P8 uniprotkb:A2AN08 intact:EBI-11571155|ensembl:ENSMUSP00000016781 intact:EBI-4285947|uniprotkb:A2AN07|uniprotkb:A2AN09|uniprotkb:A2AN10|uniprotkb:A2AN11|uniprotkb:Q52KI4|uniprotkb:Q6PB49|uniprotkb:Q6PFC7|uniprotkb:Q80Y11|uniprotkb:Q8BGB9|uniprotkb:Q8C3E8|uniprotkb:Q8C4W5|uniprotkb:Q8C8X7|uniprotkb:Q8CGE0|uniprotkb:Q8CHF3|ensembl:ENSMUSP00000095433 psi-mi:ift27_mouse(display_long)|uniprotkb:Putative GTP-binding protein RAY-like(gene name synonym)|uniprotkb:Rab-like protein 4(gene name synonym)|uniprotkb:Rabl4(gene name synonym)|uniprotkb:Rayl(gene name synonym)|uniprotkb:Ift27(gene name)|psi-mi:Ift27(display_short) psi-mi:ubr4_mouse(display_long)|uniprotkb:Kiaa0462(gene name synonym)|uniprotkb:Zubr1(gene name synonym)|uniprotkb:N-recognin-4(gene name synonym)|uniprotkb:Ubr4(gene name)|psi-mi:Ubr4(display_short)|uniprotkb:Zinc finger UBR1-type protein 1(gene name synonym)|uniprotkb:p600(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase UBR4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571153|imex:IM-24977-50 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080207.1|ensembl:ENSMUSG00000016637(gene)|ensembl:ENSMUST00000016781(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001822"(kidney development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007224"(smoothened signaling pathway)|go:"GO:0007283"(spermatogenesis)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0036126"(sperm flagellum)|go:"GO:0042073"(intraciliary transport)|go:"GO:0060122"(inner ear receptor cell stereocilium organization)|go:"GO:0090102"(cochlea development)|go:"GO:0097225"(sperm midpiece)|go:"GO:0097228"(sperm principal piece)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67042(identity) refseq:NP_001153791.1|dip:DIP-61499N|ensembl:ENSMUSG00000066036(gene)|ensembl:ENSMUST00000097822(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR003126(Zinc finger, N-recognin)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR025704|interpro:IPR036322|mint:A2AN08|reactome:R-MMU-6798695|reactome:R-MMU-983168|go:"GO:0016021"(integral component of membrane)|entrezgene/locuslink:69116(identity) - - author-confidence:3.837963367897197 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W40iL1kYv1vZPasVPC6luPR4FNo10090 rogid:dTpQoZkH0+rwfrguOvzwrbPh0+Y10090 intact-crc:84FCDAE756F2D85C|rigid:S+ISHsOlpAx/6RjnYYAMbVI8my0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D0P8 uniprotkb:O54774 intact:EBI-11571155|ensembl:ENSMUSP00000016781 intact:EBI-775247|ensembl:ENSMUSP00000020420 psi-mi:ift27_mouse(display_long)|uniprotkb:Putative GTP-binding protein RAY-like(gene name synonym)|uniprotkb:Rab-like protein 4(gene name synonym)|uniprotkb:Rabl4(gene name synonym)|uniprotkb:Rayl(gene name synonym)|uniprotkb:Ift27(gene name)|psi-mi:Ift27(display_short) psi-mi:ap3d1_mouse(display_long)|uniprotkb:AP-3 complex subunit delta(gene name synonym)|uniprotkb:Delta-adaptin(gene name synonym)|uniprotkb:Ap3d1(gene name)|psi-mi:Ap3d1(display_short)|uniprotkb:Ap3d(gene name synonym)|uniprotkb:Adaptor-related protein complex 3 subunit delta-1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571153|imex:IM-24977-50 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080207.1|ensembl:ENSMUSG00000016637(gene)|ensembl:ENSMUST00000016781(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001822"(kidney development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007224"(smoothened signaling pathway)|go:"GO:0007283"(spermatogenesis)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0036126"(sperm flagellum)|go:"GO:0042073"(intraciliary transport)|go:"GO:0060122"(inner ear receptor cell stereocilium organization)|go:"GO:0090102"(cochlea development)|go:"GO:0097225"(sperm midpiece)|go:"GO:0097228"(sperm principal piece)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67042(identity) refseq:NP_031486.1|dip:DIP-32163N|ensembl:ENSMUSG00000020198(gene)|ensembl:ENSMUST00000020420(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006829"(zinc ion transport)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006896"(Golgi to vacuole transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0010008"(endosome membrane)|go:"GO:0016182"(synaptic vesicle budding from endosome)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030123"(AP-3 adaptor complex)|go:"GO:0030424"(axon)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0043195"(terminal bouton)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048007"(antigen processing and presentation, exogenous lipid antigen via MHC class Ib)|go:"GO:0048490"(anterograde synaptic vesicle transport)|go:"GO:0048499"(synaptic vesicle membrane organization)|go:"GO:0051138"(positive regulation of NK T cell differentiation)|go:"GO:0061088"(regulation of sequestering of zinc ion)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0098793"(presynapse)|go:"GO:0098794"(postsynapse)|go:"GO:0098830"(presynaptic endosome)|go:"GO:0098943"(neurotransmitter receptor transport, postsynaptic endosome to lysosome)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099003"(vesicle-mediated transport in synapse)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR002553(Clathrin/coatomer adaptor, adaptin-like, N-terminal)|interpro:IPR010474(Bovine leukaemia virus receptor)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR017105(Adaptor protein complex AP-3, delta subunit)|mint:O54774|entrezgene/locuslink:11776(identity) - - author-confidence:1.2955647702059372 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W40iL1kYv1vZPasVPC6luPR4FNo10090 rogid:q83u6ORB4zYNuQihE4PI1rhvSkY10090 intact-crc:84FCDAE756F2D85C|rigid:S+ISHsOlpAx/6RjnYYAMbVI8my0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D0P8 uniprotkb:Q8CAV0 intact:EBI-11571155|ensembl:ENSMUSP00000016781 intact:EBI-11571147|uniprotkb:Q3UW80|uniprotkb:Q6PG17|ensembl:ENSMUSP00000045647 psi-mi:ift27_mouse(display_long)|uniprotkb:Putative GTP-binding protein RAY-like(gene name synonym)|uniprotkb:Rab-like protein 4(gene name synonym)|uniprotkb:Rabl4(gene name synonym)|uniprotkb:Rayl(gene name synonym)|uniprotkb:Ift27(gene name)|psi-mi:Ift27(display_short) psi-mi:ybey_mouse(display_long)|uniprotkb:Ybey(gene name)|psi-mi:Ybey(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571153|imex:IM-24977-50 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080207.1|ensembl:ENSMUSG00000016637(gene)|ensembl:ENSMUST00000016781(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001822"(kidney development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007224"(smoothened signaling pathway)|go:"GO:0007283"(spermatogenesis)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0036126"(sperm flagellum)|go:"GO:0042073"(intraciliary transport)|go:"GO:0060122"(inner ear receptor cell stereocilium organization)|go:"GO:0090102"(cochlea development)|go:"GO:0097225"(sperm midpiece)|go:"GO:0097228"(sperm principal piece)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67042(identity) refseq:NP_766138.3|ensembl:ENSMUSG00000033126(gene)|ensembl:ENSMUST00000049185(transcript)|go:"GO:0004222"(metalloendopeptidase activity)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0046872"(metal ion binding)|interpro:IPR002036(Protein of unknown function UPF0054)|interpro:IPR020549|interpro:IPR023091|entrezgene/locuslink:216119(identity) - - author-confidence:1.0561940955233577 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W40iL1kYv1vZPasVPC6luPR4FNo10090 rogid:65s/hOt4/wi+omepX803fkJqm7410090 intact-crc:84FCDAE756F2D85C|rigid:S+ISHsOlpAx/6RjnYYAMbVI8my0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D0P8 uniprotkb:Q9JIS8 intact:EBI-11571155|ensembl:ENSMUSP00000016781 intact:EBI-11566383|uniprotkb:O55069|uniprotkb:Q9ET57|ensembl:ENSMUSP00000112130 psi-mi:ift27_mouse(display_long)|uniprotkb:Putative GTP-binding protein RAY-like(gene name synonym)|uniprotkb:Rab-like protein 4(gene name synonym)|uniprotkb:Rabl4(gene name synonym)|uniprotkb:Rayl(gene name synonym)|uniprotkb:Ift27(gene name)|psi-mi:Ift27(display_short) psi-mi:s12a4_mouse(display_long)|uniprotkb:Electroneutral potassium-chloride cotransporter 1(gene name synonym)|uniprotkb:Erythroid K-Cl cotransporter 1(gene name synonym)|uniprotkb:Kcc1(gene name synonym)|uniprotkb:Slc12a4(gene name)|psi-mi:Slc12a4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571153|imex:IM-24977-50 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080207.1|ensembl:ENSMUSG00000016637(gene)|ensembl:ENSMUST00000016781(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001822"(kidney development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007224"(smoothened signaling pathway)|go:"GO:0007283"(spermatogenesis)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0036126"(sperm flagellum)|go:"GO:0042073"(intraciliary transport)|go:"GO:0060122"(inner ear receptor cell stereocilium organization)|go:"GO:0090102"(cochlea development)|go:"GO:0097225"(sperm midpiece)|go:"GO:0097228"(sperm principal piece)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67042(identity) refseq:NP_033221.1|ensembl:ENSMUST00000116429(transcript)|go:"GO:0006884"(cell volume homeostasis)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0015379"("potassium:chloride symporter activity")|go:"GO:0016021"(integral component of membrane)|go:"GO:0019901"(protein kinase binding)|go:"GO:0045202"(synapse)|go:"GO:0055064"(chloride ion homeostasis)|go:"GO:0055075"(potassium ion homeostasis)|go:"GO:1902476"(chloride transmembrane transport)|go:"GO:1990573"(potassium ion import across plasma membrane)|interpro:IPR000076(K-Cl co-transporter)|interpro:IPR000622(K-Cl Co-transporter, type 1)|interpro:IPR004841(Amino acid permease-associated region)|interpro:IPR004842(Na-K-Cl cotransporter superfamily)|interpro:IPR018491|reactome:R-MMU-426117|ensembl:ENSMUSG00000017765(gene)|entrezgene/locuslink:20498(identity) - - author-confidence:2.176291771610745 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:W40iL1kYv1vZPasVPC6luPR4FNo10090 rogid:QbxF/FzOycoNIBPRshFAo1J84Us10090 intact-crc:84FCDAE756F2D85C|rigid:S+ISHsOlpAx/6RjnYYAMbVI8my0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D4I9 uniprotkb:Q9D6Z1 intact:EBI-11571268|ensembl:ENSMUSP00000085625|ensembl:ENSMUSP00000110828 intact:EBI-527254|uniprotkb:Q3UD45|uniprotkb:Q8BVL1|uniprotkb:Q8VDT2|uniprotkb:Q99LT8|uniprotkb:Q9CT15|ensembl:ENSMUSP00000099487 psi-mi:q9d4i9_mouse(display_long)|uniprotkb:Rab23(gene name)|psi-mi:Rab23(display_short) psi-mi:nop56_mouse(display_long)|uniprotkb:Nop56(gene name)|psi-mi:Nop56(display_short)|uniprotkb:Nol5a(gene name synonym)|uniprotkb:Nucleolar protein 5A(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571272|imex:IM-24977-52 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001153201.1|refseq:NP_033025.2|refseq:XP_006495864.1|refseq:XP_006495865.1|ensembl:ENSMUSG00000004768(gene)|ensembl:ENSMUST00000088287(transcript)|ensembl:ENSMUST00000115174(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005776"(autophagosome)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006968"(cellular defense response)|go:"GO:0030054"(cell junction)|go:"GO:0042308"(negative regulation of protein import into nucleus)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0046039"(GTP metabolic process)|go:"GO:0060271"(cilium assembly)|go:"GO:0097094"(craniofacial suture morphogenesis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR034114|entrezgene/locuslink:19335(identity) refseq:NP_077155.2|ensembl:ENSMUSG00000027405(gene)|ensembl:ENSMUST00000103198(transcript)|go:"GO:0001650"(fibrillar center)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0005737"(cytoplasm)|go:"GO:0030515"(snoRNA binding)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0070761"(pre-snoRNP complex)|go:"GO:1990226"(histone methyltransferase binding)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|mint:Q9D6Z1|reactome:R-MMU-6791226|entrezgene/locuslink:67134(identity) - - author-confidence:5.51052356310657 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:17l9VF8f1H4YJRgbx9gO1sRbXuE10090 rogid:5darNL7hBt/XPnvcm0hiVxx7WDY10090 intact-crc:09B4D69DD16EA759|rigid:ecD/3x3yHUbm6HgxfZK8SSKvKL0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D4I9 uniprotkb:P29341 intact:EBI-11571268|ensembl:ENSMUSP00000085625|ensembl:ENSMUSP00000110828 intact:EBI-773902|uniprotkb:Q99L36|ensembl:ENSMUSP00000001809 psi-mi:q9d4i9_mouse(display_long)|uniprotkb:Rab23(gene name)|psi-mi:Rab23(display_short) psi-mi:pabp1_mouse(display_long)|uniprotkb:Pabpc1(gene name)|psi-mi:Pabpc1(display_short)|uniprotkb:Pabp1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571272|imex:IM-24977-52 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001153201.1|refseq:NP_033025.2|refseq:XP_006495864.1|refseq:XP_006495865.1|ensembl:ENSMUSG00000004768(gene)|ensembl:ENSMUST00000088287(transcript)|ensembl:ENSMUST00000115174(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005776"(autophagosome)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006968"(cellular defense response)|go:"GO:0030054"(cell junction)|go:"GO:0042308"(negative regulation of protein import into nucleus)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0046039"(GTP metabolic process)|go:"GO:0060271"(cilium assembly)|go:"GO:0097094"(craniofacial suture morphogenesis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR034114|entrezgene/locuslink:19335(identity) dip:DIP-32127N|refseq:NP_032800.2|refseq:XP_011243641.1|ensembl:ENSMUSG00000022283(gene)|ensembl:ENSMUST00000001809(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008143"("poly(A) binding")|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0008380"(RNA splicing)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0030027"(lamellipodium)|go:"GO:0030425"(dendrite)|go:"GO:0031047"(gene silencing by RNA)|go:"GO:0031252"(cell leading edge)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0045070"(positive regulation of viral genome replication)|go:"GO:0045202"(synapse)|go:"GO:0060213"("positive regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1900153"(positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:1990124"(messenger ribonucleoprotein complex)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000623"(negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002004(Polyadenylate-binding protein/Hyperplastic disc protein)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR006515(Polyadenylate binding protein, human types 1, 2, 3, 4)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|interpro:IPR036053|mint:P29341|reactome:R-MMU-156827|reactome:R-MMU-429947|reactome:R-MMU-450408|reactome:R-MMU-72649|reactome:R-MMU-975956|reactome:R-MMU-975957|entrezgene/locuslink:18458(identity) - - author-confidence:1.1961393669261486 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:17l9VF8f1H4YJRgbx9gO1sRbXuE10090 rogid:jvlQW6kphF2tkZwK72DtAXDPHvs10090 intact-crc:09B4D69DD16EA759|rigid:ecD/3x3yHUbm6HgxfZK8SSKvKL0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D4I9 uniprotkb:A2A935 intact:EBI-11571268|ensembl:ENSMUSP00000085625|ensembl:ENSMUSP00000110828 intact:EBI-6268248|ensembl:ENSMUSP00000030902|uniprotkb:Q69ZD6|uniprotkb:Q6PB79|uniprotkb:Q7TPF4 psi-mi:q9d4i9_mouse(display_long)|uniprotkb:Rab23(gene name)|psi-mi:Rab23(display_short) psi-mi:prd16_mouse(display_long)|uniprotkb:PR domain zinc finger protein 16(gene name synonym)|uniprotkb:Prdm16(gene name)|psi-mi:Prdm16(display_short)|uniprotkb:Kiaa1675(gene name synonym)|uniprotkb:Mel1(gene name synonym)|uniprotkb:PR domain-containing protein 16(gene name synonym)|uniprotkb:Transcription factor MEL1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571272|imex:IM-24977-52 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001153201.1|refseq:NP_033025.2|refseq:XP_006495864.1|refseq:XP_006495865.1|ensembl:ENSMUSG00000004768(gene)|ensembl:ENSMUST00000088287(transcript)|ensembl:ENSMUST00000115174(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005776"(autophagosome)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006968"(cellular defense response)|go:"GO:0030054"(cell junction)|go:"GO:0042308"(negative regulation of protein import into nucleus)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0046039"(GTP metabolic process)|go:"GO:0060271"(cilium assembly)|go:"GO:0097094"(craniofacial suture morphogenesis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR034114|entrezgene/locuslink:19335(identity) ensembl:ENSMUSG00000039410(gene)|ensembl:ENSMUST00000030902(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016235"(aggresome)|go:"GO:0017053"(transcription repressor complex)|go:"GO:0019827"(stem cell population maintenance)|go:"GO:0022008"(neurogenesis)|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030853"(negative regulation of granulocyte differentiation)|go:"GO:0035019"(somatic stem cell population maintenance)|go:"GO:0043457"(regulation of cellular respiration)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0043586"(tongue development)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046332"(SMAD binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0046974"("histone methyltransferase activity (H3-K9 specific)")|go:"GO:0048468"(cell development)|go:"GO:0050872"(white fat cell differentiation)|go:"GO:0050873"(brown fat cell differentiation)|go:"GO:0060021"(roof of mouth development)|go:"GO:0070828"(heterochromatin organization)|go:"GO:0090336"(positive regulation of brown fat cell differentiation)|go:"GO:0120162"(positive regulation of cold-induced thermogenesis)|go:"GO:0140297"(DNA-binding transcription factor binding)|interpro:IPR001214(SET)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|interpro:IPR044410|mint:A2A935|reactome:R-MMU-3214841|refseq:NP_001277955.1|refseq:NP_001277958.1|refseq:XP_006539236.1|refseq:NP_081780.3|dip:DIP-60593N|entrezgene/locuslink:70673(identity) - - author-confidence:1.0444129884920004 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:17l9VF8f1H4YJRgbx9gO1sRbXuE10090 rogid:IIoKgZ/wtPhFX+h3JHXbeH2HEpg10090 intact-crc:09B4D69DD16EA759|rigid:ecD/3x3yHUbm6HgxfZK8SSKvKL0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D4I9 uniprotkb:Q91YL7 intact:EBI-11571268|ensembl:ENSMUSP00000085625|ensembl:ENSMUSP00000110828 intact:EBI-11571274|uniprotkb:Q8CBQ1|ensembl:ENSMUSP00000031040 psi-mi:q9d4i9_mouse(display_long)|uniprotkb:Rab23(gene name)|psi-mi:Rab23(display_short) psi-mi:pg2ip_mouse(display_long)|uniprotkb:Cell wall biogenesis protein 43 C-terminal homolog(gene name synonym)|uniprotkb:Pgap2ip(gene name synonym)|uniprotkb:Cwh43(gene name)|psi-mi:Cwh43(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571272|imex:IM-24977-52 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001153201.1|refseq:NP_033025.2|refseq:XP_006495864.1|refseq:XP_006495865.1|ensembl:ENSMUSG00000004768(gene)|ensembl:ENSMUST00000088287(transcript)|ensembl:ENSMUST00000115174(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005776"(autophagosome)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006968"(cellular defense response)|go:"GO:0030054"(cell junction)|go:"GO:0042308"(negative regulation of protein import into nucleus)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0046039"(GTP metabolic process)|go:"GO:0060271"(cilium assembly)|go:"GO:0097094"(craniofacial suture morphogenesis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR034114|entrezgene/locuslink:19335(identity) refseq:NP_851840.1|ensembl:ENSMUSG00000029154(gene)|ensembl:ENSMUST00000031040(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006506"(GPI anchor biosynthetic process)|go:"GO:0016021"(integral component of membrane)|interpro:IPR036691|interpro:IPR027317|entrezgene/locuslink:231293(identity) - - author-confidence:3.303172509322247 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:17l9VF8f1H4YJRgbx9gO1sRbXuE10090 