#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q06106 uniprotkb:P0CX37 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-7433422|uniprotkb:P05751|uniprotkb:Q02894|uniprotkb:D6VQH5|intact:MINT-8285675|uniprotkb:P02365|ensemblfungi:YBR181C|ensemblfungi:YPL090C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:rs6a_yeast(display_long)|uniprotkb:RPS6A(gene name)|psi-mi:RPS6A(display_short)|uniprotkb:RP9(gene name synonym)|uniprotkb:RPS101(gene name synonym)|uniprotkb:RPS10B(gene name synonym)|uniprotkb:S10(gene name synonym)|uniprotkb:YS4(gene name synonym)|uniprotkb:LPG18C(orf name)|uniprotkb:YPL090C(locus name)|uniprotkb:Small ribosomal subunit protein eS6-A(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 rcsb pdb:5WYJ|rcsb pdb:6RBD|rcsb pdb:5DGE|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5TGM|rcsb pdb:3J78|rcsb pdb:4U3M|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V88|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:4V92|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:5LL6|reactome:R-SCE-156827|reactome:R-SCE-166208|reactome:R-SCE-72689|reactome:R-SCE-72695|reactome:R-SCE-72702|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|rcsb pdb:5FCI|rcsb pdb:5FCJ|reactome:R-SCE-6791226|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5LYB|rcsb pdb:5TGA|rcsb pdb:5TZS|rcsb pdb:6RBE|rcsb pdb:7AJT|rcsb pdb:7AJU|rcsb pdb:6ZQB|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6WDR|rcsb pdb:6WOO|rcsb pdb:6ZCE|interpro:IPR014401(Ribosomal protein S6, eukaryotic)|sgd:S000006011|interpro:IPR018282|refseq:NP_015235.1|interpro:IPR001377(Ribosomal protein S6e)|rcsb pdb:3J16|refseq:NP_009740.3|rcsb pdb:7B7D|rcsb pdb:7NRC|rcsb pdb:7NRD|reactome:R-SCE-72649|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:5DAT|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:5JUT|rcsb pdb:5JUU|rcsb pdb:5DC3|rcsb pdb:5I4L|rcsb pdb:6EML|rcsb pdb:6ZQC|ensemblfungi:YBR181C(gene)|ensemblfungi:YBR181C_mRNA(transcript)|ensemblfungi:YPL090C(gene)|ensemblfungi:YPL090C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|rcsb pdb:5ON6|rcsb pdb:6FAI|rcsb pdb:6I7O|rcsb pdb:6Q8Y|rcsb pdb:5MEI|rcsb pdb:5TBW|rcsb pdb:5WLC|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:6ZU9|rcsb pdb:7A1G|rcsb pdb:6HHQ|reactome:R-SCE-1799339|rcsb pdb:6S47|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6SNT|rcsb pdb:6SV4|rcsb pdb:6Y7C|rcsb pdb:6KE6|rcsb pdb:6XIQ|rcsb pdb:6XIR|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:6ZVI - - comment:mint figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:EeJ5VG5FWn5tAtQo5cEsiAM6K7k559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P0CX35 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-7433231|intact:MINT-8285663|uniprotkb:D3DLF2|uniprotkb:P05753|ensemblfungi:YHR203C|ensemblfungi:YJR145C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:rs4a_yeast(display_long)|uniprotkb:RPS4A(gene name)|psi-mi:RPS4A(display_short)|uniprotkb:RP5(gene name synonym)|uniprotkb:RPS7B(gene name synonym)|uniprotkb:S7(gene name synonym)|uniprotkb:YS6(gene name synonym)|uniprotkb:J2186(orf name)|uniprotkb:YJR145C(locus name)|uniprotkb:Small ribosomal subunit protein eS4-A(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:4U3M|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V6I|rcsb pdb:4V88|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:4V92|interpro:IPR014722(Translation protein SH3-like, subgroup)|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:5LL6|reactome:R-SCE-156827|reactome:R-SCE-72689|reactome:R-SCE-72695|reactome:R-SCE-72702|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|rcsb pdb:5DGE|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5TGM|rcsb pdb:5FCI|rcsb pdb:5FCJ|interpro:IPR032277|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5LYB|rcsb pdb:5TGA|rcsb pdb:5TZS|rcsb pdb:7AJT|rcsb pdb:7AJU|interpro:IPR018199|interpro:IPR013843(Ribosomal protein S4e, N-terminal)|sgd:S000003906|interpro:IPR000876(Ribosomal protein S4e)|interpro:IPR005824(KOW)|refseq:NP_012679.3|interpro:IPR002942(RNA-binding S4)|interpro:IPR013845(Ribosomal protein S4e, central)|refseq:NP_012073.1|interpro:IPR036986|rcsb pdb:7B7D|rcsb pdb:7NRC|rcsb pdb:7NRD|reactome:R-SCE-6791226|reactome:R-SCE-72649|rcsb pdb:3J77|rcsb pdb:3J78|rcsb pdb:5DAT|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:5JUT|rcsb pdb:5JUU|rcsb pdb:5DC3|rcsb pdb:5I4L|rcsb pdb:6EML|ensemblfungi:YHR203C(gene)|ensemblfungi:YHR203C_mRNA(transcript)|ensemblfungi:YJR145C(gene)|ensemblfungi:YJR145C_mRNA(transcript)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0030686"(90S preribosome)|rcsb pdb:3J6X|rcsb pdb:3J6Y|interpro:IPR038237|rcsb pdb:5ON6|rcsb pdb:6FAI|rcsb pdb:6I7O|rcsb pdb:6Q8Y|rcsb pdb:5MEI|rcsb pdb:5TBW|rcsb pdb:5WLC|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|interpro:IPR041982|rcsb pdb:6HHQ|reactome:R-SCE-1799339|rcsb pdb:6RBD|rcsb pdb:6RBE|rcsb pdb:6S47|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6SNT|rcsb pdb:6SV4|rcsb pdb:6Y7C|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6WDR|rcsb pdb:6WOO|rcsb pdb:6ZCE|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:6ZU9|rcsb pdb:7A1G|rcsb pdb:6KE6|rcsb pdb:6XIQ|rcsb pdb:6XIR|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:6ZVI - - comment:mint figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:0/1PAh0d9haBkt8sGtOf/pKOorg559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:Q08965 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-3683|uniprotkb:D6W3F3|ensemblfungi:YPL217C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:bms1_yeast(display_long)|uniprotkb:YPL217C(locus name)|uniprotkb:BMS1(gene name)|psi-mi:BMS1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_015107.1|sgd:S000006138|dip:DIP-6562N|mint:Q08965|ensemblfungi:YPL217C(gene)|ensemblfungi:YPL217C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000479"("endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0030686"(90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR007034(Protein of unknown function DUF663)|interpro:IPR012948(AARP2CN)|interpro:IPR027417|interpro:IPR030387|interpro:IPR037875|interpro:IPR039761|rcsb pdb:4CLQ|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:9A337F1EE0B0F21D figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:wG8wlE3l3G1E7VJiO/epPEDxTOE559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:Q02931 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-37773|uniprotkb:D6W3P1|ensemblfungi:YPL126W psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:utp17_yeast(display_long)|uniprotkb:NAN1(gene name)|psi-mi:NAN1(display_short)|uniprotkb:UTP17(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein 17(gene name synonym)|uniprotkb:U three protein 17(gene name synonym)|uniprotkb:U3 protein 17 required for transcription(gene name synonym)|uniprotkb:YPL126W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_015199.1|sgd:S000006047|dip:DIP-3999N|mint:Q02931|ensemblfungi:YPL126W(gene)|ensemblfungi:YPL126W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:F4E3687BD328230E figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:IwajTHwER9UA233SxhHd4/5Tmu0559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P14126 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-15364|uniprotkb:Q08459|uniprotkb:D6W2C6|ensemblfungi:YOR063W psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:rl3_yeast(display_long)|uniprotkb:MAK8(gene name synonym)|uniprotkb:RPL3(gene name)|psi-mi:RPL3(display_short)|uniprotkb:TCM1(gene name synonym)|uniprotkb:YOR063W(locus name)|uniprotkb:YOR29-14(orf name)|uniprotkb:YL1(gene name synonym)|uniprotkb:RP1(gene name synonym)|uniprotkb:Maintenance of killer protein 8(gene name synonym)|uniprotkb:Trichodermin resistance protein(gene name synonym)|uniprotkb:Large ribosomal subunit protein uL3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_014706.1|sgd:S000005589|interpro:IPR000597(Ribosomal protein L3)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR019926|rcsb pdb:1K5Y|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:3J78|rcsb pdb:3JCT|rcsb pdb:4U3M|rcsb pdb:4U3N|go:"GO:1990145"(maintenance of translational fidelity)|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|ensemblfungi:YOR063W(gene)|ensemblfungi:YOR063W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0022625"(cytosolic large ribosomal subunit)|rcsb pdb:4U6F|rcsb pdb:4U56|rcsb pdb:4V4B|rcsb pdb:4V6I|rcsb pdb:4V7F|rcsb pdb:4V7R|rcsb pdb:4V88|rcsb pdb:4V8T|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:4V91|rcsb pdb:5APN|rcsb pdb:5APO|rcsb pdb:5DAT|rcsb pdb:5DC3|rcsb pdb:5DGE|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5FL8|rcsb pdb:5GAK|rcsb pdb:5H4P|rcsb pdb:5I4L|rcsb pdb:5JCS|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:5JUT|rcsb pdb:5JUU|rcsb pdb:5LYB|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5MEI|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:5ON6|rcsb pdb:5T62|rcsb pdb:5T6R|rcsb pdb:5TBW|rcsb pdb:5TGA|rcsb pdb:5TGM|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6EM1|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6HD7|rcsb pdb:6HHQ|rcsb pdb:6I7O|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6N8M|rcsb pdb:6R86|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6RZZ|rcsb pdb:6S05|rcsb pdb:6S47|rcsb pdb:6SNT|rcsb pdb:6SV4|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6WOO|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:7AZY|rcsb pdb:7B7D|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:7NRC|rcsb pdb:7NRD|reactome:R-SCE-156827|reactome:R-SCE-1799339|reactome:R-SCE-72689|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|rcsb pdb:6N8N|rcsb pdb:6N8O|rcsb pdb:6OIG|rcsb pdb:6Q8Y|rcsb pdb:6QIK|rcsb pdb:6QT0|dip:DIP-6264N|mint:P14126 - - - figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:cQmK1aAKV5F5UvYZOCVIzkjLZtY559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:Q08208 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979 - - crc64:338F73B13DAE3282 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:Q03532 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis) - - crc64:EE15D51A7F6BE1A2 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:Q05022 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-16011|uniprotkb:D6W054|ensemblfungi:YMR229C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:rrp5_yeast(display_long)|uniprotkb:RRP5(gene name)|psi-mi:RRP5(display_short)|uniprotkb:FMI1(gene name synonym)|uniprotkb:YMR229C(locus name)|uniprotkb:YM9959.11C(orf name)|uniprotkb:Ribosomal RNA-processing protein 5(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein RRP5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_013956.1|sgd:S000004842|ensemblfungi:YMR229C(gene)|ensemblfungi:YMR229C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034463"(90S preribosome assembly)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0034513"(box H/ACA snoRNA binding)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR003029(S1, RNA binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR022967|rcsb pdb:5C9S|rcsb pdb:5NLG|rcsb pdb:5WLC|rcsb pdb:5WWM|rcsb pdb:5WYJ|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-6535N|mint:Q05022 - - crc64:39BF46E5587B3B0A figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:FUIsTk3NLRDu8llnVgX5cDLAbB8559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:Q04305 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-28183|uniprotkb:D6VZR6|ensemblfungi:YMR093W psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:utp15_yeast(display_long)|uniprotkb:U three protein 15(gene name synonym)|uniprotkb:U3 protein 15 required for transcription(gene name synonym)|uniprotkb:YM9582.18(orf name)|uniprotkb:YMR093W(locus name)|uniprotkb:UTP15(gene name)|psi-mi:UTP15(display_short)|uniprotkb:t-UTP15(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_013811.1|sgd:S000004699|dip:DIP-1962N|mint:Q04305|ensemblfungi:YMR093W(gene)|ensemblfungi:YMR093W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018983|interpro:IPR019775|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:2B74BA8BD496C8DA figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:4DswftRHSsPlKxMEIH1VnCc98r8559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P23248 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-16136|ensemblfungi:YML063W|uniprotkb:D6VZB0 psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:rs3a2_yeast(display_long)|uniprotkb:RPS1B(gene name)|psi-mi:RPS1B(display_short)|uniprotkb:PLC2(gene name synonym)|uniprotkb:RPS10B(gene name synonym)|uniprotkb:RP10B(gene name synonym)|uniprotkb:Small ribosomal subunit protein eS1-B(gene name synonym)|uniprotkb:YML063W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 ensemblfungi:YML063W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0030686"(90S preribosome)|ensemblfungi:YML063W(gene)|refseq:NP_013648.1|sgd:S000004528|interpro:IPR001593(Ribosomal protein S3Ae)|interpro:IPR018281|reactome:R-SCE-6791226|reactome:R-SCE-72649|reactome:R-SCE-1799339|interpro:IPR027500|reactome:R-SCE-156827|reactome:R-SCE-72689|reactome:R-SCE-72695|reactome:R-SCE-72702|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|rcsb pdb:6WOO - - - figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:3PM+D8dM9Qt/e+WZaTovSXNdMFQ559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:Q06078 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-359|uniprotkb:D6VZ43|ensemblfungi:YLR409C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:utp21_yeast(display_long)|uniprotkb:YLR409C(locus name)|uniprotkb:L8084.22(orf name)|uniprotkb:UTP21(gene name)|psi-mi:UTP21(display_short)|uniprotkb:U three protein 21(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 sgd:S000004401|refseq:NP_013513.3|dip:DIP-6416N|mint:Q06078|ensemblfungi:YLR409C(gene)|ensemblfungi:YLR409C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR007319(Small-subunit processome, Utp21)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|rcsb pdb:4HNX|rcsb pdb:4NSX|rcsb pdb:5JPQ|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:F1F856EF28369351 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:p8cVdV7LI9hwgOSJSz2SUk+Z6Aw559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:Q05946 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-34702|uniprotkb:D6VYM2|ensemblfungi:YLR222C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:utp13_yeast(display_long)|uniprotkb:UTP13(gene name)|psi-mi:UTP13(display_short)|uniprotkb:U three protein 13(gene name synonym)|uniprotkb:YLR222C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_013323.1|sgd:S000004212|mint:Q05946|dip:DIP-4790N|ensemblfungi:YLR222C(gene)|ensemblfungi:YLR222C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR013934(Small-subunit processome, Utp13)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:A3DEA4288917027D figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:ODH5ePQUIivfhIrcLu9OwoWowI8559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:Q12460 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-17148|ensemblfungi:YLR197W|uniprotkb:D6VYK0 psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:nop56_yeast(display_long)|uniprotkb:SIK1(gene name synonym)|uniprotkb:Ribosome biosynthesis protein SIK1(gene name synonym)|uniprotkb:YLR197W(locus name)|uniprotkb:L8167.9(orf name)|uniprotkb:NOP56(gene name)|psi-mi:NOP56(display_short)|uniprotkb:Suppressor of I kappa b protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 ensemblfungi:YLR197W(gene)|ensemblfungi:YLR197W_mRNA(transcript)|go:"GO:0000154"(rRNA modification)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|refseq:NP_013298.1|sgd:S000004187|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-4405N|mint:Q12460 - - crc64:F8522A5870EF4842 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:l3UAmoOUECH1uov6nv7MSwSv/3s559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:Q12220 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-5896|uniprotkb:Q05386|uniprotkb:D6VYC4|ensemblfungi:YLR129W psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:utp12_yeast(display_long)|uniprotkb:DIP2(gene name)|psi-mi:DIP2(display_short)|uniprotkb:YLR129W(locus name)|uniprotkb:L9233.1(orf name)|uniprotkb:L3116(orf name)|uniprotkb:UTP12(gene name synonym)|uniprotkb:U three protein 12(gene name synonym)|uniprotkb:DOM34-interacting protein 2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_013230.1|sgd:S000004119|dip:DIP-6494N|mint:Q12220|ensemblfungi:YLR129W(gene)|ensemblfungi:YLR129W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:7D9AEC7AF6A9C740 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:8Cz4O8hzaHCSq72kVSptQqDE94M559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P33750 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-17651|uniprotkb:D6VXZ1|ensemblfungi:YLL011W psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:dca13_yeast(display_long)|uniprotkb:SOF1(gene name)|psi-mi:SOF1(display_short)|uniprotkb:YLL011W(locus name)|uniprotkb:L1339(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein SOF1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 ensemblfungi:YLL011W(gene)|ensemblfungi:YLL011W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR007287(Sof1-like protein)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR020472|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_013090.1|sgd:S000003934|dip:DIP-746N|mint:P33750 - - crc64:4B28371CC61DE7E4 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:stTLdABNsa3SvTkNOZBteSNAVJA559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P42945 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-1884|uniprotkb:D6VW75|ensemblfungi:YJL109C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:utp10_yeast(display_long)|uniprotkb:UTP10(gene name)|psi-mi:UTP10(display_short)|uniprotkb:t-UTP10(gene name synonym)|uniprotkb:U three protein 10(gene name synonym)|uniprotkb:U3 protein 10 required for transcription(gene name synonym)|uniprotkb:J0808(orf name)|uniprotkb:YJL109C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_012426.1|sgd:S000003645|dip:DIP-6466N|mint:P42945|ensemblfungi:YJL109C(gene)|ensemblfungi:YJL109C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012954(BP28, C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR022125|interpro:IPR040191|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:064480D1D249B241 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:c7sxmixQnRLFmjuUMDkqZ260ebg559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P47077 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-25778|uniprotkb:D6VWG7|ensemblfungi:YJL010C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:nop9_yeast(display_long)|uniprotkb:YJL010C(locus name)|uniprotkb:J1357(orf name)|uniprotkb:NOP9(gene name)|psi-mi:NOP9(display_short)|uniprotkb:Pumilio domain-containing protein NOP9(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 sgd:S000003547|refseq:NP_012524.3|mint:P47077|dip:DIP-5668N|ensemblfungi:YJL010C(gene)|ensemblfungi:YJL010C_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|interpro:IPR001313(Pumilio RNA-binding region)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040000|rcsb pdb:5SVD|rcsb pdb:5WTX|rcsb pdb:5WTY|rcsb pdb:6WPI - - - figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:zlvVoDVv08jbqC1RJk7A/DhmIbE559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P53276 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-23301|uniprotkb:D6VUR0|ensemblfungi:YGR128C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:utp8_yeast(display_long)|uniprotkb:UTP8(gene name)|psi-mi:UTP8(display_short)|uniprotkb:t-UTP8(gene name synonym)|uniprotkb:U three protein 8(gene name synonym)|uniprotkb:U3 protein 8 required for transcription(gene name synonym)|uniprotkb:YGR128C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 sgd:S000003360|refseq:NP_011644.3|dip:DIP-6747N|mint:P53276|ensemblfungi:YGR128C(gene)|ensemblfungi:YGR128C_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR018843|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU - - crc64:6F5AE1492F841F49 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:dG2UtBMuPQujwdovAL/FDjpqps0559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P53254 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:9A2B5C885493D7D3 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P45818 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-15686|uniprotkb:D6VTY1|ensemblfungi:YGL171W psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:rok1_yeast(display_long)|uniprotkb:ROK1(gene name)|psi-mi:ROK1(display_short)|uniprotkb:YGL171W(locus name)|uniprotkb:G1651(orf name)|uniprotkb:Rescuer of KEM1 protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_011344.1|sgd:S000003139|ensemblfungi:YGL171W(gene)|ensemblfungi:YGL171W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0048254"(snoRNA localization)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR044764|reactome:R-SCE-6791226|dip:DIP-5111N|mint:P45818 - - crc64:CACB950B8A15D5A2 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:Id8imuuTKPSw1r4qwGClHrYAxpQ559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P53131 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131 - - crc64:DA8A085EC50FF430 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:Q02354 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-22119|uniprotkb:Q04115|uniprotkb:D6VT74|ensemblfungi:YDR449C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:utp6_yeast(display_long)|uniprotkb:U three protein 6(gene name synonym)|uniprotkb:YDR449C(locus name)|uniprotkb:D9461.34(orf name)|uniprotkb:UTP6(gene name)|psi-mi:UTP6(display_short) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 sgd:S000002857|refseq:NP_010737.1|dip:DIP-6479N|mint:Q02354|ensemblfungi:YDR449C(gene)|ensemblfungi:YDR449C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013949(U3 small nucleolar RNA-associated protein 6)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:60FD2E0E1B3B79B3 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:uuddsOEkk0S7gNnrPzGZ/R0eHaA559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:Q06679 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-35712|uniprotkb:D6VSV7|ensemblfungi:YDR324C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:utp4_yeast(display_long)|uniprotkb:UTP4(gene name)|psi-mi:UTP4(display_short)|uniprotkb:t-UTP4(gene name synonym)|uniprotkb:U three protein 4(gene name synonym)|uniprotkb:U3 protein 4 required for transcription(gene name synonym)|uniprotkb:YDR324C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_010611.3|sgd:S000002732|mint:Q06679|dip:DIP-6436N|ensemblfungi:YDR324C(gene)|ensemblfungi:YDR324C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034455"(t-UTP complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:5D1C77899CABB40B figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:kAD4RO628jpcbjUoQXQbjcGVY88559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:Q12176 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N - - - figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P15646 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:56A8B958A7B6066E figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P36009 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-5844|ensemblfungi:YKL078W|uniprotkb:Q07040|uniprotkb:D6VXK9 psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:dhr2_yeast(display_long)|uniprotkb:DHR2(gene name)|psi-mi:DHR2(display_short)|uniprotkb:YKL078W(locus name)|uniprotkb:YKL408(orf name)|uniprotkb:DEAH box RNA helicase DHR2(gene name synonym)|uniprotkb:Helicase JA2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 ensemblfungi:YKL078W(gene)|ensemblfungi:YKL078W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_012845.1|sgd:S000001561|dip:DIP-6424N|mint:P36009|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417 - - crc64:AAFA78B5F6215D89 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:UneKv9+4eIsC09fOzm8AvKCOCVs559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P38882 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-24892|uniprotkb:D3DLE4|ensemblfungi:YHR196W psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:utp9_yeast(display_long)|uniprotkb:t-UTP9(gene name synonym)|uniprotkb:UTP9(gene name)|psi-mi:UTP9(display_short)|uniprotkb:U three protein 9(gene name synonym)|uniprotkb:U3 protein 9 required for transcription(gene name synonym)|uniprotkb:YHR196W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_012066.1|sgd:S000001239|mint:P38882|dip:DIP-6634N|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|ensemblfungi:YHR196W(gene)|ensemblfungi:YHR196W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR015943(WD40/YVTN repeat-like)|rcsb pdb:5WLC|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4 - - crc64:0C482C6A32855FF1 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:cjrwDuKyMEgU0Zgn28yzNi6haV4559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P25635 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-14332|uniprotkb:P25633|uniprotkb:P25636|uniprotkb:D6VR63|ensemblfungi:YCR057C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:pwp2_yeast(display_long)|uniprotkb:PWP2(gene name)|psi-mi:PWP2(display_short)|uniprotkb:UTP1(gene name synonym)|uniprotkb:YCR057C(locus name)|uniprotkb:YCR55C/YCR57C/YCR58C(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein 1(gene name synonym)|uniprotkb:U three protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 go:"GO:0000920"(septum digestion after cytokinesis)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034388"(Pwp2p-containing subcomplex of 90S preribosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR007148(Small-subunit processome, Utp12)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR027145|interpro:IPR036322|rcsb pdb:5I2T|rcsb pdb:5WLC|rcsb pdb:5WYJ|ensemblfungi:YCR057C(gene)|ensemblfungi:YCR057C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:5WYK|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|refseq:NP_009984.1|sgd:S000000653|mint:P25635|dip:DIP-1868N - - crc64:CBEE4720F81378B6 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:3JKhaE50yPlCymnkEC14JB9atNY559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P25586 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-21773|uniprotkb:D6VQV7|ensemblfungi:YCL059C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:krr1_yeast(display_long)|uniprotkb:KRR1(gene name)|psi-mi:KRR1(display_short)|uniprotkb:KRR-R motif-containing protein 1(gene name synonym)|uniprotkb:Ribosomal RNA assembly protein KRR1(gene name synonym)|uniprotkb:YCL59C(orf name)|uniprotkb:YCL059C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_009872.1|sgd:S000000564|mint:P25586|dip:DIP-1408N|ensemblfungi:YCL059C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR004087(K Homology)|interpro:IPR024166|interpro:IPR036612|interpro:IPR041174|rcsb pdb:4QMF|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:7AJT|reactome:R-SCE-6791226|ensemblfungi:YCL059C(gene) - - crc64:7A7F964E2C7FD056 figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:wveCX/DmVjCNLOIejb/nWbrbX3o559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P10664 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-15390|uniprotkb:D6VQ32|ensemblfungi:YBR031W psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:rl4a_yeast(display_long)|uniprotkb:RPL4A(gene name)|psi-mi:RPL4A(display_short)|uniprotkb:RPL2(gene name synonym)|uniprotkb:RPL2A(gene name synonym)|uniprotkb:YBR031W(locus name)|uniprotkb:YBR0315(orf name)|uniprotkb:L2(gene name synonym)|uniprotkb:YL2(gene name synonym)|uniprotkb:RP2(gene name synonym)|uniprotkb:Large ribosomal subunit protein uL4-A(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660002|imex:IM-25106-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_009587.1|sgd:S000000235|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6HD7|rcsb pdb:6HHQ|rcsb pdb:6I7O|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6N8M|rcsb pdb:6N8N|rcsb pdb:6N8O|rcsb pdb:6OIG|rcsb pdb:6Q8Y|rcsb pdb:6QIK|rcsb pdb:6QT0|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6R86|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6RZZ|rcsb pdb:6S05|rcsb pdb:6S47|rcsb pdb:6SNT|rcsb pdb:6EM4|rcsb pdb:6SV4|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6WOO|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:7AZY|rcsb pdb:7B7D|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:7NRC|rcsb pdb:7NRD|reactome:R-SCE-156827|reactome:R-SCE-1799339|reactome:R-SCE-72689|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR002136(Ribosomal protein L4/L1e)|interpro:IPR013000(Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site)|interpro:IPR023574|interpro:IPR025755|rcsb pdb:1K5Y|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:3J78|rcsb pdb:3JCT|rcsb pdb:4U3M|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V6I|rcsb pdb:4V7F|rcsb pdb:4V7R|rcsb pdb:4V88|rcsb pdb:4V8T|rcsb pdb:4V8Y|ensemblfungi:YBR031W(gene)|rcsb pdb:4V8Z|rcsb pdb:4V91|rcsb pdb:5APN|rcsb pdb:5APO|rcsb pdb:5DAT|rcsb pdb:5DC3|rcsb pdb:5DGE|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5FL8|rcsb pdb:5GAK|rcsb pdb:5H4P|rcsb pdb:5I4L|rcsb pdb:5JCS|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:5JUT|rcsb pdb:5JUU|rcsb pdb:5LYB|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5MEI|rcsb pdb:5NDG|ensemblfungi:YBR031W_mRNA(transcript)|go:"GO:0002181"(cytoplasmic translation)|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:5ON6|rcsb pdb:5T62|rcsb pdb:5T6R|rcsb pdb:5TBW|rcsb pdb:5TGA|rcsb pdb:5TGM|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|dip:DIP-8314N|mint:P10664 - - crc64:37D0942A10AAE89F figure legend:Fig 1|comment:the deletion of aa 2-94 impairs the binding with RRP5 and UTP22|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:XvXRGElHYKmzuBussPOaCELEIZM559292 rigid:ZWhqWKXd1HwYnESqSIfQTMmWpcc false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q06106 uniprotkb:P42945 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-1884|uniprotkb:D6VW75|ensemblfungi:YJL109C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:utp10_yeast(display_long)|uniprotkb:UTP10(gene name)|psi-mi:UTP10(display_short)|uniprotkb:t-UTP10(gene name synonym)|uniprotkb:U three protein 10(gene name synonym)|uniprotkb:U3 protein 10 required for transcription(gene name synonym)|uniprotkb:J0808(orf name)|uniprotkb:YJL109C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660096|imex:IM-25106-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_012426.1|sgd:S000003645|dip:DIP-6466N|mint:P42945|ensemblfungi:YJL109C(gene)|ensemblfungi:YJL109C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032040"(small-subunit processome)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0034455"(t-UTP complex)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012954(BP28, C-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR022125|interpro:IPR040191|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:064480D1D249B241 figure legend:Fig 1 D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/22 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:c7sxmixQnRLFmjuUMDkqZ260ebg559292 rigid:0GFLmOmp8L0TYqjFyyDVSrYFsTU false calmodulin binding peptide plus protein a tag:c-c|necessary binding region:2-94 ha tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q06106 intact:EBI-10821555 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C rnacentral:URS00004BEF81_559292 psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:rrna 35s yeast(display_short)|psi-mi:EBI-10821555(display_long) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11664900|imex:IM-25106-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0608"(ribosomal rna) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 sgd:S000006486(see-also) - - - figure legend:Fig 1 C, Suppl S1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/31 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 - - false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0929"(northern blot) uniprotkb:Q06106 intact:EBI-10821792 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C rnacentral:URS0000444F9B_559292 psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:snru3a yeast(display_short)|psi-mi:EBI-10821792(display_long) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11664900|imex:IM-25106-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0607"(small nuclear rna) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 - - - - figure legend:Fig 1 C, Suppl S1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/31 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 - - false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0929"(northern blot) uniprotkb:Q06106 uniprotkb:P47083 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11664900|imex:IM-25106-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N - - crc64:DEAF52FC003A0FFD figure legend:Fig 1 C, Suppl S1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/31 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 - false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0421"(identification by antibody) uniprotkb:Q06106 uniprotkb:Q05022 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-16011|uniprotkb:D6W054|ensemblfungi:YMR229C psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:rrp5_yeast(display_long)|uniprotkb:RRP5(gene name)|psi-mi:RRP5(display_short)|uniprotkb:FMI1(gene name synonym)|uniprotkb:YMR229C(locus name)|uniprotkb:YM9959.11C(orf name)|uniprotkb:Ribosomal RNA-processing protein 5(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein RRP5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11664900|imex:IM-25106-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 refseq:NP_013956.1|sgd:S000004842|ensemblfungi:YMR229C(gene)|ensemblfungi:YMR229C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034463"(90S preribosome assembly)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0034513"(box H/ACA snoRNA binding)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR003029(S1, RNA binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR022967|rcsb pdb:5C9S|rcsb pdb:5NLG|rcsb pdb:5WLC|rcsb pdb:5WWM|rcsb pdb:5WYJ|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-6535N|mint:Q05022 - - crc64:39BF46E5587B3B0A figure legend:Fig 1 C, Suppl S1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/31 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:FUIsTk3NLRDu8llnVgX5cDLAbB8559292 - false calmodulin binding peptide plus protein a tag:c-c ha tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q06106 intact:EBI-10821792 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C rnacentral:URS0000444F9B_559292 psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:snru3a yeast(display_short)|psi-mi:EBI-10821792(display_long) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11664932|imex:IM-25106-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0607"(small nuclear rna) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 - - - - figure legend:Fig 1 C, Suppl Fig 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/31 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 - - false calmodulin binding peptide plus protein a tag:c-c|binding-associated region:2-94 - - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q06106 intact:EBI-10821555 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C rnacentral:URS00004BEF81_559292 psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:rrna 35s yeast(display_short)|psi-mi:EBI-10821555(display_long) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11664932|imex:IM-25106-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0608"(ribosomal rna) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 sgd:S000006486(see-also) - - - figure legend:Fig 1 C, Suppl Fig 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/31 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 - - false calmodulin binding peptide plus protein a tag:c-c|binding-associated region:2-94 - - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q06106 uniprotkb:P47083 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-11168|uniprotkb:D6VWH6|ensemblfungi:YJR002W psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:mpp10_yeast(display_long)|uniprotkb:MPP10(gene name)|psi-mi:MPP10(display_short)|uniprotkb:YJR002W(locus name)|uniprotkb:J1411(orf name)|uniprotkb:YJR83.5(orf name)|uniprotkb:M phase phosphoprotein 10(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11664932|imex:IM-25106-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 ensemblfungi:YJR002W(gene)|ensemblfungi:YJR002W_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034457"(Mpp10 complex)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5WLC|rcsb pdb:5WXM|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|interpro:IPR012173(U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p)|rcsb pdb:6ZQG|rcsb pdb:7AJU|reactome:R-SCE-6791226|rcsb pdb:7AJT|refseq:NP_012535.3|sgd:S000003762|mint:P47083|dip:DIP-4363N - - crc64:DEAF52FC003A0FFD figure legend:Fig 1 C, Suppl Fig 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/31 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:s50bZIHHvg5cuUYgW2irvrTnbsU559292 - false calmodulin binding peptide plus protein a tag:c-c|binding-associated region:2-94 - - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0421"(identification by antibody) uniprotkb:Q06106 uniprotkb:P53254 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C intact:EBI-1878|uniprotkb:D6VUM2|ensemblfungi:YGR090W psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:utp22_yeast(display_long)|uniprotkb:UTP22(gene name)|psi-mi:UTP22(display_short)|uniprotkb:U three protein 22(gene name synonym)|uniprotkb:YGR090W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11664944|imex:IM-25106-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 sgd:S000003322|refseq:NP_011604.3|dip:DIP-5304N|mint:P53254|ensemblfungi:YGR090W(gene)|ensemblfungi:YGR090W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0032545"(CURI complex)|go:"GO:0034456"(UTP-C complex)|interpro:IPR005554(Nrap protein)|interpro:IPR035082|interpro:IPR035367|interpro:IPR035368|interpro:IPR035369|interpro:IPR035370|interpro:IPR035371|rcsb pdb:4M5D|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:9A2B5C885493D7D3 figure legend:Fig 1 D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/22 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 rogid:9GhkwWJFkw55gOlcprisQdlDQSg559292 rigid:Pq8cFL5lb7SkikCIik3cJT5tSio false calmodulin binding peptide plus protein a tag:c-c|necessary binding region:2-94 ha tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q06106 intact:EBI-10821373 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C rnacentral:URS00005F2C2D_559292 psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:rrna 18s yeast(display_short)|psi-mi:EBI-10821373(display_long) psi-mi:"MI:2194"(crac) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11660155|imex:IM-25106-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0608"(ribosomal rna) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 - - - - figure legend:Fig 2, 3, 4, 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/18 2016/03/18 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 - - false tandem tag:c-c|sufficient binding region:1-604|necessary binding region:345-423 binding-associated region:1126-1126,1128-1128 - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) intact:EBI-10821373 uniprotkb:Q06106 rnacentral:URS00005F2C2D_559292 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C psi-mi:rrna 18s yeast(display_short)|psi-mi:EBI-10821373(display_long) psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:"MI:0049"(filter binding) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-11660212|imex:IM-25106-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0608"(ribosomal rna) psi-mi:"MI:0326"(protein) - refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 - - - figure legend:Fig 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2016/03/18 2016/03/19 - rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 - false sufficient binding region:1-600|32p radiolabel:?-?|sufficient binding region:577-1256 glutathione s tranferase tag:c-c - - psi-mi:"MI:0866"(tag visualisation) psi-mi:"MI:0866"(tag visualisation) intact:EBI-10821555 uniprotkb:Q06106 rnacentral:URS00004BEF81_559292 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C psi-mi:rrna 35s yeast(display_short)|psi-mi:EBI-10821555(display_long) psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:"MI:0049"(filter binding) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-11660221|imex:IM-25106-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0608"(ribosomal rna) psi-mi:"MI:0326"(protein) sgd:S000006486(see-also) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 - - - figure legend:Fig6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2016/03/18 2016/03/19 - rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 - false sufficient binding region:2501-2861|sufficient binding region:3020-3251|sufficient binding region:1-700 glutathione s tranferase tag:c-c - - psi-mi:"MI:0866"(tag visualisation) psi-mi:"MI:0866"(tag visualisation) uniprotkb:Q06106 intact:EBI-10903441 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C rnacentral:URS000061F377_559292 psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:rrna 25s yeast(display_short)|psi-mi:EBI-10903441(display_long) psi-mi:"MI:0049"(filter binding) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-11660231|imex:IM-25106-9 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0608"(ribosomal rna) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 - - - - figure legend:Fig 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2016/03/18 2016/03/19 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 - - false glutathione s tranferase tag:c-c 32p radiolabel:?-? - - psi-mi:"MI:0866"(tag visualisation) psi-mi:"MI:0866"(tag visualisation) uniprotkb:Q06106 intact:EBI-10903441 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C rnacentral:URS000061F377_559292 psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:rrna 25s yeast(display_short)|psi-mi:EBI-10903441(display_long) psi-mi:"MI:0049"(filter binding) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-11660241|imex:IM-25106-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0608"(ribosomal rna) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 - - - - figure legend:Fig 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2016/03/18 2016/03/19 rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 - - false his tag:n-n|sufficient binding region:2-604 32p radiolabel:?-? - - psi-mi:"MI:0866"(tag visualisation) psi-mi:"MI:0866"(tag visualisation) intact:EBI-10821373 uniprotkb:Q06106 rnacentral:URS00005F2C2D_559292 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C psi-mi:rrna 18s yeast(display_short)|psi-mi:EBI-10821373(display_long) psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:"MI:0049"(filter binding) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-11660265|imex:IM-25106-11 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0608"(ribosomal rna) psi-mi:"MI:0326"(protein) - refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 - - - figure legend:Fig 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2016/03/18 2016/03/19 - rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 - false sufficient binding region:1-600|32p radiolabel:?-?|sufficient binding region:577-1256 his tag:n-n|sufficient binding region:2-604 - - psi-mi:"MI:0866"(tag visualisation) psi-mi:"MI:0866"(tag visualisation) intact:EBI-10821555 uniprotkb:Q06106 rnacentral:URS00004BEF81_559292 intact:EBI-34383|uniprotkb:D6W4B1|ensemblfungi:YPR112C psi-mi:rrna 35s yeast(display_short)|psi-mi:EBI-10821555(display_long) psi-mi:mrd1_yeast(display_long)|uniprotkb:MRD1(gene name)|psi-mi:MRD1(display_short)|uniprotkb:YPR112C(locus name) psi-mi:"MI:0049"(filter binding) Segerstolpe et al. (2013) imex:IM-25106|pubmed:23193268 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-11660278|imex:IM-25106-12 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0608"(ribosomal rna) psi-mi:"MI:0326"(protein) sgd:S000006486(see-also) refseq:NP_015437.1|sgd:S000006316|mint:Q06106|dip:DIP-6281N|ensemblfungi:YPR112C(gene)|ensemblfungi:YPR112C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0030686"(90S preribosome)|go:"GO:0034462"(small-subunit processome assembly)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:1990904"(ribonucleoprotein complex)|go:"GO:2000815"(regulation of mRNA stability involved in response to oxidative stress)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034482|interpro:IPR035979 - - - figure legend:Fig6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2016/03/18 2016/03/19 - rogid:lxiLbphBLtIbn1mguvZN+kFF570559292 - false sufficient binding region:2501-2861|sufficient binding region:3020-3251 sufficient binding region:2-604|his tag:n-n - - psi-mi:"MI:0866"(tag visualisation) psi-mi:"MI:0866"(tag visualisation)