#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P0AAK1 uniprotkb:P07658 intact:EBI-11420781|uniprotkb:P16428|uniprotkb:Q2MAA5|uniprotkb:Q46883|ensemblbacteria:AAC75766|ensemblbacteria:BAE76801 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 psi-mi:hycb_ecoli(display_long)|uniprotkb:hycB(gene name)|psi-mi:hycB(display_short)|uniprotkb:hevB(gene name synonym)|uniprotkb:b2724(locus name)|uniprotkb:JW2694(locus name)|uniprotkb:Hydrogenase-3 component B(gene name synonym) psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:"MI:0096"(pull down) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425632|imex:IM-24745-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417204.1|refseq:WP_001079186.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75766(transcript)|ensemblbacteria:b2724(gene)|ensemblbacteria:BAE76801(gene)|ensemblbacteria:BAE76801(transcript)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding) go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:pMfYZuHkagXGT8X+yJvV6sQpOu083333 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false his tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P0AAK1 uniprotkb:P16433 intact:EBI-11420781|uniprotkb:P16428|uniprotkb:Q2MAA5|uniprotkb:Q46883|ensemblbacteria:AAC75766|ensemblbacteria:BAE76801 intact:EBI-541977|uniprotkb:Q2MAB0|uniprotkb:Q46881|ensemblbacteria:AAC75761|ensemblbacteria:BAE76796 psi-mi:hycb_ecoli(display_long)|uniprotkb:hycB(gene name)|psi-mi:hycB(display_short)|uniprotkb:hevB(gene name synonym)|uniprotkb:b2724(locus name)|uniprotkb:JW2694(locus name)|uniprotkb:Hydrogenase-3 component B(gene name synonym) psi-mi:hycg_ecoli(display_long)|uniprotkb:Hydrogenase-3 component G(gene name synonym)|uniprotkb:hycG(gene name)|psi-mi:hycG(display_short)|uniprotkb:hevG(gene name synonym)|uniprotkb:b2719(locus name)|uniprotkb:JW2689(locus name) psi-mi:"MI:0096"(pull down) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425632|imex:IM-24745-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417204.1|refseq:WP_001079186.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75766(transcript)|ensemblbacteria:b2724(gene)|ensemblbacteria:BAE76801(gene)|ensemblbacteria:BAE76801(transcript)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding) refseq:NP_417199.1|ensemblbacteria:AAC75761(transcript)|ensemblbacteria:b2719(gene)|ensemblbacteria:BAE76796(gene)|ensemblbacteria:BAE76796(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0046872"(metal ion binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006137(NADH ubiquinone oxidoreductase, 20 kDa subunit)|interpro:IPR006138("NADH dehydrogenase (ubiquinone), 20 kDa subunit")|refseq:WP_000067392.1|dip:DIP-9977N - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:pMfYZuHkagXGT8X+yJvV6sQpOu083333 rogid:C2YmBbDz/nwg+lz/FcCxccU/lUA83333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false his tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P0AAK1 uniprotkb:P16431 intact:EBI-11420781|uniprotkb:P16428|uniprotkb:Q2MAA5|uniprotkb:Q46883|ensemblbacteria:AAC75766|ensemblbacteria:BAE76801 intact:EBI-552702|uniprotkb:Q2MAA8|ensemblbacteria:AAC75763|ensemblbacteria:BAE76798 psi-mi:hycb_ecoli(display_long)|uniprotkb:hycB(gene name)|psi-mi:hycB(display_short)|uniprotkb:hevB(gene name synonym)|uniprotkb:b2724(locus name)|uniprotkb:JW2694(locus name)|uniprotkb:Hydrogenase-3 component B(gene name synonym) psi-mi:hyce_ecoli(display_long)|uniprotkb:Hydrogenase-3 component E(gene name synonym)|uniprotkb:hycE(gene name)|psi-mi:hycE(display_short)|uniprotkb:hevE(gene name synonym)|uniprotkb:b2721(locus name)|uniprotkb:JW2691(locus name) psi-mi:"MI:0096"(pull down) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425632|imex:IM-24745-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417204.1|refseq:WP_001079186.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75766(transcript)|ensemblbacteria:b2724(gene)|ensemblbacteria:BAE76801(gene)|ensemblbacteria:BAE76801(transcript)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding) refseq:NP_417201.1|refseq:WP_001288122.1|dip:DIP-9975N|interpro:IPR037232|ensemblbacteria:AAC75763(transcript)|ensemblbacteria:b2721(gene)|ensemblbacteria:BAE76798(gene)|ensemblbacteria:BAE76798(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0016151"(nickel cation binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051287"(NAD binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR001135(NADH-ubiquinone oxidoreductase, chain 49kDa)|interpro:IPR001268("NADH dehydrogenase (ubiquinone), 30 kDa subunit")|interpro:IPR001501(Nickel-dependent hydrogenase, large subunit)|interpro:IPR014029(NADH-ubiquinone oxidoreductase, chain 49kDa, conserved site)|interpro:IPR029014 - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:pMfYZuHkagXGT8X+yJvV6sQpOu083333 rogid:4sPl0IkMrOsHgBgXMcL2vxInUTc83333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false his tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P0AAK1 uniprotkb:P16432 intact:EBI-11420781|uniprotkb:P16428|uniprotkb:Q2MAA5|uniprotkb:Q46883|ensemblbacteria:AAC75766|ensemblbacteria:BAE76801 intact:EBI-1117285|uniprotkb:Q2MAA9|ensemblbacteria:AAC75762|ensemblbacteria:BAE76797 psi-mi:hycb_ecoli(display_long)|uniprotkb:hycB(gene name)|psi-mi:hycB(display_short)|uniprotkb:hevB(gene name synonym)|uniprotkb:b2724(locus name)|uniprotkb:JW2694(locus name)|uniprotkb:Hydrogenase-3 component B(gene name synonym) psi-mi:hycf_ecoli(display_long)|uniprotkb:hycF(gene name)|psi-mi:hycF(display_short)|uniprotkb:hevF(gene name synonym)|uniprotkb:b2720(locus name)|uniprotkb:JW2690(locus name)|uniprotkb:Hydrogenase-3 component F(gene name synonym) psi-mi:"MI:0096"(pull down) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425632|imex:IM-24745-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417204.1|refseq:WP_001079186.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75766(transcript)|ensemblbacteria:b2724(gene)|ensemblbacteria:BAE76801(gene)|ensemblbacteria:BAE76801(transcript)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding) refseq:WP_000493781.1|refseq:NP_417200.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75762(transcript)|ensemblbacteria:b2720(gene)|ensemblbacteria:BAE76797(gene)|ensemblbacteria:BAE76797(transcript)|go:"GO:0009060"(aerobic respiration)|go:"GO:0016651"("oxidoreductase activity, acting on NAD(P)H")|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR010226(NADH-quinone oxidoreductase, chain I) - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:pMfYZuHkagXGT8X+yJvV6sQpOu083333 rogid:ieXhpWT2bgtfa14KzJ5ujl1jXg083333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false his tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P16431 uniprotkb:P07658 intact:EBI-552702|uniprotkb:Q2MAA8|ensemblbacteria:AAC75763|ensemblbacteria:BAE76798 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 psi-mi:hyce_ecoli(display_long)|uniprotkb:Hydrogenase-3 component E(gene name synonym)|uniprotkb:hycE(gene name)|psi-mi:hycE(display_short)|uniprotkb:hevE(gene name synonym)|uniprotkb:b2721(locus name)|uniprotkb:JW2691(locus name) psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:"MI:0096"(pull down) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425657|imex:IM-24745-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417201.1|refseq:WP_001288122.1|dip:DIP-9975N|interpro:IPR037232|ensemblbacteria:AAC75763(transcript)|ensemblbacteria:b2721(gene)|ensemblbacteria:BAE76798(gene)|ensemblbacteria:BAE76798(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0016151"(nickel cation binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051287"(NAD binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR001135(NADH-ubiquinone oxidoreductase, chain 49kDa)|interpro:IPR001268("NADH dehydrogenase (ubiquinone), 30 kDa subunit")|interpro:IPR001501(Nickel-dependent hydrogenase, large subunit)|interpro:IPR014029(NADH-ubiquinone oxidoreductase, chain 49kDa, conserved site)|interpro:IPR029014 go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:4sPl0IkMrOsHgBgXMcL2vxInUTc83333 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false mutation:83-84|his tag:83-83 - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P16431 uniprotkb:P16433 intact:EBI-552702|uniprotkb:Q2MAA8|ensemblbacteria:AAC75763|ensemblbacteria:BAE76798 intact:EBI-541977|uniprotkb:Q2MAB0|uniprotkb:Q46881|ensemblbacteria:AAC75761|ensemblbacteria:BAE76796 psi-mi:hyce_ecoli(display_long)|uniprotkb:Hydrogenase-3 component E(gene name synonym)|uniprotkb:hycE(gene name)|psi-mi:hycE(display_short)|uniprotkb:hevE(gene name synonym)|uniprotkb:b2721(locus name)|uniprotkb:JW2691(locus name) psi-mi:hycg_ecoli(display_long)|uniprotkb:Hydrogenase-3 component G(gene name synonym)|uniprotkb:hycG(gene name)|psi-mi:hycG(display_short)|uniprotkb:hevG(gene name synonym)|uniprotkb:b2719(locus name)|uniprotkb:JW2689(locus name) psi-mi:"MI:0096"(pull down) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425657|imex:IM-24745-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417201.1|refseq:WP_001288122.1|dip:DIP-9975N|interpro:IPR037232|ensemblbacteria:AAC75763(transcript)|ensemblbacteria:b2721(gene)|ensemblbacteria:BAE76798(gene)|ensemblbacteria:BAE76798(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0016151"(nickel cation binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051287"(NAD binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR001135(NADH-ubiquinone oxidoreductase, chain 49kDa)|interpro:IPR001268("NADH