rogid:wHiI8klCkzquSJwApOfsNI0WiHc10090 intact-crc:09B4D69DD16EA759|rigid:ecD/3x3yHUbm6HgxfZK8SSKvKL0 false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D1G1 uniprotkb:Q60809 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-2104739|ensembl:ENSMUSP00000034012|ensembl:ENSMUSP00000117304|ensembl:ENSMUSP00000122933 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:cnot7_mouse(display_long)|uniprotkb:CCR4-associated factor 1(gene name synonym)|uniprotkb:Cnot7(gene name)|psi-mi:Cnot7(display_short)|uniprotkb:Caf1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571200|imex:IM-24977-51 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:XP_011240485.1|refseq:NP_001258471.1|refseq:NP_035265.1|dip:DIP-46843N|ensembl:ENSMUSG00000031601(gene)|ensembl:ENSMUST00000034012(transcript)|ensembl:ENSMUST00000132032(transcript)|ensembl:ENSMUST00000149992(transcript)|go:"GO:0000175"(3'-5'-exoribonuclease activity)|go:"GO:0000289"("nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0003723"(RNA binding)|go:"GO:0004532"(exoribonuclease activity)|go:"GO:0004535"("poly(A)-specific ribonuclease activity")|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0016604"(nuclear body)|go:"GO:0016607"(nuclear speck)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0031047"(gene silencing by RNA)|go:"GO:0033962"(P-body assembly)|go:"GO:0042509"(regulation of tyrosine phosphorylation of STAT protein)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0045070"(positive regulation of viral genome replication)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0051607"(defense response to virus)|go:"GO:0060213"("positive regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0060339"(negative regulation of type I interferon-mediated signaling pathway)|go:"GO:0061014"(positive regulation of mRNA catabolic process)|go:"GO:1900153"(positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|interpro:IPR006941(Ribonuclease CAF1)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR036397|interpro:IPR039636|interpro:IPR039637|mint:Q60809|reactome:R-MMU-429947|reactome:R-MMU-6804115|entrezgene/locuslink:18983(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:2.032954969395897 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:99jca+XuNmn13TTgOG/bfAEbt4E10090 intact-crc:D536775EF0D17CAF|rigid:edVHxCzgfuPok1yKTNDus++rQJc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D1G1 uniprotkb:Q7SIG6 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-8069706|uniprotkb:Q501K1|uniprotkb:Q66JN2|intact:UNK-5493872|ensembl:ENSMUSP00000099098 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:asap2_mouse(display_long)|uniprotkb:Asap2(gene name)|psi-mi:Asap2(display_short)|uniprotkb:Gm592(gene name synonym)|uniprotkb:Paxillin-associated protein with ARF GAP activity 3(gene name synonym)|uniprotkb:Pyk2 C-terminus-associated protein(gene name synonym)|uniprotkb:Ddef2(gene name synonym)|uniprotkb:Development and differentiation-enhancing factor 2(gene name synonym)|uniprotkb:Gm1523(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571200|imex:IM-24977-51 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_001128664.1|refseq:NP_001091637.1|refseq:NP_001004364.2|ensembl:ENSMUSG00000052632(gene)|ensembl:ENSMUST00000101562(transcript)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0046872"(metal ion binding)|interpro:IPR001164(Arf GTPase activating protein)|interpro:IPR001452(Src homology-3)|interpro:IPR001849(Pleckstrin-like)|interpro:IPR002110(Ankyrin)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR020683|interpro:IPR027267|interpro:IPR035677|interpro:IPR036028|interpro:IPR036770|interpro:IPR037278|interpro:IPR037844|interpro:IPR038508|interpro:IPR043593|mint:Q7SIG6|rcsb pdb:1DCQ|entrezgene/locuslink:211914(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic comment:mint|function:Activates the small GTPases ARF1, ARF5 and ARF6. Regulates the formation of post-Golgi vesicles and modulates constitutive secretion. Modulates phagocytosis mediated by Fc gamma receptor and ARF6. Modulates PXN recruitment to focal contacts and cell migration|author-confidence:11.489256879898752 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:o804o1uwQJ8FAb3qdEE2r7ZfOIg10090 intact-crc:D536775EF0D17CAF|rigid:edVHxCzgfuPok1yKTNDus++rQJc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D1G1 uniprotkb:Q8QZV4 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-8321862|intact:MINT-4118093|uniprotkb:Q9JJG4|ensembl:ENSMUSP00000016125 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:st32c_mouse(display_long)|uniprotkb:Stk32c(gene name)|psi-mi:Stk32c(display_short)|uniprotkb:Pkek(gene name synonym)|uniprotkb:MNCb-1563(orf name) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571200|imex:IM-24977-51 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_001156012.1|refseq:NP_067277.2|ensembl:ENSMUSG00000015981(gene)|ensembl:ENSMUST00000016125(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0046872"(metal ion binding)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|mint:Q8QZV4|entrezgene/locuslink:57740(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic comment:mint|author-confidence:4.166584853423393 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:l0YgQuYKu1amfT3hAzxej/TT9E410090 intact-crc:D536775EF0D17CAF|rigid:edVHxCzgfuPok1yKTNDus++rQJc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D1G1 uniprotkb:Q9DD03 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571200|imex:IM-24977-51 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint|author-confidence:2.0247438947982843 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 intact-crc:D536775EF0D17CAF|rigid:edVHxCzgfuPok1yKTNDus++rQJc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D1G1 uniprotkb:P56371 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-8595346|ensembl:ENSMUSP00000113401|ensembl:ENSMUSP00000113886|uniprotkb:Q3TSQ6|intact:MINT-255793 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:rab4a_mouse(display_long)|uniprotkb:Rab4a(gene name)|psi-mi:Rab4a(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571200|imex:IM-24977-51 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) ensembl:ENSMUSG00000019478(gene)|ensembl:ENSMUST00000117702(transcript)|ensembl:ENSMUST00000118535(transcript)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0035255"(ionotropic glutamate receptor binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051117"(ATPase binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|go:"GO:0005829"(cytosol)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-1660499|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8875656|interpro:IPR005225(Small GTP-binding protein)|refseq:NP_033029.2|entrezgene/locuslink:19341(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic comment:mint|function:Protein transport. Probably involved in vesicular traffic|author-confidence:14.036118018132195 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:Zbxmk1iz9rsuGwyA/uH6anpupLc10090 intact-crc:D536775EF0D17CAF|rigid:edVHxCzgfuPok1yKTNDus++rQJc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D1G1 uniprotkb:Q8BHC1 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571200|imex:IM-24977-51 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:1.492273557305268 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:D536775EF0D17CAF|rigid:edVHxCzgfuPok1yKTNDus++rQJc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D1G1 uniprotkb:P62823 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571200|imex:IM-24977-51 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:1.4913810491968318 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 intact-crc:D536775EF0D17CAF|rigid:edVHxCzgfuPok1yKTNDus++rQJc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D1G1 uniprotkb:Q6PHN9 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-1373353|ensembl:ENSMUSP00000031492 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571200|imex:IM-24977-51 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:11.675969576183599 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 intact-crc:D536775EF0D17CAF|rigid:edVHxCzgfuPok1yKTNDus++rQJc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D1G1 uniprotkb:Q91V14 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-771283|uniprotkb:Q9Z0M7|uniprotkb:A2A5L0|uniprotkb:Q3UHQ2|uniprotkb:Q7TQC9|uniprotkb:Q80TI5|ensembl:ENSMUSP00000144623 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:s12a5_mouse(display_long)|uniprotkb:Kiaa1176(gene name synonym)|uniprotkb:Electroneutral potassium-chloride cotransporter 2(gene name synonym)|uniprotkb:K-Cl cotransporter 2(gene name synonym)|uniprotkb:Neuronal K-Cl cotransporter(gene name synonym)|uniprotkb:Slc12a5(gene name)|psi-mi:Slc12a5(display_short)|uniprotkb:Kcc2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571200|imex:IM-24977-51 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_065066.2|refseq:XP_006500006.2|ensembl:ENSMUSG00000017740(gene)|ensembl:ENSMUST00000202623(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006811"(ion transport)|go:"GO:0006813"(potassium ion transport)|go:"GO:0006821"(chloride transport)|go:"GO:0006873"(cellular ion homeostasis)|go:"GO:0006884"(cell volume homeostasis)|go:"GO:0006971"(hypotonic response)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0007612"(learning)|go:"GO:0008519"(ammonium transmembrane transporter activity)|go:"GO:0015108"(chloride transmembrane transporter activity)|go:"GO:0015379"("potassium:chloride symporter activity")|go:"GO:0015696"|go:"GO:0016021"(integral component of membrane)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030644"(cellular chloride ion homeostasis)|go:"GO:0032590"(dendrite membrane)|go:"GO:0035264"(multicellular organism growth)|go:"GO:0040040"(thermosensory behavior)|go:"GO:0042493"|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043204"(perikaryon)|go:"GO:0045202"(synapse)|go:"GO:0051452"(intracellular pH reduction)|go:"GO:0055064"(chloride ion homeostasis)|go:"GO:0055075"(potassium ion homeostasis)|go:"GO:0060996"(dendritic spine development)|go:"GO:0071944"(cell periphery)|go:"GO:1902476"(chloride transmembrane transport)|go:"GO:1990573"(potassium ion import across plasma membrane)|interpro:IPR000076(K-Cl co-transporter)|interpro:IPR004841(Amino acid permease-associated region)|interpro:IPR004842(Na-K-Cl cotransporter superfamily)|interpro:IPR018491|interpro:IPR030358|mint:Q91V14|reactome:R-MMU-426117|rcsb pdb:7D14|entrezgene/locuslink:57138(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:1.1042110317572233 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:IPFuWDprSLeYLv46uF6WHNQnd7810090 intact-crc:D536775EF0D17CAF|rigid:edVHxCzgfuPok1yKTNDus++rQJc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D1G1 uniprotkb:P61027 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571200|imex:IM-24977-51 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:1.305382359398735 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 intact-crc:D536775EF0D17CAF|rigid:edVHxCzgfuPok1yKTNDus++rQJc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D1G1 uniprotkb:P58389 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-11567597|ensembl:ENSMUSP00000046837 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:ptpa_mouse(display_long)|uniprotkb:Ptpa(gene name)|psi-mi:Ptpa(display_short)|uniprotkb:PP2A, subunit B', PR53 isoform(gene name synonym)|uniprotkb:Phosphotyrosyl phosphatase activator(gene name synonym)|uniprotkb:Ppp2r4(gene name synonym)|uniprotkb:Serine/threonine-protein phosphatase 2A regulatory subunit 4(gene name synonym)|uniprotkb:Serine/threonine-protein phosphatase 2A regulatory subunit B'(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571200|imex:IM-24977-51 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_620087.3|ensembl:ENSMUSG00000039515(gene)|ensembl:ENSMUST00000042055(transcript)|go:"GO:0000159"(protein phosphatase type 2A complex)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0007052"(mitotic spindle organization)|go:"GO:0008160"(protein tyrosine phosphatase activator activity)|go:"GO:0019888"(protein phosphatase regulator activity)|go:"GO:0032515"(negative regulation of phosphoprotein phosphatase activity)|go:"GO:0032516"(positive regulation of phosphoprotein phosphatase activity)|go:"GO:0034704"(calcium channel complex)|go:"GO:0035307"(positive regulation of protein dephosphorylation)|go:"GO:0035308"(negative regulation of protein dephosphorylation)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043666"(regulation of phosphoprotein phosphatase activity)|go:"GO:0051721"(protein phosphatase 2A binding)|interpro:IPR004327(Phosphotyrosyl phosphatase activator, PTPA)|interpro:IPR037218|interpro:IPR043170|entrezgene/locuslink:110854(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:15.99428080804114 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:d7IaNLYe476wB4fY8kgb/gF6AsU10090 intact-crc:D536775EF0D17CAF|rigid:edVHxCzgfuPok1yKTNDus++rQJc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9D1G1 uniprotkb:Q9Z179 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-644352|uniprotkb:Q3UED9|uniprotkb:Q3UMD9|ensembl:ENSMUSP00000022945 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:shcbp_mouse(display_long)|uniprotkb:Protein expressed in activated lymphocytes(gene name synonym)|uniprotkb:SHC-binding protein(gene name synonym)|uniprotkb:Shcbp1(gene name)|psi-mi:Shcbp1(display_short)|uniprotkb:Pal(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571200|imex:IM-24977-51 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_035499.1|ensembl:ENSMUSG00000022322(gene)|ensembl:ENSMUST00000022945(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005819"(spindle)|go:"GO:0008543"(fibroblast growth factor receptor signaling pathway)|go:"GO:0030496"(midbody)|go:"GO:0042169"(SH2 domain binding)|go:"GO:2000177"(regulation of neural precursor cell proliferation)|interpro:IPR006626(Parallel beta-helix repeat)|interpro:IPR011050(Pectin lyase fold/virulence factor)|interpro:IPR012334(Pectin lyase fold)|interpro:IPR039448|entrezgene/locuslink:20419(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic author-confidence:3.0934331038397485 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:MgcPGnEzLfUPCtS+m+6NJ4Yyr2k10090 intact-crc:D536775EF0D17CAF|rigid:edVHxCzgfuPok1yKTNDus++rQJc false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:Q8BFY9 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-3870049|uniprotkb:Q8C0S3|uniprotkb:Q8K2E7|ensembl:ENSMUSP00000105028 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:tnpo1_mouse(display_long)|uniprotkb:Tnpo1(gene name)|psi-mi:Tnpo1(display_short)|uniprotkb:Kpnb2(gene name synonym)|uniprotkb:Importin beta-2(gene name synonym)|uniprotkb:Karyopherin beta-2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_001041732.1|refseq:NP_848831.2|refseq:XP_006517699.1|refseq:XP_006517700.1|ensembl:ENSMUSG00000009470(gene)|ensembl:ENSMUST00000109401(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0061608"(nuclear import signal receptor activity)|interpro:IPR001494(Importin-beta, N-terminal)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040122|mint:Q8BFY9|reactome:R-MMU-450513|reactome:R-MMU-5620924|entrezgene/locuslink:238799(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint author-confidence:4.817401766095045 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:khDQjW/eY+ga9LRUpgOrxbKi6lg10090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:B2RXR6 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-11566298|uniprotkb:B2RXN6|uniprotkb:B7ZWK8|ensembl:ENSMUSP00000137616 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:anr44_mouse(display_long)|uniprotkb:Ankyrin repeat domain-containing protein 44(gene name synonym)|uniprotkb:Ankrd44(gene name)|psi-mi:Ankrd44(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_001074902.2|ensembl:ENSMUSG00000052331(gene)|ensembl:ENSMUST00000179030(transcript)|interpro:IPR002110(Ankyrin)|interpro:IPR020683|interpro:IPR036770|entrezgene/locuslink:329154(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint author-confidence:1.5058396805534977 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:u2gh8Mr3OLcC72DfwHC0bMCFj3c10090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:Q6PHN9 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-1373353|ensembl:ENSMUSP00000031492 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint author-confidence:4.3873913594505005 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:Q6ZPL9 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-6260901|ensembl:ENSMUSP00000070279|uniprotkb:Q3U460|uniprotkb:Q149H5|uniprotkb:Q8BZR1 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:ddx55_mouse(display_long)|uniprotkb:DEAD box protein 55(gene name synonym)|uniprotkb:Kiaa1595(gene name synonym)|uniprotkb:Ddx55(gene name)|psi-mi:Ddx55(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) ensembl:ENSMUSG00000029389(gene)|ensembl:ENSMUST00000071057(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|refseq:NP_080685.2|entrezgene/locuslink:67848(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint author-confidence:1.032453379838956 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:eQ/R6J7rkH+BUxnW6eWNK85H/V010090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:A2A9M5 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-11566645|ensembl:ENSMUSP00000030286 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:a2a9m5_mouse(display_long)|uniprotkb:Dock7(gene name)|psi-mi:Dock7(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_001277565.1|ensembl:ENSMUSG00000028556(gene)|ensembl:ENSMUST00000030286(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|interpro:IPR035892|interpro:IPR037808|interpro:IPR043161|interpro:IPR043162|go:"GO:0007264"(small GTPase mediated signal transduction)|interpro:IPR010703(Dedicator of cytokinesis)|interpro:IPR021816|interpro:IPR026791|interpro:IPR027007|interpro:IPR027357|entrezgene/locuslink:67299(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint author-confidence:4.455400477313336 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:CgSJgOizdJ+BnXU1KgXekQUqrpw10090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:Q9JKY0 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-529858|ensembl:ENSMUSP00000084466 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:cnot9_mouse(display_long)|uniprotkb:Cnot9(gene name)|psi-mi:Cnot9(display_short)|uniprotkb:Cell differentiation protein RQCD1 homolog(gene name synonym)|uniprotkb:EPO-induced protein FL10(gene name synonym)|uniprotkb:Rcd1(gene name synonym)|uniprotkb:Rqcd1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_067358.1|dip:DIP-34266N|ensembl:ENSMUSG00000026174(gene)|ensembl:ENSMUST00000087215(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005154"(epidermal growth factor receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019221"(cytokine-mediated signaling pathway)|go:"GO:0019900"(kinase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0031047"(gene silencing by RNA)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0045742"(positive regulation of epidermal growth factor receptor signaling pathway)|interpro:IPR007216(Cell differentiation, Rcd1-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|reactome:R-MMU-429947|reactome:R-MMU-6804115|entrezgene/locuslink:58184(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint author-confidence:1.5633172027367868 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:dFdbI7Ohvu0vtwY45V/pyKNTT/810090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:Q9Z179 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-644352|uniprotkb:Q3UED9|uniprotkb:Q3UMD9|ensembl:ENSMUSP00000022945 