#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q8C0J2-2 uniprotkb:Q99J83 intact:EBI-11580812|ensembl:ENSMUSP00000108811 intact:EBI-2911848|ensembl:ENSMUSP00000044769 psi-mi:q8c0j2-2(display_long)|uniprotkb:APG16-like 1(gene name synonym)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym)|uniprotkb:Apg16Lalpha(isoform synonym) psi-mi:atg5_mouse(display_long)|uniprotkb:Atg5(gene name)|psi-mi:Atg5(display_short)|uniprotkb:Apg5l(gene name synonym)|uniprotkb:APG5-like(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11580819|imex:IM-25011-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-769195(isoform-parent)|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000113186(transcript) ensembl:ENSMUSG00000038160(gene)|ensembl:ENSMUST00000039286(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001974"(blood vessel remodeling)|go:"GO:0002718"(regulation of cytokine production involved in immune response)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019883"(antigen processing and presentation of endogenous antigen)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0009620"(response to fungus)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0035973"(aggrephagy)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042311"(vasodilation)|go:"GO:0042493"|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045060"(negative thymic T cell selection)|go:"GO:0048840"(otolith development)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060047"(heart contraction)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0070257"(positive regulation of mucus secretion)|go:"GO:0071500"(cellular response to nitrosative stress)|go:"GO:0075044"(positive regulation by symbiont of host autophagy)|go:"GO:1902017"(regulation of cilium assembly)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000619"(negative regulation of histone H4-K16 acetylation)|interpro:IPR007239(Autophagy protein 5)|interpro:IPR042526|interpro:IPR042527|mint:Q99J83|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|refseq:XP_011241410.1|refseq:NP_444299.1|refseq:NP_001300942.1|dip:DIP-46420N - isoform-comment:No experimental confirmation available. - figure legend:Fig. 4a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-hela)|taxid:9606(Homo sapiens epitheloid cervix carcinoma cells) - 2016/02/12 2016/02/29 rogid:iMylVRLTFl3kokX04TVsmPqCMlg10090 rogid:XNYb541lnGe1mjdDHei6DNhiNfk10090 rigid:7nHPDwehHqL0ZJwJyoRJnX0wMtw false flag tag:n-n ha tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q8C0J2-2 uniprotkb:O94817 intact:EBI-11580812|ensembl:ENSMUSP00000108811 intact:EBI-746742|uniprotkb:Q6PJV2|ensembl:ENSP00000425107 psi-mi:q8c0j2-2(display_long)|uniprotkb:APG16-like 1(gene name synonym)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym)|uniprotkb:Apg16Lalpha(isoform synonym) psi-mi:atg12_human(display_long)|uniprotkb:Autophagy-related protein 12(gene name synonym)|uniprotkb:ATG12(gene name)|psi-mi:ATG12(display_short)|uniprotkb:APG12(gene name synonym)|uniprotkb:APG12L(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11580819|imex:IM-25011-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-769195(isoform-parent)|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000113186(transcript) reactome:R-HSA-1632852|reactome:R-HSA-5205685|reactome:R-HSA-8934903|reactome:R-HSA-936440|refseq:NP_004698.3|ensembl:ENSG00000145782(gene)|ensembl:ENST00000509910(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0044804"(autophagy of nucleus)|interpro:IPR007242(Autophagy protein 12)|interpro:IPR029071|rcsb pdb:4GDK|rcsb pdb:4GDL|rcsb pdb:4NAW|refseq:NP_001264712.1|dip:DIP-46466N - isoform-comment:No experimental confirmation available. - figure legend:Fig. 4a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-hela)|taxid:9606(Homo sapiens epitheloid cervix carcinoma cells) - 2016/02/12 2016/02/29 rogid:iMylVRLTFl3kokX04TVsmPqCMlg10090 rogid:V+K93xoWUNtOTJk4k03IP+Q+HfA9606 rigid:7nHPDwehHqL0ZJwJyoRJnX0wMtw false flag tag:n-n binding-associated region:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q8C0J2-2 uniprotkb:Q99J83 intact:EBI-11580812|ensembl:ENSMUSP00000108811 intact:EBI-2911848|ensembl:ENSMUSP00000044769 psi-mi:q8c0j2-2(display_long)|uniprotkb:APG16-like 1(gene name synonym)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym)|uniprotkb:Apg16Lalpha(isoform synonym) psi-mi:atg5_mouse(display_long)|uniprotkb:Atg5(gene name)|psi-mi:Atg5(display_short)|uniprotkb:Apg5l(gene name synonym)|uniprotkb:APG5-like(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11580819|imex:IM-25011-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-769195(isoform-parent)|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000113186(transcript) ensembl:ENSMUSG00000038160(gene)|ensembl:ENSMUST00000039286(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001974"(blood vessel remodeling)|go:"GO:0002718"(regulation of cytokine production involved in immune response)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019883"(antigen processing and presentation of endogenous antigen)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0009620"(response to fungus)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0035973"(aggrephagy)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042311"(vasodilation)|go:"GO:0042493"|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045060"(negative thymic T cell selection)|go:"GO:0048840"(otolith development)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060047"(heart contraction)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0070257"(positive regulation of mucus secretion)|go:"GO:0071500"(cellular response to nitrosative stress)|go:"GO:0075044"(positive regulation by symbiont of host autophagy)|go:"GO:1902017"(regulation of cilium assembly)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000619"(negative regulation of histone H4-K16 acetylation)|interpro:IPR007239(Autophagy protein 5)|interpro:IPR042526|interpro:IPR042527|mint:Q99J83|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|refseq:XP_011241410.1|refseq:NP_444299.1|refseq:NP_001300942.1|dip:DIP-46420N - isoform-comment:No experimental confirmation available. - figure legend:Fig. 4a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-hela)|taxid:9606(Homo sapiens epitheloid cervix carcinoma cells) - 2016/02/12 2016/02/29 rogid:iMylVRLTFl3kokX04TVsmPqCMlg10090 rogid:XNYb541lnGe1mjdDHei6DNhiNfk10090 rigid:7nHPDwehHqL0ZJwJyoRJnX0wMtw false flag tag:n-n binding-associated region:?-?|ha tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q99J83 uniprotkb:O94817 intact:EBI-2911848|ensembl:ENSMUSP00000044769 intact:EBI-746742|uniprotkb:Q6PJV2|ensembl:ENSP00000425107 psi-mi:atg5_mouse(display_long)|uniprotkb:Atg5(gene name)|psi-mi:Atg5(display_short)|uniprotkb:Apg5l(gene name synonym)|uniprotkb:APG5-like(gene name synonym) psi-mi:atg12_human(display_long)|uniprotkb:Autophagy-related protein 12(gene name synonym)|uniprotkb:ATG12(gene name)|psi-mi:ATG12(display_short)|uniprotkb:APG12(gene name synonym)|uniprotkb:APG12L(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11580846|imex:IM-25011-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000038160(gene)|ensembl:ENSMUST00000039286(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001974"(blood vessel remodeling)|go:"GO:0002718"(regulation of cytokine production involved in immune response)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019883"(antigen processing and presentation of endogenous antigen)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0009620"(response to fungus)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0035973"(aggrephagy)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042311"(vasodilation)|go:"GO:0042493"|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045060"(negative thymic T cell selection)|go:"GO:0048840"(otolith development)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060047"(heart contraction)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0070257"(positive regulation of mucus secretion)|go:"GO:0071500"(cellular response to nitrosative stress)|go:"GO:0075044"(positive regulation by symbiont of host autophagy)|go:"GO:1902017"(regulation of cilium assembly)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000619"(negative regulation of histone H4-K16 acetylation)|interpro:IPR007239(Autophagy protein 5)|interpro:IPR042526|interpro:IPR042527|mint:Q99J83|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|refseq:XP_011241410.1|refseq:NP_444299.1|refseq:NP_001300942.1|dip:DIP-46420N reactome:R-HSA-1632852|reactome:R-HSA-5205685|reactome:R-HSA-8934903|reactome:R-HSA-936440|refseq:NP_004698.3|ensembl:ENSG00000145782(gene)|ensembl:ENST00000509910(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0030670"(phagocytic vesicle membrane)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0044804"(autophagy of nucleus)|interpro:IPR007242(Autophagy protein 12)|interpro:IPR029071|rcsb pdb:4GDK|rcsb pdb:4GDL|rcsb pdb:4NAW|refseq:NP_001264712.1|dip:DIP-46466N - - - figure legend:Fig. 4a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-hela)|taxid:9606(Homo sapiens epitheloid cervix carcinoma cells) - 2016/02/12 2016/03/03 rogid:XNYb541lnGe1mjdDHei6DNhiNfk10090 rogid:V+K93xoWUNtOTJk4k03IP+Q+HfA9606 rigid:7nHPDwehHqL0ZJwJyoRJnX0wMtw false binding-associated region:?-?