dehydrogenase (ubiquinone), 30 kDa subunit")|interpro:IPR001501(Nickel-dependent hydrogenase, large subunit)|interpro:IPR014029(NADH-ubiquinone oxidoreductase, chain 49kDa, conserved site)|interpro:IPR029014 refseq:NP_417199.1|ensemblbacteria:AAC75761(transcript)|ensemblbacteria:b2719(gene)|ensemblbacteria:BAE76796(gene)|ensemblbacteria:BAE76796(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0046872"(metal ion binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006137(NADH ubiquinone oxidoreductase, 20 kDa subunit)|interpro:IPR006138("NADH dehydrogenase (ubiquinone), 20 kDa subunit")|refseq:WP_000067392.1|dip:DIP-9977N - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:4sPl0IkMrOsHgBgXMcL2vxInUTc83333 rogid:C2YmBbDz/nwg+lz/FcCxccU/lUA83333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false mutation:83-84|his tag:83-83 - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P16431 uniprotkb:P16432 intact:EBI-552702|uniprotkb:Q2MAA8|ensemblbacteria:AAC75763|ensemblbacteria:BAE76798 intact:EBI-1117285|uniprotkb:Q2MAA9|ensemblbacteria:AAC75762|ensemblbacteria:BAE76797 psi-mi:hyce_ecoli(display_long)|uniprotkb:Hydrogenase-3 component E(gene name synonym)|uniprotkb:hycE(gene name)|psi-mi:hycE(display_short)|uniprotkb:hevE(gene name synonym)|uniprotkb:b2721(locus name)|uniprotkb:JW2691(locus name) psi-mi:hycf_ecoli(display_long)|uniprotkb:hycF(gene name)|psi-mi:hycF(display_short)|uniprotkb:hevF(gene name synonym)|uniprotkb:b2720(locus name)|uniprotkb:JW2690(locus name)|uniprotkb:Hydrogenase-3 component F(gene name synonym) psi-mi:"MI:0096"(pull down) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425657|imex:IM-24745-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417201.1|refseq:WP_001288122.1|dip:DIP-9975N|interpro:IPR037232|ensemblbacteria:AAC75763(transcript)|ensemblbacteria:b2721(gene)|ensemblbacteria:BAE76798(gene)|ensemblbacteria:BAE76798(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0016151"(nickel cation binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051287"(NAD binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR001135(NADH-ubiquinone oxidoreductase, chain 49kDa)|interpro:IPR001268("NADH dehydrogenase (ubiquinone), 30 kDa subunit")|interpro:IPR001501(Nickel-dependent hydrogenase, large subunit)|interpro:IPR014029(NADH-ubiquinone oxidoreductase, chain 49kDa, conserved site)|interpro:IPR029014 refseq:WP_000493781.1|refseq:NP_417200.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75762(transcript)|ensemblbacteria:b2720(gene)|ensemblbacteria:BAE76797(gene)|ensemblbacteria:BAE76797(transcript)|go:"GO:0009060"(aerobic respiration)|go:"GO:0016651"("oxidoreductase activity, acting on NAD(P)H")|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR010226(NADH-quinone oxidoreductase, chain I) - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:4sPl0IkMrOsHgBgXMcL2vxInUTc83333 rogid:ieXhpWT2bgtfa14KzJ5ujl1jXg083333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false mutation:83-84|his tag:83-83 - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P16431 uniprotkb:P0AAK1 intact:EBI-552702|uniprotkb:Q2MAA8|ensemblbacteria:AAC75763|ensemblbacteria:BAE76798 intact:EBI-11420781|uniprotkb:P16428|uniprotkb:Q2MAA5|uniprotkb:Q46883|ensemblbacteria:AAC75766|ensemblbacteria:BAE76801 psi-mi:hyce_ecoli(display_long)|uniprotkb:Hydrogenase-3 component E(gene name synonym)|uniprotkb:hycE(gene name)|psi-mi:hycE(display_short)|uniprotkb:hevE(gene name synonym)|uniprotkb:b2721(locus name)|uniprotkb:JW2691(locus name) psi-mi:hycb_ecoli(display_long)|uniprotkb:hycB(gene name)|psi-mi:hycB(display_short)|uniprotkb:hevB(gene name synonym)|uniprotkb:b2724(locus name)|uniprotkb:JW2694(locus name)|uniprotkb:Hydrogenase-3 component B(gene name synonym) psi-mi:"MI:0096"(pull down) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425657|imex:IM-24745-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417201.1|refseq:WP_001288122.1|dip:DIP-9975N|interpro:IPR037232|ensemblbacteria:AAC75763(transcript)|ensemblbacteria:b2721(gene)|ensemblbacteria:BAE76798(gene)|ensemblbacteria:BAE76798(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0016151"(nickel cation binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051287"(NAD binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR001135(NADH-ubiquinone oxidoreductase, chain 49kDa)|interpro:IPR001268("NADH dehydrogenase (ubiquinone), 30 kDa subunit")|interpro:IPR001501(Nickel-dependent hydrogenase, large subunit)|interpro:IPR014029(NADH-ubiquinone oxidoreductase, chain 49kDa, conserved site)|interpro:IPR029014 refseq:NP_417204.1|refseq:WP_001079186.