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:shcbp_mouse(display_long)|uniprotkb:Protein expressed in activated lymphocytes(gene name synonym)|uniprotkb:SHC-binding protein(gene name synonym)|uniprotkb:Shcbp1(gene name)|psi-mi:Shcbp1(display_short)|uniprotkb:Pal(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_035499.1|ensembl:ENSMUSG00000022322(gene)|ensembl:ENSMUST00000022945(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005819"(spindle)|go:"GO:0008543"(fibroblast growth factor receptor signaling pathway)|go:"GO:0030496"(midbody)|go:"GO:0042169"(SH2 domain binding)|go:"GO:2000177"(regulation of neural precursor cell proliferation)|interpro:IPR006626(Parallel beta-helix repeat)|interpro:IPR011050(Pectin lyase fold/virulence factor)|interpro:IPR012334(Pectin lyase fold)|interpro:IPR039448|entrezgene/locuslink:20419(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint author-confidence:6.437125481284998 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:MgcPGnEzLfUPCtS+m+6NJ4Yyr2k10090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:P97351 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-773982|ensembl:ENSMUSP00000029722 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:rs3a_mouse(display_long)|uniprotkb:Rps3a(gene name)|psi-mi:Rps3a(display_short)|uniprotkb:Protein TU-11(gene name synonym)|uniprotkb:Rps3a1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_058655.3|ensembl:ENSMUSG00000028081(gene)|ensembl:ENSMUST00000029722(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0015935"(small ribosomal subunit)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0030154"(cell differentiation)|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0045202"(synapse)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0048146"(positive regulation of fibroblast proliferation)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR001593(Ribosomal protein S3Ae)|interpro:IPR018281|interpro:IPR027500|reactome:R-MMU-156827|reactome:R-MMU-1799339|reactome:R-MMU-6791226|reactome:R-MMU-72649|reactome:R-MMU-72689|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-975956|reactome:R-MMU-975957|entrezgene/locuslink:20091(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint author-confidence:5.71115938588302 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:pi623FvaPjjNAiN44zPHjtep4gs10090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:Q6ZQ08 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-682479|intact:EBI-2104684|uniprotkb:B2RY28|uniprotkb:Q3UPB7|uniprotkb:Q8BSB4|uniprotkb:Q8BXB2|uniprotkb:Q8C0H2|uniprotkb:Q8K3D8 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:cnot1_mouse(display_long)|uniprotkb:Cnot1(gene name)|psi-mi:Cnot1(display_short)|uniprotkb:Kiaa1007(gene name synonym)|uniprotkb:CCR4-associated factor 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_835179.1|refseq:XP_006530937.1|dip:DIP-46845N|mint:Q6ZQ08|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000288"(nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:0000932"(P-body)|go:"GO:0001829"(trophectodermal cell differentiation)|go:"GO:0004535"("poly(A)-specific ribonuclease activity")|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0010606"(positive regulation of cytoplasmic mRNA processing body assembly)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0030331"(estrogen receptor binding)|go:"GO:0033147"(negative regulation of intracellular estrogen receptor signaling pathway)|go:"GO:0035195"(gene silencing by miRNA)|go:"GO:0042974"(retinoic acid receptor binding)|go:"GO:0048387"(negative regulation of retinoic acid receptor signaling pathway)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0060213"("positive regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0061014"(positive regulation of mRNA catabolic process)|go:"GO:0070016"(armadillo repeat domain binding)|go:"GO:1900153"(positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:2000036"(regulation of stem cell population maintenance)|interpro:IPR007196(CCR4-Not complex component, Not1)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR024557|interpro:IPR032191|interpro:IPR032193|interpro:IPR032194|interpro:IPR038535|interpro:IPR040398|reactome:R-MMU-429947|reactome:R-MMU-6804115|entrezgene/locuslink:234594(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint comment:AfCS Y2H protein 39306. Translated from nucleotide sequence.|author-confidence:1.7703790838939772 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:2Q4quoSuPlUbD4QkiAkc9Hr9avI10090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:P17710 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-773368|uniprotkb:E9PXQ3|uniprotkb:Q61659|uniprotkb:Q64476|uniprotkb:Q64479 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:hxk1_mouse(display_long)|uniprotkb:Hexokinase type I(gene name synonym)|uniprotkb:Hexokinase, tumor isozyme(gene name synonym)|uniprotkb:Hk1(gene name)|psi-mi:Hk1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) interpro:IPR001312(Hexokinase)|interpro:IPR022673|interpro:IPR019807|interpro:IPR022672|refseq:XP_006513305.1|refseq:XP_006513306.1|refseq:XP_006513307.1|refseq:XP_006513308.1|interpro:IPR043129|mint:P17710|go:"GO:0001678"(cellular glucose homeostasis)|go:"GO:0002720"(positive regulation of cytokine production involved in immune response)|go:"GO:0002931"(response to ischemia)|go:"GO:0004340"(glucokinase activity)|go:"GO:0004396"(hexokinase activity)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005536"(glucose binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005829"(cytosol)|go:"GO:0005901"(caveola)|go:"GO:0006002"(fructose 6-phosphate metabolic process)|go:"GO:0006013"(mannose metabolic process)|go:"GO:0006096"(glycolytic process)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006954"(inflammatory response)|go:"GO:0008865"(fructokinase activity)|go:"GO:0010359"(regulation of anion channel activity)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0018108"(peptidyl-tyrosine phosphorylation)|go:"GO:0019158"(mannokinase activity)|go:"GO:0032731"(positive regulation of interleukin-1 beta production)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0042834"(peptidoglycan binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045087"(innate immune response)|go:"GO:0045121"(membrane raft)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0046835"(carbohydrate phosphorylation)|go:"GO:0047931"(glucosamine kinase activity)|go:"GO:0051156"(glucose 6-phosphate metabolic process)|go:"GO:0072655"(establishment of protein localization to mitochondrion)|go:"GO:0072656"(maintenance of protein location in mitochondrion)|reactome:R-MMU-70171|entrezgene/locuslink:15275(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint author-confidence:3.8695581549358375 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:x4T9LnTLPxq69q+uvfTwLT8gCn410090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:Q6NVF9 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-644663|uniprotkb:Q8BX86|uniprotkb:Q8BXI8|ensembl:ENSMUSP00000135136|ensembl:ENSMUSP00000068408 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:cpsf6_mouse(display_long)|uniprotkb:Cpsf6(gene name)|psi-mi:Cpsf6(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_001013409.1|refseq:XP_006513921.1|interpro:IPR034772|interpro:IPR035979|go:"GO:0051290"(protein heterotetramerization)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|go:"GO:0110104"(mRNA alternative polyadenylation)|go:"GO:1990120"(messenger ribonucleoprotein complex assembly)|go:"GO:1990448"(exon-exon junction complex binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034769|ensembl:ENSMUSG00000055531(gene)|ensembl:ENSMUST00000069168(transcript)|ensembl:ENSMUST00000177145(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005726"(perichromatin fibrils)|go:"GO:0005737"(cytoplasm)|go:"GO:0005847"(mRNA cleavage and polyadenylation specificity factor complex)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006397"(mRNA processing)|go:"GO:0016607"(nuclear speck)|go:"GO:0035061"(interchromatin granule)|go:"GO:0042382"(paraspeckles)|go:"GO:0043023"(ribosomal large subunit binding)|go:"GO:0046833"(positive regulation of RNA export from nucleus)|go:"GO:0051262"(protein tetramerization)|dip:DIP-49394N|entrezgene/locuslink:432508(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint author-confidence:7.719124128242704 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:vkAL2tagRoSQgMPNzhp1xN5AM7o10090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:P62849 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-11567545|uniprotkb:P16632|uniprotkb:Q6PDB5|uniprotkb:Q642L0|ensembl:ENSMUSP00000152944 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:rs24_mouse(display_long)|uniprotkb:Rps24(gene name)|psi-mi:Rps24(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_035427.2|refseq:NP_997517.1|refseq:NP_997518.1|refseq:XP_006518797.1|interpro:IPR001976(Ribosomal protein S24e)|interpro:IPR012678(Ribosomal protein L23/L15e, core)|interpro:IPR018098|mint:P62849|reactome:R-MMU-156827|reactome:R-MMU-1799339|reactome:R-MMU-6791226|reactome:R-MMU-72649|reactome:R-MMU-72689|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-975956|reactome:R-MMU-975957|ensembl:ENSMUSG00000025290(gene)|ensembl:ENSMUST00000225023(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0006412"(translation)|go:"GO:0015935"(small ribosomal subunit)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0034101"(erythrocyte homeostasis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|entrezgene/locuslink:20088(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint author-confidence:6.151701388207112 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:M/qkRxabHx9PFaOM7EwKDOOwu7Q10090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:P62242 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-351820|uniprotkb:P09058|uniprotkb:Q8C2G6|ensembl:ENSMUSP00000099757 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:rs8_mouse(display_long)|uniprotkb:Rps8(gene name)|psi-mi:Rps8(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_033124.1|ensembl:ENSMUSG00000047675(gene)|ensembl:ENSMUST00000102696(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0016020"(membrane)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR001047(Ribosomal protein S8e)|interpro:IPR018283|interpro:IPR022309|interpro:IPR042563|mint:P62242|reactome:R-MMU-156827|reactome:R-MMU-1799339|reactome:R-MMU-6791226|reactome:R-MMU-72649|reactome:R-MMU-72689|reactome:R-MMU-72695|reactome:R-MMU-72702|reactome:R-MMU-72706|reactome:R-MMU-975956|reactome:R-MMU-975957|entrezgene/locuslink:20116(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint author-confidence:3.402776414223723 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:3rpCBdQyRWR+TCKnupbnCp30jKE10090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DD03 uniprotkb:Q7TSI3 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-4286465|uniprotkb:Q80TJ4|ensembl:ENSMUSP00000066736 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:pp6r1_mouse(display_long)|uniprotkb:Ppp6r1(gene name)|psi-mi:Ppp6r1(display_short)|uniprotkb:Kiaa1115(gene name synonym)|uniprotkb:Pp6r1(gene name synonym)|uniprotkb:Saps1(gene name synonym)|uniprotkb:SAPS domain family member 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571387|imex:IM-24977-54 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_766482.2|refseq:XP_011248858.1|ensembl:ENSMUSG00000052296(gene)|ensembl:ENSMUST00000064099(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0019888"(protein phosphatase regulator activity)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0043666"(regulation of phosphoprotein phosphatase activity)|interpro:IPR007587(SIT4 phosphatase-associated protein)|interpro:IPR016024(Armadillo-type fold)|reactome:R-MMU-204005|entrezgene/locuslink:243819(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint author-confidence:1.5124442405559255 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:ET7IE429eaRNAHpRwjds5XF7nrA10090 intact-crc:7F6BD7F9B7D2B1F8|rigid:Z02xYDVJGGLUKz+0jTFyvj54RcY false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DAI2 uniprotkb:Q3UHH1 intact:EBI-11571307|ensembl:ENSMUSP00000143488 intact:EBI-8419341|uniprotkb:Q8CE12|uniprotkb:Q8CHC3|intact:MINT-4115901|uniprotkb:Q9D789|uniprotkb:Q80Y41|uniprotkb:Q5U4B9|uniprotkb:Q6PCY6|uniprotkb:B2RX90|ensembl:ENSMUSP00000022358 psi-mi:ift22_mouse(display_long)|uniprotkb:Rab-like protein 5(gene name synonym)|uniprotkb:Rabl5(gene name synonym)|uniprotkb:Ift22(gene name)|psi-mi:Ift22(display_short) psi-mi:zswm8_mouse(display_long)|uniprotkb:Zswim8(gene name)|psi-mi:Zswim8(display_short)|uniprotkb:Kiaa0913(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571305|imex:IM-24977-53 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080349.1|ensembl:ENSMUSG00000007987(gene)|ensembl:ENSMUST00000200157(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0042073"(intraciliary transport)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67286(identity) refseq:NP_001239010.1|refseq:NP_001239011.1|refseq:NP_082272.1|ensembl:ENSMUSG00000021819(gene)|ensembl:ENSMUST00000022358(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031462"(Cul2-RING ubiquitin ligase complex)|go:"GO:0031463"(Cul3-RING ubiquitin ligase complex)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:1902667"(regulation of axon guidance)|go:"GO:1990756"(ubiquitin ligase-substrate adaptor activity)|go:"GO:2000627"(positive regulation of miRNA catabolic process)|interpro:IPR007527(Zinc finger, SWIM-type)|mint:Q3UHH1|entrezgene/locuslink:268721(identity) - - comment:mint|author-confidence:34.8883204603914 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:/9kyBuMlJDN7fIfoTEEXqwmESCA10090 rogid:C5V4tZMPbr+6VWuzv3N9p7BzPfw10090 intact-crc:57B98D8EEA47C922|rigid:e/ljD5NkHwQC/MXSsAAkcjizYvE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DAI2 uniprotkb:Q3UG70 intact:EBI-11571307|ensembl:ENSMUSP00000143488 intact:EBI-11569744 psi-mi:ift22_mouse(display_long)|uniprotkb:Rab-like protein 5(gene name synonym)|uniprotkb:Rabl5(gene name synonym)|uniprotkb:Ift22(gene name)|psi-mi:Ift22(display_short) psi-mi:q3ug70_mouse(display_long)|uniprotkb:Polg(gene name)|psi-mi:Polg(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571305|imex:IM-24977-53 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080349.1|ensembl:ENSMUSG00000007987(gene)|ensembl:ENSMUST00000200157(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0042073"(intraciliary transport)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67286(identity) interpro:IPR001098(DNA-directed DNA polymerase, family A)|interpro:IPR002297(DNA-directed DNA-polymerase, family A, mitochondria)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR019760|refseq:NP_059490.2|interpro:IPR041336|go:"GO:0003677"(DNA binding)|go:"GO:0003887"(DNA-directed DNA polymerase activity)|go:"GO:0005760"(gamma DNA polymerase complex)|go:"GO:0006260"(DNA replication)|go:"GO:0042645"(mitochondrial nucleoid)|interpro:IPR043502|entrezgene/locuslink:18975(identity) - - author-confidence:5.051595893748694 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:/9kyBuMlJDN7fIfoTEEXqwmESCA10090 rogid:VS+mx9xRypdm5KEiilWBZtfIBBM10090 intact-crc:57B98D8EEA47C922|rigid:e/ljD5NkHwQC/MXSsAAkcjizYvE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DAI2 uniprotkb:Q8BGQ7 intact:EBI-11571307|ensembl:ENSMUSP00000143488 intact:EBI-11566807|uniprotkb:Q8BXR0|ensembl:ENSMUSP00000034441 psi-mi:ift22_mouse(display_long)|uniprotkb:Rab-like protein 5(gene name synonym)|uniprotkb:Rabl5(gene name synonym)|uniprotkb:Ift22(gene name)|psi-mi:Ift22(display_short) psi-mi:syac_mouse(display_long)|uniprotkb:Aars1(gene name)|psi-mi:Aars1(display_short)|uniprotkb:Aars(gene name synonym)|uniprotkb:Alanyl-tRNA synthetase(gene name synonym)|uniprotkb:Protein sticky(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571305|imex:IM-24977-53 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080349.1|ensembl:ENSMUSG00000007987(gene)|ensembl:ENSMUST00000200157(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0042073"(intraciliary transport)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67286(identity) refseq:NP_666329.2|refseq:XP_006530984.1|refseq:XP_006530985.1|refseq:XP_006530987.1|ensembl:ENSMUSG00000031960(gene)|ensembl:ENSMUST00000034441(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0002161"(aminoacyl-tRNA editing activity)|go:"GO:0002196"("Ser-tRNA(Ala) hydrolase activity")|go:"GO:0004813"(alanine-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006400"(tRNA modification)|go:"GO:0006419"(alanyl-tRNA aminoacylation)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016597"(amino acid binding)|go:"GO:0021680"(cerebellar Purkinje cell layer development)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0045182"(translation regulator activity)|go:"GO:0050885"(neuromuscular process controlling balance)|go:"GO:0050905"(neuromuscular process)|go:"GO:0140018"(regulation of cytoplasmic translational fidelity)|interpro:IPR002318(Alanyl-tRNA synthetase, class IIc)|interpro:IPR003156(Phosphoesterase, DHHA1)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR012947(Threonyl/alanyl tRNA synthetase, SAD)|interpro:IPR018162|interpro:IPR018163|interpro:IPR018164|interpro:IPR018165|interpro:IPR023033|refseq:XP_017168237.1|entrezgene/locuslink:234734(identity) - - author-confidence:2.886192721060871 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:/9kyBuMlJDN7fIfoTEEXqwmESCA10090 rogid:AAJaTdSOMiW18YTZiS1MbVDYX5Y10090 intact-crc:57B98D8EEA47C922|rigid:e/ljD5NkHwQC/MXSsAAkcjizYvE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DAI2 uniprotkb:P62631 intact:EBI-11571307|ensembl:ENSMUSP00000143488 intact:EBI-642385|uniprotkb:P27706|ensembl:ENSMUSP00000054556 psi-mi:ift22_mouse(display_long)|uniprotkb:Rab-like protein 5(gene name synonym)|uniprotkb:Rabl5(gene name synonym)|uniprotkb:Ift22(gene name)|psi-mi:Ift22(display_short) psi-mi:ef1a2_mouse(display_long)|uniprotkb:Eukaryotic elongation factor 1 A-2(gene name synonym)|uniprotkb:Statin-S1(gene name synonym)|uniprotkb:Eef1a2(gene name)|psi-mi:Eef1a2(display_short)|uniprotkb:Eef1al(gene name synonym)|uniprotkb:Stn(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571305|imex:IM-24977-53 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080349.1|ensembl:ENSMUSG00000007987(gene)|ensembl:ENSMUST00000200157(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0042073"(intraciliary transport)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67286(identity) refseq:NP_031932.1|go:"GO:0003746"(translation elongation factor activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005853"(eukaryotic translation elongation factor 1 complex)|go:"GO:0006412"(translation)|go:"GO:0006414"(translational elongation)|go:"GO:0010035"(response to inorganic substance)|go:"GO:0019901"(protein kinase binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043209"(myelin sheath)|go:"GO:0045202"(synapse)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0090218"(positive regulation of lipid kinase activity)|interpro:IPR000795(Protein synthesis factor, GTP-binding)|interpro:IPR004160(Translation elongation factor EFTu/EF1A, C-terminal)|interpro:IPR004161(Translation elongation factor EFTu/EF1A, domain 2)|interpro:IPR004539(Translation elongation factor EF1A, eukaryotic and archaeal)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR009001(Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal)|interpro:IPR027417|interpro:IPR031157|mint:P62631|ensembl:ENSMUSG00000016349(gene)|ensembl:ENSMUST00000055990(transcript)|entrezgene/locuslink:13628(identity) - - author-confidence:1.5169067810981063 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:/9kyBuMlJDN7fIfoTEEXqwmESCA10090 