#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:A0A140N890 uniprotkb:A0A140N890 intact:EBI-11476557 intact:EBI-11476557 psi-mi:ygea_ecobd(display_long)|uniprotkb:ygeA(gene name)|psi-mi:ygeA(display_short)|uniprotkb:EcL-DER(gene name synonym)|uniprotkb:ECBD_0884(locus name) psi-mi:ygea_ecobd(display_long)|uniprotkb:ygeA(gene name)|psi-mi:ygeA(display_short)|uniprotkb:EcL-DER(gene name synonym)|uniprotkb:ECBD_0884(locus name) psi-mi:"MI:0114"(x-ray crystallography) Ahn et al. (2015) imex:IM-24914|pubmed:26555188 taxid:469008(ecobd)|taxid:469008("Escherichia coli (strain B / BL21-DE3)") taxid:469008(ecobd)|taxid:469008("Escherichia coli (strain B / BL21-DE3)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0471"(MINT) intact:EBI-11476890|imex:IM-24914-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:C6EJ28(uniprot-removed-ac)|interpro:IPR001920(Asp/Glu racemase)|interpro:IPR004380(Aspartate racemase)|interpro:IPR015942(Asp/Glu/hydantoin racemase)|interpro:IPR018187|interpro:IPR033134|refseq:WP_000848664.1|go:"GO:0006807"(nitrogen compound metabolic process)|go:"GO:0008881"(glutamate racemase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0047689"(aspartate racemase activity)|rcsb pdb:5ELL|rcsb pdb:5ELM uniprotkb:C6EJ28(uniprot-removed-ac)|interpro:IPR001920(Asp/Glu racemase)|interpro:IPR004380(Aspartate racemase)|interpro:IPR015942(Asp/Glu/hydantoin racemase)|interpro:IPR018187|interpro:IPR033134|refseq:WP_000848664.1|go:"GO:0006807"(nitrogen compound metabolic process)|go:"GO:0008881"(glutamate racemase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0047689"(aspartate racemase activity)|rcsb pdb:5ELL|rcsb pdb:5ELM - - - figure legend:t1 f1b|comment:"In order to elucidate the function and substrate specificity of the gene product of B21_02649 from E. coli, we determined a crystal structure of B21_02649 at a resolution of 1.8 Å. The crystal belonged to C2221, and an asymmetric unit of structure contains two molecules (Fig. 1A and B). This suggests that the protein functions as a dimer, which is consistent with size-exclusion chromatography results (Fig. 1C)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2016/01/11 2016/01/17 rogid:YC1rGjodIU38/PDkW+HRi58kK6I469008 rogid:YC1rGjodIU38/PDkW+HRi58kK6I469008 rigid:FBB/ZwZkqtYHmGmBauRreK4XLQo false - - - 0 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:A0A140N890 uniprotkb:A0A140N890 intact:EBI-11476557 intact:EBI-11476557 psi-mi:ygea_ecobd(display_long)|uniprotkb:ygeA(gene name)|psi-mi:ygeA(display_short)|uniprotkb:EcL-DER(gene name synonym)|uniprotkb:ECBD_0884(locus name) psi-mi:ygea_ecobd(display_long)|uniprotkb:ygeA(gene name)|psi-mi:ygeA(display_short)|uniprotkb:EcL-DER(gene name synonym)|uniprotkb:ECBD_0884(locus name) psi-mi:"MI:0071"(molecular sieving) Ahn et al. (2015) imex:IM-24914|pubmed:26555188 taxid:469008(ecobd)|taxid:469008("Escherichia coli (strain B / BL21-DE3)") taxid:469008(ecobd)|taxid:469008("Escherichia coli (strain B / BL21-DE3)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0471"(MINT) intact:EBI-11476569|imex:IM-24914-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:C6EJ28(uniprot-removed-ac)|interpro:IPR001920(Asp/Glu racemase)|interpro:IPR004380(Aspartate racemase)|interpro:IPR015942(Asp/Glu/hydantoin racemase)|interpro:IPR018187|interpro:IPR033134|refseq:WP_000848664.1|go:"GO:0006807"(nitrogen compound metabolic process)|go:"GO:0008881"(glutamate racemase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0047689"(aspartate racemase activity)|rcsb pdb:5ELL|rcsb pdb:5ELM uniprotkb:C6EJ28(uniprot-removed-ac)|interpro:IPR001920(Asp/Glu racemase)|interpro:IPR004380(Aspartate racemase)|interpro:IPR015942(Asp/Glu/hydantoin racemase)|interpro:IPR018187|interpro:IPR033134|refseq:WP_000848664.1|go:"GO:0006807"(nitrogen compound metabolic process)|go:"GO:0008881"(glutamate racemase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0047689"(aspartate racemase activity)|rcsb pdb:5ELL|rcsb pdb:5ELM - - - figure legend:f1c|comment:"In order to elucidate the function and substrate specificity of the gene product of B21_02649 from E. coli, we determined a crystal structure of B21_02649 at a resolution of 1.8 Å. The crystal belonged to C2221, and an asymmetric unit of structure contains two molecules (Fig. 1A and B). This suggests that the protein functions as a dimer, which is consistent with size-exclusion chromatography results (Fig. 1C)"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2016/01/11 2016/01/17 rogid:YC1rGjodIU38/PDkW+HRi58kK6I469008 rogid:YC1rGjodIU38/PDkW+HRi58kK6I469008 rigid:FBB/ZwZkqtYHmGmBauRreK4XLQo false - - - 0 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)