#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P53632 intact:EBI-11621275 intact:EBI-19517|uniprotkb:D6W1V2|ensemblfungi:YOL115W rnacentral:URS0000413C32_559292 psi-mi:pap2_yeast(display_long)|uniprotkb:TRF4(gene name synonym)|uniprotkb:HRC584(orf name)|uniprotkb:O0716(orf name)|uniprotkb:YOL115W(locus name)|uniprotkb:PAP2(gene name)|psi-mi:PAP2(display_short)|uniprotkb:DNA polymerase sigma(gene name synonym)|uniprotkb:DNA polymerase kappa(gene name synonym)|uniprotkb:Topoisomerase 1-related protein TRF4(gene name synonym) psi-mi:rpr1 yeast(display_short)|psi-mi:EBI-11621275(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665055|imex:IM-25117-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0320"(ribonucleic acid) refseq:NP_014526.1|sgd:S000005475|ensemblfungi:YOL115W(gene)|ensemblfungi:YOL115W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004652"(polynucleotide adenylyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006284"(base-excision repair)|go:"GO:0006400"(tRNA modification)|go:"GO:0031123"(RNA 3'-end processing)|go:"GO:0031499"(TRAMP complex)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0043629"(ncRNA polyadenylation)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051301"(cell division)|go:"GO:0051575"(5'-deoxyribose-5-phosphate lyase activity)|go:"GO:0071031"(nuclear mRNA surveillance of mRNA 3'-end processing)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071036"(nuclear polyadenylation-dependent snoRNA catabolic process)|go:"GO:0071037"(nuclear polyadenylation-dependent snRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071039"(nuclear polyadenylation-dependent CUT catabolic process)|go:"GO:0071040"(nuclear polyadenylation-dependent antisense transcript catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:0071047"(polyadenylation-dependent mRNA catabolic process)|go:"GO:0071050"("sno(s)RNA polyadenylation")|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR002058(PAP/25A-associated)|interpro:IPR002934(Nucleotidyltransferase)|interpro:IPR043519|rcsb pdb:2MOW|rcsb pdb:4U4C|rcsb pdb:3NYB|dip:DIP-4214N|mint:P53632 sgd:S000006490(see-also) - crc64:8A58B29E4BFDC022 - figure legend:Fig 3, Fig 4, Fig 6, Suppl Fig 1, 3, 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:ndWhFobdQrq5tf9WBXuA09dyMA0559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53632 intact:EBI-11668572 intact:EBI-19517|uniprotkb:D6W1V2|ensemblfungi:YOL115W genbank identifier:NM_001183089 psi-mi:pap2_yeast(display_long)|uniprotkb:TRF4(gene name synonym)|uniprotkb:HRC584(orf name)|uniprotkb:O0716(orf name)|uniprotkb:YOL115W(locus name)|uniprotkb:PAP2(gene name)|psi-mi:PAP2(display_short)|uniprotkb:DNA polymerase sigma(gene name synonym)|uniprotkb:DNA polymerase kappa(gene name synonym)|uniprotkb:Topoisomerase 1-related protein TRF4(gene name synonym) psi-mi:nrd1 mrna(display_short)|psi-mi:EBI-11668572(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665055|imex:IM-25117-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0324"(messenger rna) refseq:NP_014526.1|sgd:S000005475|ensemblfungi:YOL115W(gene)|ensemblfungi:YOL115W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004652"(polynucleotide adenylyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006284"(base-excision repair)|go:"GO:0006400"(tRNA modification)|go:"GO:0031123"(RNA 3'-end processing)|go:"GO:0031499"(TRAMP complex)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0043629"(ncRNA polyadenylation)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051301"(cell division)|go:"GO:0051575"(5'-deoxyribose-5-phosphate lyase activity)|go:"GO:0071031"(nuclear mRNA surveillance of mRNA 3'-end processing)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071036"(nuclear polyadenylation-dependent snoRNA catabolic process)|go:"GO:0071037"(nuclear polyadenylation-dependent snRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071039"(nuclear polyadenylation-dependent CUT catabolic process)|go:"GO:0071040"(nuclear polyadenylation-dependent antisense transcript catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:0071047"(polyadenylation-dependent mRNA catabolic process)|go:"GO:0071050"("sno(s)RNA polyadenylation")|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR002058(PAP/25A-associated)|interpro:IPR002934(Nucleotidyltransferase)|interpro:IPR043519|rcsb pdb:2MOW|rcsb pdb:4U4C|rcsb pdb:3NYB|dip:DIP-4214N|mint:P53632 - - crc64:8A58B29E4BFDC022 - figure legend:Fig 3, Fig 4, Fig 6, Suppl Fig 1, 3, 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:ndWhFobdQrq5tf9WBXuA09dyMA0559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53632 intact:EBI-10824860 intact:EBI-19517|uniprotkb:D6W1V2|ensemblfungi:YOL115W rnacentral:URS00000E463C_559292 psi-mi:pap2_yeast(display_long)|uniprotkb:TRF4(gene name synonym)|uniprotkb:HRC584(orf name)|uniprotkb:O0716(orf name)|uniprotkb:YOL115W(locus name)|uniprotkb:PAP2(gene name)|psi-mi:PAP2(display_short)|uniprotkb:DNA polymerase sigma(gene name synonym)|uniprotkb:DNA polymerase kappa(gene name synonym)|uniprotkb:Topoisomerase 1-related protein TRF4(gene name synonym) psi-mi:snr3 yeast(display_short)|psi-mi:EBI-10824860(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665055|imex:IM-25117-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) refseq:NP_014526.1|sgd:S000005475|ensemblfungi:YOL115W(gene)|ensemblfungi:YOL115W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004652"(polynucleotide adenylyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006284"(base-excision repair)|go:"GO:0006400"(tRNA modification)|go:"GO:0031123"(RNA 3'-end processing)|go:"GO:0031499"(TRAMP complex)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0043629"(ncRNA polyadenylation)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051301"(cell division)|go:"GO:0051575"(5'-deoxyribose-5-phosphate lyase activity)|go:"GO:0071031"(nuclear mRNA surveillance of mRNA 3'-end processing)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071036"(nuclear polyadenylation-dependent snoRNA catabolic process)|go:"GO:0071037"(nuclear polyadenylation-dependent snRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071039"(nuclear polyadenylation-dependent CUT catabolic process)|go:"GO:0071040"(nuclear polyadenylation-dependent antisense transcript catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:0071047"(polyadenylation-dependent mRNA catabolic process)|go:"GO:0071050"("sno(s)RNA polyadenylation")|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR002058(PAP/25A-associated)|interpro:IPR002934(Nucleotidyltransferase)|interpro:IPR043519|rcsb pdb:2MOW|rcsb pdb:4U4C|rcsb pdb:3NYB|dip:DIP-4214N|mint:P53632 - - crc64:8A58B29E4BFDC022 - figure legend:Fig 3, Fig 4, Fig 6, Suppl Fig 1, 3, 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:ndWhFobdQrq5tf9WBXuA09dyMA0559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53632 intact:EBI-10825186 intact:EBI-19517|uniprotkb:D6W1V2|ensemblfungi:YOL115W rnacentral:URS000055688D_559292 psi-mi:pap2_yeast(display_long)|uniprotkb:TRF4(gene name synonym)|uniprotkb:HRC584(orf name)|uniprotkb:O0716(orf name)|uniprotkb:YOL115W(locus name)|uniprotkb:PAP2(gene name)|psi-mi:PAP2(display_short)|uniprotkb:DNA polymerase sigma(gene name synonym)|uniprotkb:DNA polymerase kappa(gene name synonym)|uniprotkb:Topoisomerase 1-related protein TRF4(gene name synonym) psi-mi:rrna 5s yeast(display_short)|psi-mi:EBI-10825186(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665055|imex:IM-25117-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0608"(ribosomal rna) refseq:NP_014526.1|sgd:S000005475|ensemblfungi:YOL115W(gene)|ensemblfungi:YOL115W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004652"(polynucleotide adenylyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006284"(base-excision repair)|go:"GO:0006400"(tRNA modification)|go:"GO:0031123"(RNA 3'-end processing)|go:"GO:0031499"(TRAMP complex)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0043629"(ncRNA polyadenylation)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051301"(cell division)|go:"GO:0051575"(5'-deoxyribose-5-phosphate lyase activity)|go:"GO:0071031"(nuclear mRNA surveillance of mRNA 3'-end processing)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071036"(nuclear polyadenylation-dependent snoRNA catabolic process)|go:"GO:0071037"(nuclear polyadenylation-dependent snRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071039"(nuclear polyadenylation-dependent CUT catabolic process)|go:"GO:0071040"(nuclear polyadenylation-dependent antisense transcript catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:0071047"(polyadenylation-dependent mRNA catabolic process)|go:"GO:0071050"("sno(s)RNA polyadenylation")|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR002058(PAP/25A-associated)|interpro:IPR002934(Nucleotidyltransferase)|interpro:IPR043519|rcsb pdb:2MOW|rcsb pdb:4U4C|rcsb pdb:3NYB|dip:DIP-4214N|mint:P53632 - - crc64:8A58B29E4BFDC022 - figure legend:Fig 3, Fig 4, Fig 6, Suppl Fig 1, 3, 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:ndWhFobdQrq5tf9WBXuA09dyMA0559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53632 intact:EBI-10922160 intact:EBI-19517|uniprotkb:D6W1V2|ensemblfungi:YOL115W rnacentral:URS00004957CB_559292 psi-mi:pap2_yeast(display_long)|uniprotkb:TRF4(gene name synonym)|uniprotkb:HRC584(orf name)|uniprotkb:O0716(orf name)|uniprotkb:YOL115W(locus name)|uniprotkb:PAP2(gene name)|psi-mi:PAP2(display_short)|uniprotkb:DNA polymerase sigma(gene name synonym)|uniprotkb:DNA polymerase kappa(gene name synonym)|uniprotkb:Topoisomerase 1-related protein TRF4(gene name synonym) psi-mi:snr13 yeast(display_short)|psi-mi:EBI-10922160(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665055|imex:IM-25117-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) refseq:NP_014526.1|sgd:S000005475|ensemblfungi:YOL115W(gene)|ensemblfungi:YOL115W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004652"(polynucleotide adenylyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006284"(base-excision repair)|go:"GO:0006400"(tRNA modification)|go:"GO:0031123"(RNA 3'-end processing)|go:"GO:0031499"(TRAMP complex)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0043629"(ncRNA polyadenylation)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051301"(cell division)|go:"GO:0051575"(5'-deoxyribose-5-phosphate lyase activity)|go:"GO:0071031"(nuclear mRNA surveillance of mRNA 3'-end processing)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071036"(nuclear polyadenylation-dependent snoRNA catabolic process)|go:"GO:0071037"(nuclear polyadenylation-dependent snRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071039"(nuclear polyadenylation-dependent CUT catabolic process)|go:"GO:0071040"(nuclear polyadenylation-dependent antisense transcript catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:0071047"(polyadenylation-dependent mRNA catabolic process)|go:"GO:0071050"("sno(s)RNA polyadenylation")|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR002058(PAP/25A-associated)|interpro:IPR002934(Nucleotidyltransferase)|interpro:IPR043519|rcsb pdb:2MOW|rcsb pdb:4U4C|rcsb pdb:3NYB|dip:DIP-4214N|mint:P53632 - - crc64:8A58B29E4BFDC022 - figure legend:Fig 3, Fig 4, Fig 6, Suppl Fig 1, 3, 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:ndWhFobdQrq5tf9WBXuA09dyMA0559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53632 intact:EBI-10821555 intact:EBI-19517|uniprotkb:D6W1V2|ensemblfungi:YOL115W rnacentral:URS00004BEF81_559292 psi-mi:pap2_yeast(display_long)|uniprotkb:TRF4(gene name synonym)|uniprotkb:HRC584(orf name)|uniprotkb:O0716(orf name)|uniprotkb:YOL115W(locus name)|uniprotkb:PAP2(gene name)|psi-mi:PAP2(display_short)|uniprotkb:DNA polymerase sigma(gene name synonym)|uniprotkb:DNA polymerase kappa(gene name synonym)|uniprotkb:Topoisomerase 1-related protein TRF4(gene name synonym) psi-mi:rrna 35s yeast(display_short)|psi-mi:EBI-10821555(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665055|imex:IM-25117-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0608"(ribosomal rna) refseq:NP_014526.1|sgd:S000005475|ensemblfungi:YOL115W(gene)|ensemblfungi:YOL115W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004652"(polynucleotide adenylyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006284"(base-excision repair)|go:"GO:0006400"(tRNA modification)|go:"GO:0031123"(RNA 3'-end processing)|go:"GO:0031499"(TRAMP complex)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0043629"(ncRNA polyadenylation)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051301"(cell division)|go:"GO:0051575"(5'-deoxyribose-5-phosphate lyase activity)|go:"GO:0071031"(nuclear mRNA surveillance of mRNA 3'-end processing)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071036"(nuclear polyadenylation-dependent snoRNA catabolic process)|go:"GO:0071037"(nuclear polyadenylation-dependent snRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071039"(nuclear polyadenylation-dependent CUT catabolic process)|go:"GO:0071040"(nuclear polyadenylation-dependent antisense transcript catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:0071047"(polyadenylation-dependent mRNA catabolic process)|go:"GO:0071050"("sno(s)RNA polyadenylation")|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR002058(PAP/25A-associated)|interpro:IPR002934(Nucleotidyltransferase)|interpro:IPR043519|rcsb pdb:2MOW|rcsb pdb:4U4C|rcsb pdb:3NYB|dip:DIP-4214N|mint:P53632 sgd:S000006486(see-also) - crc64:8A58B29E4BFDC022 - figure legend:Fig 3, Fig 4, Fig 6, Suppl Fig 1, 3, 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:ndWhFobdQrq5tf9WBXuA09dyMA0559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53632 intact:EBI-10821373 intact:EBI-19517|uniprotkb:D6W1V2|ensemblfungi:YOL115W rnacentral:URS00005F2C2D_559292 psi-mi:pap2_yeast(display_long)|uniprotkb:TRF4(gene name synonym)|uniprotkb:HRC584(orf name)|uniprotkb:O0716(orf name)|uniprotkb:YOL115W(locus name)|uniprotkb:PAP2(gene name)|psi-mi:PAP2(display_short)|uniprotkb:DNA polymerase sigma(gene name synonym)|uniprotkb:DNA polymerase kappa(gene name synonym)|uniprotkb:Topoisomerase 1-related protein TRF4(gene name synonym) psi-mi:rrna 18s yeast(display_short)|psi-mi:EBI-10821373(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665055|imex:IM-25117-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0608"(ribosomal rna) refseq:NP_014526.1|sgd:S000005475|ensemblfungi:YOL115W(gene)|ensemblfungi:YOL115W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004652"(polynucleotide adenylyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006284"(base-excision repair)|go:"GO:0006400"(tRNA modification)|go:"GO:0031123"(RNA 3'-end processing)|go:"GO:0031499"(TRAMP complex)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0043629"(ncRNA polyadenylation)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051301"(cell division)|go:"GO:0051575"(5'-deoxyribose-5-phosphate lyase activity)|go:"GO:0071031"(nuclear mRNA surveillance of mRNA 3'-end processing)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071036"(nuclear polyadenylation-dependent snoRNA catabolic process)|go:"GO:0071037"(nuclear polyadenylation-dependent snRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071039"(nuclear polyadenylation-dependent CUT catabolic process)|go:"GO:0071040"(nuclear polyadenylation-dependent antisense transcript catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:0071047"(polyadenylation-dependent mRNA catabolic process)|go:"GO:0071050"("sno(s)RNA polyadenylation")|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR002058(PAP/25A-associated)|interpro:IPR002934(Nucleotidyltransferase)|interpro:IPR043519|rcsb pdb:2MOW|rcsb pdb:4U4C|rcsb pdb:3NYB|dip:DIP-4214N|mint:P53632 - - crc64:8A58B29E4BFDC022 - figure legend:Fig 3, Fig 4, Fig 6, Suppl Fig 1, 3, 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:ndWhFobdQrq5tf9WBXuA09dyMA0559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53632 intact:EBI-11668757 intact:EBI-19517|uniprotkb:D6W1V2|ensemblfungi:YOL115W genbank identifier:NM_001181485 psi-mi:pap2_yeast(display_long)|uniprotkb:TRF4(gene name synonym)|uniprotkb:HRC584(orf name)|uniprotkb:O0716(orf name)|uniprotkb:YOL115W(locus name)|uniprotkb:PAP2(gene name)|psi-mi:PAP2(display_short)|uniprotkb:DNA polymerase sigma(gene name synonym)|uniprotkb:DNA polymerase kappa(gene name synonym)|uniprotkb:Topoisomerase 1-related protein TRF4(gene name synonym) psi-mi:tdh1 mrna yeast(display_short)|psi-mi:EBI-11668757(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665055|imex:IM-25117-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0324"(messenger rna) refseq:NP_014526.1|sgd:S000005475|ensemblfungi:YOL115W(gene)|ensemblfungi:YOL115W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004652"(polynucleotide adenylyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006284"(base-excision repair)|go:"GO:0006400"(tRNA modification)|go:"GO:0031123"(RNA 3'-end processing)|go:"GO:0031499"(TRAMP complex)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0043629"(ncRNA polyadenylation)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051301"(cell division)|go:"GO:0051575"(5'-deoxyribose-5-phosphate lyase activity)|go:"GO:0071031"(nuclear mRNA surveillance of mRNA 3'-end processing)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071036"(nuclear polyadenylation-dependent snoRNA catabolic process)|go:"GO:0071037"(nuclear polyadenylation-dependent snRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071039"(nuclear polyadenylation-dependent CUT catabolic process)|go:"GO:0071040"(nuclear polyadenylation-dependent antisense transcript catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:0071047"(polyadenylation-dependent mRNA catabolic process)|go:"GO:0071050"("sno(s)RNA polyadenylation")|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR002058(PAP/25A-associated)|interpro:IPR002934(Nucleotidyltransferase)|interpro:IPR043519|rcsb pdb:2MOW|rcsb pdb:4U4C|rcsb pdb:3NYB|dip:DIP-4214N|mint:P53632 - - crc64:8A58B29E4BFDC022 - figure legend:Fig 3, Fig 4, Fig 6, Suppl Fig 1, 3, 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:ndWhFobdQrq5tf9WBXuA09dyMA0559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53632 intact:EBI-11668758 intact:EBI-19517|uniprotkb:D6W1V2|ensemblfungi:YOL115W genbank identifier:NM_001178725.1 psi-mi:pap2_yeast(display_long)|uniprotkb:TRF4(gene name synonym)|uniprotkb:HRC584(orf name)|uniprotkb:O0716(orf name)|uniprotkb:YOL115W(locus name)|uniprotkb:PAP2(gene name)|psi-mi:PAP2(display_short)|uniprotkb:DNA polymerase sigma(gene name synonym)|uniprotkb:DNA polymerase kappa(gene name synonym)|uniprotkb:Topoisomerase 1-related protein TRF4(gene name synonym) psi-mi:pgk1 mrna yeast(display_short)|psi-mi:EBI-11668758(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665055|imex:IM-25117-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0324"(messenger rna) refseq:NP_014526.1|sgd:S000005475|ensemblfungi:YOL115W(gene)|ensemblfungi:YOL115W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004652"(polynucleotide adenylyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006284"(base-excision repair)|go:"GO:0006400"(tRNA modification)|go:"GO:0031123"(RNA 3'-end processing)|go:"GO:0031499"(TRAMP complex)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0043629"(ncRNA polyadenylation)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051301"(cell division)|go:"GO:0051575"(5'-deoxyribose-5-phosphate lyase activity)|go:"GO:0071031"(nuclear mRNA surveillance of mRNA 3'-end processing)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071036"(nuclear polyadenylation-dependent snoRNA catabolic process)|go:"GO:0071037"(nuclear polyadenylation-dependent snRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071039"(nuclear polyadenylation-dependent CUT catabolic process)|go:"GO:0071040"(nuclear polyadenylation-dependent antisense transcript catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:0071047"(polyadenylation-dependent mRNA catabolic process)|go:"GO:0071050"("sno(s)RNA polyadenylation")|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR002058(PAP/25A-associated)|interpro:IPR002934(Nucleotidyltransferase)|interpro:IPR043519|rcsb pdb:2MOW|rcsb pdb:4U4C|rcsb pdb:3NYB|dip:DIP-4214N|mint:P53632 - - crc64:8A58B29E4BFDC022 - figure legend:Fig 3, Fig 4, Fig 6, Suppl Fig 1, 3, 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:ndWhFobdQrq5tf9WBXuA09dyMA0559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53632 intact:EBI-11666747 intact:EBI-19517|uniprotkb:D6W1V2|ensemblfungi:YOL115W rnacentral:URS00001C0676_559292 psi-mi:pap2_yeast(display_long)|uniprotkb:TRF4(gene name synonym)|uniprotkb:HRC584(orf name)|uniprotkb:O0716(orf name)|uniprotkb:YOL115W(locus name)|uniprotkb:PAP2(gene name)|psi-mi:PAP2(display_short)|uniprotkb:DNA polymerase sigma(gene name synonym)|uniprotkb:DNA polymerase kappa(gene name synonym)|uniprotkb:Topoisomerase 1-related protein TRF4(gene name synonym) psi-mi:srg1 yeast(display_short)|psi-mi:EBI-11666747(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665055|imex:IM-25117-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:2190"(long non-coding ribonucleic acid) refseq:NP_014526.1|sgd:S000005475|ensemblfungi:YOL115W(gene)|ensemblfungi:YOL115W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004652"(polynucleotide adenylyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006284"(base-excision repair)|go:"GO:0006400"(tRNA modification)|go:"GO:0031123"(RNA 3'-end processing)|go:"GO:0031499"(TRAMP complex)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0043629"(ncRNA polyadenylation)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051301"(cell division)|go:"GO:0051575"(5'-deoxyribose-5-phosphate lyase activity)|go:"GO:0071031"(nuclear mRNA surveillance of mRNA 3'-end processing)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071036"(nuclear polyadenylation-dependent snoRNA catabolic process)|go:"GO:0071037"(nuclear polyadenylation-dependent snRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071039"(nuclear polyadenylation-dependent CUT catabolic process)|go:"GO:0071040"(nuclear polyadenylation-dependent antisense transcript catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:0071047"(polyadenylation-dependent mRNA catabolic process)|go:"GO:0071050"("sno(s)RNA polyadenylation")|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR002058(PAP/25A-associated)|interpro:IPR002934(Nucleotidyltransferase)|interpro:IPR043519|rcsb pdb:2MOW|rcsb pdb:4U4C|rcsb pdb:3NYB|dip:DIP-4214N|mint:P53632 sgd:S000029010(see-also) - crc64:8A58B29E4BFDC022 - figure legend:Fig 3, Fig 4, Fig 6, Suppl Fig 1, 3, 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:ndWhFobdQrq5tf9WBXuA09dyMA0559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53632 intact:EBI-11666754 intact:EBI-19517|uniprotkb:D6W1V2|ensemblfungi:YOL115W genbank identifier:NM_001182022 psi-mi:pap2_yeast(display_long)|uniprotkb:TRF4(gene name synonym)|uniprotkb:HRC584(orf name)|uniprotkb:O0716(orf name)|uniprotkb:YOL115W(locus name)|uniprotkb:PAP2(gene name)|psi-mi:PAP2(display_short)|uniprotkb:DNA polymerase sigma(gene name synonym)|uniprotkb:DNA polymerase kappa(gene name synonym)|uniprotkb:Topoisomerase 1-related protein TRF4(gene name synonym) psi-mi:slx4 mrna(display_short)|psi-mi:EBI-11666754(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665055|imex:IM-25117-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0324"(messenger rna) refseq:NP_014526.1|sgd:S000005475|ensemblfungi:YOL115W(gene)|ensemblfungi:YOL115W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004652"(polynucleotide adenylyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006284"(base-excision repair)|go:"GO:0006400"(tRNA modification)|go:"GO:0031123"(RNA 3'-end processing)|go:"GO:0031499"(TRAMP complex)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0043629"(ncRNA polyadenylation)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051301"(cell division)|go:"GO:0051575"(5'-deoxyribose-5-phosphate lyase activity)|go:"GO:0071031"(nuclear mRNA surveillance of mRNA 3'-end processing)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071036"(nuclear polyadenylation-dependent snoRNA catabolic process)|go:"GO:0071037"(nuclear polyadenylation-dependent snRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071039"(nuclear polyadenylation-dependent CUT catabolic process)|go:"GO:0071040"(nuclear polyadenylation-dependent antisense transcript catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:0071047"(polyadenylation-dependent mRNA catabolic process)|go:"GO:0071050"("sno(s)RNA polyadenylation")|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR002058(PAP/25A-associated)|interpro:IPR002934(Nucleotidyltransferase)|interpro:IPR043519|rcsb pdb:2MOW|rcsb pdb:4U4C|rcsb pdb:3NYB|dip:DIP-4214N|mint:P53632 - - crc64:8A58B29E4BFDC022 - figure legend:Fig 3, Fig 4, Fig 6, Suppl Fig 1, 3, 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:ndWhFobdQrq5tf9WBXuA09dyMA0559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-11681775 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS00000804B3_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:trna arg acg(display_short)|psi-mi:EBI-11681775(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-11668572 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 genbank identifier:NM_001183089 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:nrd1 mrna(display_short)|psi-mi:EBI-11668572(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0324"(messenger rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-11621275 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS0000413C32_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:rpr1 yeast(display_short)|psi-mi:EBI-11621275(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0320"(ribonucleic acid) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N sgd:S000006490(see-also) - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-10825186 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS000055688D_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:rrna 5s yeast(display_short)|psi-mi:EBI-10825186(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0608"(ribosomal rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-10922160 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS00004957CB_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:snr13 yeast(display_short)|psi-mi:EBI-10922160(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-10903441 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS000061F377_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:rrna 25s yeast(display_short)|psi-mi:EBI-10903441(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0608"(ribosomal rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-11681762 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS0000410E6D_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:trna lys cuu(display_short)|psi-mi:EBI-11681762(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-11681759 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS00004D1EAE_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:trna ala agc(display_short)|psi-mi:EBI-11681759(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-11668758 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 genbank identifier:NM_001178725.1 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:pgk1 mrna yeast(display_short)|psi-mi:EBI-11668758(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0324"(messenger rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-11668757 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 genbank identifier:NM_001181485 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:tdh1 mrna yeast(display_short)|psi-mi:EBI-11668757(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0324"(messenger rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-11666754 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 genbank identifier:NM_001182022 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:slx4 mrna(display_short)|psi-mi:EBI-11666754(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0324"(messenger rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-11681769 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS000044A924_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:trna gln uug(display_short)|psi-mi:EBI-11681769(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-11681771 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS0000246DB7_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:trna arg ucu(display_short)|psi-mi:EBI-11681771(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-10824860 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS00000E463C_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:snr3 yeast(display_short)|psi-mi:EBI-10824860(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N - - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P53617 intact:EBI-11666747 intact:EBI-12228|ensemblfungi:YNL251C|uniprotkb:D6W0U2 rnacentral:URS00001C0676_559292 psi-mi:nrd1_yeast(display_long)|uniprotkb:N0868(orf name)|uniprotkb:YNL251C(locus name)|uniprotkb:NRD1(gene name)|psi-mi:NRD1(display_short) psi-mi:srg1 yeast(display_short)|psi-mi:EBI-11666747(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665061|imex:IM-25117-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:2190"(long non-coding ribonucleic acid) ensemblfungi:YNL251C(gene)|ensemblfungi:YNL251C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034894|interpro:IPR035979|rcsb pdb:2LO6|rcsb pdb:2M88|rcsb pdb:2MOW|rcsb pdb:3CLJ|rcsb pdb:5O1T|rcsb pdb:5O1W|rcsb pdb:5O1X|rcsb pdb:5O1Y|rcsb pdb:5O1Z|rcsb pdb:5O20|rcsb pdb:6GC3|rcsb pdb:6O3W|rcsb pdb:6O3X|rcsb pdb:6O3Y|refseq:NP_014148.1|sgd:S000005195|mint:P53617|dip:DIP-6778N sgd:S000029010(see-also) - crc64:75082BDB0C42AE37 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:FJJxQtZfVVwYERLXtGkq6cJ9I1U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-11681769 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS000044A924_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:trna gln uug(display_short)|psi-mi:EBI-11681769(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-11681771 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS0000246DB7_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:trna arg ucu(display_short)|psi-mi:EBI-11681771(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-11668572 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 genbank identifier:NM_001183089 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:nrd1 mrna(display_short)|psi-mi:EBI-11668572(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0324"(messenger rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c sufficient binding region:?-? - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-11621275 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS0000413C32_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:rpr1 yeast(display_short)|psi-mi:EBI-11621275(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0320"(ribonucleic acid) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N sgd:S000006490(see-also) - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-10825186 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS000055688D_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:rrna 5s yeast(display_short)|psi-mi:EBI-10825186(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0608"(ribosomal rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-10922160 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS00004957CB_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:snr13 yeast(display_short)|psi-mi:EBI-10922160(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-10821373 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS00005F2C2D_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:rrna 18s yeast(display_short)|psi-mi:EBI-10821373(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0608"(ribosomal rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-10903441 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS000061F377_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:rrna 25s yeast(display_short)|psi-mi:EBI-10903441(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0608"(ribosomal rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-11681759 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS00004D1EAE_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:trna ala agc(display_short)|psi-mi:EBI-11681759(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-11681762 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS0000410E6D_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:trna lys cuu(display_short)|psi-mi:EBI-11681762(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-11666747 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS00001C0676_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:srg1 yeast(display_short)|psi-mi:EBI-11666747(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:2190"(long non-coding ribonucleic acid) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N sgd:S000029010(see-also) - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-11681775 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS00000804B3_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:trna arg acg(display_short)|psi-mi:EBI-11681775(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0325"(transfer rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-11666765 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 ensembl:YLR136C|genbank identifier:NM_001182023 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:cth2 yeast(display_short)|psi-mi:EBI-11666765(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0324"(messenger rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-11668758 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 genbank identifier:NM_001178725.1 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:pgk1 mrna yeast(display_short)|psi-mi:EBI-11668758(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0324"(messenger rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-11668757 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 genbank identifier:NM_001181485 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:tdh1 mrna yeast(display_short)|psi-mi:EBI-11668757(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0324"(messenger rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization) uniprotkb:P38996 intact:EBI-10824860 intact:EBI-11776|uniprotkb:Q07034|ensemblfungi:YPL190C|uniprotkb:D6W3H8 rnacentral:URS00000E463C_559292 psi-mi:nab3_yeast(display_long)|uniprotkb:YPL190C(locus name)|uniprotkb:NAB3(gene name)|psi-mi:NAB3(display_short)|uniprotkb:HMD1(gene name synonym) psi-mi:snr3 yeast(display_short)|psi-mi:EBI-10824860(display_long) psi-mi:"MI:2194"(crac) Wlotzka et al. (2011) pubmed:21460797|imex:IM-25117 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11665065|imex:IM-25117-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0609"(small nucleolar rna) interpro:IPR036621|rcsb pdb:2KVI|rcsb pdb:2L41|interpro:IPR035979|rcsb pdb:2XNQ|rcsb pdb:2XNR|ensemblfungi:YPL190C(gene)|ensemblfungi:YPL190C_mRNA(transcript)|go:"GO:0001068"(transcription regulatory region RNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0034472"(snRNA 3'-end processing)|go:"GO:0035649"(Nrd1 complex)|go:"GO:0042780"(tRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071041"(antisense RNA transcript catabolic process)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034167|refseq:NP_015134.1|sgd:S000006111|mint:P38996|dip:DIP-3980N - - crc64:CD6D2C7F24A44993 - figure legend:Fig 3, 6, 7, Suppl Fig 1, 3, 5, 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2016/03/21 2016/04/14 rogid:iVBA824UReQJmvua7xganVlrm9U559292 - - false tandem tag:c-c - - - psi-mi:"MI:0080"(partial dna sequence identification by hybridization) psi-mi:"MI:0080"(partial dna sequence identification by hybridization)