rogid:5Wr8A9JfvVaH+KRGc6VSnF2rkYE10090 intact-crc:57B98D8EEA47C922|rigid:e/ljD5NkHwQC/MXSsAAkcjizYvE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DAI2 uniprotkb:F8VQ72 intact:EBI-11571307|ensembl:ENSMUSP00000143488 intact:EBI-11568627|ensembl:ENSMUSP00000104890 psi-mi:ift22_mouse(display_long)|uniprotkb:Rab-like protein 5(gene name synonym)|uniprotkb:Rabl5(gene name synonym)|uniprotkb:Ift22(gene name)|psi-mi:Ift22(display_short) psi-mi:f8vq72_mouse(display_long)|uniprotkb:Map3k1(gene name)|psi-mi:Map3k1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571305|imex:IM-24977-53 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080349.1|ensembl:ENSMUSG00000007987(gene)|ensembl:ENSMUST00000200157(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0042073"(intraciliary transport)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67286(identity) refseq:NP_036075.2|ensembl:ENSMUSG00000021754(gene)|ensembl:ENSMUST00000109267(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0008270"(zinc ion binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0071260"(cellular response to mechanical stimulus)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR007527(Zinc finger, SWIM-type)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|entrezgene/locuslink:26401(identity) - - author-confidence:8.95489085518342 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:/9kyBuMlJDN7fIfoTEEXqwmESCA10090 rogid:cinvweEfJuVaqUbDiqbZSOkbNwA10090 intact-crc:57B98D8EEA47C922|rigid:e/ljD5NkHwQC/MXSsAAkcjizYvE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DAI2 uniprotkb:Q7TME2 intact:EBI-11571307|ensembl:ENSMUSP00000143488 intact:EBI-2551232|ensembl:ENSMUSP00000045286|uniprotkb:Q8CH61|uniprotkb:B1AQC8 psi-mi:ift22_mouse(display_long)|uniprotkb:Rab-like protein 5(gene name synonym)|uniprotkb:Rabl5(gene name synonym)|uniprotkb:Ift22(gene name)|psi-mi:Ift22(display_short) psi-mi:spag5_mouse(display_long)|uniprotkb:Mastrin(gene name synonym)|uniprotkb:Mitotic spindle-associated protein p126(gene name synonym)|uniprotkb:Spag5(gene name)|psi-mi:Spag5(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571305|imex:IM-24977-53 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080349.1|ensembl:ENSMUSG00000007987(gene)|ensembl:ENSMUST00000200157(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0042073"(intraciliary transport)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67286(identity) go:"GO:0036064"(ciliary basal body)|go:"GO:0051294"(establishment of spindle orientation)|go:"GO:0051301"(cell division)|go:"GO:0051988"(regulation of attachment of spindle microtubules to kinetochore)|go:"GO:0071539"(protein localization to centrosome)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090235"(regulation of metaphase plate congression)|go:"GO:0097431"(mitotic spindle pole)|go:"GO:1905832"(positive regulation of spindle assembly)|interpro:IPR028728|ensembl:ENSMUSG00000002055(gene)|ensembl:ENSMUST00000045026(transcript)|go:"GO:0000070"(mitotic sister chromatid segregation)|go:"GO:0000776"(kinetochore)|go:"GO:0005737"(cytoplasm)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0007051"(spindle organization)|go:"GO:0007059"(chromosome segregation)|go:"GO:0008017"(microtubule binding)|go:"GO:0016604"(nuclear body)|go:"GO:0030496"(midbody)|go:"GO:0032388"(positive regulation of intracellular transport)|go:"GO:0034451"(centriolar satellite)|go:"GO:0035253"(ciliary rootlet)|go:"GO:0035371"(microtubule plus-end)|refseq:NP_059103.1|entrezgene/locuslink:54141(identity) - - author-confidence:3.566640902932603 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:/9kyBuMlJDN7fIfoTEEXqwmESCA10090 rogid:rWRtBlIeEsOudBt78Lgzu9Guw+U10090 intact-crc:57B98D8EEA47C922|rigid:e/ljD5NkHwQC/MXSsAAkcjizYvE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DAI2 uniprotkb:P23927 intact:EBI-11571307|ensembl:ENSMUSP00000143488 intact:EBI-299046|ensembl:ENSMUSP00000034562|ensembl:ENSMUSP00000149759|ensembl:ENSMUSP00000149803|ensembl:ENSMUSP00000150669|uniprotkb:Q64325 psi-mi:ift22_mouse(display_long)|uniprotkb:Rab-like protein 5(gene name synonym)|uniprotkb:Rabl5(gene name synonym)|uniprotkb:Ift22(gene name)|psi-mi:Ift22(display_short) psi-mi:cryab_mouse(display_long)|uniprotkb:Cryab(gene name)|psi-mi:Cryab(display_short)|uniprotkb:Crya2(gene name synonym)|uniprotkb:"Alpha(B)-crystallin"(gene name synonym)|uniprotkb:P23(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571305|imex:IM-24977-53 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080349.1|ensembl:ENSMUSG00000007987(gene)|ensembl:ENSMUST00000200157(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0042073"(intraciliary transport)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67286(identity) ensembl:ENSMUSG00000032060(gene)|ensembl:ENSMUST00000034562(transcript)|ensembl:ENSMUST00000214962(transcript)|ensembl:ENSMUST00000216755(transcript)|ensembl:ENSMUST00000217475(transcript)|go:"GO:0001540"(amyloid-beta binding)|go:"GO:0001666"(response to hypoxia)|go:"GO:0002088"(lens development in camera-type eye)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005212"(structural constituent of eye lens)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0007021"(tubulin complex assembly)|go:"GO:0007517"(muscle organ development)|go:"GO:0008017"(microtubule binding)|go:"GO:0008092"(cytoskeletal protein binding)|go:"GO:0009986"(cell surface)|go:"GO:0010259"(multicellular organism aging)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010941"(regulation of cell death)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0030018"(Z disc)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0030424"(axon)|go:"GO:0031109"(microtubule polymerization or depolymerization)|go:"GO:0031333"(negative regulation of protein-containing complex assembly)|go:"GO:0031430"(M band)|go:"GO:0031674"(I band)|go:"GO:0032355"(response to estradiol)|go:"GO:0032387"(negative regulation of intracellular transport)|go:"GO:0032432"(actin filament bundle)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043010"(camera-type eye development)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043154"(negative regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0043197"(dendritic spine)|go:"GO:0043204"(perikaryon)|go:"GO:0043209"(myelin sheath)|go:"GO:0043292"(contractile fiber)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045202"(synapse)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051403"(stress-activated MAPK cascade)|go:"GO:0060561"(apoptotic process involved in morphogenesis)|go:"GO:0071480"(cellular response to gamma radiation)|go:"GO:0097060"(synaptic membrane)|go:"GO:0097512"(cardiac myofibril)|go:"GO:1905907"(negative regulation of amyloid fibril formation)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|interpro:IPR001436(Alpha crystallin/Heat shock protein)|interpro:IPR002068(Heat shock protein Hsp20)|interpro:IPR003090(Alpha-crystallin, N-terminal)|interpro:IPR008978(HSP20-like chaperone)|interpro:IPR037882|mint:P23927|reactome:R-MMU-3371571|refseq:XP_006510033.1|refseq:NP_034094.1|refseq:NP_001276711.1|refseq:NP_001276713.1|refseq:NP_001276714.1|dip:DIP-31060N|entrezgene/locuslink:12955(identity) - - author-confidence:4.18407801234874 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:/9kyBuMlJDN7fIfoTEEXqwmESCA10090 rogid:LOp5smbeRceV8/P+Eaoh7p+24Vw10090 intact-crc:57B98D8EEA47C922|rigid:e/ljD5NkHwQC/MXSsAAkcjizYvE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DAI2 uniprotkb:Q5SSH7 intact:EBI-11571307|ensembl:ENSMUSP00000143488 intact:EBI-11566812|uniprotkb:Q8C710|uniprotkb:Q8CI54|uniprotkb:Q499C8|uniprotkb:Q6ZQC5 psi-mi:ift22_mouse(display_long)|uniprotkb:Rab-like protein 5(gene name synonym)|uniprotkb:Rabl5(gene name synonym)|uniprotkb:Ift22(gene name)|psi-mi:Ift22(display_short) psi-mi:zzef1_mouse(display_long)|uniprotkb:Kiaa0399(gene name synonym)|uniprotkb:Zzef1(gene name)|psi-mi:Zzef1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571305|imex:IM-24977-53 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080349.1|ensembl:ENSMUSG00000007987(gene)|ensembl:ENSMUST00000200157(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0042073"(intraciliary transport)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67286(identity) interpro:IPR040099|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR004939(Anaphase-promoting complex, subunit 10)|interpro:IPR008979(Galactose-binding like)|interpro:IPR011992(EF-Hand type)|refseq:NP_001039001.1|interpro:IPR041986|go:"GO:0005509"(calcium ion binding)|go:"GO:0008270"(zinc ion binding)|interpro:IPR043145|entrezgene/locuslink:195018(identity) - - author-confidence:2.6607451728698956 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:/9kyBuMlJDN7fIfoTEEXqwmESCA10090 rogid:YUjKPpOzsZy2UKAL6rwkhu6TYNA10090 intact-crc:57B98D8EEA47C922|rigid:e/ljD5NkHwQC/MXSsAAkcjizYvE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DAI2 uniprotkb:F8VPR5 intact:EBI-11571307|ensembl:ENSMUSP00000143488 intact:EBI-10989694|ensembl:ENSMUSP00000023165 psi-mi:ift22_mouse(display_long)|uniprotkb:Rab-like protein 5(gene name synonym)|uniprotkb:Rabl5(gene name synonym)|uniprotkb:Ift22(gene name)|psi-mi:Ift22(display_short) psi-mi:f8vpr5_mouse(display_long)|uniprotkb:Crebbp(gene name)|psi-mi:Crebbp(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571305|imex:IM-24977-53 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080349.1|ensembl:ENSMUSG00000007987(gene)|ensembl:ENSMUST00000200157(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0042073"(intraciliary transport)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67286(identity) refseq:NP_001020603.1|ensembl:ENSMUSG00000022521(gene)|ensembl:ENSMUST00000023165(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000123"(histone acetyltransferase complex)|go:"GO:0000785"(chromatin)|go:"GO:0001223"(transcription coactivator binding)|go:"GO:0002039"(p53 binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004402"(histone acetyltransferase activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016604"(nuclear body)|go:"GO:0018076"(N-terminal peptidyl-lysine acetylation)|go:"GO:0030511"(positive regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0031648"(protein destabilization)|go:"GO:0034644"(cellular response to UV)|go:"GO:0043426"(MRF binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048511"(rhythmic process)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1990258"(histone glutamine methylation)|interpro:IPR000197(Zinc finger, TAZ-type)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001487(Bromodomain)|interpro:IPR003101(Coactivator CBP, KIX)|interpro:IPR009110(Nuclear receptor coactivator, interlocking)|interpro:IPR010303(Protein of unknown function DUF902, CREBbp)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013178(H3K56 histone acetylation protein, RTT109)|interpro:IPR014744(Nuclear receptor coactivator, CREB-bp-like, interlocking)|interpro:IPR018359|interpro:IPR031162|interpro:IPR035898|interpro:IPR036427|interpro:IPR036529|interpro:IPR037073|interpro:IPR038547|interpro:IPR043145|go:"GO:0005737"(cytoplasm)|entrezgene/locuslink:12914(identity) - - author-confidence:2.195212943509592 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:/9kyBuMlJDN7fIfoTEEXqwmESCA10090 rogid:9K1igrA8QbILB/vG1/XLKh9kzJM10090 intact-crc:57B98D8EEA47C922|rigid:e/ljD5NkHwQC/MXSsAAkcjizYvE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DAI2 uniprotkb:B8JJE0 intact:EBI-11571307|ensembl:ENSMUSP00000143488 intact:EBI-11571311|ensembl:ENSMUSP00000093245 psi-mi:ift22_mouse(display_long)|uniprotkb:Rab-like protein 5(gene name synonym)|uniprotkb:Rabl5(gene name synonym)|uniprotkb:Ift22(gene name)|psi-mi:Ift22(display_short) psi-mi:b8jje0_mouse(display_long)|uniprotkb:Gpr98(gene name synonym)|uniprotkb:Adgrv1(gene name)|psi-mi:Adgrv1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571305|imex:IM-24977-53 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080349.1|ensembl:ENSMUSG00000007987(gene)|ensembl:ENSMUST00000200157(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0042073"(intraciliary transport)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67286(identity) refseq:NP_473394.3|interpro:IPR017981|interpro:IPR026919|interpro:IPR038081|ensembl:ENSMUSG00000069170(gene)|ensembl:ENSMUST00000095585(transcript)|go:"GO:0004930"(G protein-coupled receptor activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0007166"(cell surface receptor signaling pathway)|go:"GO:0007194"(negative regulation of adenylate cyclase activity)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0009986"(cell surface)|go:"GO:0016021"(integral component of membrane)|go:"GO:0032420"(stereocilium)|go:"GO:0043235"(receptor complex)|go:"GO:0045202"(synapse)|go:"GO:0045494"(photoreceptor cell maintenance)|go:"GO:0048496"(maintenance of animal organ identity)|go:"GO:0050953"(sensory perception of light stimulus)|interpro:IPR000203(GPS)|interpro:IPR000832(GPCR, family 2, secretin-like)|interpro:IPR003644(Na-Ca exchanger/integrin-beta4)|interpro:IPR005492(EPTP)|interpro:IPR006558(LamG-like jellyroll fold)|interpro:IPR009039(EAR)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|entrezgene/locuslink:110789(identity) - - author-confidence:1.2304116782900973 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:/9kyBuMlJDN7fIfoTEEXqwmESCA10090 rogid:Xwxv3CY+G+obeCkoE1BvH5DIE4Y10090 intact-crc:57B98D8EEA47C922|rigid:e/ljD5NkHwQC/MXSsAAkcjizYvE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DAI2 uniprotkb:Q8BUZ3 intact:EBI-11571307|ensembl:ENSMUSP00000143488 intact:EBI-9672746|ensembl:ENSMUSP00000052320 psi-mi:ift22_mouse(display_long)|uniprotkb:Rab-like protein 5(gene name synonym)|uniprotkb:Rabl5(gene name synonym)|uniprotkb:Ift22(gene name)|psi-mi:Ift22(display_short) psi-mi:tigd4_mouse(display_long)|uniprotkb:Tigd4(gene name)|psi-mi:Tigd4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571305|imex:IM-24977-53 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080349.1|ensembl:ENSMUSG00000007987(gene)|ensembl:ENSMUST00000200157(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0042073"(intraciliary transport)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67286(identity) refseq:NP_997161.1|ensembl:ENSMUSG00000047819(gene)|ensembl:ENSMUST00000062623(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|interpro:IPR004875(CENP-B protein)|interpro:IPR006600(Centromere protein B, helix-turn-helix)|interpro:IPR007889(Helix-turn-helix, Psq)|interpro:IPR009057(Homeodomain-like)|entrezgene/locuslink:403175(identity) - - author-confidence:1.6704181757491265 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:/9kyBuMlJDN7fIfoTEEXqwmESCA10090 rogid:aJTTdBfPg6CM6pX8/jJtBx+SXsA10090 intact-crc:57B98D8EEA47C922|rigid:e/ljD5NkHwQC/MXSsAAkcjizYvE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9DAI2 uniprotkb:Q9CZX9 intact:EBI-11571307|ensembl:ENSMUSP00000143488 intact:EBI-11516104|uniprotkb:A2AGJ7|uniprotkb:Q9D1D9|ensembl:ENSMUSP00000028551 psi-mi:ift22_mouse(display_long)|uniprotkb:Rab-like protein 5(gene name synonym)|uniprotkb:Rabl5(gene name synonym)|uniprotkb:Ift22(gene name)|psi-mi:Ift22(display_short) psi-mi:emc4_mouse(display_long)|uniprotkb:Emc4(gene name)|psi-mi:Emc4(display_short)|uniprotkb:Tmem85(gene name synonym)|uniprotkb:Transmembrane protein 85(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571305|imex:IM-24977-53 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080349.1|ensembl:ENSMUSG00000007987(gene)|ensembl:ENSMUST00000200157(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005813"(centrosome)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0030992"(intraciliary transport particle B)|go:"GO:0042073"(intraciliary transport)|interpro:IPR027417|reactome:R-MMU-5620924|entrezgene/locuslink:67286(identity) refseq:NP_080795.1|ensembl:ENSMUSG00000027131(gene)|ensembl:ENSMUST00000028551(transcript)|go:"GO:0006915"(apoptotic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0032977"(membrane insertase activity)|go:"GO:0045050"(protein insertion into ER membrane by stop-transfer membrane-anchor sequence)|go:"GO:0071816"(tail-anchored membrane protein insertion into ER membrane)|go:"GO:0072546"(EMC complex)|interpro:IPR009445(Protein of unknown function DUF1077)|entrezgene/locuslink:68032(identity) - - author-confidence:3.482923642361291 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:/9kyBuMlJDN7fIfoTEEXqwmESCA10090 rogid:P6XioYpYtpB5/WITC1ZIGHJEJCE10090 intact-crc:57B98D8EEA47C922|rigid:e/ljD5NkHwQC/MXSsAAkcjizYvE false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9ERI2 uniprotkb:A2AFR3 intact:EBI-398172|ensembl:ENSMUSP00000034722|ensembl:ENSMUSP00000139310 intact:EBI-11571465|uniprotkb:B9EIG4|uniprotkb:Q80U41|uniprotkb:Q3UHI9|uniprotkb:Q3UHE4|ensembl:ENSMUSP00000107777 psi-mi:rb27a_mouse(display_long)|uniprotkb:Rab27a(gene name)|psi-mi:Rab27a(display_short) psi-mi:frpd4_mouse(display_long)|uniprotkb:Gm196(gene name synonym)|uniprotkb:Kiaa0316(gene name synonym)|uniprotkb:PDZ domain-containing protein 10(gene name synonym)|uniprotkb:PSD-95-interacting regulator of spine morphogenesis(gene name synonym)|uniprotkb:Pdzd10(gene name synonym)|uniprotkb:Pdzk10(gene name synonym)|uniprotkb:Frmpd4(gene name)|psi-mi:Frmpd4(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571474|imex:IM-24977-55 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076124.1|ensembl:ENSMUSG00000032202(gene)|ensembl:ENSMUST00000034722(transcript)|ensembl:ENSMUST00000184146(transcript)|go:"GO:0001750"(photoreceptor outer segment)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006605"(protein targeting)|go:"GO:0006887"(exocytosis)|go:"GO:0007596"(blood coagulation)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030141"(secretory granule)|go:"GO:0030318"(melanocyte differentiation)|go:"GO:0030425"(dendrite)|go:"GO:0030667"(secretory granule membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0032400"(melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0033093"(Weibel-Palade body)|go:"GO:0036257"(multivesicular body organization)|go:"GO:0042470"(melanosome)|go:"GO:0043316"(cytotoxic T cell degranulation)|go:"GO:0043320"(natural killer cell degranulation)|go:"GO:0043473"(pigmentation)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0050766"(positive regulation of phagocytosis)|go:"GO:0051875"(pigment granule localization)|go:"GO:0051904"(pigment granule transport)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071985"(multivesicular body sorting pathway)|go:"GO:0097278"(complement-dependent cytotoxicity)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1903428"(positive regulation of reactive oxygen species biosynthetic process)|go:"GO:1903435"(positive regulation of constitutive secretory pathway)|go:"GO:1990182"(exosomal secretion)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041837|rcsb pdb:3BC1|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_001288159.1|refseq:NP_001288161.1|refseq:XP_006510843.1|dip:DIP-31054N|entrezgene/locuslink:11891(identity) refseq:NP_001028502.1|refseq:NP_001277356.1|refseq:NP_001277357.1|ensembl:ENSMUSG00000049176(gene)|ensembl:ENSMUST00000112149(transcript)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005856"(cytoskeleton)|go:"GO:0014069"(postsynaptic density)|go:"GO:0032991"(protein-containing complex)|go:"GO:0043197"(dendritic spine)|go:"GO:0051835"(positive regulation of synapse structural plasticity)|go:"GO:0098974"(postsynaptic actin cytoskeleton organization)|go:"GO:0098978"(glutamatergic synapse)|interpro:IPR000299(Band 4.1, N-terminal)|interpro:IPR001202(WW/Rsp5/WWP)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR014352(FERM/acyl-CoA-binding protein, 3-helical