|ha tag:c-c binding-associated region:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q99J83 uniprotkb:Q8C0J2-2 intact:EBI-2911848|ensembl:ENSMUSP00000044769 intact:EBI-11580812|ensembl:ENSMUSP00000108811 psi-mi:atg5_mouse(display_long)|uniprotkb:Atg5(gene name)|psi-mi:Atg5(display_short)|uniprotkb:Apg5l(gene name synonym)|uniprotkb:APG5-like(gene name synonym) psi-mi:q8c0j2-2(display_long)|uniprotkb:APG16-like 1(gene name synonym)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym)|uniprotkb:Apg16Lalpha(isoform synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11580846|imex:IM-25011-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000038160(gene)|ensembl:ENSMUST00000039286(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001974"(blood vessel remodeling)|go:"GO:0002718"(regulation of cytokine production involved in immune response)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019883"(antigen processing and presentation of endogenous antigen)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0009620"(response to fungus)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0035973"(aggrephagy)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042311"(vasodilation)|go:"GO:0042493"|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045060"(negative thymic T cell selection)|go:"GO:0048840"(otolith development)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060047"(heart contraction)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0070257"(positive regulation of mucus secretion)|go:"GO:0071500"(cellular response to nitrosative stress)|go:"GO:0075044"(positive regulation by symbiont of host autophagy)|go:"GO:1902017"(regulation of cilium assembly)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000619"(negative regulation of histone H4-K16 acetylation)|interpro:IPR007239(Autophagy protein 5)|interpro:IPR042526|interpro:IPR042527|mint:Q99J83|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|refseq:XP_011241410.1|refseq:NP_444299.1|refseq:NP_001300942.1|dip:DIP-46420N intact:EBI-769195(isoform-parent)|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000113186(transcript) - - isoform-comment:No experimental confirmation available. figure legend:Fig. 4a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-hela)|taxid:9606(Homo sapiens epitheloid cervix carcinoma cells) - 2016/02/12 2016/03/03 rogid:XNYb541lnGe1mjdDHei6DNhiNfk10090 rogid:iMylVRLTFl3kokX04TVsmPqCMlg10090 rigid:7nHPDwehHqL0ZJwJyoRJnX0wMtw false binding-associated region:?-?|ha tag:c-c flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q99J83 uniprotkb:Q99J83 intact:EBI-2911848|ensembl:ENSMUSP00000044769 intact:EBI-2911848|ensembl:ENSMUSP00000044769 psi-mi:atg5_mouse(display_long)|uniprotkb:Atg5(gene name)|psi-mi:Atg5(display_short)|uniprotkb:Apg5l(gene name synonym)|uniprotkb:APG5-like(gene name synonym) psi-mi:atg5_mouse(display_long)|uniprotkb:Atg5(gene name)|psi-mi:Atg5(display_short)|uniprotkb:Apg5l(gene name synonym)|uniprotkb:APG5-like(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11580846|imex:IM-25011-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000038160(gene)|ensembl:ENSMUST00000039286(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001974"(blood vessel remodeling)|go:"GO:0002718"(regulation of cytokine production involved in immune response)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019883"(antigen processing and presentation of endogenous antigen)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0009620"(response to fungus)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0035973"(aggrephagy)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042311"(vasodilation)|go:"GO:0042493"|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045060"(negative thymic T cell selection)|go:"GO:0048840"(otolith development)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060047"(heart contraction)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0070257"(positive regulation of mucus secretion)|go:"GO:0071500"(cellular response to nitrosative stress)|go:"GO:0075044"(positive regulation by symbiont of host autophagy)|go:"GO:1902017"(regulation of cilium assembly)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000619"(negative regulation of histone H4-K16 acetylation)|interpro:IPR007239(Autophagy protein 5)|interpro:IPR042526|interpro:IPR042527|mint:Q99J83|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|refseq:XP_011241410.1|refseq:NP_444299.1|refseq:NP_001300942.1|dip:DIP-46420N ensembl:ENSMUSG00000038160(gene)|ensembl:ENSMUST00000039286(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001974"(blood vessel remodeling)|go:"GO:0002718"(regulation of cytokine production involved in immune response)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019883"(antigen processing and presentation of endogenous antigen)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0009620"(response to fungus)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0035973"(aggrephagy)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042311"(vasodilation)|go:"GO:0042493"|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045060"(negative thymic T cell selection)|go:"GO:0048840"(otolith development)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060047"(heart contraction)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0070257"(positive regulation of mucus secretion)|go:"GO:0071500"(cellular response to nitrosative stress)|go:"GO:0075044"(positive regulation by symbiont of host autophagy)|go:"GO:1902017"(regulation of cilium assembly)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000619"(negative regulation of histone H4-K16 acetylation)|interpro:IPR007239(Autophagy protein 5)|interpro:IPR042526|interpro:IPR042527|mint:Q99J83|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|refseq:XP_011241410.1|refseq:NP_444299.1|refseq:NP_001300942.1|dip:DIP-46420N - - - figure legend:Fig. 4a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-hela)|taxid:9606(Homo sapiens epitheloid cervix carcinoma cells) - 2016/02/12 2016/03/03 rogid:XNYb541lnGe1mjdDHei6DNhiNfk10090 rogid:XNYb541lnGe1mjdDHei6DNhiNfk10090 rigid:7nHPDwehHqL0ZJwJyoRJnX0wMtw false binding-associated region:?-?|ha tag:c-c ha tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q8C0J2-2 uniprotkb:Q8C0J2-2 intact:EBI-11580812|ensembl:ENSMUSP00000108811 intact:EBI-11580812|ensembl:ENSMUSP00000108811 psi-mi:q8c0j2-2(display_long)|uniprotkb:APG16-like 1(gene name synonym)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym)|uniprotkb:Apg16Lalpha(isoform synonym) psi-mi:q8c0j2-2(display_long)|uniprotkb:APG16-like 1(gene name synonym)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym)|uniprotkb:Apg16Lalpha(isoform synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11580901|imex:IM-25011-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-769195(isoform-parent)|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000113186(transcript) intact:EBI-769195(isoform-parent)|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000113186(transcript) - isoform-comment:No experimental confirmation available. isoform-comment:No experimental confirmation available. figure legend:Fig. 4b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-embryonic_stem cell)|taxid:10090(Mus musculus embryonic stem cell) - 2016/02/12 2016/02/15 rogid:iMylVRLTFl3kokX04TVsmPqCMlg10090 rogid:iMylVRLTFl3kokX04TVsmPqCMlg10090 rigid:rzzsx8mI/cHZ13VCHNnIlFK+vgg false flag tag:n-n green fluorescent protein tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q99J83 uniprotkb:Q8C0J2 intact:EBI-2911848|ensembl:ENSMUSP00000044769 intact:EBI-769195|uniprotkb:Q80U97|uniprotkb:Q80U98|uniprotkb:Q80U99|uniprotkb:Q80Y53|uniprotkb:Q9DB63|uniprotkb:Q6KAT7|ensembl:ENSMUSP00000027512 psi-mi:atg5_mouse(display_long)|uniprotkb:Atg5(gene name)|psi-mi:Atg5(display_short)|uniprotkb:Apg5l(gene name synonym)|uniprotkb:APG5-like(gene name synonym) psi-mi:a16l1_mouse(display_long)|uniprotkb:APG16-like 1(gene name synonym)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym) psi-mi:"MI:0018"(two hybrid) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11580932|imex:IM-25011-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000038160(gene)|ensembl:ENSMUST00000039286(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001974"(blood vessel remodeling)|go:"GO:0002718"(regulation of cytokine production involved in immune response)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019883"(antigen processing and presentation of endogenous antigen)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0009620"(response to fungus)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0035973"(aggrephagy)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042311"(vasodilation)|go:"GO:0042493"|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045060"(negative thymic T cell selection)|go:"GO:0048840"(otolith development)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060047"(heart contraction)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0070257"(positive regulation of mucus secretion)|go:"GO:0071500"(cellular response to nitrosative stress)|go:"GO:0075044"(positive regulation by symbiont of host autophagy)|go:"GO:1902017"(regulation of cilium assembly)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000619"(negative regulation of histone H4-K16 acetylation)|interpro:IPR007239(Autophagy protein 5)|interpro:IPR042526|interpro:IPR042527|mint:Q99J83|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|refseq:XP_011241410.1|refseq:NP_444299.1|refseq:NP_001300942.1|dip:DIP-46420N refseq:NP_001192320.1|refseq:NP_084122.2|dip:DIP-31966N|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000027512(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042802"(identical protein binding)|go:"GO:0051020"(GTPase binding)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0098792"(xenophagy)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR001680(WD40 repeat)|interpro:IPR013923(Autophagy protein 16)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|mint:Q8C0J2|rcsb pdb:6SUR|rcsb pdb:6Y09|rcsb pdb:6ZAY|reactome:R-MMU-1632852 - - - figure legend:Fig. 4c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/12 2016/02/18 rogid:XNYb541lnGe1mjdDHei6DNhiNfk10090 rogid:gVwCDGIxRkSzS3z9wAWLdRDAZjo10090 rigid:rouecE5QBsLSz3IJSdMaEEYR7fw false tag:n-n sufficient binding region:1-79|gal4 dna binding domain:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q99J83 uniprotkb:Q8C0J2 intact:EBI-2911848|ensembl:ENSMUSP00000044769 intact:EBI-769195|uniprotkb:Q80U97|uniprotkb:Q80U98|uniprotkb:Q80U99|uniprotkb:Q80Y53|uniprotkb:Q9DB63|uniprotkb:Q6KAT7|ensembl:ENSMUSP00000027512 psi-mi:atg5_mouse(display_long)|uniprotkb:Atg5(gene name)|psi-mi:Atg5(display_short)|uniprotkb:Apg5l(gene name synonym)|uniprotkb:APG5-like(gene name synonym) psi-mi:a16l1_mouse(display_long)|uniprotkb:APG16-like 1(gene name synonym)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym) psi-mi:"MI:0018"(two hybrid) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11580952|imex:IM-25011-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000038160(gene)|ensembl:ENSMUST00000039286(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001974"(blood vessel remodeling)|go:"GO:0002718"(regulation of cytokine production involved in immune response)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019883"(antigen processing and presentation of endogenous antigen)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0009620"(response to fungus)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0035973"(aggrephagy)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042311"(vasodilation)|go:"GO:0042493"|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045060"(negative thymic T cell selection)|go:"GO:0048840"(otolith development)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060047"(heart contraction)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0070257"(positive regulation of mucus secretion)|go:"GO:0071500"(cellular response to nitrosative stress)|go:"GO:0075044"(positive regulation by symbiont of host autophagy)|go:"GO:1902017"(regulation of cilium assembly)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000619"(negative regulation of histone H4-K16 acetylation)|interpro:IPR007239(Autophagy protein 5)|interpro:IPR042526|interpro:IPR042527|mint:Q99J83|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|refseq:XP_011241410.1|refseq:NP_444299.1|refseq:NP_001300942.1|dip:DIP-46420N refseq:NP_001192320.1|refseq:NP_084122.2|dip:DIP-31966N|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000027512(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042802"(identical protein binding)|go:"GO:0051020"(GTPase binding)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0098792"(xenophagy)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR001680(WD40 repeat)|interpro:IPR013923(Autophagy protein 16)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|mint:Q8C0J2|rcsb pdb:6SUR|rcsb pdb:6Y09|rcsb pdb:6ZAY|reactome:R-MMU-1632852 - - - figure legend:Fig. 4c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/12 2016/02/18 rogid:XNYb541lnGe1mjdDHei6DNhiNfk10090 rogid:gVwCDGIxRkSzS3z9wAWLdRDAZjo10090 rigid:rouecE5QBsLSz3IJSdMaEEYR7fw false gal4 dna binding domain:n-n sufficient binding region:1-79|tag:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q8C0J2-2 uniprotkb:Q8C0J2-2 intact:EBI-11580812|ensembl:ENSMUSP00000108811 intact:EBI-11580812|ensembl:ENSMUSP00000108811 psi-mi:q8c0j2-2(display_long)|uniprotkb:APG16-like 1(gene name synonym)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym)|uniprotkb:Apg16Lalpha(isoform synonym) psi-mi:q8c0j2-2(display_long)|uniprotkb:APG16-like 1(gene name synonym)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym)|uniprotkb:Apg16Lalpha(isoform synonym) psi-mi:"MI:0018"(two hybrid) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11580964|imex:IM-25011-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-769195(isoform-parent)|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000113186(transcript) intact:EBI-769195(isoform-parent)|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000113186(transcript) - isoform-comment:No experimental confirmation available. isoform-comment:No experimental confirmation available. figure legend:Fig. 4c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/12 2016/02/15 rogid:iMylVRLTFl3kokX04TVsmPqCMlg10090 rogid:iMylVRLTFl3kokX04TVsmPqCMlg10090 rigid:rzzsx8mI/cHZ13VCHNnIlFK+vgg false necessary binding region:1-276|tag:n-n necessary binding region:1-276|gal4 dna binding domain:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q99J83 uniprotkb:Q8C0J2 intact:EBI-2911848|ensembl:ENSMUSP00000044769 intact:EBI-769195|uniprotkb:Q80U97|uniprotkb:Q80U98|uniprotkb:Q80U99|uniprotkb:Q80Y53|uniprotkb:Q9DB63|uniprotkb:Q6KAT7|ensembl:ENSMUSP00000027512 psi-mi:atg5_mouse(display_long)|uniprotkb:Atg5(gene name)|psi-mi:Atg5(display_short)|uniprotkb:Apg5l(gene name synonym)|uniprotkb:APG5-like(gene name synonym) psi-mi:a16l1_mouse(display_long)|uniprotkb:APG16-like 1(gene name synonym)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11580994|imex:IM-25011-9 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000038160(gene)|ensembl:ENSMUST00000039286(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001974"(blood vessel remodeling)|go:"GO:0002718"(regulation of cytokine production involved in immune response)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019883"(antigen processing and presentation of endogenous antigen)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0009620"(response to fungus)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0035973"(aggrephagy)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042311"(vasodilation)|go:"GO:0042493"|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045060"(negative thymic T cell selection)|go:"GO:0048840"(otolith development)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060047"(heart contraction)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0070257"(positive regulation of mucus secretion)|go:"GO:0071500"(cellular response to nitrosative stress)|go:"GO:0075044"(positive regulation by symbiont of host autophagy)|go:"GO:1902017"(regulation of cilium assembly)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000619"(negative regulation of histone H4-K16 acetylation)|interpro:IPR007239(Autophagy protein 5)|interpro:IPR042526|interpro:IPR042527|mint:Q99J83|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|refseq:XP_011241410.1|refseq:NP_444299.1|refseq:NP_001300942.1|dip:DIP-46420N refseq:NP_001192320.1|refseq:NP_084122.2|dip:DIP-31966N|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000027512(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042802"(identical protein binding)|go:"GO:0051020"(GTPase binding)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0098792"(xenophagy)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR001680(WD40 repeat)|interpro:IPR013923(Autophagy protein 16)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|mint:Q8C0J2|rcsb pdb:6SUR|rcsb pdb:6Y09|rcsb pdb:6ZAY|reactome:R-MMU-1632852 go:"GO:0034045"(phagophore assembly site membrane) - - figure legend:Fig. 6b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-embryonic_stem cell)|taxid:10090(Mus musculus embryonic stem cell) - 2016/02/12 2016/02/18 rogid:XNYb541lnGe1mjdDHei6DNhiNfk10090 rogid:gVwCDGIxRkSzS3z9wAWLdRDAZjo10090 rigid:rouecE5QBsLSz3IJSdMaEEYR7fw false cyan fluorescent protein tag:n-n yellow fluorescent protein tag:n-n - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q99J83 uniprotkb:Q8C0J2 intact:EBI-2911848|ensembl:ENSMUSP00000044769 intact:EBI-769195|uniprotkb:Q80U97|uniprotkb:Q80U98|uniprotkb:Q80U99|uniprotkb:Q80Y53|uniprotkb:Q9DB63|uniprotkb:Q6KAT7|ensembl:ENSMUSP00000027512 psi-mi:atg5_mouse(display_long)|uniprotkb:Atg5(gene name)|psi-mi:Atg5(display_short)|uniprotkb:Apg5l(gene name synonym)|uniprotkb:APG5-like(gene name synonym) psi-mi:a16l1_mouse(display_long)|uniprotkb:APG16-like 1(gene name synonym)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-11581005|imex:IM-25011-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000038160(gene)|ensembl:ENSMUST00000039286(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001974"(blood vessel remodeling)|go:"GO:0002718"(regulation of cytokine production involved in immune response)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019883"(antigen processing and presentation of endogenous antigen)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0009620"(response to fungus)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0035973"(aggrephagy)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042311"(vasodilation)|go:"GO:0042493"|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045060"(negative thymic T cell selection)|go:"GO:0048840"(otolith development)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060047"(heart contraction)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0070257"(positive regulation of mucus secretion)|go:"GO:0071500"(cellular response to nitrosative stress)|go:"GO:0075044"(positive regulation by symbiont of host autophagy)|go:"GO:1902017"(regulation of cilium assembly)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000619"(negative regulation of histone H4-K16 acetylation)|interpro:IPR007239(Autophagy protein 5)|interpro:IPR042526|interpro:IPR042527|mint:Q99J83|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|refseq:XP_011241410.1|refseq:NP_444299.1|refseq:NP_001300942.1|dip:DIP-46420N refseq:NP_001192320.1|refseq:NP_084122.2|dip:DIP-31966N|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000027512(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042802"(identical protein binding)|go:"GO:0051020"(GTPase binding)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0098792"(xenophagy)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR001680(WD40 repeat)|interpro:IPR013923(Autophagy protein 16)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|mint:Q8C0J2|rcsb pdb:6SUR|rcsb pdb:6Y09|rcsb pdb:6ZAY|reactome:R-MMU-1632852 go:"GO:0016020"(membrane) - - figure legend:Fig. 8a, 8b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-embryonic_stem cell)|taxid:10090(Mus musculus embryonic stem cell) - 2016/02/12 2016/02/18 rogid:XNYb541lnGe1mjdDHei6DNhiNfk10090 rogid:gVwCDGIxRkSzS3z9wAWLdRDAZjo10090 rigid:rouecE5QBsLSz3IJSdMaEEYR7fw false green fluorescent protein tag:n-n - - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q99J83 uniprotkb:Q8C0J2-1 intact:EBI-2911848|ensembl:ENSMUSP00000044769 intact:EBI-11599212|ensembl:ENSMUSP00000027512 psi-mi:atg5_mouse(display_long)|uniprotkb:Atg5(gene name)|psi-mi:Atg5(display_short)|uniprotkb:Apg5l(gene name synonym)|uniprotkb:APG5-like(gene name synonym) psi-mi:q8c0j2-1(display_long)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym)|uniprotkb:Apg16Lbeta(isoform synonym)|uniprotkb:APG16-like 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11599191|imex:IM-25011-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000038160(gene)|ensembl:ENSMUST00000039286(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001974"(blood vessel remodeling)|go:"GO:0002718"(regulation of cytokine production involved in immune response)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019883"(antigen processing and presentation of endogenous antigen)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0009620"(response to fungus)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0035973"(aggrephagy)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042311"(vasodilation)|go:"GO:0042493"|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045060"(negative thymic T cell selection)|go:"GO:0048840"(otolith development)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060047"(heart contraction)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0070257"(positive regulation of mucus secretion)|go:"GO:0071500"(cellular response to nitrosative stress)|go:"GO:0075044"(positive regulation by symbiont of host autophagy)|go:"GO:1902017"(regulation of cilium assembly)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000619"(negative regulation of histone H4-K16 acetylation)|interpro:IPR007239(Autophagy protein 5)|interpro:IPR042526|interpro:IPR042527|mint:Q99J83|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|refseq:XP_011241410.1|refseq:NP_444299.1|refseq:NP_001300942.1|dip:DIP-46420N intact:EBI-769195(isoform-parent)|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000027512(transcript) - - - figure legend:Fig. 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-embryonic_stem cell)|taxid:10090(Mus musculus embryonic stem cell) - 2016/02/12 2016/02/19 rogid:XNYb541lnGe1mjdDHei6DNhiNfk10090 rogid:gVwCDGIxRkSzS3z9wAWLdRDAZjo10090 rigid:Fu3T5KZLnx6fAIqsb/aAObMU6lI false green fluorescent protein tag:n-n|35s radiolabel:?-? 35s radiolabel:?-? - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:Q99J83 uniprotkb:Q8C0J2-2 intact:EBI-2911848|ensembl:ENSMUSP00000044769 intact:EBI-11580812|ensembl:ENSMUSP00000108811 psi-mi:atg5_mouse(display_long)|uniprotkb:Atg5(gene name)|psi-mi:Atg5(display_short)|uniprotkb:Apg5l(gene name synonym)|uniprotkb:APG5-like(gene name synonym) psi-mi:q8c0j2-2(display_long)|uniprotkb:APG16-like 1(gene name synonym)|uniprotkb:Atg16l1(gene name)|psi-mi:Atg16l1(display_short)|uniprotkb:Apg16l(gene name synonym)|uniprotkb:Apg16Lalpha(isoform synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11599191|imex:IM-25011-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000038160(gene)|ensembl:ENSMUST00000039286(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001974"(blood vessel remodeling)|go:"GO:0002718"(regulation of cytokine production involved in immune response)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019883"(antigen processing and presentation of endogenous antigen)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0009620"(response to fungus)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0035973"(aggrephagy)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042311"(vasodilation)|go:"GO:0042493"|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045060"(negative thymic T cell selection)|go:"GO:0048840"(otolith development)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060047"(heart contraction)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0070257"(positive regulation of mucus secretion)|go:"GO:0071500"(cellular response to nitrosative stress)|go:"GO:0075044"(positive regulation by symbiont of host autophagy)|go:"GO:1902017"(regulation of cilium assembly)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000619"(negative regulation of histone H4-K16 acetylation)|interpro:IPR007239(Autophagy protein 5)|interpro:IPR042526|interpro:IPR042527|mint:Q99J83|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|refseq:XP_011241410.1|refseq:NP_444299.1|refseq:NP_001300942.1|dip:DIP-46420N intact:EBI-769195(isoform-parent)|ensembl:ENSMUSG00000026289(gene)|ensembl:ENSMUST00000113186(transcript) - - isoform-comment:No experimental confirmation available. figure legend:Fig. 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-embryonic_stem cell)|taxid:10090(Mus musculus embryonic stem cell) - 2016/02/12 2016/02/19 rogid:XNYb541lnGe1mjdDHei6DNhiNfk10090 rogid:iMylVRLTFl3kokX04TVsmPqCMlg10090 rigid:Fu3T5KZLnx6fAIqsb/aAObMU6lI false green fluorescent protein tag:n-n|35s radiolabel:?-? 35s radiolabel:?-? - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:Q99J83 uniprotkb:Q9CQY1 intact:EBI-2911848|ensembl:ENSMUSP00000044769 intact:EBI-2911788|uniprotkb:Q3TKE5|uniprotkb:Q9D7Y5|ensembl:ENSMUSP00000038489 psi-mi:atg5_mouse(display_long)|uniprotkb:Atg5(gene name)|psi-mi:Atg5(display_short)|uniprotkb:Apg5l(gene name synonym)|uniprotkb:APG5-like(gene name synonym) psi-mi:atg12_mouse(display_long)|uniprotkb:Atg12(gene name)|psi-mi:Atg12(display_short)|uniprotkb:Apg12(gene name synonym)|uniprotkb:Apg12l(gene name synonym)|uniprotkb:Autophagy-related protein 12(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Mizushima et al. (2003) pubmed:12665549|imex:IM-25011 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11599191|imex:IM-25011-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000038160(gene)|ensembl:ENSMUST00000039286(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001974"(blood vessel remodeling)|go:"GO:0002718"(regulation of cytokine production involved in immune response)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005930"(axoneme)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0006915"(apoptotic process)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019883"(antigen processing and presentation of endogenous antigen)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0009620"(response to fungus)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0035973"(aggrephagy)|go:"GO:0039689"(negative stranded viral RNA replication)|go:"GO:0042311"(vasodilation)|go:"GO:0042493"|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045060"(negative thymic T cell selection)|go:"GO:0048840"(otolith development)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051279"(regulation of release of sequestered calcium ion into cytosol)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060047"(heart contraction)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0061739"(protein lipidation involved in autophagosome assembly)|go:"GO:0070257"(positive regulation of mucus secretion)|go:"GO:0071500"(cellular response to nitrosative stress)|go:"GO:0075044"(positive regulation by symbiont of host autophagy)|go:"GO:1902017"(regulation of cilium assembly)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000619"(negative regulation of histone H4-K16 acetylation)|interpro:IPR007239(Autophagy protein 5)|interpro:IPR042526|interpro:IPR042527|mint:Q99J83|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|refseq:XP_011241410.1|refseq:NP_444299.1|refseq:NP_001300942.1|dip:DIP-46420N go:"GO:0000045"(autophagosome assembly)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0006501"(C-terminal protein lipidation)|go:"GO:0006914"(autophagy)|go:"GO:0016020"(membrane)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034274"(Atg12-Atg5-Atg16 complex)|go:"GO:0044804"(autophagy of nucleus)|interpro:IPR007242(Autophagy protein 12)|interpro:IPR029071|mint:Q9CQY1|reactome:R-MMU-1632852|reactome:R-MMU-5205685|reactome:R-MMU-8934903|ensembl:ENSMUSG00000032905(gene)|ensembl:ENSMUST00000035648(transcript)|refseq:NP_080493.2|dip:DIP-57729N - - - figure legend:Fig. 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:10090(mouse-embryonic_stem cell)|taxid:10090(Mus musculus embryonic stem cell) - 2016/02/12 2016/02/19 rogid:XNYb541lnGe1mjdDHei6DNhiNfk10090 rogid:VPDzzrLDhtPg3TwA3Qbhr5mB0CQ10090 rigid:Fu3T5KZLnx6fAIqsb/aAObMU6lI false green fluorescent protein tag:n-n|35s radiolabel:?-? 35s radiolabel:?-? - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting)