#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:P22543	uniprotkb:Q02948	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703148|imex:IM-25291-21	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	-	crc64:806E3404EF260287	crc64:4BA74B614CABE1C0	figure legend:Fig. 1A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rigid:W/El9tTEh0mujnQk9ez6Ux0MGTU	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:P22543	uniprotkb:Q05789	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703148|imex:IM-25291-21	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	crc64:806E3404EF260287	-	figure legend:Fig. 1A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:W/El9tTEh0mujnQk9ez6Ux0MGTU	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:P22543	uniprotkb:P38270	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703148|imex:IM-25291-21	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	-	crc64:806E3404EF260287	crc64:202039BC7EC8BB16	figure legend:Fig. 1A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rigid:W/El9tTEh0mujnQk9ez6Ux0MGTU	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:P22543	uniprotkb:Q05919	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	intact:EBI-29972|uniprotkb:Q6B1J7|uniprotkb:D6VYZ7|ensemblfungi:YLR360W	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:vps38_yeast(display_long)|uniprotkb:VPS38(gene name)|psi-mi:VPS38(display_short)|uniprotkb:VPL17(gene name synonym)|uniprotkb:YLR360W(locus name)|uniprotkb:L8039.11(orf name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703148|imex:IM-25291-21	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	sgd:S000004352|refseq:NP_013464.3|dip:DIP-8809N|mint:Q05919|ensemblfungi:YLR360W(gene)|ensemblfungi:YLR360W_mRNA(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0000323"(lytic vacuole)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0035493"(SNARE complex assembly)|go:"GO:0045324"(late endosome to vacuole transport)|interpro:IPR040939|rcsb pdb:5DFZ|reactome:R-SCE-1632852	-	crc64:806E3404EF260287	crc64:70141E084D185015	figure legend:Fig. 1A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rogid:J13HZljzRxl6p0wukZg3YXJn6+w559292	rigid:W/El9tTEh0mujnQk9ez6Ux0MGTU	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:P22543	uniprotkb:P22219	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	intact:EBI-20347|uniprotkb:D6VQ98|ensemblfungi:YBR097W	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:vps15_yeast(display_long)|uniprotkb:VPS15(gene name)|psi-mi:VPS15(display_short)|uniprotkb:GRD8(gene name synonym)|uniprotkb:VPL19(gene name synonym)|uniprotkb:YBR0825(orf name)|uniprotkb:YBR097W(locus name)|uniprotkb:VAC4(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 15(gene name synonym)|uniprotkb:Golgi-retention defective mutant protein 8(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703148|imex:IM-25291-21	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	refseq:NP_009655.2|sgd:S000000301|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0048017"(inositol lipid-mediated signaling)|go:"GO:0071561"(nucleus-vacuole junction)|ensemblfungi:YBR097W(gene)|go:"GO:0106310"(protein serine kinase activity)|ensemblfungi:YBR097W_mRNA(transcript)|go:"GO:0106311"|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001680(WD40 repeat)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR036322|rcsb pdb:3GRE|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0030242"(autophagy of peroxisome)|dip:DIP-814N|mint:P22219	-	crc64:806E3404EF260287	crc64:247EBA5531E41FFB	figure legend:Fig. 1A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rogid:bDKA6IlevNTmtSQqleAbkY7/eAI559292	rigid:W/El9tTEh0mujnQk9ez6Ux0MGTU	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:P38270	uniprotkb:P22543	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703226|imex:IM-25291-43	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	crc64:202039BC7EC8BB16	crc64:806E3404EF260287	figure legend:Fig. 1C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rigid:+mWn0+dsOqQpij2TFBRSFsiyaXE	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:P38270	uniprotkb:Q05789	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703226|imex:IM-25291-43	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	crc64:202039BC7EC8BB16	-	figure legend:Fig. 1C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:+mWn0+dsOqQpij2TFBRSFsiyaXE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:P38270	uniprotkb:Q02948	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703226|imex:IM-25291-43	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	-	crc64:202039BC7EC8BB16	crc64:4BA74B614CABE1C0	figure legend:Fig. 1C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rigid:+mWn0+dsOqQpij2TFBRSFsiyaXE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:P38270	uniprotkb:P22219	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-20347|uniprotkb:D6VQ98|ensemblfungi:YBR097W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:vps15_yeast(display_long)|uniprotkb:VPS15(gene name)|psi-mi:VPS15(display_short)|uniprotkb:GRD8(gene name synonym)|uniprotkb:VPL19(gene name synonym)|uniprotkb:YBR0825(orf name)|uniprotkb:YBR097W(locus name)|uniprotkb:VAC4(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 15(gene name synonym)|uniprotkb:Golgi-retention defective mutant protein 8(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703226|imex:IM-25291-43	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_009655.2|sgd:S000000301|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0048017"(inositol lipid-mediated signaling)|go:"GO:0071561"(nucleus-vacuole junction)|ensemblfungi:YBR097W(gene)|go:"GO:0106310"(protein serine kinase activity)|ensemblfungi:YBR097W_mRNA(transcript)|go:"GO:0106311"|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001680(WD40 repeat)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR036322|rcsb pdb:3GRE|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0030242"(autophagy of peroxisome)|dip:DIP-814N|mint:P22219	-	crc64:202039BC7EC8BB16	crc64:247EBA5531E41FFB	figure legend:Fig. 1C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:bDKA6IlevNTmtSQqleAbkY7/eAI559292	rigid:+mWn0+dsOqQpij2TFBRSFsiyaXE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q05789	uniprotkb:P22543	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703241|imex:IM-25291-25	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	-	crc64:806E3404EF260287	figure legend:Fig. 1Cx|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rigid:+mWn0+dsOqQpij2TFBRSFsiyaXE	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q05789	uniprotkb:P38270	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703241|imex:IM-25291-25	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	-	-	crc64:202039BC7EC8BB16	figure legend:Fig. 1Cx|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rigid:+mWn0+dsOqQpij2TFBRSFsiyaXE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q05789	uniprotkb:Q02948	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703241|imex:IM-25291-25	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	-	-	crc64:4BA74B614CABE1C0	figure legend:Fig. 1Cx|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rigid:+mWn0+dsOqQpij2TFBRSFsiyaXE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:Q05789	uniprotkb:P22219	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-20347|uniprotkb:D6VQ98|ensemblfungi:YBR097W	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:vps15_yeast(display_long)|uniprotkb:VPS15(gene name)|psi-mi:VPS15(display_short)|uniprotkb:GRD8(gene name synonym)|uniprotkb:VPL19(gene name synonym)|uniprotkb:YBR0825(orf name)|uniprotkb:YBR097W(locus name)|uniprotkb:VAC4(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 15(gene name synonym)|uniprotkb:Golgi-retention defective mutant protein 8(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703241|imex:IM-25291-25	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	refseq:NP_009655.2|sgd:S000000301|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0048017"(inositol lipid-mediated signaling)|go:"GO:0071561"(nucleus-vacuole junction)|ensemblfungi:YBR097W(gene)|go:"GO:0106310"(protein serine kinase activity)|ensemblfungi:YBR097W_mRNA(transcript)|go:"GO:0106311"|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001680(WD40 repeat)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR036322|rcsb pdb:3GRE|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0030242"(autophagy of peroxisome)|dip:DIP-814N|mint:P22219	-	-	crc64:247EBA5531E41FFB	figure legend:Fig. 1Cx|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:bDKA6IlevNTmtSQqleAbkY7/eAI559292	rigid:+mWn0+dsOqQpij2TFBRSFsiyaXE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0102"(sequence tag identification)	psi-mi:"MI:0102"(sequence tag identification)
uniprotkb:P38270	uniprotkb:P22543	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703181|imex:IM-25291-44	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	crc64:202039BC7EC8BB16	crc64:806E3404EF260287	figure legend:Fig. 4A, Supp Fig. 3B|comment:Interaction not observed in ATG38-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rigid:8WwXGDqdfYyR3zHVHAEwl117TWI	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q05789	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703181|imex:IM-25291-44	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	crc64:202039BC7EC8BB16	-	figure legend:Fig. 4A, Supp Fig. 3B|comment:Interaction not observed in ATG38-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:8WwXGDqdfYyR3zHVHAEwl117TWI	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q05789	uniprotkb:P38270	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703189|imex:IM-25291-41	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	-	-	crc64:202039BC7EC8BB16	figure legend:Fig. 1B, 1D|comment:Interaction not observed in ATG14-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rigid:8mXivpMTFXEOx92P/qdu0i5xvWg	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q05789	uniprotkb:P22219	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-20347|uniprotkb:D6VQ98|ensemblfungi:YBR097W	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:vps15_yeast(display_long)|uniprotkb:VPS15(gene name)|psi-mi:VPS15(display_short)|uniprotkb:GRD8(gene name synonym)|uniprotkb:VPL19(gene name synonym)|uniprotkb:YBR0825(orf name)|uniprotkb:YBR097W(locus name)|uniprotkb:VAC4(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 15(gene name synonym)|uniprotkb:Golgi-retention defective mutant protein 8(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703189|imex:IM-25291-41	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	refseq:NP_009655.2|sgd:S000000301|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0048017"(inositol lipid-mediated signaling)|go:"GO:0071561"(nucleus-vacuole junction)|ensemblfungi:YBR097W(gene)|go:"GO:0106310"(protein serine kinase activity)|ensemblfungi:YBR097W_mRNA(transcript)|go:"GO:0106311"|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001680(WD40 repeat)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR036322|rcsb pdb:3GRE|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0030242"(autophagy of peroxisome)|dip:DIP-814N|mint:P22219	-	-	crc64:247EBA5531E41FFB	figure legend:Fig. 1B, 1D|comment:Interaction not observed in ATG14-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:bDKA6IlevNTmtSQqleAbkY7/eAI559292	rigid:8mXivpMTFXEOx92P/qdu0i5xvWg	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q05789	uniprotkb:P38270	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703197|imex:IM-25291-23	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	-	-	crc64:202039BC7EC8BB16	figure legend:Fig. 1B, 1D|comment:Interaction not observed in ATG14-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rigid:O1IJdYK4B7oc11haKrL1aNgJGHE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q05789	uniprotkb:Q02948	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703197|imex:IM-25291-23	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	-	-	crc64:4BA74B614CABE1C0	figure legend:Fig. 1B, 1D|comment:Interaction not observed in ATG14-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rigid:O1IJdYK4B7oc11haKrL1aNgJGHE	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q05789	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703208|imex:IM-25291-3	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	crc64:202039BC7EC8BB16	-	figure legend:Fig. 1B, Supp. 1D|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:EkkNPNYSdzOzS8dz3wpCnZuR97E	false	ha tag:?-?	calmodulin binding peptide plus protein a tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q05789	uniprotkb:P38270	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703270|imex:IM-25291-5	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	-	-	crc64:202039BC7EC8BB16	figure legend:Fig. 1D, Supp Fig. 1B|comment:Interaction not observed in ATG14-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rigid:8WwXGDqdfYyR3zHVHAEwl117TWI	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q05789	uniprotkb:P22543	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703270|imex:IM-25291-5	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	-	crc64:806E3404EF260287	figure legend:Fig. 1D, Supp Fig. 1B|comment:Interaction not observed in ATG14-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rigid:8WwXGDqdfYyR3zHVHAEwl117TWI	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:P22219	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-20347|uniprotkb:D6VQ98|ensemblfungi:YBR097W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:vps15_yeast(display_long)|uniprotkb:VPS15(gene name)|psi-mi:VPS15(display_short)|uniprotkb:GRD8(gene name synonym)|uniprotkb:VPL19(gene name synonym)|uniprotkb:YBR0825(orf name)|uniprotkb:YBR097W(locus name)|uniprotkb:VAC4(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 15(gene name synonym)|uniprotkb:Golgi-retention defective mutant protein 8(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703282|imex:IM-25291-46	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_009655.2|sgd:S000000301|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0048017"(inositol lipid-mediated signaling)|go:"GO:0071561"(nucleus-vacuole junction)|ensemblfungi:YBR097W(gene)|go:"GO:0106310"(protein serine kinase activity)|ensemblfungi:YBR097W_mRNA(transcript)|go:"GO:0106311"|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001680(WD40 repeat)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR036322|rcsb pdb:3GRE|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0030242"(autophagy of peroxisome)|dip:DIP-814N|mint:P22219	-	crc64:202039BC7EC8BB16	crc64:247EBA5531E41FFB	figure legend:Fig. 4A|comment:Interaction not observed in ATG38-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:bDKA6IlevNTmtSQqleAbkY7/eAI559292	rigid:8mXivpMTFXEOx92P/qdu0i5xvWg	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q05789	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703282|imex:IM-25291-46	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	crc64:202039BC7EC8BB16	-	figure legend:Fig. 4A|comment:Interaction not observed in ATG38-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:8mXivpMTFXEOx92P/qdu0i5xvWg	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q02948	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11703292|imex:IM-25291-48	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	-	crc64:202039BC7EC8BB16	crc64:4BA74B614CABE1C0	figure legend:Fig. 4A|comment:Interaction observed in ATG38-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/18	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rigid:+ftwhvaJep0DgiWscDb7NeDFikA	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q02948	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11705579|imex:IM-25291-29	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	-	crc64:202039BC7EC8BB16	crc64:4BA74B614CABE1C0	figure legend:Fig. 4D|comment:The association of Atg14 with Vps30 was found to be resistant to washes with high concentrations of salt. In contrast, Vps34 and Atg38 detached from Atg14–Vps30 in a concentration-dependent manner.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/23	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rigid:G6xarOMb8eC9+7av3QGtrct5Fn4	false	calmodulin binding peptide plus protein a tag:?-?	myc tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:P22543	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11705579|imex:IM-25291-29	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	crc64:202039BC7EC8BB16	crc64:806E3404EF260287	figure legend:Fig. 4D|comment:The association of Atg14 with Vps30 was found to be resistant to washes with high concentrations of salt. In contrast, Vps34 and Atg38 detached from Atg14–Vps30 in a concentration-dependent manner.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/23	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rigid:G6xarOMb8eC9+7av3QGtrct5Fn4	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q05789	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11705579|imex:IM-25291-29	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	crc64:202039BC7EC8BB16	-	figure legend:Fig. 4D|comment:The association of Atg14 with Vps30 was found to be resistant to washes with high concentrations of salt. In contrast, Vps34 and Atg38 detached from Atg14–Vps30 in a concentration-dependent manner.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/23	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:G6xarOMb8eC9+7av3QGtrct5Fn4	false	calmodulin binding peptide plus protein a tag:?-?	flag tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:P22543	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11709279|imex:IM-25291-13	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	crc64:202039BC7EC8BB16	crc64:806E3404EF260287	figure legend:Fig. 7A|comment:Interaction not observed in ATG38-/- cells. Use of tags showed that ATG38 was required to be a homodimer to stabilise this interaction.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/27	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rigid:8WwXGDqdfYyR3zHVHAEwl117TWI	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q05789	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11709279|imex:IM-25291-13	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	crc64:202039BC7EC8BB16	-	figure legend:Fig. 7A|comment:Interaction not observed in ATG38-/- cells. Use of tags showed that ATG38 was required to be a homodimer to stabilise this interaction.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/27	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:8WwXGDqdfYyR3zHVHAEwl117TWI	false	calmodulin binding peptide plus protein a tag:?-?	sufficient binding region:1-120	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:P22219	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-20347|uniprotkb:D6VQ98|ensemblfungi:YBR097W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:vps15_yeast(display_long)|uniprotkb:VPS15(gene name)|psi-mi:VPS15(display_short)|uniprotkb:GRD8(gene name synonym)|uniprotkb:VPL19(gene name synonym)|uniprotkb:YBR0825(orf name)|uniprotkb:YBR097W(locus name)|uniprotkb:VAC4(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 15(gene name synonym)|uniprotkb:Golgi-retention defective mutant protein 8(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11709323|imex:IM-25291-39	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_009655.2|sgd:S000000301|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0048017"(inositol lipid-mediated signaling)|go:"GO:0071561"(nucleus-vacuole junction)|ensemblfungi:YBR097W(gene)|go:"GO:0106310"(protein serine kinase activity)|ensemblfungi:YBR097W_mRNA(transcript)|go:"GO:0106311"|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001680(WD40 repeat)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR036322|rcsb pdb:3GRE|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0030242"(autophagy of peroxisome)|dip:DIP-814N|mint:P22219	-	crc64:202039BC7EC8BB16	crc64:247EBA5531E41FFB	figure legend:Fig. 7A|comment:Interaction not observed in ATG38-/- cells. Use of tags showed that ATG38 was required to be a homodimer to stabilise this interaction.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/27	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:bDKA6IlevNTmtSQqleAbkY7/eAI559292	rigid:8mXivpMTFXEOx92P/qdu0i5xvWg	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q05789	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11709323|imex:IM-25291-39	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	crc64:202039BC7EC8BB16	-	figure legend:Fig. 7A|comment:Interaction not observed in ATG38-/- cells. Use of tags showed that ATG38 was required to be a homodimer to stabilise this interaction.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/27	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:8mXivpMTFXEOx92P/qdu0i5xvWg	false	calmodulin binding peptide plus protein a tag:?-?	sufficient binding region:1-120	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q05789	uniprotkb:P25641	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-375693|uniprotkb:Q8NIL6|uniprotkb:D6VR71|ensemblfungi:YCR068W	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:atg15_yeast(display_long)|uniprotkb:ATG15(gene name)|psi-mi:ATG15(display_short)|uniprotkb:AUT5(gene name synonym)|uniprotkb:CVT17(gene name synonym)|uniprotkb:YCR068W(locus name)|uniprotkb:YCR68W(orf name)|uniprotkb:Autophagy-related protein 15(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 17(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11709365|imex:IM-25291-17	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	ensemblfungi:YCR068W_mRNA(transcript)|go:"GO:0000425"(pexophagy)|go:"GO:0004620"(phospholipase activity)|go:"GO:0004806"(triglyceride lipase activity)|go:"GO:0005775"(vacuolar lumen)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006624"(vacuolar protein processing)|go:"GO:0006660"(phosphatidylserine catabolic process)|go:"GO:0006914"(autophagy)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0030397"(membrane disassembly)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0034496"(multivesicular body membrane disassembly)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0046461"(neutral lipid catabolic process)|interpro:IPR002921(Lipase, class 3)|interpro:IPR029058|ensemblfungi:YCR068W(gene)|refseq:NP_009994.2|sgd:S000000664|dip:DIP-5001N	-	-	crc64:B56ABAB72B999019	figure legend:Supp. Fig. 2A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/27	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:ttgDIIQIdYUuP+ME547oz2gZuEA559292	rigid:tfbudRXe5x+qg34N1EEuaRMjrSU	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q12142	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-34628|uniprotkb:D6VRJ9|ensemblfungi:YDL149W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:atg9_yeast(display_long)|uniprotkb:ATG9(gene name)|psi-mi:ATG9(display_short)|uniprotkb:APG9(gene name synonym)|uniprotkb:AUT9(gene name synonym)|uniprotkb:CVT7(gene name synonym)|uniprotkb:YDL149W(locus name)|uniprotkb:D1560(orf name)|uniprotkb:Cytoplasm to vacuole targeting protein 7(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11709373|imex:IM-25291-19	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_010132.1|sgd:S000002308|reactome:R-SCE-1632852|dip:DIP-1938N|ensemblfungi:YDL149W(gene)|ensemblfungi:YDL149W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005739"(mitochondrion)|go:"GO:0005776"(autophagosome)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006914"(autophagy)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0044805"(late nucleophagy)|go:"GO:0061709"(reticulophagy)|go:"GO:0061908"(phagophore)|interpro:IPR007241(Autophagy protein 99)	-	crc64:202039BC7EC8BB16	-	figure legend:Supp Fig. 3A|comment:Interaction observed in ATG38-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/27	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:G8JXN2GY10y2yf9qEtiVbW9QIj8559292	rigid:AhSSNudYYpM1BBji19wCTDQDQzM	false	calmodulin binding peptide plus protein a tag:?-?	green fluorescent protein tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:P22219	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-20347|uniprotkb:D6VQ98|ensemblfungi:YBR097W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:vps15_yeast(display_long)|uniprotkb:VPS15(gene name)|psi-mi:VPS15(display_short)|uniprotkb:GRD8(gene name synonym)|uniprotkb:VPL19(gene name synonym)|uniprotkb:YBR0825(orf name)|uniprotkb:YBR097W(locus name)|uniprotkb:VAC4(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 15(gene name synonym)|uniprotkb:Golgi-retention defective mutant protein 8(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11891739|imex:IM-25291-50	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_009655.2|sgd:S000000301|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0048017"(inositol lipid-mediated signaling)|go:"GO:0071561"(nucleus-vacuole junction)|ensemblfungi:YBR097W(gene)|go:"GO:0106310"(protein serine kinase activity)|ensemblfungi:YBR097W_mRNA(transcript)|go:"GO:0106311"|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001680(WD40 repeat)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR036322|rcsb pdb:3GRE|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0030242"(autophagy of peroxisome)|dip:DIP-814N|mint:P22219	-	crc64:202039BC7EC8BB16	crc64:247EBA5531E41FFB	figure legend:Fig. 4Ai|comment:Interaction not observed in ATG38-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/07/15	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:bDKA6IlevNTmtSQqleAbkY7/eAI559292	rigid:8mXivpMTFXEOx92P/qdu0i5xvWg	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q05789	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11891739|imex:IM-25291-50	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	crc64:202039BC7EC8BB16	-	figure legend:Fig. 4Ai|comment:Interaction not observed in ATG38-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/07/15	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:8mXivpMTFXEOx92P/qdu0i5xvWg	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:P22543	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11891750|imex:IM-25291-52	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	crc64:202039BC7EC8BB16	crc64:806E3404EF260287	figure legend:Fig. 4Ai|comment:Interaction not observed in ATG38-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/07/15	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rigid:8WwXGDqdfYyR3zHVHAEwl117TWI	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q05789	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11891750|imex:IM-25291-52	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	crc64:202039BC7EC8BB16	-	figure legend:Fig. 4Ai|comment:Interaction not observed in ATG38-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/07/15	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:8WwXGDqdfYyR3zHVHAEwl117TWI	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q02948	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:"MI:0004"(affinity chromatography technology)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11891761|imex:IM-25291-54	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	-	crc64:202039BC7EC8BB16	crc64:4BA74B614CABE1C0	figure legend:Fig. 4Ai|comment:Interaction observed in ATG38-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/07/15	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rigid:+ftwhvaJep0DgiWscDb7NeDFikA	false	calmodulin binding peptide plus protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q05789	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0018"(two hybrid)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11705604|imex:IM-25291-31	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	crc64:202039BC7EC8BB16	-	figure legend:Fig. 5A, 5B, Supp. Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/23	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:EkkNPNYSdzOzS8dz3wpCnZuR97E	false	-	sufficient binding region:1-80	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P22543	uniprotkb:Q05789	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0018"(two hybrid)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11705608|imex:IM-25291-33	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	crc64:806E3404EF260287	-	figure legend:Fig. 5A, Supp. Fig 2B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/23	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:ADZ4NYDJiE9jndKnV6tHFOpo5sE	false	-	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q05789	uniprotkb:Q05789	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0018"(two hybrid)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11705644|imex:IM-25291-37	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	-	-	figure legend:Fig. 6A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/23	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:+oYRyedGujcLbueCo0gMYryUVk4	false	sufficient binding region:121-226	sufficient binding region:121-226	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q05789	uniprotkb:P22543	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0096"(pull down)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11705627|imex:IM-25291-35	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	-	crc64:806E3404EF260287	figure legend:Fig. 5C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/06/13	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rigid:u/3hhHPYClXzzqWl957iCDs1KPY	false	glutathione s tranferase tag:?-?|sufficient binding region:1-120	binding-associated region:?-?|calmodulin binding peptide plus protein a tag:?-?	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q05789	uniprotkb:P22219	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-20347|uniprotkb:D6VQ98|ensemblfungi:YBR097W	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:vps15_yeast(display_long)|uniprotkb:VPS15(gene name)|psi-mi:VPS15(display_short)|uniprotkb:GRD8(gene name synonym)|uniprotkb:VPL19(gene name synonym)|uniprotkb:YBR0825(orf name)|uniprotkb:YBR097W(locus name)|uniprotkb:VAC4(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 15(gene name synonym)|uniprotkb:Golgi-retention defective mutant protein 8(gene name synonym)	psi-mi:"MI:0096"(pull down)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11705627|imex:IM-25291-35	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	refseq:NP_009655.2|sgd:S000000301|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0048017"(inositol lipid-mediated signaling)|go:"GO:0071561"(nucleus-vacuole junction)|ensemblfungi:YBR097W(gene)|go:"GO:0106310"(protein serine kinase activity)|ensemblfungi:YBR097W_mRNA(transcript)|go:"GO:0106311"|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001680(WD40 repeat)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR036322|rcsb pdb:3GRE|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0030242"(autophagy of peroxisome)|dip:DIP-814N|mint:P22219	-	-	crc64:247EBA5531E41FFB	figure legend:Fig. 5C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/06/13	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:bDKA6IlevNTmtSQqleAbkY7/eAI559292	rigid:u/3hhHPYClXzzqWl957iCDs1KPY	false	glutathione s tranferase tag:?-?|sufficient binding region:1-120	binding-associated region:?-?	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q05789	uniprotkb:Q05789	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0071"(molecular sieving)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0407"(direct interaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11705659|imex:IM-25291-9	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	-	-	figure legend:Fig. 6B|comment:The molecular mass of the native form of Atg38 was distributed around 50–80 kD, suggesting either a homodimer or homotrimer.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2016/04/09	2016/05/23	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:+oYRyedGujcLbueCo0gMYryUVk4	false	-	-	-	-	psi-mi:"MI:0818"(molecular weight estimation by coomasie staining)	psi-mi:"MI:0818"(molecular weight estimation by coomasie staining)
uniprotkb:Q05789	uniprotkb:Q05789	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0028"(cosedimentation in solution)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0407"(direct interaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11705680|imex:IM-25291-11	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	-	-	figure legend:Fig. 6C|comment:Sedimentation coefficient = 3.0 S in solution. This indicates that Atg38 exists as a particle of 50.2 kD, which is consistent with the molecular mass of a dimer.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2016/04/09	2016/05/23	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:vm1Wqc8QH7bhncjjgduiAT9c3C4	false	-	-	2	0	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P38270	uniprotkb:Q05789	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-35873|uniprotkb:D6VYL2|ensemblfungi:YLR211C	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:atg38_yeast(display_long)|uniprotkb:ATG38(gene name)|psi-mi:ATG38(display_short)|uniprotkb:L8167.20(orf name)|uniprotkb:YLR211C(locus name)	psi-mi:"MI:0071"(molecular sieving)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11709350|imex:IM-25291-15	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	sgd:S000004201|refseq:NP_013312.2|mint:Q05789|dip:DIP-4299N|ensemblfungi:YLR211C(gene)|ensemblfungi:YLR211C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5KC1	-	crc64:202039BC7EC8BB16	-	figure legend:Supp. Fig. 1C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/27	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:T3P2OWz/o81Fe25LncWZ2jCqt/U559292	rigid:G6xarOMb8eC9+7av3QGtrct5Fn4	false	calmodulin binding protein tag:?-?	flag tag:c-c	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:Q02948	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:"MI:0071"(molecular sieving)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11709350|imex:IM-25291-15	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	-	crc64:202039BC7EC8BB16	crc64:4BA74B614CABE1C0	figure legend:Supp. Fig. 1C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/27	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rigid:G6xarOMb8eC9+7av3QGtrct5Fn4	false	calmodulin binding protein tag:?-?	myc tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38270	uniprotkb:P22543	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0071"(molecular sieving)	Araki et al. (2013)	imex:IM-25291|pubmed:24165940	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-11709350|imex:IM-25291-15	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	crc64:202039BC7EC8BB16	crc64:806E3404EF260287	figure legend:Supp. Fig. 1C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2016/04/09	2016/05/27	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	rigid:G6xarOMb8eC9+7av3QGtrct5Fn4	false	calmodulin binding protein tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)