bundle)|interpro:IPR019748|interpro:IPR019749|interpro:IPR029071|interpro:IPR035963|interpro:IPR036020|interpro:IPR036034|interpro:IPR041779|entrezgene/locuslink:333605(identity) - - author-confidence:8.649831583719937 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:IAq2IfXZTw2jSr+7LqNaJ03f/+g10090 rogid:kBvnutK5moc3m5vPRD9281Y+YQ810090 intact-crc:F6EC60E4DDA9B68E|rigid:n9fjULVCVAZyX513IFwxL1CQ+GQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9ERI2 uniprotkb:Q99P58 intact:EBI-398172|ensembl:ENSMUSP00000034722|ensembl:ENSMUSP00000139310 intact:EBI-11565917|uniprotkb:Q8CIX0|ensembl:ENSMUSP00000068349|ensembl:ENSMUSP00000112807|ensembl:ENSMUSP00000114094 psi-mi:rb27a_mouse(display_long)|uniprotkb:Rab27a(gene name)|psi-mi:Rab27a(display_short) psi-mi:rb27b_mouse(display_long)|uniprotkb:Rab27b(gene name)|psi-mi:Rab27b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571474|imex:IM-24977-55 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076124.1|ensembl:ENSMUSG00000032202(gene)|ensembl:ENSMUST00000034722(transcript)|ensembl:ENSMUST00000184146(transcript)|go:"GO:0001750"(photoreceptor outer segment)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006605"(protein targeting)|go:"GO:0006887"(exocytosis)|go:"GO:0007596"(blood coagulation)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030141"(secretory granule)|go:"GO:0030318"(melanocyte differentiation)|go:"GO:0030425"(dendrite)|go:"GO:0030667"(secretory granule membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0032400"(melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0033093"(Weibel-Palade body)|go:"GO:0036257"(multivesicular body organization)|go:"GO:0042470"(melanosome)|go:"GO:0043316"(cytotoxic T cell degranulation)|go:"GO:0043320"(natural killer cell degranulation)|go:"GO:0043473"(pigmentation)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0050766"(positive regulation of phagocytosis)|go:"GO:0051875"(pigment granule localization)|go:"GO:0051904"(pigment granule transport)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071985"(multivesicular body sorting pathway)|go:"GO:0097278"(complement-dependent cytotoxicity)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1903428"(positive regulation of reactive oxygen species biosynthetic process)|go:"GO:1903435"(positive regulation of constitutive secretory pathway)|go:"GO:1990182"(exosomal secretion)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041837|rcsb pdb:3BC1|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_001288159.1|refseq:NP_001288161.1|refseq:XP_006510843.1|dip:DIP-31054N|entrezgene/locuslink:11891(identity) refseq:NP_001076022.1|refseq:NP_001289727.1|refseq:NP_085031.3|ensembl:ENSMUSG00000024511(gene)|ensembl:ENSMUST00000069749(transcript)|ensembl:ENSMUST00000117692(transcript)|ensembl:ENSMUST00000121693(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030141"(secretory granule)|go:"GO:0030667"(secretory granule membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0071985"(multivesicular body sorting pathway)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0099641"(anterograde axonal protein transport)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041837|rcsb pdb:2IEY|rcsb pdb:2IEZ|rcsb pdb:2IF0|rcsb pdb:2ZET|reactome:R-MMU-114608|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-46237N|entrezgene/locuslink:80718(identity) - - author-confidence:7.262873983210137 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:IAq2IfXZTw2jSr+7LqNaJ03f/+g10090 rogid:R+P/aw+uO3tZcL5SFU6K0WwbOY410090 intact-crc:F6EC60E4DDA9B68E|rigid:n9fjULVCVAZyX513IFwxL1CQ+GQ false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9JKM7 uniprotkb:O54774 intact:EBI-444699|uniprotkb:Q8C7E1 intact:EBI-775247|ensembl:ENSMUSP00000020420 psi-mi:rab37_mouse(display_long)|uniprotkb:Rab37(gene name)|psi-mi:Rab37(display_short) psi-mi:ap3d1_mouse(display_long)|uniprotkb:AP-3 complex subunit delta(gene name synonym)|uniprotkb:Delta-adaptin(gene name synonym)|uniprotkb:Ap3d1(gene name)|psi-mi:Ap3d1(display_short)|uniprotkb:Ap3d(gene name synonym)|uniprotkb:Adaptor-related protein complex 3 subunit delta-1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571492|imex:IM-24977-56 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_067386.3|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0015031"(protein transport)|go:"GO:0030141"(secretory granule)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-8873719|entrezgene/locuslink:58222(identity) refseq:NP_031486.1|dip:DIP-32163N|ensembl:ENSMUSG00000020198(gene)|ensembl:ENSMUST00000020420(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006829"(zinc ion transport)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006896"(Golgi to vacuole transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0010008"(endosome membrane)|go:"GO:0016182"(synaptic vesicle budding from endosome)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030123"(AP-3 adaptor complex)|go:"GO:0030424"(axon)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0043195"(terminal bouton)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048007"(antigen processing and presentation, exogenous lipid antigen via MHC class Ib)|go:"GO:0048490"(anterograde synaptic vesicle transport)|go:"GO:0048499"(synaptic vesicle membrane organization)|go:"GO:0051138"(positive regulation of NK T cell differentiation)|go:"GO:0061088"(regulation of sequestering of zinc ion)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0098793"(presynapse)|go:"GO:0098794"(postsynapse)|go:"GO:0098830"(presynaptic endosome)|go:"GO:0098943"(neurotransmitter receptor transport, postsynaptic endosome to lysosome)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099003"(vesicle-mediated transport in synapse)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR002553(Clathrin/coatomer adaptor, adaptin-like, N-terminal)|interpro:IPR010474(Bovine leukaemia virus receptor)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR017105(Adaptor protein complex AP-3, delta subunit)|mint:O54774|entrezgene/locuslink:11776(identity) - - author-confidence:1.3362631399506264 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:e0z4I79OQSZSGejZss4AbqTnswg10090 rogid:q83u6ORB4zYNuQihE4PI1rhvSkY10090 intact-crc:082E9BD88C766AE3|rigid:UerJNjgpUZxGGtrL3y6Awe3DxMM false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9JKM7 uniprotkb:P62823 intact:EBI-444699|uniprotkb:Q8C7E1 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 psi-mi:rab37_mouse(display_long)|uniprotkb:Rab37(gene name)|psi-mi:Rab37(display_short) psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571492|imex:IM-24977-56 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_067386.3|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0015031"(protein transport)|go:"GO:0030141"(secretory granule)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-8873719|entrezgene/locuslink:58222(identity) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) - - author-confidence:1.0686892090414641 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:e0z4I79OQSZSGejZss4AbqTnswg10090 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 intact-crc:082E9BD88C766AE3|rigid:UerJNjgpUZxGGtrL3y6Awe3DxMM false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9JKM7 uniprotkb:Q8BHC1 intact:EBI-444699|uniprotkb:Q8C7E1 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab37_mouse(display_long)|uniprotkb:Rab37(gene name)|psi-mi:Rab37(display_short) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571492|imex:IM-24977-56 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_067386.3|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0015031"(protein transport)|go:"GO:0030141"(secretory granule)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-8873719|entrezgene/locuslink:58222(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - - author-confidence:1.0797563095860725 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:e0z4I79OQSZSGejZss4AbqTnswg10090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:082E9BD88C766AE3|rigid:UerJNjgpUZxGGtrL3y6Awe3DxMM false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q8BNW9 uniprotkb:Q9R0M6 intact:EBI-11571515|uniprotkb:A3KME3|ensembl:ENSMUSP00000068321|ensembl:ENSMUSP00000139292 intact:EBI-6552247|ensembl:ENSMUSP00000123325 psi-mi:kbtbb_mouse(display_long)|uniprotkb:Kiaa0711(gene name synonym)|uniprotkb:Kbtbd11(gene name)|psi-mi:Kbtbd11(display_short) psi-mi:rab9a_mouse(display_long)|uniprotkb:Rab9a(gene name)|psi-mi:Rab9a(display_short)|uniprotkb:Rab9(gene name synonym)|uniprotkb:Sid99(gene name synonym)|uniprotkb:Sid 99(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571520|imex:IM-24977-57 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083392.1|refseq:XP_006508978.1|refseq:XP_006508979.1|ensembl:ENSMUSG00000055675(gene)|ensembl:ENSMUST00000069399(transcript)|ensembl:ENSMUST00000183471(transcript)|interpro:IPR000210(BTB/POZ-like)|interpro:IPR006652(Kelch repeat type 1)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR015915(Kelch-type beta propeller)|entrezgene/locuslink:74901(identity) ensembl:ENSMUSG00000079316(gene)|ensembl:ENSMUST00000112091(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0019003"(GDP binding)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042470"(melanosome)|go:"GO:0042802"(identical protein binding)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0052405"|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041824|rcsb pdb:1YZL|rcsb pdb:4QXA|reactome:R-MMU-6811440|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-9706019|refseq:XP_006528985.1|refseq:NP_062747.1|dip:DIP-61068N|entrezgene/locuslink:56382(identity) - author-confidence:2.8512064032101727 - figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:yLjX0Q7abh2OYDB/pJOie3k+9Ks10090 rogid:rLz70Qf4CwKMgzlwZXOhJDQK4SI10090 intact-crc:755D1AB10C8C2AB6|rigid:I6MvH1Wk4Bc4oUuIAzAur8XpzXo false - tandem tag:n-n - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9WTL2 uniprotkb:Q6PDM1 intact:EBI-309361|uniprotkb:Q9D1P3|ensembl:ENSMUSP00000008745 intact:EBI-647298|uniprotkb:A3KFP2|uniprotkb:A3KFP4|uniprotkb:Q27QB3|uniprotkb:Q3TTE5|uniprotkb:Q80XS0|uniprotkb:Q8BPN3|uniprotkb:Q9D5C9|uniprotkb:Q9CXF9|ensembl:ENSMUSP00000042792 psi-mi:rab25_mouse(display_long)|uniprotkb:Rab25(gene name)|psi-mi:Rab25(display_short) psi-mi:msl1_mouse(display_long)|uniprotkb:Male-specific lethal-1 homolog 1(gene name synonym)|uniprotkb:Hampin(gene name synonym)|uniprotkb:Msl1(gene name)|psi-mi:Msl1(display_short)|uniprotkb:Msl1l1(gene name synonym)|uniprotkb:Male-specific lethal 1-like 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571533|imex:IM-24977-58 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_058595.2|ensembl:ENSMUSG00000008601(gene)|ensembl:ENSMUST00000008745(transcript)|go:"GO:0003382"(epithelial cell morphogenesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0006887"(exocytosis)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0015031"(protein transport)|go:"GO:0031143"(pseudopodium)|go:"GO:0031260"(pseudopodium membrane)|go:"GO:0031268"(pseudopodium organization)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0060627"(regulation of vesicle-mediated transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0010634"(positive regulation of epithelial cell migration)|entrezgene/locuslink:53868(identity) refseq:NP_082998.2|refseq:XP_006534414.1|refseq:XP_011247586.1|ensembl:ENSMUSG00000052915(gene)|ensembl:ENSMUST00000037915(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0016607"(nuclear speck)|go:"GO:0043984"(histone H4-K16 acetylation)|go:"GO:0072487"(MSL complex)|interpro:IPR026711|interpro:IPR029332|interpro:IPR031840|rcsb pdb:2Y0M|rcsb pdb:2Y0N|reactome:R-MMU-3214847|entrezgene/locuslink:74026(identity) - - author-confidence:1.4351530383653537 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:3ATlvVvZX/SLerVIyq5DP25Uk8E10090 rogid:hDTSo9VwaBRE+xxSuqdxx6p1SjA10090 intact-crc:A0D420BD85E4D034|rigid:zZxQv+lP2NzRcfwWtRWZW8WGq0U false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q9WTL2 uniprotkb:Q9DB54 intact:EBI-309361|uniprotkb:Q9D1P3|ensembl:ENSMUSP00000008745 intact:EBI-11567974|uniprotkb:Q6PFA4|uniprotkb:Q3UD74|ensembl:ENSMUSP00000031419 psi-mi:rab25_mouse(display_long)|uniprotkb:Rab25(gene name)|psi-mi:Rab25(display_short) psi-mi:f216a_mouse(display_long)|uniprotkb:Fam216a(gene name)|psi-mi:Fam216a(display_short) psi-mi:"MI:0676"(tandem affinity purification) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11571533|imex:IM-24977-58 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_058595.2|ensembl:ENSMUSG00000008601(gene)|ensembl:ENSMUST00000008745(transcript)|go:"GO:0003382"(epithelial cell morphogenesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0006887"(exocytosis)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0015031"(protein transport)|go:"GO:0031143"(pseudopodium)|go:"GO:0031260"(pseudopodium membrane)|go:"GO:0031268"(pseudopodium organization)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0060627"(regulation of vesicle-mediated transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|go:"GO:0010634"(positive regulation of epithelial cell migration)|entrezgene/locuslink:53868(identity) refseq:NP_081159.1|ensembl:ENSMUSG00000029463(gene)|ensembl:ENSMUST00000031419(transcript)|interpro:IPR029373|entrezgene/locuslink:68948(identity) - - author-confidence:1.116170640410268 figure legend:Table S3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:3ATlvVvZX/SLerVIyq5DP25Uk8E10090 rogid:esvXrLMS1/ukGuV5x3AuEOI+u0s10090 intact-crc:A0D420BD85E4D034|rigid:zZxQv+lP2NzRcfwWtRWZW8WGq0U false tandem tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P55258 uniprotkb:P61027 intact:EBI-398411|uniprotkb:Q8VCF6|ensembl:ENSMUSP00000003121 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 psi-mi:rab8a_mouse(display_long)|uniprotkb:Rab8a(gene name)|psi-mi:Rab8a(display_short)|uniprotkb:Mel(gene name synonym)|uniprotkb:Rab8(gene name synonym)|uniprotkb:Oncogene c-mel(gene name synonym) psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571553|imex:IM-24977-59 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_075615.2|dip:DIP-31053N|ensembl:ENSMUSG00000003037(gene)|ensembl:ENSMUST00000003121(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0014069"(postsynaptic density)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0045202"(synapse)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097546"(ciliary base)|go:"GO:0097730"(non-motile cilium)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098969"(neurotransmitter receptor transport to postsynaptic membrane)|go:"GO:0099003"(vesicle-mediated transport in synapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P55258|rcsb pdb:2FU5|reactome:R-MMU-2565942|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0098978"(glutamatergic synapse)|entrezgene/locuslink:17274(identity) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) - - - figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:SE+1h+U6C8cAN2UTBIDapsUt4zA10090 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 intact-crc:EB4934823BD6E065|rigid:xrwDAO+xTagw1bEpgo6tV0Izsac false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P61027 uniprotkb:P61028 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 intact:EBI-911674|ensembl:ENSMUSP00000041857|uniprotkb:Q3U1Z3 psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:rab8b_mouse(display_long)|uniprotkb:Rab8b(gene name)|psi-mi:Rab8b(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571565|imex:IM-24977-60 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) refseq:NP_775589.1|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098793"(presynapse)|go:"GO:0150115"(cell-substrate junction organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|ensembl:ENSMUSG00000036943(gene)|ensembl:ENSMUST00000041139(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016604"(nuclear body)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031346"(positive regulation of cell projection organization)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045046"(protein import into peroxisome membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051286"(cell tip)|go:"GO:0051461"(positive regulation of corticotropin secretion)|entrezgene/locuslink:235442(identity) - - - figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 rogid:bRfYongYDkw/3XyTJ8jMVUZ001E10090 intact-crc:9546FC900D3B9618|rigid:H21mNGoZkaHFWKxlhtTUQw3txjU false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P46638 uniprotkb:P62492 intact:EBI-1634944|ensembl:ENSMUSP00000110021 intact:EBI-770256|uniprotkb:P24410|uniprotkb:Q3V1Z6|uniprotkb:Q9JLX1|ensembl:ENSMUSP00000129163 psi-mi:rb11b_mouse(display_long)|uniprotkb:Rab11b(gene name)|psi-mi:Rab11b(display_short) psi-mi:rb11a_mouse(display_long)|uniprotkb:Rab11a(gene name)|psi-mi:Rab11a(display_short)|uniprotkb:Rab11(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571589|imex:IM-24977-62 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033023.1|ensembl:ENSMUSG00000077450(gene)|ensembl:ENSMUST00000057373(transcript)|go:"GO:0001881"(receptor recycling)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0006887"(exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0019003"(GDP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032456"(endocytic recycling)|go:"GO:0033572"(transferrin transport)|go:"GO:0035773"(insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0044070"(regulation of anion transport)|go:"GO:0045054"(constitutive secretory pathway)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0071468"(cellular response to acidic pH)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000008"(regulation of protein localization to cell surface)|go:"GO:2001135"(regulation of endocytic recycling)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P46638|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19326(identity) refseq:NP_059078.2|ensembl:ENSMUSG00000004771(gene)|ensembl:ENSMUST00000172298(transcript)|go:"GO:0000922"(spindle pole)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005771"(multivesicular body)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005813"(centrosome)|go:"GO:0005828"(kinetochore microtubule)|go:"GO:0006887"(exocytosis)|go:"GO:0007080"(mitotic metaphase plate congression)|go:"GO:0008017"(microtubule binding)|go:"GO:0010634"(positive regulation of epithelial cell migration)|go:"GO:0010796"(regulation of multivesicular body size)|go:"GO:0010971"(positive regulation of G2/M transition of mitotic cell cycle)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030133"(transport vesicle)|go:"GO:0030424"(axon)|go:"GO:0030953"(astral microtubule organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032402"(melanosome transport)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034451"(centriolar satellite)|go:"GO:0036258"(multivesicular body assembly)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045773"(positive regulation of axon extension)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0051650"(establishment of vesicle localization)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060627"(regulation of vesicle-mediated transport)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072594"(establishment of protein localization to organelle)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0090307"(mitotic spindle assembly)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098837"(postsynaptic recycling endosome)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099003"(vesicle-mediated transport in synapse)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:1903078"(positive regulation of protein localization to plasma membrane)|go:"GO:1990182"(exosomal secretion)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62492|reactome:R-MMU-432040|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|go:"GO:0034394"(protein localization to cell surface)|entrezgene/locuslink:53869(identity) - - - figure legend:"fig 3D (IV)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:McbcmcV5cB7IE3GFkiDNIB5WcsM10090 rogid:FjkzGzN2VDTyv94M9vD/EJC2qoU10090 intact-crc:C5738A19B3E0ED72|rigid:jjxeCx2pH5sjeyvr//urueqI7cs false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9D1G1 uniprotkb:P61027 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571577|imex:IM-24977-61 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic - figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 intact-crc:E188AC1E61CE8DF0|rigid:CVewimXkXWQzqkOhmR1qrMwt7KY false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9DD03 uniprotkb:P55258 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-398411|uniprotkb:Q8VCF6|ensembl:ENSMUSP00000003121 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:rab8a_mouse(display_long)|uniprotkb:Rab8a(gene name)|psi-mi:Rab8a(display_short)|uniprotkb:Mel(gene name synonym)|uniprotkb:Rab8(gene name synonym)|uniprotkb:Oncogene c-mel(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571601|imex:IM-24977-63 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_075615.2|dip:DIP-31053N|ensembl:ENSMUSG00000003037(gene)|ensembl:ENSMUST00000003121(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0014069"(postsynaptic density)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0045202"(synapse)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097546"(ciliary base)|go:"GO:0097730"(non-motile cilium)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098969"(neurotransmitter receptor transport to postsynaptic membrane)|go:"GO:0099003"(vesicle-mediated transport in synapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P55258|rcsb pdb:2FU5|reactome:R-MMU-2565942|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0098978"(glutamatergic synapse)|entrezgene/locuslink:17274(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint - figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:SE+1h+U6C8cAN2UTBIDapsUt4zA10090 intact-crc:C4932BD04A0A7A94|rigid:ZB5GkjvsvD054rNcwxwfz+hVlDs false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9DD03 uniprotkb:P61028 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-911674|ensembl:ENSMUSP00000041857|uniprotkb:Q3U1Z3 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:rab8b_mouse(display_long)|uniprotkb:Rab8b(gene name)|psi-mi:Rab8b(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571613|imex:IM-24977-64 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_775589.1|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098793"(presynapse)|go:"GO:0150115"(cell-substrate junction organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|ensembl:ENSMUSG00000036943(gene)|ensembl:ENSMUST00000041139(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016604"(nuclear body)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031346"(positive regulation of cell projection organization)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045046"(protein import into peroxisome membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051286"(cell tip)|go:"GO:0051461"(positive regulation of corticotropin secretion)|entrezgene/locuslink:235442(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint - figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:bRfYongYDkw/3XyTJ8jMVUZ001E10090 intact-crc:28264950BDFE703E|rigid:Y7dspHyeDdasK3GJxRbULvWYdvU false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9DD03 uniprotkb:P61027 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571625|imex:IM-24977-65 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint - figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 intact-crc:E9E34FC9ED8C177D|rigid:/N5PUsTEg2YyuwYxXN5q2VNryd8 false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9D1G1 uniprotkb:Q9DD03 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571637|imex:IM-24977-66 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 intact-crc:CE020B87AD875F04|rigid:8qIgPIZDJwdAN5gyiLDlJY42PGE false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P35282 uniprotkb:P35293 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-8304813|ensembl:ENSMUSP00000157011|intact:MINT-1864434|uniprotkb:Q543V0 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:rab18_mouse(display_long)|uniprotkb:Rab18(gene name)|psi-mi:Rab18(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571649|imex:IM-24977-67 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) ensembl:ENSMUSG00000073639(gene)|ensembl:ENSMUST00000234810(transcript)|go:"GO:0001654"(eye development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007420"(brain development)|go:"GO:0012505"(endomembrane system)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0034389"(lipid droplet organization)|go:"GO:0045202"(synapse)|go:"GO:0051170"(import into nucleus)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR025662|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_851415.1|entrezgene/locuslink:19330(identity) - - function:Plays a role in apical endocytosis/recycling. May be implicated in transport between the plasma membrane and early endosomes|comment:mint|comment:homomint figure legend:"fig. 3E (VII)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:GBb4x3HIoXCUA2ikZcE28uJtGGM10090 intact-crc:F977FA4B4A647ACF|rigid:5ouYw4wXcO9kIo1kA12ojGN0Ke0 false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9ERI2 uniprotkb:Q99P58 intact:EBI-398172|ensembl:ENSMUSP00000034722|ensembl:ENSMUSP00000139310 intact:EBI-11565917|uniprotkb:Q8CIX0|ensembl:ENSMUSP00000068349|ensembl:ENSMUSP00000112807|ensembl:ENSMUSP00000114094 psi-mi:rb27a_mouse(display_long)|uniprotkb:Rab27a(gene name)|psi-mi:Rab27a(display_short) psi-mi:rb27b_mouse(display_long)|uniprotkb:Rab27b(gene name)|psi-mi:Rab27b(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571661|imex:IM-24977-68 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076124.1|ensembl:ENSMUSG00000032202(gene)|ensembl:ENSMUST00000034722(transcript)|ensembl:ENSMUST00000184146(transcript)|go:"GO:0001750"(photoreceptor outer segment)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006605"(protein targeting)|go:"GO:0006887"(exocytosis)|go:"GO:0007596"(blood coagulation)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030141"(secretory granule)|go:"GO:0030318"(melanocyte differentiation)|go:"GO:0030425"(dendrite)|go:"GO:0030667"(secretory granule membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0032400"(melanosome localization)|go:"GO:0032402"(melanosome transport)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0033093"(Weibel-Palade body)|go:"GO:0036257"(multivesicular body organization)|go:"GO:0042470"(melanosome)|go:"GO:0043316"(cytotoxic T cell degranulation)|go:"GO:0043320"(natural killer cell degranulation)|go:"GO:0043473"(pigmentation)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0050766"(positive regulation of phagocytosis)|go:"GO:0051875"(pigment granule localization)|go:"GO:0051904"(pigment granule transport)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071985"(multivesicular body sorting pathway)|go:"GO:0097278"(complement-dependent cytotoxicity)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1903428"(positive regulation of reactive oxygen species biosynthetic process)|go:"GO:1903435"(positive regulation of constitutive secretory pathway)|go:"GO:1990182"(exosomal secretion)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041837|rcsb pdb:3BC1|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_001288159.1|refseq:NP_001288161.1|refseq:XP_006510843.1|dip:DIP-31054N|entrezgene/locuslink:11891(identity) refseq:NP_001076022.1|refseq:NP_001289727.1|refseq:NP_085031.3|ensembl:ENSMUSG00000024511(gene)|ensembl:ENSMUST00000069749(transcript)|ensembl:ENSMUST00000117692(transcript)|ensembl:ENSMUST00000121693(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030141"(secretory granule)|go:"GO:0030667"(secretory granule membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0032402"(melanosome transport)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0071985"(multivesicular body sorting pathway)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0099641"(anterograde axonal protein transport)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041837|rcsb pdb:2IEY|rcsb pdb:2IEZ|rcsb pdb:2IF0|rcsb pdb:2ZET|reactome:R-MMU-114608|reactome:R-MMU-8873719|reactome:R-MMU-8876198|dip:DIP-46237N|entrezgene/locuslink:80718(identity) - - - figure legend:"fig. 3E (VIII)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:IAq2IfXZTw2jSr+7LqNaJ03f/+g10090 rogid:R+P/aw+uO3tZcL5SFU6K0WwbOY410090 intact-crc:A05307B59C316B32|rigid:dTINWfi4+QKS1vOAFwE/sm6fCpY false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P53994 uniprotkb:P59279 intact:EBI-444664|uniprotkb:Q3UK45|ensembl:ENSMUSP00000057664 intact:EBI-11567554|uniprotkb:Q3TV67|ensembl:ENSMUSP00000022765|ensembl:ENSMUSP00000131145 psi-mi:rab2a_mouse(display_long)|uniprotkb:Rab2(gene name synonym)|uniprotkb:Rab2a(gene name)|psi-mi:Rab2a(display_short) psi-mi:rab2b_mouse(display_long)|uniprotkb:Rab2b(gene name)|psi-mi:Rab2b(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571673|imex:IM-24977-69 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_067493.1|ensembl:ENSMUSG00000047187(gene)|ensembl:ENSMUST00000060232(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007030"(Golgi organization)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019003"(GDP binding)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043025"(neuronal cell body)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P53994|reactome:R-MMU-162658|reactome:R-MMU-8873719|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|entrezgene/locuslink:59021(identity) refseq:NP_766189.1|ensembl:ENSMUSG00000022159(gene)|ensembl:ENSMUST00000022765(transcript)|ensembl:ENSMUST00000167116(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0098793"(presynapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8873719|entrezgene/locuslink:76338(identity) - - - figure legend:"fig. 3C (I)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:gBkMWVEMfkyF8vxEHTY8IM6VYAI10090 rogid:pTSmtuIPKapOSYFu6AT8mwYLlMk10090 intact-crc:E8DDB5F9A566993D|rigid:4CkfKCzg12rP6XgF+1pP5raQqGQ false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q921E2 uniprotkb:Q8BHH2 intact:EBI-8399593|uniprotkb:Q8BKP0|intact:MINT-4122479 intact:EBI-11568845|ensembl:ENSMUSP00000049739 psi-mi:rab31_mouse(display_long)|uniprotkb:Rab31(gene name)|psi-mi:Rab31(display_short) psi-mi:rab9b_mouse(display_long)|uniprotkb:Rab9b(gene name)|psi-mi:Rab9b(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571685|imex:IM-24977-70 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027417|refseq:NP_598446.2|mint:Q921E2|go:"GO:0001891"(phagocytic cup)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005769"(early endosome)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0031623"(receptor internalization)|go:"GO:0032588"(trans-Golgi network membrane)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048193"(Golgi vesicle transport)|go:"GO:0060100"(positive regulation of phagocytosis, engulfment)|go:"GO:0090382"(phagosome maturation)|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0036186"(early phagosome membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|entrezgene/locuslink:106572(identity) refseq:NP_795945.1|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|ensembl:ENSMUSG00000043463(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|ensembl:ENSMUST00000058814(transcript)|go:"GO:0019003"(GDP binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0045335"(phagocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041824|reactome:R-MMU-6798695|reactome:R-MMU-6811440|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-9706019|dip:DIP-61069N|entrezgene/locuslink:319642(identity) - comment:mint - figure legend:"fig. 3D (VI)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:DvaqDDmQHiSOMl40jbS/w3BOwnc10090 rogid:7w43PGrqcesZhOrWlLYfjmYygGg10090 intact-crc:36495D6325D00823|rigid:zeo3fvOdSkpJli9XE5kQz0ns9m0 false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q8QZZ8 uniprotkb:Q9CZE3 intact:EBI-1993463|uniprotkb:Q9D7E8|ensembl:ENSMUSP00000102877 intact:EBI-11566047|uniprotkb:Q3TXU7|uniprotkb:Q8BVD3|uniprotkb:Q91YN4|ensembl:ENSMUSP00000019974 psi-mi:rab38_mouse(display_long)|uniprotkb:Rab38(gene name)|psi-mi:Rab38(display_short) psi-mi:rab32_mouse(display_long)|uniprotkb:Rab32(gene name)|psi-mi:Rab32(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571697|imex:IM-24977-71 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_082514.4|dip:DIP-46949N|ensembl:ENSMUSG00000030559(gene)|ensembl:ENSMUST00000107256(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005764"(lysosome)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031982"(vesicle)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090383"(phagosome acidification)|go:"GO:1903232"(melanosome assembly)|go:"GO:2001247"(positive regulation of phosphatidylcholine biosynthetic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:72433(identity) refseq:NP_080681.1|ensembl:ENSMUSG00000019832(gene)|ensembl:ENSMUST00000019974(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0035646"(endosome to melanosome transport)|go:"GO:0035650"(AP-1 adaptor complex binding)|go:"GO:0035651"(AP-3 adaptor complex binding)|go:"GO:0036461"(BLOC-2 complex binding)|go:"GO:0042470"(melanosome)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:1903232"(melanosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR030697|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67844(identity) - - - figure legend:"fig. 3E (IX)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:mEIb8zWCeUffw/Ft9boPot7W5No10090 rogid:5t1h9JAnrJHXDzQPV9AzFqCGr6Y10090 intact-crc:7BD253464183EE99|rigid:pDnI5+HFTyNOsD5EhJmCSkHbntU false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P35293 uniprotkb:P97950 intact:EBI-8304813|ensembl:ENSMUSP00000157011|intact:MINT-1864434|uniprotkb:Q543V0 intact:EBI-11568468|ensembl:ENSMUSP00000033430 psi-mi:rab18_mouse(display_long)|uniprotkb:Rab18(gene name)|psi-mi:Rab18(display_short) psi-mi:rb33a_mouse(display_long)|uniprotkb:Rabs10(gene name synonym)|uniprotkb:Small GTP-binding protein S10(gene name synonym)|uniprotkb:Rab33a(gene name)|psi-mi:Rab33a(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571709|imex:IM-24977-72 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000073639(gene)|ensembl:ENSMUST00000234810(transcript)|go:"GO:0001654"(eye development)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007420"(brain development)|go:"GO:0012505"(endomembrane system)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019003"(GDP binding)|go:"GO:0034389"(lipid droplet organization)|go:"GO:0045202"(synapse)|go:"GO:0051170"(import into nucleus)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR025662|interpro:IPR027417|reactome:R-MMU-6798695|reactome:R-MMU-6811436|reactome:R-MMU-8873719|reactome:R-MMU-8876198|refseq:NP_851415.1|entrezgene/locuslink:19330(identity) refseq:NP_035358.1|ensembl:ENSMUSG00000031104(gene)|ensembl:ENSMUST00000033430(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0032482"(Rab protein signal transduction)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19337(identity) - function:Plays a role in apical endocytosis/recycling. May be implicated in transport between the plasma membrane and early endosomes|comment:mint|comment:homomint - figure legend:"fig. 3E (VII)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:GBb4x3HIoXCUA2ikZcE28uJtGGM10090 rogid:cGjViP75yHDHizE73L6ff3YBOBc10090 intact-crc:658F95A83740288E|rigid:vF2cuajwnuzN6FdM11uQvLkYcJw false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P35282 uniprotkb:P97950 intact:EBI-1993555|uniprotkb:Q7TPN7|ensembl:ENSMUSP00000020343 intact:EBI-11568468|ensembl:ENSMUSP00000033430 psi-mi:rab21_mouse(display_long)|uniprotkb:Rab21(gene name)|psi-mi:Rab21(display_short)|uniprotkb:Rab-12(gene name synonym) psi-mi:rb33a_mouse(display_long)|uniprotkb:Rabs10(gene name synonym)|uniprotkb:Small GTP-binding protein S10(gene name synonym)|uniprotkb:Rab33a(gene name)|psi-mi:Rab33a(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571721|imex:IM-24977-73 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_077774.1|ensembl:ENSMUSG00000020132(gene)|ensembl:ENSMUST00000020343(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0012506"(vesicle membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0030516"(regulation of axon extension)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0045202"(synapse)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0050775"(positive regulation of dendrite morphogenesis)|go:"GO:0050821"(protein stabilization)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000643"(positive regulation of early endosome to late endosome transport)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR020849|interpro:IPR027417|interpro:IPR041833|mint:P35282|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:216344(identity) refseq:NP_035358.1|ensembl:ENSMUSG00000031104(gene)|ensembl:ENSMUST00000033430(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0032482"(Rab protein signal transduction)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041822|reactome:R-MMU-8854214|reactome:R-MMU-8873719|entrezgene/locuslink:19337(identity) - - - figure legend:"fig. 3E (VII)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:LutxdtFI7bIYCtGadJaQ5DdohYY10090 rogid:cGjViP75yHDHizE73L6ff3YBOBc10090 intact-crc:300DF3E4EA712E6D|rigid:r9ubgbqFYLjMQrOxR1VjgtDfWZE false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q6PHN9 uniprotkb:P55258 intact:EBI-1373353|ensembl:ENSMUSP00000031492 intact:EBI-398411|uniprotkb:Q8VCF6|ensembl:ENSMUSP00000003121 psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:rab8a_mouse(display_long)|uniprotkb:Rab8a(gene name)|psi-mi:Rab8a(display_short)|uniprotkb:Mel(gene name synonym)|uniprotkb:Rab8(gene name synonym)|uniprotkb:Oncogene c-mel(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571733|imex:IM-24977-74 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) refseq:NP_075615.2|dip:DIP-31053N|ensembl:ENSMUSG00000003037(gene)|ensembl:ENSMUST00000003121(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0014069"(postsynaptic density)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0045202"(synapse)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097546"(ciliary base)|go:"GO:0097730"(non-motile cilium)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098969"(neurotransmitter receptor transport to postsynaptic membrane)|go:"GO:0099003"(vesicle-mediated transport in synapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P55258|rcsb pdb:2FU5|reactome:R-MMU-2565942|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0098978"(glutamatergic synapse)|entrezgene/locuslink:17274(identity) - - - figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 rogid:SE+1h+U6C8cAN2UTBIDapsUt4zA10090 intact-crc:52A9E448520578C8|rigid:XV08YaGZHc8FZzwoZjTjBnoNHi0 false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q6PHN9 uniprotkb:P61027 intact:EBI-1373353|ensembl:ENSMUSP00000031492 intact:EBI-911581|uniprotkb:O88386|uniprotkb:Q9D7X6|ensembl:ENSMUSP00000021001 psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:rab10_mouse(display_long)|uniprotkb:Rab10(gene name)|psi-mi:Rab10(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571745|imex:IM-24977-75 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) refseq:NP_057885.1|dip:DIP-37720N|ensembl:ENSMUSG00000020671(gene)|ensembl:ENSMUST00000021001(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030859"(polarized epithelial cell differentiation)|go:"GO:0031489"(myosin V binding)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045200"(establishment of neuroblast polarity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070382"(exocytic vesicle)|go:"GO:0071782"(endoplasmic reticulum tubular network)|go:"GO:0071786"(endoplasmic reticulum tubular network organization)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090150"(establishment of protein localization to membrane)|go:"GO:0097051"(establishment of protein localization to endoplasmic reticulum membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903361"(protein localization to basolateral plasma membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61027|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19325(identity) - - - figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 rogid:ZbfLtWtXl3z6/MYyhiZp6P1Y5tE10090 intact-crc:1E98803E8244B2E4|rigid:LS5eFp/svmT0TEwAEVEUsFrWvck false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9DD03 uniprotkb:Q6PHN9 intact:EBI-7528592|intact:MINT-1340848|ensembl:ENSMUSP00000070588 intact:EBI-1373353|ensembl:ENSMUSP00000031492 psi-mi:rab13_mouse(display_long)|uniprotkb:Rab13(gene name)|psi-mi:Rab13(display_short) psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571769|imex:IM-24977-77 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_080953.1|ensembl:ENSMUSG00000027935(gene)|ensembl:ENSMUST00000065418(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010737"(protein kinase A signaling)|go:"GO:0016197"(endosomal transport)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0031175"(neuron projection development)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035767"(endothelial cell chemotaxis)|go:"GO:0043005"(neuron projection)|go:"GO:0044795"(trans-Golgi network to recycling endosome transport)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0070830"(bicellular tight junction assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097368"(establishment of Sertoli cell barrier)|go:"GO:1902463"(protein localization to cell leading edge)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9DD03|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0032456"(endocytic recycling)|entrezgene/locuslink:68328(identity) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) - function:Could participate in polarized transport, in the assembly and/or the activity of tight junctions|comment:mint - figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:vFVG2hj2wT1UcE0LSh12mVhYd+010090 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 intact-crc:319E15D2CCC323C1|rigid:4mLqIBnh5dnZGV/XI0pa6/WHUnQ false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P61028 uniprotkb:Q6PHN9 intact:EBI-911674|ensembl:ENSMUSP00000041857|uniprotkb:Q3U1Z3 intact:EBI-1373353|ensembl:ENSMUSP00000031492 psi-mi:rab8b_mouse(display_long)|uniprotkb:Rab8b(gene name)|psi-mi:Rab8b(display_short) psi-mi:rab35_mouse(display_long)|uniprotkb:Rab35(gene name)|psi-mi:Rab35(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571757|imex:IM-24977-76 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_775589.1|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098793"(presynapse)|go:"GO:0150115"(cell-substrate junction organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|ensembl:ENSMUSG00000036943(gene)|ensembl:ENSMUST00000041139(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016604"(nuclear body)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031346"(positive regulation of cell projection organization)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045046"(protein import into peroxisome membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051286"(cell tip)|go:"GO:0051461"(positive regulation of corticotropin secretion)|entrezgene/locuslink:235442(identity) refseq:NP_937806.1|dip:DIP-38238N|ensembl:ENSMUSG00000029518(gene)|ensembl:ENSMUST00000031492(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0008104"(protein localization)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016197"(endosomal transport)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0031175"(neuron projection development)|go:"GO:0031253"(cell projection membrane)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0036010"(protein localization to endosome)|go:"GO:0042470"(melanosome)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045334"(clathrin-coated endocytic vesicle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041815|mint:Q6PHN9|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:77407(identity) - - - figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:bRfYongYDkw/3XyTJ8jMVUZ001E10090 rogid:95pH+DyDjv9FcxFeMmGYoJ0KyPo10090 intact-crc:32218FC1A731FBB9|rigid:tlM1vf+/Ed/W6AJnbx+KZlf0IZs false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P63011 uniprotkb:P62821 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571793|imex:IM-24977-79 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) - - - figure legend:"fig. 3C (III)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 intact-crc:3727070A8220D267|rigid:ZQFd/T+aBKzj/ifgSKQhnMD66X8 false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P62821 uniprotkb:Q8BHC1 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-10767682|uniprotkb:Q3TUJ3|ensembl:ENSMUSP00000033545 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:rb39b_mouse(display_long)|uniprotkb:Rab39b(gene name)|psi-mi:Rab39b(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571781|imex:IM-24977-78 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_780331.1|ensembl:ENSMUSG00000031202(gene)|ensembl:ENSMUST00000033545(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006914"(autophagy)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0043005"(neuron projection)|go:"GO:0050808"(synapse organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041818|mint:Q8BHC1|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:67790(identity) - - - figure legend:"fig. 3C (III)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:yAgR+bATJvGN1eFagBTQAWV4ync10090 intact-crc:FD28716909B03EA6|rigid:SXDi990Rdn9QdofHXjnWWAp06h4 false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P63011 uniprotkb:Q9CZT8 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-911649|uniprotkb:Q80WV9|ensembl:ENSMUSP00000003502|ensembl:ENSMUSP00000102261|uniprotkb:Q920F1 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:rab3b_mouse(display_long)|uniprotkb:Rab3b(gene name)|psi-mi:Rab3b(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571817|imex:IM-24977-81 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) ensembl:ENSMUSG00000003411(gene)|ensembl:ENSMUST00000003502(transcript)|ensembl:ENSMUST00000106650(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051586"(positive regulation of dopamine uptake involved in synaptic transmission)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097494"(regulation of vesicle size)|go:"GO:0098691"(dopaminergic synapse)|go:"GO:0098693"(regulation of synaptic vesicle cycle)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:Q9CZT8|reactome:R-MMU-8873719|refseq:NP_076026.1|entrezgene/locuslink:69908(identity) - - - figure legend:"fig. 3C (III)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:4WkkwI5ty+Y60GheT3a0s2RVr2Q10090 intact-crc:507FD32DFDE0D95D|rigid:3PTMsw/EQ1aMdORBx+bc6NNTKU4 false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P62821 uniprotkb:Q9CZT8 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-911649|uniprotkb:Q80WV9|ensembl:ENSMUSP00000003502|ensembl:ENSMUSP00000102261|uniprotkb:Q920F1 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:rab3b_mouse(display_long)|uniprotkb:Rab3b(gene name)|psi-mi:Rab3b(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571805|imex:IM-24977-80 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) ensembl:ENSMUSG00000003411(gene)|ensembl:ENSMUST00000003502(transcript)|ensembl:ENSMUST00000106650(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051586"(positive regulation of dopamine uptake involved in synaptic transmission)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097494"(regulation of vesicle size)|go:"GO:0098691"(dopaminergic synapse)|go:"GO:0098693"(regulation of synaptic vesicle cycle)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:Q9CZT8|reactome:R-MMU-8873719|refseq:NP_076026.1|entrezgene/locuslink:69908(identity) - - - figure legend:"fig. 3C (III)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:4WkkwI5ty+Y60GheT3a0s2RVr2Q10090 intact-crc:D9F46797B86C7349|rigid:4kKz+6pVUVeTwk/doYj54NFwTtY false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P62821 uniprotkb:P62823 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571829|imex:IM-24977-82 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) - - - figure legend:"fig. 3C (III)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 intact-crc:A12D4E37A15EB57B|rigid:7CznH//BFPb9/7RvH/GB92GgF+s false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P63011 uniprotkb:P35276 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571853|imex:IM-24977-84 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) - - - figure legend:"fig. 3C (III)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 intact-crc:48049FB9EC348274|rigid:hgc0ITJbA9261FbzNnjwJMvxWSA false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P62823 uniprotkb:P63011 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571841|imex:IM-24977-83 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) - - - figure legend:"fig. 3C (III)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 intact-crc:418A4D6FDE44A6CC|rigid:/m112ezKbWhEK0frp5qRzhNLaY4 false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q8VHQ4 uniprotkb:Q8VHP8 intact:EBI-7893708|intact:UNK-5527842|ensembl:ENSMUSP00000026826|ensembl:ENSMUSP00000127546|ensembl:ENSMUSP00000136612 intact:EBI-2323063 psi-mi:rb40c_mouse(display_long)|uniprotkb:Rab40c(gene name)|psi-mi:Rab40c(display_short)|uniprotkb:SOCS box-containing protein RAR3(gene name synonym) psi-mi:rb40b_mouse(display_long)|uniprotkb:Rab40b(gene name)|psi-mi:Rab40b(display_short)|uniprotkb:SOCS box-containing protein RAR(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571877|imex:IM-24977-86 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_631893.1|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR001496(SOCS protein, C-terminal)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR036036|mint:Q8VHQ4|reactome:R-MMU-8873719|go:"GO:0003924"(GTPase activity)|ensembl:ENSMUSG00000025730(gene)|ensembl:ENSMUST00000026826(transcript)|ensembl:ENSMUST00000167626(transcript)|ensembl:ENSMUST00000179998(transcript)|entrezgene/locuslink:224624(identity) interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|interpro:IPR001496(SOCS protein, C-terminal)|mint:Q8VHP8|interpro:IPR027417|interpro:IPR036036|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901998"(toxin transport)|reactome:R-MMU-8873719|entrezgene/locuslink:217371(identity) - comment:mint|function:"Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins" - figure legend:"fig. 3C (X)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:ZYZSo//vNrfsDcxrri79hvRkVEo10090 rogid:ZdvL4gvLKKn0kFOkbLVbYwsTA2I10090 intact-crc:D064FD1E237288AE|rigid:vxbbWzFfhXuhGeo859LV0mB94n8 false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P62823 uniprotkb:P35276 intact:EBI-4286215|uniprotkb:Q62858|uniprotkb:Q62974|uniprotkb:Q63482|uniprotkb:Q9CXQ1|ensembl:ENSMUSP00000132945 intact:EBI-911664|ensembl:ENSMUSP00000111008|ensembl:ENSMUSP00000113322 psi-mi:rab3c_mouse(display_long)|uniprotkb:Rab3c(gene name)|psi-mi:Rab3c(display_short) psi-mi:rab3d_mouse(display_long)|uniprotkb:Rab3d(gene name)|psi-mi:Rab3d(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571865|imex:IM-24977-85 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_076341.1|ensembl:ENSMUSG00000021700(gene)|ensembl:ENSMUST00000167824(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031982"(vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|reactome:R-MMU-8873719|entrezgene/locuslink:67295(identity) mint:P35276|reactome:R-MMU-6798695|reactome:R-MMU-8873719|ensembl:ENSMUSG00000019066(gene)|ensembl:ENSMUST00000115351(transcript)|ensembl:ENSMUST00000122211(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0018125"(peptidyl-cysteine methylation)|go:"GO:0030133"(transport vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0042588"(zymogen granule)|go:"GO:0045453"(bone resorption)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0099503"(secretory vesicle)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|refseq:NP_001311460.1|refseq:NP_114080.2|refseq:XP_011240724.1|refseq:XP_011240725.1|entrezgene/locuslink:19340(identity) - - - figure legend:"fig. 3C (III)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:F0BXS2E7Unlk+uNhGFX8SXRN9hA10090 rogid:W04bs8z79XFnuP9EHr06Cq4WiTc10090 intact-crc:ED97AC62D3796F93|rigid:lRE71pvzZNA5JGCvqDjm4sGIl4E false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q91ZR1 uniprotkb:P62821 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-1634955|uniprotkb:P11476|uniprotkb:Q3TX44|uniprotkb:Q811M4|uniprotkb:Q96N61|uniprotkb:Q9Y3T2|ensembl:ENSMUSP00000127330 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:rab1a_mouse(display_long)|uniprotkb:Rab1A(gene name)|psi-mi:Rab1A(display_short)|uniprotkb:Rab1(gene name synonym)|uniprotkb:YPT1-related protein(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571889|imex:IM-24977-87 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_033022.1|ensembl:ENSMUSG00000020149(gene)|ensembl:ENSMUST00000163483(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007030"(Golgi organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0016477"(cell migration)|go:"GO:0019068"(virion assembly)|go:"GO:0030252"(growth hormone secretion)|go:"GO:0032402"(melanosome transport)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0042470"(melanosome)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0043025"(neuronal cell body)|go:"GO:0047496"(vesicle transport along microtubule)|go:"GO:0090110"(COPII-coated vesicle cargo loading)|go:"GO:0098793"(presynapse)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P62821|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19324(identity) - - - figure legend:"fig. 3C (III)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:Pa9NYKiCNXtxRwthh1r/pGbZyf010090 intact-crc:0098BE3824017DE5|rigid:bSEIFCNwdvrXL3nfPvqtQpnCfBs false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q91ZR1 uniprotkb:P63011 intact:EBI-11565983|ensembl:ENSMUSP00000090727 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 psi-mi:rab4b_mouse(display_long)|uniprotkb:Rab4b(gene name)|psi-mi:Rab4b(display_short)|uniprotkb:Rab4(gene name synonym) psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571901|imex:IM-24977-88 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083667.1|ensembl:ENSMUSG00000053291(gene)|ensembl:ENSMUST00000093040(transcript)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032593"(insulin-responsive compartment)|go:"GO:0046323"(glucose import)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0055037"(recycling endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041819|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8875656|entrezgene/locuslink:19342(identity) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590|entrezgene/locuslink:19339(identity) - - - figure legend:"fig. 3C (III)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/09 rogid:UKZcIB2PBBDeHeEPVuv9UyvV6wI10090 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 intact-crc:AE113C0410F9749A|rigid:KnJFq2c3saKeqwEF0AnvmlPANTY false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q64008 uniprotkb:Q9CQD1 intact:EBI-9986497|uniprotkb:Q8BHJ0|uniprotkb:Q99P59|uniprotkb:Q99P90 intact:EBI-647712|uniprotkb:Q9DCN5|uniprotkb:Q3UCX7|uniprotkb:Q4VAA1|ensembl:ENSMUSP00000017975 psi-mi:rab34_mouse(display_long)|uniprotkb:Rab34(gene name)|psi-mi:Rab34(display_short)|uniprotkb:Rab39(gene name synonym)|uniprotkb:Rah(gene name synonym)|uniprotkb:Rah1(gene name synonym)|uniprotkb:Ras-related homolog(gene name synonym)|uniprotkb:Ras-related protein Rab-39(gene name synonym)|uniprotkb:Ras-related protein Rah(gene name synonym) psi-mi:rab5a_mouse(display_long)|uniprotkb:Rab5a(gene name)|psi-mi:Rab5a(display_short)|uniprotkb:nnyRab5a(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571913|imex:IM-24977-89 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) reactome:R-MMU-8873719|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0005929"(cilium)|go:"GO:0006897"(endocytosis)|go:"GO:0007041"(lysosomal transport)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030030"(cell projection organization)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031982"(vesicle)|go:"GO:0031985"(Golgi cisterna)|go:"GO:0032418"(lysosome localization)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045880"(positive regulation of smoothened signaling pathway)|go:"GO:0005770"(late endosome)|go:"GO:0050714"(positive regulation of protein secretion)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:0090385"(phagosome-lysosome fusion)|go:"GO:1900426"(positive regulation of defense response to bacterium)|go:"GO:1905171"(positive regulation of protein localization to phagocytic vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR027417|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|refseq:NP_001152954.1|refseq:NP_258436.2|entrezgene/locuslink:19376(identity) refseq:NP_080163.1|ensembl:ENSMUSG00000017831(gene)|ensembl:ENSMUST00000017975(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006909"(phagocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032009"(early phagosome)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043679"(axon terminus)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045121"(membrane raft)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:0098842"(postsynaptic early endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000286"(receptor internalization involved in canonical Wnt signaling pathway)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-1660499|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-983231|go:"GO:0008021"(synaptic vesicle)|entrezgene/locuslink:271457(identity) - - - figure legend:"fig. 3D (V)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:BBB9N/zuCY5aiJ1YDRDJLFB8mgQ10090 rogid:TleQFpdeUdtlHFp7sMsgWpx6p8E10090 intact-crc:F815E73E31FD7D7A|rigid:szAH8L+RYLvtWMJTdGFKhxFpCtw false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P61021 uniprotkb:Q64008 intact:EBI-8320093|intact:MINT-1865771|uniprotkb:P35239|uniprotkb:P35277|ensembl:ENSMUSP00000000727 intact:EBI-9986497|uniprotkb:Q8BHJ0|uniprotkb:Q99P59|uniprotkb:Q99P90 psi-mi:rab5b_mouse(display_long)|uniprotkb:Rab5b(gene name)|psi-mi:Rab5b(display_short) psi-mi:rab34_mouse(display_long)|uniprotkb:Rab34(gene name)|psi-mi:Rab34(display_short)|uniprotkb:Rab39(gene name synonym)|uniprotkb:Rah(gene name synonym)|uniprotkb:Rah1(gene name synonym)|uniprotkb:Ras-related homolog(gene name synonym)|uniprotkb:Ras-related protein Rab-39(gene name synonym)|uniprotkb:Ras-related protein Rah(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571925|imex:IM-24977-90 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_803130.1|refseq:XP_006513447.1|ensembl:ENSMUSG00000000711(gene)|ensembl:ENSMUST00000000727(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61021|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19344(identity) reactome:R-MMU-8873719|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0005929"(cilium)|go:"GO:0006897"(endocytosis)|go:"GO:0007041"(lysosomal transport)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030030"(cell projection organization)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031982"(vesicle)|go:"GO:0031985"(Golgi cisterna)|go:"GO:0032418"(lysosome localization)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045880"(positive regulation of smoothened signaling pathway)|go:"GO:0005770"(late endosome)|go:"GO:0050714"(positive regulation of protein secretion)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:0090385"(phagosome-lysosome fusion)|go:"GO:1900426"(positive regulation of defense response to bacterium)|go:"GO:1905171"(positive regulation of protein localization to phagocytic vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR027417|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|refseq:NP_001152954.1|refseq:NP_258436.2|entrezgene/locuslink:19376(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic - figure legend:"fig. 3D (V)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:jm+x3SYDL+i+/BrDFnp44kxlHUM10090 rogid:BBB9N/zuCY5aiJ1YDRDJLFB8mgQ10090 intact-crc:8A68A293DAD17083|rigid:hcuRlLnThZZVgVKJtrEocXpWRuU false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P61021 uniprotkb:Q9CQD1 intact:EBI-8320093|intact:MINT-1865771|uniprotkb:P35239|uniprotkb:P35277|ensembl:ENSMUSP00000000727 intact:EBI-647712|uniprotkb:Q9DCN5|uniprotkb:Q3UCX7|uniprotkb:Q4VAA1|ensembl:ENSMUSP00000017975 psi-mi:rab5b_mouse(display_long)|uniprotkb:Rab5b(gene name)|psi-mi:Rab5b(display_short) psi-mi:rab5a_mouse(display_long)|uniprotkb:Rab5a(gene name)|psi-mi:Rab5a(display_short)|uniprotkb:nnyRab5a(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571937|imex:IM-24977-91 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_803130.1|refseq:XP_006513447.1|ensembl:ENSMUSG00000000711(gene)|ensembl:ENSMUST00000000727(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61021|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19344(identity) refseq:NP_080163.1|ensembl:ENSMUSG00000017831(gene)|ensembl:ENSMUST00000017975(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006909"(phagocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032009"(early phagosome)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043679"(axon terminus)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045121"(membrane raft)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:0098842"(postsynaptic early endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000286"(receptor internalization involved in canonical Wnt signaling pathway)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-1660499|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-983231|go:"GO:0008021"(synaptic vesicle)|entrezgene/locuslink:271457(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic - figure legend:"fig. 3D (V)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:jm+x3SYDL+i+/BrDFnp44kxlHUM10090 rogid:TleQFpdeUdtlHFp7sMsgWpx6p8E10090 intact-crc:E95B9505F664825F|rigid:jUCi+icUDgxwZMDbrMdNNprP0ho false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q64008 uniprotkb:P35278 intact:EBI-9986497|uniprotkb:Q8BHJ0|uniprotkb:Q99P59|uniprotkb:Q99P90 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 psi-mi:rab34_mouse(display_long)|uniprotkb:Rab34(gene name)|psi-mi:Rab34(display_short)|uniprotkb:Rab39(gene name synonym)|uniprotkb:Rah(gene name synonym)|uniprotkb:Rah1(gene name synonym)|uniprotkb:Ras-related homolog(gene name synonym)|uniprotkb:Ras-related protein Rab-39(gene name synonym)|uniprotkb:Ras-related protein Rah(gene name synonym) psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571949|imex:IM-24977-92 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) reactome:R-MMU-8873719|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005769"(early endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005795"(Golgi stack)|go:"GO:0005929"(cilium)|go:"GO:0006897"(endocytosis)|go:"GO:0007041"(lysosomal transport)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030030"(cell projection organization)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031982"(vesicle)|go:"GO:0031985"(Golgi cisterna)|go:"GO:0032418"(lysosome localization)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045880"(positive regulation of smoothened signaling pathway)|go:"GO:0005770"(late endosome)|go:"GO:0050714"(positive regulation of protein secretion)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0090382"(phagosome maturation)|go:"GO:0090385"(phagosome-lysosome fusion)|go:"GO:1900426"(positive regulation of defense response to bacterium)|go:"GO:1905171"(positive regulation of protein localization to phagocytic vesicle)|go:"GO:0048471"(perinuclear region of cytoplasm)|interpro:IPR027417|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR001806(Ras GTPase)|refseq:NP_001152954.1|refseq:NP_258436.2|entrezgene/locuslink:19376(identity) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) - - - figure legend:"fig. 3D (V)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:BBB9N/zuCY5aiJ1YDRDJLFB8mgQ10090 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 intact-crc:9BC58D92EEFD0EF7|rigid:LWqg6snLLkH8hVM9F7h/jqR+Wmw false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P35278 uniprotkb:Q9CQD1 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 intact:EBI-647712|uniprotkb:Q9DCN5|uniprotkb:Q3UCX7|uniprotkb:Q4VAA1|ensembl:ENSMUSP00000017975 psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:rab5a_mouse(display_long)|uniprotkb:Rab5a(gene name)|psi-mi:Rab5a(display_short)|uniprotkb:nnyRab5a(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571961|imex:IM-24977-93 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) refseq:NP_080163.1|ensembl:ENSMUSG00000017831(gene)|ensembl:ENSMUST00000017975(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006909"(phagocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0010008"(endosome membrane)|go:"GO:0012505"(endomembrane system)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019001"(guanyl nucleotide binding)|go:"GO:0019003"(GDP binding)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032009"(early phagosome)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:0042470"(melanosome)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043679"(axon terminus)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045121"(membrane raft)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0055037"(recycling endosome)|go:"GO:0098559"(cytoplasmic side of early endosome membrane)|go:"GO:0098842"(postsynaptic early endosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0150093"(amyloid-beta clearance by transcytosis)|go:"GO:2000286"(receptor internalization involved in canonical Wnt signaling pathway)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-1660499|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-983231|go:"GO:0008021"(synaptic vesicle)|entrezgene/locuslink:271457(identity) - - - figure legend:"fig. 3D (V)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 rogid:TleQFpdeUdtlHFp7sMsgWpx6p8E10090 intact-crc:BE2F934359B9C663|rigid:JCoc6YA7Eb0Meffa1Al+besLDWU false red fluorescent protein tag:?-? enhanced yellow fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P61021 uniprotkb:P35278 intact:EBI-8320093|intact:MINT-1865771|uniprotkb:P35239|uniprotkb:P35277|ensembl:ENSMUSP00000000727 intact:EBI-2551532|ensembl:ENSMUSP00000102987|uniprotkb:Q8R2N8|uniprotkb:Q8R1V8 psi-mi:rab5b_mouse(display_long)|uniprotkb:Rab5b(gene name)|psi-mi:Rab5b(display_short) psi-mi:rab5c_mouse(display_long)|uniprotkb:Rab5c(gene name)|psi-mi:Rab5c(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571973|imex:IM-24977-94 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_803130.1|refseq:XP_006513447.1|ensembl:ENSMUSG00000000711(gene)|ensembl:ENSMUST00000000727(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P61021|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19344(identity) ensembl:ENSMUSG00000019173(gene)|ensembl:ENSMUST00000107364(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006897"(endocytosis)|go:"GO:0007032"(endosome organization)|go:"GO:0012505"(endomembrane system)|go:"GO:0030100"(regulation of endocytosis)|go:"GO:0030139"(endocytic vesicle)|go:"GO:0031901"(early endosome membrane)|go:"GO:0042470"(melanosome)|go:"GO:0048227"(plasma membrane to endosome transport)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:1HUQ|rcsb pdb:1Z07|rcsb pdb:1Z0D|reactome:R-MMU-432722|reactome:R-MMU-6798695|reactome:R-MMU-8856828|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0019003"(GDP binding)|refseq:NP_077776.2|dip:DIP-56521N|entrezgene/locuslink:19345(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic - figure legend:"fig. 3D (V)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:jm+x3SYDL+i+/BrDFnp44kxlHUM10090 rogid:+RBgzzjAJ3ddDtcAq0IDIzHekYE10090 intact-crc:65A55EE8DF1B5FC1|rigid:kJYxZM1UFMAbvO7ZfUl9VCg8IuI false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9D1G1 uniprotkb:P61028 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-911674|ensembl:ENSMUSP00000041857|uniprotkb:Q3U1Z3 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:rab8b_mouse(display_long)|uniprotkb:Rab8b(gene name)|psi-mi:Rab8b(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571997|imex:IM-24977-96 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_775589.1|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098793"(presynapse)|go:"GO:0150115"(cell-substrate junction organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|ensembl:ENSMUSG00000036943(gene)|ensembl:ENSMUST00000041139(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016604"(nuclear body)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031346"(positive regulation of cell projection organization)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045046"(protein import into peroxisome membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051286"(cell tip)|go:"GO:0051461"(positive regulation of corticotropin secretion)|entrezgene/locuslink:235442(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic - figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:bRfYongYDkw/3XyTJ8jMVUZ001E10090 intact-crc:0743A0E14EB1E131|rigid:ZVsuPPKYGVvJHNzBePQ12ZHjpc4 false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9D1G1 uniprotkb:P55258 intact:EBI-8319000|uniprotkb:Q3U0N1|intact:MINT-1865627|ensembl:ENSMUSP00000025804 intact:EBI-398411|uniprotkb:Q8VCF6|ensembl:ENSMUSP00000003121 psi-mi:rab1b_mouse(display_long)|uniprotkb:Rab1b(gene name)|psi-mi:Rab1b(display_short) psi-mi:rab8a_mouse(display_long)|uniprotkb:Rab8a(gene name)|psi-mi:Rab8a(display_short)|uniprotkb:Mel(gene name synonym)|uniprotkb:Rab8(gene name synonym)|uniprotkb:Oncogene c-mel(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11571985|imex:IM-24977-95 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_083852.1|ensembl:ENSMUSG00000024870(gene)|ensembl:ENSMUST00000025804(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0012505"(endomembrane system)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:1903020"(positive regulation of glycoprotein metabolic process)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:Q9D1G1|reactome:R-MMU-162658|reactome:R-MMU-204005|reactome:R-MMU-6807878|reactome:R-MMU-6811434|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:76308(identity) refseq:NP_075615.2|dip:DIP-31053N|ensembl:ENSMUSG00000003037(gene)|ensembl:ENSMUST00000003121(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0014069"(postsynaptic density)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0045202"(synapse)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097546"(ciliary base)|go:"GO:0097730"(non-motile cilium)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098969"(neurotransmitter receptor transport to postsynaptic membrane)|go:"GO:0099003"(vesicle-mediated transport in synapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P55258|rcsb pdb:2FU5|reactome:R-MMU-2565942|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0098978"(glutamatergic synapse)|entrezgene/locuslink:17274(identity) - comment:mint|function:Protein transport. Probably involved in vesicular traffic - figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:Lyjkc4ttyNLU6U0vbVuQx+7141w10090 rogid:SE+1h+U6C8cAN2UTBIDapsUt4zA10090 intact-crc:1098CB6EB4031E8A|rigid:iU4Off95t20CP6qN68uEbkmHn+w false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P51150 uniprotkb:Q8BHH2 intact:EBI-8321380|intact:MINT-1864693|ensembl:ENSMUSP00000092658|ensembl:ENSMUSP00000109226|ensembl:ENSMUSP00000109227|ensembl:ENSMUSP00000109228|ensembl:ENSMUSP00000109230 intact:EBI-11568845|ensembl:ENSMUSP00000049739 psi-mi:rab7a_mouse(display_long)|uniprotkb:Rab7a(gene name)|psi-mi:Rab7a(display_short)|uniprotkb:Rab7(gene name synonym) psi-mi:rab9b_mouse(display_long)|uniprotkb:Rab9b(gene name)|psi-mi:Rab9b(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11572021|imex:IM-24977-98 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001280581.1|refseq:NP_001280582.1|refseq:NP_001280583.1|refseq:NP_001280584.1|refseq:NP_033031.2|dip:DIP-60513N|reactome:R-MMU-9013149|reactome:R-MMU-9013404|reactome:R-MMU-9013405|reactome:R-MMU-9013406|reactome:R-MMU-9013407|reactome:R-MMU-9013408|reactome:R-MMU-9013423|reactome:R-MMU-9035034|reactome:R-MMU-9013148|ensembl:ENSMUSG00000079477(gene)|ensembl:ENSMUST00000095048(transcript)|ensembl:ENSMUST00000113596(transcript)|ensembl:ENSMUST00000113597(transcript)|ensembl:ENSMUST00000113598(transcript)|ensembl:ENSMUST00000113600(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0003925"(G protein activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005829"(cytosol)|go:"GO:0006622"(protein targeting to lysosome)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007174"(epidermal growth factor catabolic process)|go:"GO:0008333"(endosome to lysosome transport)|go:"GO:0010008"(endosome membrane)|go:"GO:0016042"(lipid catabolic process)|go:"GO:0019003"(GDP binding)|go:"GO:0019076"(viral release from host cell)|go:"GO:0022615"(protein to membrane docking)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031902"(late endosome membrane)|go:"GO:0032419"(extrinsic component of lysosome membrane)|go:"GO:0033162"(melanosome membrane)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045022"(early endosome to late endosome transport)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045453"(bone resorption)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0048524"(positive regulation of viral process)|go:"GO:0051650"(establishment of vesicle localization)|go:"GO:0061724"(lipophagy)|go:"GO:0090383"(phagosome acidification)|go:"GO:0090385"(phagosome-lysosome fusion)|go:"GO:0097208"(alveolar lamellar body)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:0099638"(endosome to plasma membrane protein transport)|go:"GO:1903542"(negative regulation of exosomal secretion)|go:"GO:1903543"(positive regulation of exosomal secretion)|go:"GO:1905394"(retromer complex binding)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P51150|rcsb pdb:5Z2M|reactome:R-MMU-2132295|reactome:R-MMU-6798695|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|entrezgene/locuslink:19349(identity) refseq:NP_795945.1|go:"GO:0005764"(lysosome)|go:"GO:0005770"(late endosome)|go:"GO:0005829"(cytosol)|ensembl:ENSMUSG00000043463(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0015031"(protein transport)|ensembl:ENSMUST00000058814(transcript)|go:"GO:0019003"(GDP binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0045335"(phagocytic vesicle)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR041824|reactome:R-MMU-6798695|reactome:R-MMU-6811440|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-9706019|dip:DIP-61069N|entrezgene/locuslink:319642(identity) - comment:mint|function:"Involved in late endocytic transport. Contributes to the maturation of phagosomes (acidification)" - figure legend:"fig. 3D (VI)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:AJbKizzw4zCAn+roRF2Im1Tt4xE10090 rogid:7w43PGrqcesZhOrWlLYfjmYygGg10090 intact-crc:23711D21B8D0E438|rigid:iKVoetW/3YsQwrvbUsDmbgWI34Q false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:P55258 uniprotkb:P61028 intact:EBI-398411|uniprotkb:Q8VCF6|ensembl:ENSMUSP00000003121 intact:EBI-911674|ensembl:ENSMUSP00000041857|uniprotkb:Q3U1Z3 psi-mi:rab8a_mouse(display_long)|uniprotkb:Rab8a(gene name)|psi-mi:Rab8a(display_short)|uniprotkb:Mel(gene name synonym)|uniprotkb:Rab8(gene name synonym)|uniprotkb:Oncogene c-mel(gene name synonym) psi-mi:rab8b_mouse(display_long)|uniprotkb:Rab8b(gene name)|psi-mi:Rab8b(display_short) psi-mi:"MI:0663"(confocal microscopy) Li et al. (2016) pubmed:26885862|imex:IM-24977 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11572009|imex:IM-24977-97 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_075615.2|dip:DIP-31053N|ensembl:ENSMUSG00000003037(gene)|ensembl:ENSMUST00000003121(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005886"(plasma membrane)|go:"GO:0005929"(cilium)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0006914"(autophagy)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0014069"(postsynaptic density)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030425"(dendrite)|go:"GO:0030496"(midbody)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031489"(myosin V binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0045202"(synapse)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0051223"(regulation of protein transport)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060271"(cilium assembly)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097546"(ciliary base)|go:"GO:0097730"(non-motile cilium)|go:"GO:0098887"(neurotransmitter receptor transport, endosome to postsynaptic membrane)|go:"GO:0098969"(neurotransmitter receptor transport to postsynaptic membrane)|go:"GO:0099003"(vesicle-mediated transport in synapse)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|mint:P55258|rcsb pdb:2FU5|reactome:R-MMU-2565942|reactome:R-MMU-5620912|reactome:R-MMU-5620916|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|go:"GO:0098978"(glutamatergic synapse)|entrezgene/locuslink:17274(identity) refseq:NP_775589.1|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0098793"(presynapse)|go:"GO:0150115"(cell-substrate junction organization)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|reactome:R-MMU-8854214|reactome:R-MMU-8873719|reactome:R-MMU-8876198|ensembl:ENSMUSG00000036943(gene)|ensembl:ENSMUST00000041139(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005768"(endosome)|go:"GO:0005778"(peroxisomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0009306"(protein secretion)|go:"GO:0016604"(nuclear body)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019003"(GDP binding)|go:"GO:0019882"(antigen processing and presentation)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0030911"(TPR domain binding)|go:"GO:0031346"(positive regulation of cell projection organization)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0045046"(protein import into peroxisome membrane)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0048210"(Golgi vesicle fusion to target membrane)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051286"(cell tip)|go:"GO:0051461"(positive regulation of corticotropin secretion)|entrezgene/locuslink:235442(identity) - - - figure legend:"fig. 3C (II)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-dc2.4)|taxid:10090(mouse-dc2.4 dendritic cell line) - 2016/01/25 2016/02/10 rogid:SE+1h+U6C8cAN2UTBIDapsUt4zA10090 rogid:bRfYongYDkw/3XyTJ8jMVUZ001E10090 intact-crc:397380DB2DBA0E4A|rigid:C1Vhm8unFK23PSEmVfEr4DKGHAQ false enhanced yellow fluorescent protein tag:?-? red fluorescent protein tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence)