#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:Q94JZ8	uniprotkb:P54609	intact:EBI-10684297|ensemblplants:AT1G14570.1|ensemblplants:AT1G14570.2|uniprotkb:Q9MA26	intact:EBI-1563238|ensemblplants:AT3G09840.1	psi-mi:pux7_arath(display_long)|uniprotkb:PUX7(gene name)|psi-mi:PUX7(display_short)|uniprotkb:T5E21.7(orf name)|uniprotkb:At1g14570(locus name)	psi-mi:cd48a_arath(display_long)|uniprotkb:CDC48A(gene name)|psi-mi:CDC48A(display_short)|uniprotkb:CDC48(gene name synonym)|uniprotkb:F8A24.11(orf name)|uniprotkb:At3g09840(locus name)	psi-mi:"MI:0018"(two hybrid)	Gallois et al. (2013)	imex:IM-23925|pubmed:23747397	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-10684317|imex:IM-23925-1	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_563954.1|refseq:NP_973827.1|interpro:IPR006577(UAS)|interpro:IPR009060(UBA-like)|interpro:IPR003903(Ubiquitin interacting motif)|interpro:IPR029071|interpro:IPR001012(UBX)|interpro:IPR017346(Uncharacterised conserved protein UCP037991, UAS, UBX)|ensemblplants:AT1G14570(gene)|ensemblplants:AT1G14570.1(transcript)|ensemblplants:AT1G14570.2(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0030674"(protein-macromolecule adaptor activity)|interpro:IPR036249	interpro:IPR027417|refseq:NP_187595.1|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR041569|rcsb pdb:6HD3|interpro:IPR029067|ensemblplants:AT3G09840(gene)|ensemblplants:AT3G09840.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009506"(plasmodesma)|go:"GO:0009524"(phragmoplast)|go:"GO:0009846"(pollen germination)|go:"GO:0009860"(pollen tube growth)|go:"GO:0016787"(hydrolase activity)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031648"(protein destabilization)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051301"(cell division)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0097352"(autophagosome maturation)	-	-	-	figure legend:Fig.5A, 5C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2015/02/24	2015/02/25	rogid:hqbIOauuj6/bps9tyJtiRBCMgLk3702	rogid:aDCNRk5I9qDSQtC5sO0SzJoGxSI3702	intact-crc:29C5EDB2B7BC9BEC|rigid:U18rDzlwFxaaZBjv5SsRQjeFZ78	false	sufficient binding region:368-468(IPR001012)	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q94JZ8	uniprotkb:P54609	intact:EBI-10684297|ensemblplants:AT1G14570.1|ensemblplants:AT1G14570.2|uniprotkb:Q9MA26	intact:EBI-1563238|ensemblplants:AT3G09840.1	psi-mi:pux7_arath(display_long)|uniprotkb:PUX7(gene name)|psi-mi:PUX7(display_short)|uniprotkb:T5E21.7(orf name)|uniprotkb:At1g14570(locus name)	psi-mi:cd48a_arath(display_long)|uniprotkb:CDC48A(gene name)|psi-mi:CDC48A(display_short)|uniprotkb:CDC48(gene name synonym)|uniprotkb:F8A24.11(orf name)|uniprotkb:At3g09840(locus name)	psi-mi:"MI:0018"(two hybrid)	Gallois et al. (2013)	imex:IM-23925|pubmed:23747397	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-10684324|imex:IM-23925-2	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_563954.1|refseq:NP_973827.1|interpro:IPR006577(UAS)|interpro:IPR009060(UBA-like)|interpro:IPR003903(Ubiquitin interacting motif)|interpro:IPR029071|interpro:IPR001012(UBX)|interpro:IPR017346(Uncharacterised conserved protein UCP037991, UAS, UBX)|ensemblplants:AT1G14570(gene)|ensemblplants:AT1G14570.1(transcript)|ensemblplants:AT1G14570.2(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0030674"(protein-macromolecule adaptor activity)|interpro:IPR036249	interpro:IPR027417|refseq:NP_187595.1|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR041569|rcsb pdb:6HD3|interpro:IPR029067|ensemblplants:AT3G09840(gene)|ensemblplants:AT3G09840.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009506"(plasmodesma)|go:"GO:0009524"(phragmoplast)|go:"GO:0009846"(pollen germination)|go:"GO:0009860"(pollen tube growth)|go:"GO:0016787"(hydrolase activity)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031648"(protein destabilization)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051301"(cell division)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0097352"(autophagosome maturation)	-	-	-	figure legend:Fig.5C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2015/02/24	2015/02/24	rogid:hqbIOauuj6/bps9tyJtiRBCMgLk3702	rogid:aDCNRk5I9qDSQtC5sO0SzJoGxSI3702	intact-crc:FA7635BDF5E29188|rigid:U18rDzlwFxaaZBjv5SsRQjeFZ78	false	sufficient binding region:368-468(IPR001012)	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q94JZ8	uniprotkb:P54609	intact:EBI-10684297|ensemblplants:AT1G14570.1|ensemblplants:AT1G14570.2|uniprotkb:Q9MA26	intact:EBI-1563238|ensemblplants:AT3G09840.1	psi-mi:pux7_arath(display_long)|uniprotkb:PUX7(gene name)|psi-mi:PUX7(display_short)|uniprotkb:T5E21.7(orf name)|uniprotkb:At1g14570(locus name)	psi-mi:cd48a_arath(display_long)|uniprotkb:CDC48A(gene name)|psi-mi:CDC48A(display_short)|uniprotkb:CDC48(gene name synonym)|uniprotkb:F8A24.11(orf name)|uniprotkb:At3g09840(locus name)	psi-mi:"MI:0809"(bimolecular fluorescence complementation)	Gallois et al. (2013)	imex:IM-23925|pubmed:23747397	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-10684373|imex:IM-23925-3	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_563954.1|refseq:NP_973827.1|interpro:IPR006577(UAS)|interpro:IPR009060(UBA-like)|interpro:IPR003903(Ubiquitin interacting motif)|interpro:IPR029071|interpro:IPR001012(UBX)|interpro:IPR017346(Uncharacterised conserved protein UCP037991, UAS, UBX)|ensemblplants:AT1G14570(gene)|ensemblplants:AT1G14570.1(transcript)|ensemblplants:AT1G14570.2(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0030674"(protein-macromolecule adaptor activity)|interpro:IPR036249	interpro:IPR027417|refseq:NP_187595.1|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR041569|rcsb pdb:6HD3|interpro:IPR029067|ensemblplants:AT3G09840(gene)|ensemblplants:AT3G09840.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009506"(plasmodesma)|go:"GO:0009524"(phragmoplast)|go:"GO:0009846"(pollen germination)|go:"GO:0009860"(pollen tube growth)|go:"GO:0016787"(hydrolase activity)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031648"(protein destabilization)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051301"(cell division)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0097352"(autophagosome maturation)	-	-	-	figure legend:Fig.6|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4097(tobac-leaf)|taxid:4097("Nicotiana tabacum (tobacco) leaf")	-	2015/02/24	2015/02/24	rogid:hqbIOauuj6/bps9tyJtiRBCMgLk3702	rogid:aDCNRk5I9qDSQtC5sO0SzJoGxSI3702	intact-crc:92AD325659D83E5F|rigid:U18rDzlwFxaaZBjv5SsRQjeFZ78	false	nYFP:?-?|necessary binding region:375-468(IPR001012)	cYFP:?-?	-	-	psi-mi:"MI:0867"(tag visualisation by fluorescence)	psi-mi:"MI:0867"(tag visualisation by fluorescence)
uniprotkb:P23706	uniprotkb:Q03378	intact:EBI-633463	intact:EBI-633469	psi-mi:defa_antma(display_long)|uniprotkb:DEFA(gene name)|psi-mi:DEFA(display_short)	psi-mi:glob_antma(display_long)|uniprotkb:GLO(gene name)|psi-mi:GLO(display_short)	psi-mi:"MI:0809"(bimolecular fluorescence complementation)	Gallois et al. (2013)	imex:IM-23925|pubmed:23747397	taxid:4151(antma)|taxid:4151("Antirrhinum majus (Garden snapdragon)")	taxid:4151(antma)|taxid:4151("Antirrhinum majus (Garden snapdragon)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-10684393|imex:IM-23925-4	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR002487(Transcription factor, K-box)|interpro:IPR002100(Transcription factor, MADS-box)|interpro:IPR033896|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046983"(protein dimerization activity)|interpro:IPR036879	interpro:IPR002487(Transcription factor, K-box)|interpro:IPR002100(Transcription factor, MADS-box)|interpro:IPR033896|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046983"(protein dimerization activity)|interpro:IPR036879	-	-	-	figure legend:Fig.6|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4097(tobac-leaf)|taxid:4097("Nicotiana tabacum (tobacco) leaf")	-	2015/02/24	2015/02/24	rogid:U0do/YKGlxBmskJw11X2vDyzJrU4151	rogid:cOXBzosJvEpp3p4SAN1dbLIT2yQ4151	intact-crc:61BEE43FB0ADCEA5|rigid:8YzKmjXrWAfEvlYaWw2mz0aF/rI	false	nYFP:?-?	cYFP:?-?	-	-	psi-mi:"MI:0867"(tag visualisation by fluorescence)	psi-mi:"MI:0867"(tag visualisation by fluorescence)