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75766(transcript)|ensemblbacteria:b2724(gene)|ensemblbacteria:BAE76801(gene)|ensemblbacteria:BAE76801(transcript)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding) - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:4sPl0IkMrOsHgBgXMcL2vxInUTc83333 rogid:pMfYZuHkagXGT8X+yJvV6sQpOu083333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false mutation:83-84|his tag:83-83 - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P16432 uniprotkb:P07658 intact:EBI-1117285|uniprotkb:Q2MAA9|ensemblbacteria:AAC75762|ensemblbacteria:BAE76797 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 psi-mi:hycf_ecoli(display_long)|uniprotkb:hycF(gene name)|psi-mi:hycF(display_short)|uniprotkb:hevF(gene name synonym)|uniprotkb:b2720(locus name)|uniprotkb:JW2690(locus name)|uniprotkb:Hydrogenase-3 component F(gene name synonym) psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:"MI:0096"(pull down) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425668|imex:IM-24745-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_000493781.1|refseq:NP_417200.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75762(transcript)|ensemblbacteria:b2720(gene)|ensemblbacteria:BAE76797(gene)|ensemblbacteria:BAE76797(transcript)|go:"GO:0009060"(aerobic respiration)|go:"GO:0016651"("oxidoreductase activity, acting on NAD(P)H")|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR010226(NADH-quinone oxidoreductase, chain I) go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:ieXhpWT2bgtfa14KzJ5ujl1jXg083333 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false his tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P16432 uniprotkb:P16433 intact:EBI-1117285|uniprotkb:Q2MAA9|ensemblbacteria:AAC75762|ensemblbacteria:BAE76797 intact:EBI-541977|uniprotkb:Q2MAB0|uniprotkb:Q46881|ensemblbacteria:AAC75761|ensemblbacteria:BAE76796 psi-mi:hycf_ecoli(display_long)|uniprotkb:hycF(gene name)|psi-mi:hycF(display_short)|uniprotkb:hevF(gene name synonym)|uniprotkb:b2720(locus name)|uniprotkb:JW2690(locus name)|uniprotkb:Hydrogenase-3 component F(gene name synonym) psi-mi:hycg_ecoli(display_long)|uniprotkb:Hydrogenase-3 component G(gene name synonym)|uniprotkb:hycG(gene name)|psi-mi:hycG(display_short)|uniprotkb:hevG(gene name synonym)|uniprotkb:b2719(locus name)|uniprotkb:JW2689(locus name) psi-mi:"MI:0096"(pull down) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425668|imex:IM-24745-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_000493781.1|refseq:NP_417200.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75762(transcript)|ensemblbacteria:b2720(gene)|ensemblbacteria:BAE76797(gene)|ensemblbacteria:BAE76797(transcript)|go:"GO:0009060"(aerobic respiration)|go:"GO:0016651"("oxidoreductase activity, acting on NAD(P)H")|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR010226(NADH-quinone oxidoreductase, chain I) refseq:NP_417199.1|ensemblbacteria:AAC75761(transcript)|ensemblbacteria:b2719(gene)|ensemblbacteria:BAE76796(gene)|ensemblbacteria:BAE76796(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0046872"(metal ion binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006137(NADH ubiquinone oxidoreductase, 20 kDa subunit)|interpro:IPR006138("NADH dehydrogenase (ubiquinone), 20 kDa subunit")|refseq:WP_000067392.1|dip:DIP-9977N - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:ieXhpWT2bgtfa14KzJ5ujl1jXg083333 rogid:C2YmBbDz/nwg+lz/FcCxccU/lUA83333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false his tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P16432 uniprotkb:P16431 intact:EBI-1117285|uniprotkb:Q2MAA9|ensemblbacteria:AAC75762|ensemblbacteria:BAE76797 intact:EBI-552702|uniprotkb:Q2MAA8|ensemblbacteria:AAC75763|ensemblbacteria:BAE76798 psi-mi:hycf_ecoli(display_long)|uniprotkb:hycF(gene name)|psi-mi:hycF(display_short)|uniprotkb:hevF(gene name synonym)|uniprotkb:b2720(locus name)|uniprotkb:JW2690(locus name)|uniprotkb:Hydrogenase-3 component F(gene name synonym) psi-mi:hyce_ecoli(display_long)|uniprotkb:Hydrogenase-3 component E(gene name synonym)|uniprotkb:hycE(gene name)|psi-mi:hycE(display_short)|uniprotkb:hevE(gene name synonym)|uniprotkb:b2721(locus name)|uniprotkb:JW2691(locus name) psi-mi:"MI:0096"(pull down) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425668|imex:IM-24745-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_000493781.1|refseq:NP_417200.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75762(transcript)|ensemblbacteria:b2720(gene)|ensemblbacteria:BAE76797(gene)|ensemblbacteria:BAE76797(transcript)|go:"GO:0009060"(aerobic respiration)|go:"GO:0016651"("oxidoreductase activity, acting on NAD(P)H")|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR010226(NADH-quinone oxidoreductase, chain I) refseq:NP_417201.1|refseq:WP_001288122.1|dip:DIP-9975N|interpro:IPR037232|ensemblbacteria:AAC75763(transcript)|ensemblbacteria:b2721(gene)|ensemblbacteria:BAE76798(gene)|ensemblbacteria:BAE76798(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0016151"(nickel cation binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051287"(NAD binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR001135(NADH-ubiquinone oxidoreductase, chain 49kDa)|interpro:IPR001268("NADH dehydrogenase (ubiquinone), 30 kDa subunit")|interpro:IPR001501(Nickel-dependent hydrogenase, large subunit)|interpro:IPR014029(NADH-ubiquinone oxidoreductase, chain 49kDa, conserved site)|interpro:IPR029014 - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:ieXhpWT2bgtfa14KzJ5ujl1jXg083333 rogid:4sPl0IkMrOsHgBgXMcL2vxInUTc83333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false his tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P16432 uniprotkb:P0AAK1 intact:EBI-1117285|uniprotkb:Q2MAA9|ensemblbacteria:AAC75762|ensemblbacteria:BAE76797 intact:EBI-11420781|uniprotkb:P16428|uniprotkb:Q2MAA5|uniprotkb:Q46883|ensemblbacteria:AAC75766|ensemblbacteria:BAE76801 psi-mi:hycf_ecoli(display_long)|uniprotkb:hycF(gene name)|psi-mi:hycF(display_short)|uniprotkb:hevF(gene name synonym)|uniprotkb:b2720(locus name)|uniprotkb:JW2690(locus name)|uniprotkb:Hydrogenase-3 component F(gene name synonym) psi-mi:hycb_ecoli(display_long)|uniprotkb:hycB(gene name)|psi-mi:hycB(display_short)|uniprotkb:hevB(gene name synonym)|uniprotkb:b2724(locus name)|uniprotkb:JW2694(locus name)|uniprotkb:Hydrogenase-3 component B(gene name synonym) psi-mi:"MI:0096"(pull down) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425668|imex:IM-24745-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_000493781.1|refseq:NP_417200.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75762(transcript)|ensemblbacteria:b2720(gene)|ensemblbacteria:BAE76797(gene)|ensemblbacteria:BAE76797(transcript)|go:"GO:0009060"(aerobic respiration)|go:"GO:0016651"("oxidoreductase activity, acting on NAD(P)H")|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR010226(NADH-quinone oxidoreductase, chain I) refseq:NP_417204.1|refseq:WP_001079186.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75766(transcript)|ensemblbacteria:b2724(gene)|ensemblbacteria:BAE76801(gene)|ensemblbacteria:BAE76801(transcript)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding) - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:ieXhpWT2bgtfa14KzJ5ujl1jXg083333 rogid:pMfYZuHkagXGT8X+yJvV6sQpOu083333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false his tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P07658 uniprotkb:P16433 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 intact:EBI-541977|uniprotkb:Q2MAB0|uniprotkb:Q46881|ensemblbacteria:AAC75761|ensemblbacteria:BAE76796 psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:hycg_ecoli(display_long)|uniprotkb:Hydrogenase-3 component G(gene name synonym)|uniprotkb:hycG(gene name)|psi-mi:hycG(display_short)|uniprotkb:hevG(gene name synonym)|uniprotkb:b2719(locus name)|uniprotkb:JW2689(locus name) psi-mi:"MI:0096"(pull down) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425679|imex:IM-24745-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N refseq:NP_417199.1|ensemblbacteria:AAC75761(transcript)|ensemblbacteria:b2719(gene)|ensemblbacteria:BAE76796(gene)|ensemblbacteria:BAE76796(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0046872"(metal ion binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006137(NADH ubiquinone oxidoreductase, 20 kDa subunit)|interpro:IPR006138("NADH dehydrogenase (ubiquinone), 20 kDa subunit")|refseq:WP_000067392.1|dip:DIP-9977N - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rogid:C2YmBbDz/nwg+lz/FcCxccU/lUA83333 rigid:JSRbyoWiqN229m8m+AZknMkvS1A false - his tag:c-c - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P07658 uniprotkb:P0AAK1 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 intact:EBI-11420781|uniprotkb:P16428|uniprotkb:Q2MAA5|uniprotkb:Q46883|ensemblbacteria:AAC75766|ensemblbacteria:BAE76801 psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:hycb_ecoli(display_long)|uniprotkb:hycB(gene name)|psi-mi:hycB(display_short)|uniprotkb:hevB(gene name synonym)|uniprotkb:b2724(locus name)|uniprotkb:JW2694(locus name)|uniprotkb:Hydrogenase-3 component B(gene name synonym) psi-mi:"MI:0071"(molecular sieving) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425828|imex:IM-24745-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N refseq:NP_417204.1|refseq:WP_001079186.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75766(transcript)|ensemblbacteria:b2724(gene)|ensemblbacteria:BAE76801(gene)|ensemblbacteria:BAE76801(transcript)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding) - - - figure legend:Fig.4C|comment:The strain was lysed in a detergent mixture and subjected to nickel chromatography in the absence of all detergent.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rogid:pMfYZuHkagXGT8X+yJvV6sQpOu083333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false - - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P07658 uniprotkb:P16431 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 intact:EBI-552702|uniprotkb:Q2MAA8|ensemblbacteria:AAC75763|ensemblbacteria:BAE76798 psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:hyce_ecoli(display_long)|uniprotkb:Hydrogenase-3 component E(gene name synonym)|uniprotkb:hycE(gene name)|psi-mi:hycE(display_short)|uniprotkb:hevE(gene name synonym)|uniprotkb:b2721(locus name)|uniprotkb:JW2691(locus name) psi-mi:"MI:0071"(molecular sieving) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425828|imex:IM-24745-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N refseq:NP_417201.1|refseq:WP_001288122.1|dip:DIP-9975N|interpro:IPR037232|ensemblbacteria:AAC75763(transcript)|ensemblbacteria:b2721(gene)|ensemblbacteria:BAE76798(gene)|ensemblbacteria:BAE76798(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0016151"(nickel cation binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051287"(NAD binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR001135(NADH-ubiquinone oxidoreductase, chain 49kDa)|interpro:IPR001268("NADH dehydrogenase (ubiquinone), 30 kDa subunit")|interpro:IPR001501(Nickel-dependent hydrogenase, large subunit)|interpro:IPR014029(NADH-ubiquinone oxidoreductase, chain 49kDa, conserved site)|interpro:IPR029014 - - - figure legend:Fig.4C|comment:The strain was lysed in a detergent mixture and subjected to nickel chromatography in the absence of all detergent.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rogid:4sPl0IkMrOsHgBgXMcL2vxInUTc83333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false - his tag:83-83|mutation:83-84 - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P07658 uniprotkb:P16432 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 intact:EBI-1117285|uniprotkb:Q2MAA9|ensemblbacteria:AAC75762|ensemblbacteria:BAE76797 psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:hycf_ecoli(display_long)|uniprotkb:hycF(gene name)|psi-mi:hycF(display_short)|uniprotkb:hevF(gene name synonym)|uniprotkb:b2720(locus name)|uniprotkb:JW2690(locus name)|uniprotkb:Hydrogenase-3 component F(gene name synonym) psi-mi:"MI:0071"(molecular sieving) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425828|imex:IM-24745-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N refseq:WP_000493781.1|refseq:NP_417200.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75762(transcript)|ensemblbacteria:b2720(gene)|ensemblbacteria:BAE76797(gene)|ensemblbacteria:BAE76797(transcript)|go:"GO:0009060"(aerobic respiration)|go:"GO:0016651"("oxidoreductase activity, acting on NAD(P)H")|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR010226(NADH-quinone oxidoreductase, chain I) - - - figure legend:Fig.4C|comment:The strain was lysed in a detergent mixture and subjected to nickel chromatography in the absence of all detergent.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rogid:ieXhpWT2bgtfa14KzJ5ujl1jXg083333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false - - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P07658 uniprotkb:P16433 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 intact:EBI-541977|uniprotkb:Q2MAB0|uniprotkb:Q46881|ensemblbacteria:AAC75761|ensemblbacteria:BAE76796 psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:hycg_ecoli(display_long)|uniprotkb:Hydrogenase-3 component G(gene name synonym)|uniprotkb:hycG(gene name)|psi-mi:hycG(display_short)|uniprotkb:hevG(gene name synonym)|uniprotkb:b2719(locus name)|uniprotkb:JW2689(locus name) psi-mi:"MI:0071"(molecular sieving) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425828|imex:IM-24745-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N refseq:NP_417199.1|ensemblbacteria:AAC75761(transcript)|ensemblbacteria:b2719(gene)|ensemblbacteria:BAE76796(gene)|ensemblbacteria:BAE76796(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0046872"(metal ion binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006137(NADH ubiquinone oxidoreductase, 20 kDa subunit)|interpro:IPR006138("NADH dehydrogenase (ubiquinone), 20 kDa subunit")|refseq:WP_000067392.1|dip:DIP-9977N - - - figure legend:Fig.4C|comment:The strain was lysed in a detergent mixture and subjected to nickel chromatography in the absence of all detergent.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rogid:C2YmBbDz/nwg+lz/FcCxccU/lUA83333 rigid:deDvQbb9gXEQYVdYrD8+nwsl3RU false - - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P07658 uniprotkb:P0AAK1 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 intact:EBI-11420781|uniprotkb:P16428|uniprotkb:Q2MAA5|uniprotkb:Q46883|ensemblbacteria:AAC75766|ensemblbacteria:BAE76801 psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:hycb_ecoli(display_long)|uniprotkb:hycB(gene name)|psi-mi:hycB(display_short)|uniprotkb:hevB(gene name synonym)|uniprotkb:b2724(locus name)|uniprotkb:JW2694(locus name)|uniprotkb:Hydrogenase-3 component B(gene name synonym) psi-mi:"MI:0071"(molecular sieving) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425871|imex:IM-24745-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N refseq:NP_417204.1|refseq:WP_001079186.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75766(transcript)|ensemblbacteria:b2724(gene)|ensemblbacteria:BAE76801(gene)|ensemblbacteria:BAE76801(transcript)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding) - - - figure legend:Fig.4B|comment:The strain was lysed in a detergent mixture and subjected to nickel chromatography in the presence of 0.05% w/v n-dodecyl-beta-D-maltoside.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rogid:pMfYZuHkagXGT8X+yJvV6sQpOu083333 rigid:i7FF45xciYoo/Bv1U58LctogHMc false - - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P07658 uniprotkb:P16429 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 intact:EBI-556705|uniprotkb:Q2MAA6|uniprotkb:Q46882|ensemblbacteria:AAC75765|ensemblbacteria:BAE76800 psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:hycc_ecoli(display_long)|uniprotkb:Hydrogenase-3 component C(gene name synonym)|uniprotkb:hycC(gene name)|psi-mi:hycC(display_short)|uniprotkb:hevC(gene name synonym)|uniprotkb:b2723(locus name)|uniprotkb:JW2693(locus name) psi-mi:"MI:0071"(molecular sieving) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425871|imex:IM-24745-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N refseq:NP_417203.1|refseq:WP_001274396.1|dip:DIP-9973N|ensemblbacteria:AAC75765(transcript)|ensemblbacteria:b2723(gene)|ensemblbacteria:BAE76800(gene)|ensemblbacteria:BAE76800(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0016021"(integral component of membrane)|go:"GO:0042773"(ATP synthesis coupled electron transport)|interpro:IPR001750("NADH/Ubiquinone/plastoquinone (complex I)")|interpro:IPR003918(NADH-ubiquinone oxidoreductase, chain 4) - - - figure legend:Fig.4B|comment:The strain was lysed in a detergent mixture and subjected to nickel chromatography in the presence of 0.05% w/v n-dodecyl-beta-D-maltoside.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rogid:Zaq3JA1rm3Bv8UQfFO9sQNlPsRs83333 rigid:i7FF45xciYoo/Bv1U58LctogHMc false - - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0039"(edman degradation) uniprotkb:P07658 uniprotkb:P16430 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 intact:EBI-11425617|uniprotkb:Q2MAA7|ensemblbacteria:AAC75764|ensemblbacteria:BAE76799 psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:hycd_ecoli(display_long)|uniprotkb:hycD(gene name)|psi-mi:hycD(display_short)|uniprotkb:hevD(gene name synonym)|uniprotkb:b2722(locus name)|uniprotkb:JW2692(locus name)|uniprotkb:Hydrogenase 3 component D(gene name synonym) psi-mi:"MI:0071"(molecular sieving) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425871|imex:IM-24745-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N refseq:NP_417202.1|refseq:WP_000115224.1|interpro:IPR001694(Respiratory-chain NADH dehydrogenase, subunit 1)|interpro:IPR018086|ensemblbacteria:AAC75764(transcript)|ensemblbacteria:b2722(gene)|ensemblbacteria:BAE76799(gene)|ensemblbacteria:BAE76799(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016491"(oxidoreductase activity) - - - figure legend:Fig.4B|comment:The strain was lysed in a detergent mixture and subjected to nickel chromatography in the presence of 0.05% w/v n-dodecyl-beta-D-maltoside.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rogid:LR1RjD/zFHS+B8p10/ngHBq4Dh483333 rigid:i7FF45xciYoo/Bv1U58LctogHMc false - - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0039"(edman degradation) uniprotkb:P07658 uniprotkb:P16431 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 intact:EBI-552702|uniprotkb:Q2MAA8|ensemblbacteria:AAC75763|ensemblbacteria:BAE76798 psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:hyce_ecoli(display_long)|uniprotkb:Hydrogenase-3 component E(gene name synonym)|uniprotkb:hycE(gene name)|psi-mi:hycE(display_short)|uniprotkb:hevE(gene name synonym)|uniprotkb:b2721(locus name)|uniprotkb:JW2691(locus name) psi-mi:"MI:0071"(molecular sieving) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425871|imex:IM-24745-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N refseq:NP_417201.1|refseq:WP_001288122.1|dip:DIP-9975N|interpro:IPR037232|ensemblbacteria:AAC75763(transcript)|ensemblbacteria:b2721(gene)|ensemblbacteria:BAE76798(gene)|ensemblbacteria:BAE76798(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0016151"(nickel cation binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051287"(NAD binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR001135(NADH-ubiquinone oxidoreductase, chain 49kDa)|interpro:IPR001268("NADH dehydrogenase (ubiquinone), 30 kDa subunit")|interpro:IPR001501(Nickel-dependent hydrogenase, large subunit)|interpro:IPR014029(NADH-ubiquinone oxidoreductase, chain 49kDa, conserved site)|interpro:IPR029014 - - - figure legend:Fig.4B|comment:The strain was lysed in a detergent mixture and subjected to nickel chromatography in the presence of 0.05% w/v n-dodecyl-beta-D-maltoside.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rogid:4sPl0IkMrOsHgBgXMcL2vxInUTc83333 rigid:i7FF45xciYoo/Bv1U58LctogHMc false - his tag:83-83|mutation:83-84 - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P07658 uniprotkb:P16432 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 intact:EBI-1117285|uniprotkb:Q2MAA9|ensemblbacteria:AAC75762|ensemblbacteria:BAE76797 psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:hycf_ecoli(display_long)|uniprotkb:hycF(gene name)|psi-mi:hycF(display_short)|uniprotkb:hevF(gene name synonym)|uniprotkb:b2720(locus name)|uniprotkb:JW2690(locus name)|uniprotkb:Hydrogenase-3 component F(gene name synonym) psi-mi:"MI:0071"(molecular sieving) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425871|imex:IM-24745-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N refseq:WP_000493781.1|refseq:NP_417200.1|interpro:IPR017896|interpro:IPR017900|ensemblbacteria:AAC75762(transcript)|ensemblbacteria:b2720(gene)|ensemblbacteria:BAE76797(gene)|ensemblbacteria:BAE76797(transcript)|go:"GO:0009060"(aerobic respiration)|go:"GO:0016651"("oxidoreductase activity, acting on NAD(P)H")|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR010226(NADH-quinone oxidoreductase, chain I) - - - figure legend:Fig.4B|comment:The strain was lysed in a detergent mixture and subjected to nickel chromatography in the presence of 0.05% w/v n-dodecyl-beta-D-maltoside.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rogid:ieXhpWT2bgtfa14KzJ5ujl1jXg083333 rigid:i7FF45xciYoo/Bv1U58LctogHMc false - - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P07658 uniprotkb:P16433 intact:EBI-1121603|uniprotkb:P78137|uniprotkb:Q2M6M5 intact:EBI-541977|uniprotkb:Q2MAB0|uniprotkb:Q46881|ensemblbacteria:AAC75761|ensemblbacteria:BAE76796 psi-mi:fdhf_ecoli(display_long)|uniprotkb:Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide(gene name synonym)|uniprotkb:Formate dehydrogenase-H subunit alpha(gene name synonym)|uniprotkb:fdhF(gene name)|psi-mi:fdhF(display_short)|uniprotkb:b4079(locus name)|uniprotkb:JW4040(locus name) psi-mi:hycg_ecoli(display_long)|uniprotkb:Hydrogenase-3 component G(gene name synonym)|uniprotkb:hycG(gene name)|psi-mi:hycG(display_short)|uniprotkb:hevG(gene name synonym)|uniprotkb:b2719(locus name)|uniprotkb:JW2689(locus name) psi-mi:"MI:0071"(molecular sieving) McDowall et al. (2014) pubmed:25157147|imex:IM-24745 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-11425871|imex:IM-24745-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0008863"("formate dehydrogenase (NAD+) activity")|go:"GO:0015944"(formate oxidation)|go:"GO:0019628"(urate catabolic process)|go:"GO:0030151"(molybdenum ion binding)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006478(Formate dehydrogenase, alpha subunit)|interpro:IPR006655(Molybdopterin oxidoreductase, prokaryotic, conserved site)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR027467|interpro:IPR041924|interpro:IPR041925|rcsb pdb:1AA6|rcsb pdb:1FDI|rcsb pdb:1FDO|rcsb pdb:2IV2|refseq:WP_001300547.1|refseq:NP_418503.1|dip:DIP-9572N refseq:NP_417199.1|ensemblbacteria:AAC75761(transcript)|ensemblbacteria:b2719(gene)|ensemblbacteria:BAE76796(gene)|ensemblbacteria:BAE76796(transcript)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0046872"(metal ion binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR006137(NADH ubiquinone oxidoreductase, 20 kDa subunit)|interpro:IPR006138("NADH dehydrogenase (ubiquinone), 20 kDa subunit")|refseq:WP_000067392.1|dip:DIP-9977N - - - figure legend:Fig.4B|comment:The strain was lysed in a detergent mixture and subjected to nickel chromatography in the presence of 0.05% w/v n-dodecyl-beta-D-maltoside.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2015/11/26 2015/11/26 rogid:zccIV3Xvzfk8vW6zGUDcNzhqssM83333 rogid:C2YmBbDz/nwg+lz/FcCxccU/lUA83333 rigid:i7FF45xciYoo/Bv1U58LctogHMc false - - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting)