#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P47170 uniprotkb:P39923 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:"MI:0029"(cosedimentation through density gradient) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9821605|imex:IM-23164-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N - crc64:BB8E73FF5B70CCDF crc64:58CA4983B0BAF7BA figure legend:Supp Fig. 1A, 1B|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 intact-crc:989871F8B7173186|rigid:cI+YozB6C2l38YNBEr73h47PArA false - - 1 1 psi-mi:"MI:0816"(molecular weight estimation by staining) psi-mi:"MI:0816"(molecular weight estimation by staining) uniprotkb:P47170 uniprotkb:P38742 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0029"(cosedimentation through density gradient) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9821605|imex:IM-23164-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - crc64:BB8E73FF5B70CCDF crc64:8580F0C58982D51E figure legend:Supp Fig. 1A, 1B|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:989871F8B7173186|rigid:cI+YozB6C2l38YNBEr73h47PArA false - - 1 1 psi-mi:"MI:0816"(molecular weight estimation by staining) psi-mi:"MI:0816"(molecular weight estimation by staining) uniprotkb:P47170 uniprotkb:Q08281 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:"MI:0029"(cosedimentation through density gradient) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9821605|imex:IM-23164-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) - crc64:BB8E73FF5B70CCDF - figure legend:Supp Fig. 1A, 1B|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 intact-crc:989871F8B7173186|rigid:cI+YozB6C2l38YNBEr73h47PArA false - - 1 1 psi-mi:"MI:0816"(molecular weight estimation by staining) psi-mi:"MI:0816"(molecular weight estimation by staining) uniprotkb:P47170 uniprotkb:P38164 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:"MI:0029"(cosedimentation through density gradient) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9821605|imex:IM-23164-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 - crc64:BB8E73FF5B70CCDF crc64:613630F9F41FF77C figure legend:Supp Fig. 1A, 1B|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 intact-crc:989871F8B7173186|rigid:cI+YozB6C2l38YNBEr73h47PArA false - - 1 3 psi-mi:"MI:0816"(molecular weight estimation by staining) psi-mi:"MI:0816"(molecular weight estimation by staining) uniprotkb:P47170 uniprotkb:Q04491 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0029"(cosedimentation through density gradient) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9821605|imex:IM-23164-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:BB8E73FF5B70CCDF crc64:A94388B4B9CB77FE figure legend:Supp Fig. 1A, 1B|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:989871F8B7173186|rigid:cI+YozB6C2l38YNBEr73h47PArA false - - 1 1 psi-mi:"MI:0816"(molecular weight estimation by staining) psi-mi:"MI:0816"(molecular weight estimation by staining) uniprotkb:P47170 uniprotkb:P53011 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0029"(cosedimentation through density gradient) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9821605|imex:IM-23164-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:BB8E73FF5B70CCDF crc64:EAF75B9DE074106B figure legend:Supp Fig. 1A, 1B|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:989871F8B7173186|rigid:cI+YozB6C2l38YNBEr73h47PArA false - - 1 3 psi-mi:"MI:0816"(molecular weight estimation by staining) psi-mi:"MI:0816"(molecular weight estimation by staining) uniprotkb:P47170 uniprotkb:Q03897 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:"MI:0029"(cosedimentation through density gradient) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9821605|imex:IM-23164-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 - crc64:BB8E73FF5B70CCDF crc64:D6A137FB0FDE2816 figure legend:Supp Fig. 1A, 1B|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 intact-crc:989871F8B7173186|rigid:cI+YozB6C2l38YNBEr73h47PArA false - - 1 1 psi-mi:"MI:0816"(molecular weight estimation by staining) psi-mi:"MI:0816"(molecular weight estimation by staining) uniprotkb:P47170 uniprotkb:P39923 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:"MI:0030"(cross-linking study) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820948|imex:IM-23164-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N - crc64:BB8E73FF5B70CCDF crc64:58CA4983B0BAF7BA figure legend:Fig. 1C Supp table 4|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 intact-crc:DFFCB894BB4A04B0|rigid:cI+YozB6C2l38YNBEr73h47PArA false cross linker:392-392,1-1|cross linker:562-562|cross linker:600-600|cross linker:958-958|cross linker:620-620|cross linker:383-383|cross linker:9-9|cross linker:51-51 cross linker:562-562 - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P38742 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0030"(cross-linking study) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820948|imex:IM-23164-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - crc64:BB8E73FF5B70CCDF crc64:8580F0C58982D51E figure legend:Fig. 1C Supp table 4|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:DFFCB894BB4A04B0|rigid:cI+YozB6C2l38YNBEr73h47PArA false cross linker:392-392,1-1|cross linker:562-562|cross linker:600-600|cross linker:958-958|cross linker:620-620|cross linker:383-383|cross linker:9-9|cross linker:51-51 cross linker:132-132|cross linker:979-979|cross linker:992-992|cross linker:684-684|cross linker:1084-1084|cross linker:132-132|cross linker:132-132|cross linker:979-979 - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:Q08281 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:"MI:0030"(cross-linking study) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820948|imex:IM-23164-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) - crc64:BB8E73FF5B70CCDF - figure legend:Fig. 1C Supp table 4|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 intact-crc:DFFCB894BB4A04B0|rigid:cI+YozB6C2l38YNBEr73h47PArA false cross linker:392-392,1-1|cross linker:562-562|cross linker:600-600|cross linker:958-958|cross linker:620-620|cross linker:383-383|cross linker:9-9|cross linker:51-51 cross linker:118-118|cross linker:118-118|cross linker:676-676|cross linker:1289-1289|cross linker:127-127|cross linker:481-481|cross linker:1273-1273|cross linker:113-113|cross linker:701-701|cross linker:571-571|cross linker:127-127|cross linker:676-676 - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P38164 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:"MI:0030"(cross-linking study) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820948|imex:IM-23164-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 - crc64:BB8E73FF5B70CCDF crc64:613630F9F41FF77C figure legend:Fig. 1C Supp table 4|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 intact-crc:DFFCB894BB4A04B0|rigid:cI+YozB6C2l38YNBEr73h47PArA false cross linker:392-392,1-1|cross linker:562-562|cross linker:600-600|cross linker:958-958|cross linker:620-620|cross linker:383-383|cross linker:9-9|cross linker:51-51 cross linker:922-922|cross linker:922-922|cross linker:505-505|cross linker:441-441|cross linker:498-498|cross linker:434-434|cross linker:921-921|cross linker:885-885|cross linker:501-501|cross linker:922-922|cross linker:922-922|cross linker:434-434|sufficient binding region:936-936 - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:Q04491 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0030"(cross-linking study) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820948|imex:IM-23164-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:BB8E73FF5B70CCDF crc64:A94388B4B9CB77FE figure legend:Fig. 1C Supp table 4|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:DFFCB894BB4A04B0|rigid:cI+YozB6C2l38YNBEr73h47PArA false cross linker:392-392,1-1|cross linker:562-562|cross linker:600-600|cross linker:958-958|cross linker:620-620|cross linker:383-383|cross linker:9-9|cross linker:51-51 cross linker:249-249|sufficient binding region:83-83|cross linker:31-31|cross linker:31-31|cross linker:31-31|cross linker:31-31|cross linker:22-22|cross linker:31-31 - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P53011 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0030"(cross-linking study) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820948|imex:IM-23164-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:BB8E73FF5B70CCDF crc64:EAF75B9DE074106B figure legend:Fig. 1C Supp table 4|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:DFFCB894BB4A04B0|rigid:cI+YozB6C2l38YNBEr73h47PArA false cross linker:392-392,1-1|cross linker:562-562|cross linker:600-600|cross linker:958-958|cross linker:620-620|cross linker:383-383|cross linker:9-9|cross linker:51-51 cross linker:212-212|cross linker:212-212|cross linker:198-198|cross linker:34-34|cross linker:332-332|cross linker:1-1|cross linker:1-1|cross linker:100-100|cross linker:212-212|cross linker:236-236|cross linker:332-332|cross linker:100-100|cross linker:1-1|cross linker:40-40|cross linker:40-40|cross linker:332-332|cross linker:100-100|cross linker:1-1|cross linker:207-207|cross linker:207-207 - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:Q03897 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:"MI:0030"(cross-linking study) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820948|imex:IM-23164-20 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 - crc64:BB8E73FF5B70CCDF crc64:D6A137FB0FDE2816 figure legend:Fig. 1C Supp table 4|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 intact-crc:DFFCB894BB4A04B0|rigid:cI+YozB6C2l38YNBEr73h47PArA false cross linker:392-392,1-1|cross linker:562-562|cross linker:600-600|cross linker:958-958|cross linker:620-620|cross linker:383-383|cross linker:9-9|cross linker:51-51 cross linker:380-380|cross linker:198-198|cross linker:397-397|cross linker:769-769|cross linker:979-979|cross linker:1072-1072|cross linker:189-189|cross linker:443-443|cross linker:443-443|cross linker:656-656|cross linker:979-979|cross linker:979-979|cross linker:642-642|cross linker:788-788|cross linker:443-443|cross linker:189-189|cross linker:646-646|cross linker:656-656 - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P38873 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-24864|uniprotkb:D3DLD4|ensemblfungi:YHR186C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:kog1_yeast(display_long)|uniprotkb:Kontroller of growth protein 1(gene name synonym)|uniprotkb:Local anesthetic-sensitive protein 24(gene name synonym)|uniprotkb:YHR186C(locus name)|uniprotkb:KOG1(gene name)|psi-mi:KOG1(display_short)|uniprotkb:LAS24(gene name synonym)|uniprotkb:H9998.14(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820791|imex:IM-23164-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_012056.1|sgd:S000001229|mint:P38873|dip:DIP-2639N|ensemblfungi:YHR186C(gene)|ensemblfungi:YHR186C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031929"(TOR signaling)|go:"GO:0031931"(TORC1 complex)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0071230"(cellular response to amino acid stimulus)|go:"GO:0071902"(positive regulation of protein serine/threonine kinase activity)|interpro:IPR000357(HEAT)|interpro:IPR001680(WD40 repeat)|interpro:IPR004083(Regulatory associated protein of TOR)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR029347|interpro:IPR036322|reactome:R-SCE-3371571|reactome:R-SCE-9639288 - crc64:BB8E73FF5B70CCDF crc64:B927EE93700176D3 figure legend:Supp table 3 and Supp Fig. 2, track 1|comment:Affinity purification was performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/10 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:8fDDVTuayLjREVAHrrpxJ9ExeCM559292 intact-crc:C88423E5D094551A|rigid:z/lyyCbmDDzuvKE3XtXmc1ONqdk false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:Q03897 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820791|imex:IM-23164-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 - crc64:BB8E73FF5B70CCDF crc64:D6A137FB0FDE2816 figure legend:Supp table 3 and Supp Fig. 2, track 1|comment:Affinity purification was performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/10 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 intact-crc:C88423E5D094551A|rigid:z/lyyCbmDDzuvKE3XtXmc1ONqdk false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P47170 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820791|imex:IM-23164-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) - crc64:BB8E73FF5B70CCDF crc64:BB8E73FF5B70CCDF figure legend:Supp table 3 and Supp Fig. 2, track 1|comment:Affinity purification was performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/10 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 intact-crc:C88423E5D094551A|rigid:z/lyyCbmDDzuvKE3XtXmc1ONqdk false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P39923 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820791|imex:IM-23164-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N - crc64:BB8E73FF5B70CCDF crc64:58CA4983B0BAF7BA figure legend:Supp table 3 and Supp Fig. 2, track 1|comment:Affinity purification was performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/10 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 intact-crc:C88423E5D094551A|rigid:z/lyyCbmDDzuvKE3XtXmc1ONqdk false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P38164 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820791|imex:IM-23164-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 - crc64:BB8E73FF5B70CCDF crc64:613630F9F41FF77C figure legend:Supp table 3 and Supp Fig. 2, track 1|comment:Affinity purification was performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/10 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 intact-crc:C88423E5D094551A|rigid:z/lyyCbmDDzuvKE3XtXmc1ONqdk false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P53011 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820791|imex:IM-23164-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:BB8E73FF5B70CCDF crc64:EAF75B9DE074106B figure legend:Supp table 3 and Supp Fig. 2, track 1|comment:Affinity purification was performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/10 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:C88423E5D094551A|rigid:z/lyyCbmDDzuvKE3XtXmc1ONqdk false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:Q08281 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820791|imex:IM-23164-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) - crc64:BB8E73FF5B70CCDF - figure legend:Supp table 3 and Supp Fig. 2, track 1|comment:Affinity purification was performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/10 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 intact-crc:C88423E5D094551A|rigid:z/lyyCbmDDzuvKE3XtXmc1ONqdk false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:Q04491 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820791|imex:IM-23164-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:BB8E73FF5B70CCDF crc64:A94388B4B9CB77FE figure legend:Supp table 3 and Supp Fig. 2, track 1|comment:Affinity purification was performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/10 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:C88423E5D094551A|rigid:z/lyyCbmDDzuvKE3XtXmc1ONqdk false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P38742 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820791|imex:IM-23164-18 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - crc64:BB8E73FF5B70CCDF crc64:8580F0C58982D51E figure legend:Supp table 3 and Supp Fig. 2, track 1|comment:Affinity purification was performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/10 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:C88423E5D094551A|rigid:z/lyyCbmDDzuvKE3XtXmc1ONqdk false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P38742 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819632|imex:IM-23164-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - crc64:BB8E73FF5B70CCDF crc64:8580F0C58982D51E figure legend:Fig. 1A lane 4, Supp table 3|comment:Interaction observed in SEA4-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:675438A8AC9A5204|rigid:LHc67Yfjnvp9ItlUiierCj0o2HA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P39923 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819632|imex:IM-23164-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N - crc64:BB8E73FF5B70CCDF crc64:58CA4983B0BAF7BA figure legend:Fig. 1A lane 4, Supp table 3|comment:Interaction observed in SEA4-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 intact-crc:675438A8AC9A5204|rigid:LHc67Yfjnvp9ItlUiierCj0o2HA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:Q03897 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819632|imex:IM-23164-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 - crc64:BB8E73FF5B70CCDF crc64:D6A137FB0FDE2816 figure legend:Fig. 1A lane 4, Supp table 3|comment:Interaction observed in SEA4-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 intact-crc:675438A8AC9A5204|rigid:LHc67Yfjnvp9ItlUiierCj0o2HA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:Q04491 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819632|imex:IM-23164-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:BB8E73FF5B70CCDF crc64:A94388B4B9CB77FE figure legend:Fig. 1A lane 4, Supp table 3|comment:Interaction observed in SEA4-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:675438A8AC9A5204|rigid:LHc67Yfjnvp9ItlUiierCj0o2HA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:Q03897 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819594|imex:IM-23164-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 - crc64:BB8E73FF5B70CCDF crc64:D6A137FB0FDE2816 figure legend:Fig. 1 Lanes 1 and 2, Supp table 3|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 intact-crc:436836D253E19679|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P53011 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819594|imex:IM-23164-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:BB8E73FF5B70CCDF crc64:EAF75B9DE074106B figure legend:Fig. 1 Lanes 1 and 2, Supp table 3|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:436836D253E19679|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P38164 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819594|imex:IM-23164-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 - crc64:BB8E73FF5B70CCDF crc64:613630F9F41FF77C figure legend:Fig. 1 Lanes 1 and 2, Supp table 3|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 intact-crc:436836D253E19679|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:Q08281 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819594|imex:IM-23164-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) - crc64:BB8E73FF5B70CCDF - figure legend:Fig. 1 Lanes 1 and 2, Supp table 3|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 intact-crc:436836D253E19679|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P38742 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819594|imex:IM-23164-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - crc64:BB8E73FF5B70CCDF crc64:8580F0C58982D51E figure legend:Fig. 1 Lanes 1 and 2, Supp table 3|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:436836D253E19679|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:Q04491 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819594|imex:IM-23164-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:BB8E73FF5B70CCDF crc64:A94388B4B9CB77FE figure legend:Fig. 1 Lanes 1 and 2, Supp table 3|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:436836D253E19679|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P47170 uniprotkb:P39923 intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819594|imex:IM-23164-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N - crc64:BB8E73FF5B70CCDF crc64:58CA4983B0BAF7BA figure legend:Fig. 1 Lanes 1 and 2, Supp table 3|comment:The complex was further purifed by density gradient centrifugation|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 intact-crc:436836D253E19679|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P0CS90 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-8637|uniprotkb:D6VWL6|uniprotkb:P12398|ensemblfungi:YJR045C psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:hsp77_yeast(display_long)|uniprotkb:ENS1(gene name synonym)|uniprotkb:SSC1(gene name)|psi-mi:SSC1(display_short)|uniprotkb:YJR045C(locus name)|uniprotkb:J1639(orf name)|uniprotkb:mtHSP70(gene name synonym)|uniprotkb:Endonuclease SceI 75 kDa subunit(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N sgd:S000003806|refseq:NP_012579.1|interpro:IPR012725(Chaperone DnaK)|interpro:IPR013126(Heat shock protein 70)|interpro:IPR018181|interpro:IPR029047|interpro:IPR029048|mint:P0CS90|interpro:IPR043129|ensemblfungi:YJR045C(gene)|ensemblfungi:YJR045C_mRNA(transcript)|go:"GO:0001405"(PAM complex, Tim23 associated import motor)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0008566"(mitochondrial protein-transporting ATPase activity)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030150"(protein import into mitochondrial matrix)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0032079"(positive regulation of endodeoxyribonuclease activity)|go:"GO:0034620"(cellular response to unfolded protein)|go:"GO:0042026"(protein refolding)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051085"(chaperone cofactor-dependent protein refolding)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity) - crc64:58CA4983B0BAF7BA caution:This sequence has been withdrawn from Uniprot.|crc64:1E5672E76FCE24AC figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:jwa3ppE0voBqzfZAuY/E52tYrrw559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P38164 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 - crc64:58CA4983B0BAF7BA crc64:613630F9F41FF77C figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P00950 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-13517|uniprotkb:Q02117|uniprotkb:D6VX45|ensemblfungi:YKL152C psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:pmg1_yeast(display_long)|uniprotkb:GPM1(gene name)|psi-mi:GPM1(display_short)|uniprotkb:GPM(gene name synonym)|uniprotkb:YKL152C(locus name)|uniprotkb:YKL607(orf name)|uniprotkb:Phosphoglyceromutase 1(gene name synonym)|uniprotkb:MPGM 1(gene name synonym)|uniprotkb:BPG-dependent PGAM 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_012770.1|sgd:S000001635|go:"GO:0006096"(glycolytic process)|interpro:IPR001345(Phosphoglycerate/bisphosphoglycerate mutase)|interpro:IPR005952(Phosphoglycerate mutase 1)|interpro:IPR013078(Phosphoglycerate mutase)|interpro:IPR029033|rcsb pdb:1BQ3|rcsb pdb:1BQ4|rcsb pdb:1QHF|rcsb pdb:3PGM|rcsb pdb:4PGM|ensemblfungi:YKL152C(gene)|ensemblfungi:YKL152C_mRNA(transcript)|go:"GO:0004619"(phosphoglycerate mutase activity)|rcsb pdb:5PGM|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005829"(cytosol)|go:"GO:0006094"(gluconeogenesis)|mint:P00950|dip:DIP-6260N - crc64:58CA4983B0BAF7BA crc64:45E1A9CCDBDC104D figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:O4lo573Bz6RNmbbe4HdKcMKVaA0559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P07251 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-3234|uniprotkb:Q92449|ensemblfungi:YBL099W|uniprotkb:D6VPQ6 psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:atpa_yeast(display_long)|uniprotkb:ATP1(gene name)|psi-mi:ATP1(display_short)|uniprotkb:YBL0827(orf name)|uniprotkb:YBL099W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N ensemblfungi:YBL099W(gene)|ensemblfungi:YBL099W_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005754"(mitochondrial proton-transporting ATP synthase, catalytic core)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005829"(cytosol)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|interpro:IPR023366|interpro:IPR027417|interpro:IPR033732|interpro:IPR036121|refseq:NP_009453.2|sgd:S000000195|dip:DIP-3025N|mint:P07251|interpro:IPR038376|rcsb pdb:2HLD|rcsb pdb:2WPD|rcsb pdb:2XOK|rcsb pdb:3FKS|rcsb pdb:3OE7|rcsb pdb:3OEE|rcsb pdb:3OEH|rcsb pdb:3OFN|rcsb pdb:3ZIA|rcsb pdb:3ZRY|rcsb pdb:4B2Q|rcsb pdb:6B8H|rcsb pdb:6CP3|rcsb pdb:6CP6|reactome:R-SCE-163210|reactome:R-SCE-8949613 - crc64:58CA4983B0BAF7BA crc64:E8041D289B924696 figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:yqbEHfcYrXujvE9wfeN4KyeOHD8559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P14540 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-2447|uniprotkb:D6VXM7|ensemblfungi:YKL060C psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:alf_yeast(display_long)|uniprotkb:FBA1(gene name)|psi-mi:FBA1(display_short)|uniprotkb:YKL320(orf name)|uniprotkb:Fructose-1,6-bisphosphate aldolase(gene name synonym)|uniprotkb:YKL060C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_012863.1|sgd:S000001543|dip:DIP-4702N|mint:P14540|ensemblfungi:YKL060C(gene)|ensemblfungi:YKL060C_mRNA(transcript)|go:"GO:0004332"(fructose-bisphosphate aldolase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006094"(gluconeogenesis)|go:"GO:0006096"(glycolytic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:1904408"(melatonin binding)|interpro:IPR000771(Ketose-bisphosphate aldolase, class-II)|interpro:IPR006411(Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype)|interpro:IPR013785(Aldolase-type TIM barrel) - crc64:58CA4983B0BAF7BA crc64:C67E61BA5C7E8E4C figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:gEr3mYQBb47yKJji/7xOsQjt3+Y559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:Q04491 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:58CA4983B0BAF7BA crc64:A94388B4B9CB77FE figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P07342 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-9096|ensemblfungi:YMR108W|uniprotkb:D6VZT1 psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:ilvb_yeast(display_long)|uniprotkb:ILV2(gene name)|psi-mi:ILV2(display_short)|uniprotkb:SMR1(gene name synonym)|uniprotkb:YMR108W(locus name)|uniprotkb:YM9718.07(orf name)|uniprotkb:Acetohydroxy-acid synthase catalytic subunit(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N ensemblfungi:YMR108W(gene)|ensemblfungi:YMR108W_mRNA(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0003984"(acetolactate synthase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005948"(acetolactate synthase complex)|go:"GO:0009082"(branched-chain amino acid biosynthetic process)|go:"GO:0009097"(isoleucine biosynthetic process)|go:"GO:0009099"(valine biosynthetic process)|go:"GO:0030976"(thiamine pyrophosphate binding)|go:"GO:0050660"(flavin adenine dinucleotide binding)|interpro:IPR000399(TPP-binding enzymes, conserved site)|interpro:IPR011766(Thiamine pyrophosphate enzyme, C-terminal TPP-binding)|interpro:IPR012000(Thiamine pyrophosphate enzyme, central region)|interpro:IPR012001(Thiamine pyrophosphate enzyme, N-terminal TPP binding region)|interpro:IPR012846(Acetolactate synthase, large subunit, biosynthetic)|interpro:IPR029035|interpro:IPR029061|interpro:IPR039368|rcsb pdb:1JSC|rcsb pdb:1N0H|rcsb pdb:1T9A|rcsb pdb:1T9B|rcsb pdb:1T9C|rcsb pdb:1T9D|rcsb pdb:5FEM|rcsb pdb:5IMS|rcsb pdb:5WKC|rcsb pdb:6BD3|rcsb pdb:6BD9|rcsb pdb:6U9D|refseq:NP_013826.1|sgd:S000004714|mint:P07342|dip:DIP-1104N - crc64:58CA4983B0BAF7BA crc64:B03C4D0F38AA1362 figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:9A0deezeL4n1dExQk1cgdggICGs559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P16140 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-20254|uniprotkb:P32123|uniprotkb:D6VQC4|ensemblfungi:YBR127C psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:vatb_yeast(display_long)|uniprotkb:VMA2(gene name)|psi-mi:VMA2(display_short)|uniprotkb:Vacuolar proton pump subunit B(gene name synonym)|uniprotkb:V-ATPase 57 kDa subunit(gene name synonym)|uniprotkb:VAT2(gene name synonym)|uniprotkb:YBR1002(orf name)|uniprotkb:YBR127C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N sgd:S000000331|refseq:NP_009685.3|ensemblfungi:YBR127C(gene)|ensemblfungi:YBR127C_mRNA(transcript)|go:"GO:0000221"(vacuolar proton-transporting V-type ATPase, V1 domain)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000425"(pexophagy)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006874"(cellular calcium ion homeostasis)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0016787"(hydrolase activity)|go:"GO:0046034"(ATP metabolic process)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|go:"GO:0055085"(transmembrane transport)|go:"GO:1902906"(proteasome storage granule assembly)|go:"GO:1990816"(vacuole-mitochondrion membrane contact site)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005723(ATPase, V1 complex, subunit B)|interpro:IPR020003|interpro:IPR022879|interpro:IPR027417|rcsb pdb:3J9T|rcsb pdb:3J9U|rcsb pdb:3J9V|rcsb pdb:5BW9|rcsb pdb:5D80|rcsb pdb:5VOX|rcsb pdb:5VOY|rcsb pdb:5VOZ|rcsb pdb:6O7V|rcsb pdb:6O7W|rcsb pdb:6O7X|reactome:R-SCE-1222556|reactome:R-SCE-77387|reactome:R-SCE-917977|reactome:R-SCE-9639288|dip:DIP-2292N|mint:P16140 - crc64:58CA4983B0BAF7BA crc64:02A7DEC571EFF7C2 figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:plrXuzL+4el/8brAJsClEbg+p0E559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P47170 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) - crc64:58CA4983B0BAF7BA crc64:BB8E73FF5B70CCDF figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P19882 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-8586|uniprotkb:D6VYQ6|ensemblfungi:YLR259C psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:hsp60_yeast(display_long)|uniprotkb:HSP60(gene name)|psi-mi:HSP60(display_short)|uniprotkb:MIF4(gene name synonym)|uniprotkb:YLR259C(locus name)|uniprotkb:L8479.10(orf name)|uniprotkb:Stimulator factor I 66 kDa component(gene name synonym)|uniprotkb:P66(gene name synonym)|uniprotkb:CPN60(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_013360.1|sgd:S000004249|mint:P19882|dip:DIP-7648N|ensemblfungi:YLR259C(gene)|ensemblfungi:YLR259C_mRNA(transcript)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005829"(cytosol)|go:"GO:0006457"(protein folding)|go:"GO:0006458"('de novo' protein folding)|go:"GO:0008637"(apoptotic mitochondrial changes)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0034514"(mitochondrial unfolded protein response)|go:"GO:0042026"(protein refolding)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0045041"(protein import into mitochondrial intermembrane space)|go:"GO:0050821"(protein stabilization)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051087"(chaperone binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051604"(protein maturation)|interpro:IPR001844(Chaperonin Cpn60)|interpro:IPR002423(Chaperonin Cpn60/TCP-1)|interpro:IPR018370|interpro:IPR027409|interpro:IPR027410|interpro:IPR027413|reactome:R-SCE-1268020 - crc64:58CA4983B0BAF7BA crc64:279DC3AF5A2B0A3E figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:DoMJw4ScT3htVDJn+ZJD5fIlSOA559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P00830 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-3242|uniprotkb:D6VWU0|ensemblfungi:YJR121W psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:atpb_yeast(display_long)|uniprotkb:ATP2(gene name)|psi-mi:ATP2(display_short)|uniprotkb:J2041(orf name)|uniprotkb:YJR121W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N sgd:S000003882|refseq:NP_012655.3|dip:DIP-3028N|mint:P00830|ensemblfungi:YJR121W(gene)|ensemblfungi:YJR121W_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005753"(mitochondrial proton-transporting ATP synthase complex)|go:"GO:0005754"(mitochondrial proton-transporting ATP synthase, catalytic core)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005829"(cytosol)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0042776"(mitochondrial ATP synthesis coupled proton transport)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005722(ATPase, F1 complex, beta subunit)|interpro:IPR020003|interpro:IPR024034|interpro:IPR027417|interpro:IPR036121|rcsb pdb:2HLD|rcsb pdb:2WPD|rcsb pdb:2XOK|rcsb pdb:3FKS|rcsb pdb:3OE7|rcsb pdb:3OEE|rcsb pdb:3OEH|rcsb pdb:3OFN|rcsb pdb:3ZIA|rcsb pdb:3ZRY|rcsb pdb:4B2Q|rcsb pdb:6B8H|rcsb pdb:6CP3|rcsb pdb:6CP6|reactome:R-SCE-163210|reactome:R-SCE-8949613 - crc64:58CA4983B0BAF7BA crc64:EDFF256826F68F0C figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:XA14lgBJ4D0nrBpMQw5tsc4aByU559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P25694 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-4308|ensemblfungi:YDL126C|uniprotkb:D6VRM4 psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:cdc48_yeast(display_long)|uniprotkb:CDC48(gene name)|psi-mi:CDC48(display_short)|uniprotkb:Cell division cycle protein 48(gene name synonym)|uniprotkb:Transitional endoplasmic reticulum ATPase homolog(gene name synonym)|uniprotkb:YDL126C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_010157.1|sgd:S000002284|ensemblfungi:YDL126C(gene)|ensemblfungi:YDL126C_mRNA(transcript)|go:"GO:0000837"(Doa10p ubiquitin ligase complex)|dip:DIP-2704N|mint:P25694|go:"GO:0000839"(Hrd1p ubiquitin ligase ERAD-L complex)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006274"(DNA replication termination)|go:"GO:0010636"(positive regulation of mitochondrial fusion)|go:"GO:0016236"(macroautophagy)|go:"GO:0016320"(endoplasmic reticulum membrane fusion)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0019888"(protein phosphatase regulator activity)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030894"(replisome)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031134"(sister chromatid biorientation)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0034517"(ribophagy)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0036266"(Cdc48p-Npl4p-Vms1p AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0043328"(protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway)|go:"GO:0043332"(mating projection tip)|go:"GO:0043624"|go:"GO:0046034"(ATP metabolic process)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051974"(negative regulation of telomerase activity)|go:"GO:0070651"(nonfunctional rRNA decay)|go:"GO:0071629"(cytoplasm protein quality control by the ubiquitin-proteasome system)|go:"GO:0071630"(nuclear protein quality control by the ubiquitin-proteasome system)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0072671"(mitochondria-associated ubiquitin-dependent protein catabolic process)|go:"GO:0097352"(autophagosome maturation)|go:"GO:0120174"(stress-induced homeostatically regulated protein degradation pathway)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1900182"(positive regulation of protein localization to nucleus)|go:"GO:1990112"(RQC complex)|go:"GO:1990116"(ribosome-associated ubiquitin-dependent protein catabolic process)|go:"GO:1990171"(SCF complex disassembly in response to cadmium stress)|go:"GO:2001168"(positive regulation of histone H2B ubiquitination)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR015415(Vps4 oligomerisation, C-terminal)|interpro:IPR027417|interpro:IPR029067|interpro:IPR041569|rcsb pdb:6OA9|rcsb pdb:6OAA|rcsb pdb:6OAB|rcsb pdb:6OMB|rcsb pdb:6OPC|reactome:R-SCE-110320|reactome:R-SCE-3371511|reactome:R-SCE-532668|reactome:R-SCE-5358346|reactome:R-SCE-5689896|reactome:R-SCE-6798695|reactome:R-SCE-8876725 - crc64:58CA4983B0BAF7BA crc64:02ADDB9A227614D8 figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:qM/04kWcyjkQ3QCa3WklyvhNigE559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:Q03897 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 - crc64:58CA4983B0BAF7BA crc64:D6A137FB0FDE2816 figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P29311 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-3661|uniprotkb:Q06854|uniprotkb:D3DM86|ensemblfungi:YER177W psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:bmh1_yeast(display_long)|uniprotkb:YER177W(locus name)|uniprotkb:BMH1(gene name)|psi-mi:BMH1(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N sgd:S000000979|refseq:NP_011104.3|dip:DIP-4313N|mint:P29311|ensemblfungi:YER177W(gene)|ensemblfungi:YER177W_mRNA(transcript)|go:"GO:0000077"(DNA damage checkpoint signaling)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001402"(signal transduction involved in filamentous growth)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0007265"(Ras protein signal transduction)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0030437"(ascospore formation)|go:"GO:0031578"(mitotic spindle orientation checkpoint signaling)|go:"GO:0034221"(fungal-type cell wall chitin biosynthetic process)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0050815"(phosphoserine residue binding)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070842"(aggresome assembly)|go:"GO:0070873"(regulation of glycogen metabolic process)|go:"GO:1904667"(negative regulation of ubiquitin protein ligase activity)|interpro:IPR000308(14-3-3 protein)|interpro:IPR023409|interpro:IPR023410|interpro:IPR036815|rcsb pdb:5N6N|rcsb pdb:6QK8 - crc64:58CA4983B0BAF7BA crc64:0A234167E313688B figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:RnX8tqsjlxM+7Mi+Thlhc1XrTy4559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P23641 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-11178|uniprotkb:D6VWP7|ensemblfungi:YJR077C psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:mpcp_yeast(display_long)|uniprotkb:Phosphate transport protein(gene name synonym)|uniprotkb:J1837(orf name)|uniprotkb:YJR077C(locus name)|uniprotkb:MIR1(gene name)|psi-mi:MIR1(display_short)|uniprotkb:mPic 1(gene name synonym)|uniprotkb:Mitochondrial import receptor(gene name synonym)|uniprotkb:p32(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N ensemblfungi:YJR077C(gene)|ensemblfungi:YJR077C_mRNA(transcript)|go:"GO:0005315"(inorganic phosphate transmembrane transporter activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0031305"(integral component of mitochondrial inner membrane)|go:"GO:0035435"(phosphate ion transmembrane transport)|go:"GO:1990547"(mitochondrial phosphate ion transmembrane transport)|interpro:IPR002067(Mitochondrial carrier protein)|interpro:IPR018108|interpro:IPR023395|interpro:IPR044677|refseq:NP_012611.1|sgd:S000003838|dip:DIP-1714N - crc64:58CA4983B0BAF7BA crc64:89D1D97C49A9E8F1 figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:kHmfGupxVg2OGqtJ1oIwqPCeY3Q559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P15646 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - crc64:58CA4983B0BAF7BA crc64:56A8B958A7B6066E figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P53011 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:58CA4983B0BAF7BA crc64:EAF75B9DE074106B figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P38697 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-9186|ensemblfungi:YHR216W|uniprotkb:D3DLH1 psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:imdh2_yeast(display_long)|uniprotkb:IMD2(gene name)|psi-mi:IMD2(display_short)|uniprotkb:PUR5(gene name synonym)|uniprotkb:YHR216W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N interpro:IPR001093(IMP dehydrogenase/GMP reductase)|interpro:IPR005990(IMP dehydrogenase)|interpro:IPR013785(Aldolase-type TIM barrel)|interpro:IPR015875(IMP dehydrogenase / GMP reductase, conserved site)|reactome:R-SCE-6798695|reactome:R-SCE-73817|ensemblfungi:YHR216W(gene)|ensemblfungi:YHR216W_mRNA(transcript)|go:"GO:0000166"(nucleotide binding)|go:"GO:0000785"(chromatin)|go:"GO:0003682"(chromatin binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003938"(IMP dehydrogenase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006177"(GMP biosynthetic process)|go:"GO:0006183"(GTP biosynthetic process)|go:"GO:0046872"(metal ion binding)|interpro:IPR000644(Cystathionine beta-synthase, core)|refseq:NP_012088.3|sgd:S000001259|dip:DIP-2840N|mint:P38697 - crc64:58CA4983B0BAF7BA crc64:7CA3EC11238906B9 figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:gvhJG08mLXZGrtvNUTdeRhzMhcI559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P04840 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-13686|uniprotkb:D6W1C3|ensemblfungi:YNL055C psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:vdac1_yeast(display_long)|uniprotkb:POR1(gene name)|psi-mi:POR1(display_short)|uniprotkb:OMP2(gene name synonym)|uniprotkb:VDAC1(gene name synonym)|uniprotkb:YNL055C(locus name)|uniprotkb:N2441(orf name)|uniprotkb:YNL2441C(orf name)|uniprotkb:Voltage-dependent anion-selective channel protein 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_014343.1|sgd:S000005000|ensemblfungi:YNL055C(gene)|ensemblfungi:YNL055C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0006811"(ion transport)|go:"GO:0006915"(apoptotic process)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0008308"(voltage-gated anion channel activity)|go:"GO:0015288"(porin activity)|go:"GO:0031307"(integral component of mitochondrial outer membrane)|go:"GO:0042307"(positive regulation of protein import into nucleus)|go:"GO:0045454"(cell redox homeostasis)|go:"GO:0046930"(pore complex)|go:"GO:0048039"(ubiquinone binding)|go:"GO:0051027"(DNA transport)|go:"GO:0071902"(positive regulation of protein serine/threonine kinase activity)|interpro:IPR001925(Porin, eukaryotic type)|interpro:IPR023614|interpro:IPR027246|reactome:R-SCE-70268|mint:P04840|dip:DIP-6453N - crc64:58CA4983B0BAF7BA crc64:C99D03711AF9B54D figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:RzZ3bLhZ2srdAGXflOSTaAI3fpU559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P05030 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-13501|uniprotkb:D6VUC9|ensemblfungi:YGL008C psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:pma1_yeast(display_long)|uniprotkb:PMA1(gene name)|psi-mi:PMA1(display_short)|uniprotkb:Proton pump 1(gene name synonym)|uniprotkb:YGL008C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_011507.1|sgd:S000002976|interpro:IPR023214|interpro:IPR023298|interpro:IPR023299|interpro:IPR036412|interpro:IPR044492|ensemblfungi:YGL008C(gene)|ensemblfungi:YGL008C_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0008553"(P-type proton-exporting transporter activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0045121"(membrane raft)|go:"GO:0046872"(metal ion binding)|go:"GO:0051453"(regulation of intracellular pH)|go:"GO:0055085"(transmembrane transport)|go:"GO:0120029"(proton export across plasma membrane)|go:"GO:1902600"(proton transmembrane transport)|go:"GO:1902906"(proteasome storage granule assembly)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001757(ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter)|interpro:IPR004014(ATPase, P-type cation-transporter, N-terminal)|interpro:IPR006534(Plasma-membrane proton-efflux P-type ATPase)|interpro:IPR008250(E1-E2 ATPase-associated region)|interpro:IPR018303|mint:P05030|dip:DIP-2537N - crc64:58CA4983B0BAF7BA crc64:AA1E93966B37E8E1 figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:TMBBGdTUobxIviFblM9X/errjvw559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P27476 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-12274|ensemblfungi:YGR159C|uniprotkb:D6VUT9 psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:nsr1_yeast(display_long)|uniprotkb:NSR1(gene name)|psi-mi:NSR1(display_short)|uniprotkb:YGR159C(locus name)|uniprotkb:G7001(orf name)|uniprotkb:p67(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N ensemblfungi:YGR159C(gene)|ensemblfungi:YGR159C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034276|interpro:IPR035979|interpro:IPR034272|refseq:NP_011675.1|sgd:S000003391|mint:P27476|dip:DIP-5537N - crc64:58CA4983B0BAF7BA crc64:90DEEE7BBC20BC0C figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:q0/AgJC55iTpn/5kCsxal2kQ7Ls559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P38742 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - crc64:58CA4983B0BAF7BA crc64:8580F0C58982D51E figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P15703 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-3605|uniprotkb:D6VV59|ensemblfungi:YGR282C psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:bgl2_yeast(display_long)|uniprotkb:Exo-1,3-beta-glucanase(gene name synonym)|uniprotkb:GP29(gene name synonym)|uniprotkb:Soluble cell wall protein 9(gene name synonym)|uniprotkb:YGR282C(locus name)|uniprotkb:BGL2(gene name)|psi-mi:BGL2(display_short)|uniprotkb:SCW9(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819823|imex:IM-23164-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_011798.1|sgd:S000003514|dip:DIP-6341N|ensemblfungi:YGR282C(gene)|ensemblfungi:YGR282C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0004338"(glucan exo-1,3-beta-glucosidase activity)|go:"GO:0005576"(extracellular region)|go:"GO:0005975"(carbohydrate metabolic process)|go:"GO:0008061"(chitin binding)|go:"GO:0009277"(fungal-type cell wall)|go:"GO:0009986"(cell surface)|go:"GO:0031505"(fungal-type cell wall organization)|go:"GO:0042124"(1,3-beta-glucanosyltransferase activity)|go:"GO:0042973"(glucan endo-1,3-beta-D-glucosidase activity)|go:"GO:0071555"(cell wall organization)|interpro:IPR000490(Glycoside hydrolase, family 17)|interpro:IPR017853(Glycoside hydrolase, catalytic core) - crc64:58CA4983B0BAF7BA crc64:118D75528C5AD383 figure legend:Fig. 1A Track 6, Supp. Table 3, Supp Fig. 2 Track 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:PutcI0ZKbzt1777Q5DT/RX+G1F4559292 intact-crc:B9356A9E3A1EB72B|rigid:AMasGMYQymOfd5m0uF3oi6zAgVs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P38164 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819879|imex:IM-23164-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 - crc64:58CA4983B0BAF7BA crc64:613630F9F41FF77C figure legend:Figure 1 A, Track 7, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 intact-crc:5595C61C92F37763|rigid:KwKC+sBQ5lCKuuqyw+OjZquLO7Q false protein a tag:?-?|sufficient binding region:1-496 - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:Q03897 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819879|imex:IM-23164-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 - crc64:58CA4983B0BAF7BA crc64:D6A137FB0FDE2816 figure legend:Figure 1 A, Track 7, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 intact-crc:5595C61C92F37763|rigid:KwKC+sBQ5lCKuuqyw+OjZquLO7Q false protein a tag:?-?|sufficient binding region:1-496 - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P47170 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819879|imex:IM-23164-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) - crc64:58CA4983B0BAF7BA crc64:BB8E73FF5B70CCDF figure legend:Figure 1 A, Track 7, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 intact-crc:5595C61C92F37763|rigid:KwKC+sBQ5lCKuuqyw+OjZquLO7Q false protein a tag:?-?|sufficient binding region:1-496 - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P38742 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819879|imex:IM-23164-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - crc64:58CA4983B0BAF7BA crc64:8580F0C58982D51E figure legend:Figure 1 A, Track 7, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:5595C61C92F37763|rigid:KwKC+sBQ5lCKuuqyw+OjZquLO7Q false protein a tag:?-?|sufficient binding region:1-496 - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:Q04491 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819879|imex:IM-23164-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:58CA4983B0BAF7BA crc64:A94388B4B9CB77FE figure legend:Figure 1 A, Track 7, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:5595C61C92F37763|rigid:KwKC+sBQ5lCKuuqyw+OjZquLO7Q false protein a tag:?-?|sufficient binding region:1-496 - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P39923 uniprotkb:P53011 intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819879|imex:IM-23164-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:58CA4983B0BAF7BA crc64:EAF75B9DE074106B figure legend:Figure 1 A, Track 7, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:5595C61C92F37763|rigid:KwKC+sBQ5lCKuuqyw+OjZquLO7Q false protein a tag:?-?|sufficient binding region:1-496 - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:Q12499 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-12126|uniprotkb:D6W309|ensemblfungi:YOR310C psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:nop58_yeast(display_long)|uniprotkb:Nucleolar protein 5(gene name synonym)|uniprotkb:NOP58(gene name)|psi-mi:NOP58(display_short)|uniprotkb:NOP5(gene name synonym)|uniprotkb:YOR310C(locus name)|uniprotkb:O6108(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) ensemblfungi:YOR310C(gene)|ensemblfungi:YOR310C_mRNA(transcript)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0017069"(snRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:1902570"(protein localization to nucleolus)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-4570464|reactome:R-SCE-6791226|rcsb pdb:6ZQC|refseq:NP_014955.1|sgd:S000005837|dip:DIP-5843N|mint:Q12499 - crc64:8580F0C58982D51E crc64:8A2889448B2A19E2 figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:Dtk1A6GOVO3KgTak8cTHjO+eDQ4559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:P18239 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-2293|uniprotkb:D6VPW9|ensemblfungi:YBL030C psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:adt2_yeast(display_long)|uniprotkb:PET9(gene name)|psi-mi:PET9(display_short)|uniprotkb:AAC2(gene name synonym)|uniprotkb:YBL030C(locus name)|uniprotkb:YBL0421(orf name)|uniprotkb:Adenine nucleotide translocator 2(gene name synonym)|uniprotkb:Petite colonies protein 9(gene name synonym)|uniprotkb:ADP/ATP translocase 2(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) refseq:NP_009523.1|sgd:S000000126|dip:DIP-2917N|mint:P18239|ensemblfungi:YBL030C(gene)|ensemblfungi:YBL030C_mRNA(transcript)|go:"GO:0005471"("ATP:ADP antiporter activity")|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0006839"(mitochondrial transport)|go:"GO:0006915"(apoptotic process)|go:"GO:0009060"(aerobic respiration)|go:"GO:0009061"(anaerobic respiration)|go:"GO:0015866"(ADP transport)|go:"GO:0015867"(ATP transport)|go:"GO:0015886"(heme transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0055085"(transmembrane transport)|go:"GO:0140021"(mitochondrial ADP transmembrane transport)|go:"GO:1990544"(mitochondrial ATP transmembrane transport)|interpro:IPR002067(Mitochondrial carrier protein)|interpro:IPR002113(Adenine nucleotide translocator 1)|interpro:IPR018108|interpro:IPR023395|rcsb pdb:4C9G|rcsb pdb:4C9H|reactome:R-SCE-1268020|reactome:R-SCE-83936 - crc64:8580F0C58982D51E crc64:A9805DC33D9E24AC figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:kw16b0i/0LOlWLEs0Jcd68KNzJ4559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:P23641 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-11178|uniprotkb:D6VWP7|ensemblfungi:YJR077C psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:mpcp_yeast(display_long)|uniprotkb:Phosphate transport protein(gene name synonym)|uniprotkb:J1837(orf name)|uniprotkb:YJR077C(locus name)|uniprotkb:MIR1(gene name)|psi-mi:MIR1(display_short)|uniprotkb:mPic 1(gene name synonym)|uniprotkb:Mitochondrial import receptor(gene name synonym)|uniprotkb:p32(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) ensemblfungi:YJR077C(gene)|ensemblfungi:YJR077C_mRNA(transcript)|go:"GO:0005315"(inorganic phosphate transmembrane transporter activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0031305"(integral component of mitochondrial inner membrane)|go:"GO:0035435"(phosphate ion transmembrane transport)|go:"GO:1990547"(mitochondrial phosphate ion transmembrane transport)|interpro:IPR002067(Mitochondrial carrier protein)|interpro:IPR018108|interpro:IPR023395|interpro:IPR044677|refseq:NP_012611.1|sgd:S000003838|dip:DIP-1714N - crc64:8580F0C58982D51E crc64:89D1D97C49A9E8F1 figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:kHmfGupxVg2OGqtJ1oIwqPCeY3Q559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:P00359 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-7218|uniprotkb:Q6Q5P9|uniprotkb:D6VUX4|ensemblfungi:YGR192C psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:g3p3_yeast(display_long)|uniprotkb:TDH3(gene name)|psi-mi:TDH3(display_short)|uniprotkb:GPD3(gene name synonym)|uniprotkb:YGR192C(locus name)|uniprotkb:G7576(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) sgd:S000003424|refseq:NP_011708.3|mint:P00359|dip:DIP-4309N|ensemblfungi:YGR192C(gene)|ensemblfungi:YGR192C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004365"("glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity")|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005811"(lipid droplet)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006094"(gluconeogenesis)|go:"GO:0006096"(glycolytic process)|go:"GO:0006915"(apoptotic process)|go:"GO:0009277"(fungal-type cell wall)|go:"GO:0015886"(heme transport)|go:"GO:0050661"(NADP binding)|go:"GO:0051287"(NAD binding)|go:"GO:0072593"(reactive oxygen species metabolic process)|go:"GO:1904408"(melatonin binding)|interpro:IPR006424(Glyceraldehyde-3-phosphate dehydrogenase, type I)|interpro:IPR020828|interpro:IPR020829|interpro:IPR020830|interpro:IPR020831|interpro:IPR036291|rcsb pdb:3PYM|rcsb pdb:4IQ8|reactome:R-SCE-70171|reactome:R-SCE-70263 - crc64:8580F0C58982D51E crc64:6CFFFEE7061BC36F figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:SCaeBRAWlROkzprJe0JgOB3lNZ0559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:P14540 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-2447|uniprotkb:D6VXM7|ensemblfungi:YKL060C psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:alf_yeast(display_long)|uniprotkb:FBA1(gene name)|psi-mi:FBA1(display_short)|uniprotkb:YKL320(orf name)|uniprotkb:Fructose-1,6-bisphosphate aldolase(gene name synonym)|uniprotkb:YKL060C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) refseq:NP_012863.1|sgd:S000001543|dip:DIP-4702N|mint:P14540|ensemblfungi:YKL060C(gene)|ensemblfungi:YKL060C_mRNA(transcript)|go:"GO:0004332"(fructose-bisphosphate aldolase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006094"(gluconeogenesis)|go:"GO:0006096"(glycolytic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:1904408"(melatonin binding)|interpro:IPR000771(Ketose-bisphosphate aldolase, class-II)|interpro:IPR006411(Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype)|interpro:IPR013785(Aldolase-type TIM barrel) - crc64:8580F0C58982D51E crc64:C67E61BA5C7E8E4C figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:gEr3mYQBb47yKJji/7xOsQjt3+Y559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:Q12460 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-17148|ensemblfungi:YLR197W|uniprotkb:D6VYK0 psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:nop56_yeast(display_long)|uniprotkb:SIK1(gene name synonym)|uniprotkb:Ribosome biosynthesis protein SIK1(gene name synonym)|uniprotkb:YLR197W(locus name)|uniprotkb:L8167.9(orf name)|uniprotkb:NOP56(gene name)|psi-mi:NOP56(display_short)|uniprotkb:Suppressor of I kappa b protein 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) ensemblfungi:YLR197W(gene)|ensemblfungi:YLR197W_mRNA(transcript)|go:"GO:0000154"(rRNA modification)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|refseq:NP_013298.1|sgd:S000004187|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-4405N|mint:Q12460 - crc64:8580F0C58982D51E crc64:F8522A5870EF4842 figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:l3UAmoOUECH1uov6nv7MSwSv/3s559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:P60010 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-2169|uniprotkb:P02579|uniprotkb:Q9P3X6|uniprotkb:Q9P3X7|uniprotkb:D6VTJ1|ensemblfungi:YFL039C psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:act_yeast(display_long)|uniprotkb:ACT1(gene name)|psi-mi:ACT1(display_short)|uniprotkb:ABY1(gene name synonym)|uniprotkb:END7(gene name synonym)|uniprotkb:YFL039C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) refseq:NP_116614.1|sgd:S000001855|dip:DIP-310N|mint:P60010|ensemblfungi:YFL039C(gene)|ensemblfungi:YFL039C_mRNA(transcript)|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000142"(cellular bud neck contractile ring)|go:"GO:0000812"(Swr1 complex)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005524"(ATP binding)|go:"GO:0005884"(actin filament)|go:"GO:0006281"(DNA repair)|go:"GO:0006897"(endocytosis)|go:"GO:0009306"(protein secretion)|go:"GO:0016573"(histone acetylation)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030476"(ascospore wall assembly)|go:"GO:0030479"(actin cortical patch)|go:"GO:0031011"(Ino80 complex)|go:"GO:0032432"(actin filament bundle)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:1902404"(mitotic actomyosin contractile ring contraction)|interpro:IPR004000(Actin/actin-like)|interpro:IPR004001(Actin, conserved site)|interpro:IPR020902|interpro:IPR043129|rcsb pdb:1YAG|rcsb pdb:1YVN|rcsb pdb:5NBL|rcsb pdb:5NBM|rcsb pdb:5NBN|rcsb pdb:5Y81|reactome:R-SCE-114608|reactome:R-SCE-190873|reactome:R-SCE-196025|reactome:R-SCE-2029482|reactome:R-SCE-5626467|reactome:R-SCE-5663213|reactome:R-SCE-8856828|reactome:R-SCE-8980692|reactome:R-SCE-9013026 - crc64:8580F0C58982D51E crc64:87AC19B0B0BC9E71 figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:yfgwiWq/Y0HviACqgjjUugpEKLw559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:P38164 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 - crc64:8580F0C58982D51E crc64:613630F9F41FF77C figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:Q08281 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) - crc64:8580F0C58982D51E - figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:P53011 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:8580F0C58982D51E crc64:EAF75B9DE074106B figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:P00950 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-13517|uniprotkb:Q02117|uniprotkb:D6VX45|ensemblfungi:YKL152C psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:pmg1_yeast(display_long)|uniprotkb:GPM1(gene name)|psi-mi:GPM1(display_short)|uniprotkb:GPM(gene name synonym)|uniprotkb:YKL152C(locus name)|uniprotkb:YKL607(orf name)|uniprotkb:Phosphoglyceromutase 1(gene name synonym)|uniprotkb:MPGM 1(gene name synonym)|uniprotkb:BPG-dependent PGAM 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) refseq:NP_012770.1|sgd:S000001635|go:"GO:0006096"(glycolytic process)|interpro:IPR001345(Phosphoglycerate/bisphosphoglycerate mutase)|interpro:IPR005952(Phosphoglycerate mutase 1)|interpro:IPR013078(Phosphoglycerate mutase)|interpro:IPR029033|rcsb pdb:1BQ3|rcsb pdb:1BQ4|rcsb pdb:1QHF|rcsb pdb:3PGM|rcsb pdb:4PGM|ensemblfungi:YKL152C(gene)|ensemblfungi:YKL152C_mRNA(transcript)|go:"GO:0004619"(phosphoglycerate mutase activity)|rcsb pdb:5PGM|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005829"(cytosol)|go:"GO:0006094"(gluconeogenesis)|mint:P00950|dip:DIP-6260N - crc64:8580F0C58982D51E crc64:45E1A9CCDBDC104D figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:O4lo573Bz6RNmbbe4HdKcMKVaA0559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:P25694 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-4308|ensemblfungi:YDL126C|uniprotkb:D6VRM4 psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:cdc48_yeast(display_long)|uniprotkb:CDC48(gene name)|psi-mi:CDC48(display_short)|uniprotkb:Cell division cycle protein 48(gene name synonym)|uniprotkb:Transitional endoplasmic reticulum ATPase homolog(gene name synonym)|uniprotkb:YDL126C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) refseq:NP_010157.1|sgd:S000002284|ensemblfungi:YDL126C(gene)|ensemblfungi:YDL126C_mRNA(transcript)|go:"GO:0000837"(Doa10p ubiquitin ligase complex)|dip:DIP-2704N|mint:P25694|go:"GO:0000839"(Hrd1p ubiquitin ligase ERAD-L complex)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006274"(DNA replication termination)|go:"GO:0010636"(positive regulation of mitochondrial fusion)|go:"GO:0016236"(macroautophagy)|go:"GO:0016320"(endoplasmic reticulum membrane fusion)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0019888"(protein phosphatase regulator activity)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030894"(replisome)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031134"(sister chromatid biorientation)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0034517"(ribophagy)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0036266"(Cdc48p-Npl4p-Vms1p AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0043328"(protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway)|go:"GO:0043332"(mating projection tip)|go:"GO:0043624"|go:"GO:0046034"(ATP metabolic process)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051974"(negative regulation of telomerase activity)|go:"GO:0070651"(nonfunctional rRNA decay)|go:"GO:0071629"(cytoplasm protein quality control by the ubiquitin-proteasome system)|go:"GO:0071630"(nuclear protein quality control by the ubiquitin-proteasome system)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0072671"(mitochondria-associated ubiquitin-dependent protein catabolic process)|go:"GO:0097352"(autophagosome maturation)|go:"GO:0120174"(stress-induced homeostatically regulated protein degradation pathway)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1900182"(positive regulation of protein localization to nucleus)|go:"GO:1990112"(RQC complex)|go:"GO:1990116"(ribosome-associated ubiquitin-dependent protein catabolic process)|go:"GO:1990171"(SCF complex disassembly in response to cadmium stress)|go:"GO:2001168"(positive regulation of histone H2B ubiquitination)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR015415(Vps4 oligomerisation, C-terminal)|interpro:IPR027417|interpro:IPR029067|interpro:IPR041569|rcsb pdb:6OA9|rcsb pdb:6OAA|rcsb pdb:6OAB|rcsb pdb:6OMB|rcsb pdb:6OPC|reactome:R-SCE-110320|reactome:R-SCE-3371511|reactome:R-SCE-532668|reactome:R-SCE-5358346|reactome:R-SCE-5689896|reactome:R-SCE-6798695|reactome:R-SCE-8876725 - crc64:8580F0C58982D51E crc64:02ADDB9A227614D8 figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:qM/04kWcyjkQ3QCa3WklyvhNigE559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:P16140 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-20254|uniprotkb:P32123|uniprotkb:D6VQC4|ensemblfungi:YBR127C psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:vatb_yeast(display_long)|uniprotkb:VMA2(gene name)|psi-mi:VMA2(display_short)|uniprotkb:Vacuolar proton pump subunit B(gene name synonym)|uniprotkb:V-ATPase 57 kDa subunit(gene name synonym)|uniprotkb:VAT2(gene name synonym)|uniprotkb:YBR1002(orf name)|uniprotkb:YBR127C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) sgd:S000000331|refseq:NP_009685.3|ensemblfungi:YBR127C(gene)|ensemblfungi:YBR127C_mRNA(transcript)|go:"GO:0000221"(vacuolar proton-transporting V-type ATPase, V1 domain)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000425"(pexophagy)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006874"(cellular calcium ion homeostasis)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0016787"(hydrolase activity)|go:"GO:0046034"(ATP metabolic process)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|go:"GO:0055085"(transmembrane transport)|go:"GO:1902906"(proteasome storage granule assembly)|go:"GO:1990816"(vacuole-mitochondrion membrane contact site)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005723(ATPase, V1 complex, subunit B)|interpro:IPR020003|interpro:IPR022879|interpro:IPR027417|rcsb pdb:3J9T|rcsb pdb:3J9U|rcsb pdb:3J9V|rcsb pdb:5BW9|rcsb pdb:5D80|rcsb pdb:5VOX|rcsb pdb:5VOY|rcsb pdb:5VOZ|rcsb pdb:6O7V|rcsb pdb:6O7W|rcsb pdb:6O7X|reactome:R-SCE-1222556|reactome:R-SCE-77387|reactome:R-SCE-917977|reactome:R-SCE-9639288|dip:DIP-2292N|mint:P16140 - crc64:8580F0C58982D51E crc64:02A7DEC571EFF7C2 figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:plrXuzL+4el/8brAJsClEbg+p0E559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:P39923 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N - crc64:8580F0C58982D51E crc64:58CA4983B0BAF7BA figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:Q03897 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 - crc64:8580F0C58982D51E crc64:D6A137FB0FDE2816 figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:P47170 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) - crc64:8580F0C58982D51E crc64:BB8E73FF5B70CCDF figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38742 uniprotkb:P27476 intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C intact:EBI-12274|ensemblfungi:YGR159C|uniprotkb:D6VUT9 psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:nsr1_yeast(display_long)|uniprotkb:NSR1(gene name)|psi-mi:NSR1(display_short)|uniprotkb:YGR159C(locus name)|uniprotkb:G7001(orf name)|uniprotkb:p67(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819915|imex:IM-23164-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) ensemblfungi:YGR159C(gene)|ensemblfungi:YGR159C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034276|interpro:IPR035979|interpro:IPR034272|refseq:NP_011675.1|sgd:S000003391|mint:P27476|dip:DIP-5537N - crc64:8580F0C58982D51E crc64:90DEEE7BBC20BC0C figure legend:Figure 1 A, Track 8, Supp. Table 3 and Supp Fig. 2 Track 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 rogid:q0/AgJC55iTpn/5kCsxal2kQ7Ls559292 intact-crc:393A2B49E19A66BD|rigid:RkxrqXRO0AVK7d/czZRJoZzmDgM false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:Q12499 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-12126|uniprotkb:D6W309|ensemblfungi:YOR310C psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:nop58_yeast(display_long)|uniprotkb:Nucleolar protein 5(gene name synonym)|uniprotkb:NOP58(gene name)|psi-mi:NOP58(display_short)|uniprotkb:NOP5(gene name synonym)|uniprotkb:YOR310C(locus name)|uniprotkb:O6108(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) ensemblfungi:YOR310C(gene)|ensemblfungi:YOR310C_mRNA(transcript)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0017069"(snRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:1902570"(protein localization to nucleolus)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-4570464|reactome:R-SCE-6791226|rcsb pdb:6ZQC|refseq:NP_014955.1|sgd:S000005837|dip:DIP-5843N|mint:Q12499 - - crc64:8A2889448B2A19E2 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:Dtk1A6GOVO3KgTak8cTHjO+eDQ4559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P06634 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-5744|uniprotkb:D6W2R0|ensemblfungi:YOR204W psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:ded1_yeast(display_long)|uniprotkb:DED1(gene name)|psi-mi:DED1(display_short)|uniprotkb:SPP81(gene name synonym)|uniprotkb:YOR204W(locus name)|uniprotkb:DEAD box protein 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) sgd:S000005730|refseq:NP_014847.3|dip:DIP-5820N|mint:P06634|ensemblfungi:YOR204W(gene)|ensemblfungi:YOR204W_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006413"(translational initiation)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0031370"(eukaryotic initiation factor 4G binding)|go:"GO:0033592"(RNA strand annealing activity)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1901195"(positive regulation of formation of translation preinitiation complex)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR044763|reactome:R-SCE-6798695 - - crc64:B6722D94C03BFA4B figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:FkldumX6m5gBuuaG09aTJ0kuMZM559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:Q05022 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-16011|uniprotkb:D6W054|ensemblfungi:YMR229C psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:rrp5_yeast(display_long)|uniprotkb:RRP5(gene name)|psi-mi:RRP5(display_short)|uniprotkb:FMI1(gene name synonym)|uniprotkb:YMR229C(locus name)|uniprotkb:YM9959.11C(orf name)|uniprotkb:Ribosomal RNA-processing protein 5(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein RRP5(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_013956.1|sgd:S000004842|ensemblfungi:YMR229C(gene)|ensemblfungi:YMR229C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034463"(90S preribosome assembly)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0034513"(box H/ACA snoRNA binding)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR003029(S1, RNA binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR022967|rcsb pdb:5C9S|rcsb pdb:5NLG|rcsb pdb:5WLC|rcsb pdb:5WWM|rcsb pdb:5WYJ|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-6535N|mint:Q05022 - - crc64:39BF46E5587B3B0A figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:FUIsTk3NLRDu8llnVgX5cDLAbB8559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P05030 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-13501|uniprotkb:D6VUC9|ensemblfungi:YGL008C psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:pma1_yeast(display_long)|uniprotkb:PMA1(gene name)|psi-mi:PMA1(display_short)|uniprotkb:Proton pump 1(gene name synonym)|uniprotkb:YGL008C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_011507.1|sgd:S000002976|interpro:IPR023214|interpro:IPR023298|interpro:IPR023299|interpro:IPR036412|interpro:IPR044492|ensemblfungi:YGL008C(gene)|ensemblfungi:YGL008C_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0008553"(P-type proton-exporting transporter activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0045121"(membrane raft)|go:"GO:0046872"(metal ion binding)|go:"GO:0051453"(regulation of intracellular pH)|go:"GO:0055085"(transmembrane transport)|go:"GO:0120029"(proton export across plasma membrane)|go:"GO:1902600"(proton transmembrane transport)|go:"GO:1902906"(proteasome storage granule assembly)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001757(ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter)|interpro:IPR004014(ATPase, P-type cation-transporter, N-terminal)|interpro:IPR006534(Plasma-membrane proton-efflux P-type ATPase)|interpro:IPR008250(E1-E2 ATPase-associated region)|interpro:IPR018303|mint:P05030|dip:DIP-2537N - - crc64:AA1E93966B37E8E1 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:TMBBGdTUobxIviFblM9X/errjvw559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:Q12464 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-31814|uniprotkb:D6W3D5|ensemblfungi:YPL235W psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:ruvb2_yeast(display_long)|uniprotkb:TIP49-homology protein 2(gene name synonym)|uniprotkb:TIP49b homolog(gene name synonym)|uniprotkb:RVB2(gene name)|psi-mi:RVB2(display_short)|uniprotkb:TIH2(gene name synonym)|uniprotkb:TIP49B(gene name synonym)|uniprotkb:YPL235W(locus name)|uniprotkb:P1060(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_015089.1|sgd:S000006156|dip:DIP-5207N|mint:Q12464|ensemblfungi:YPL235W(gene)|ensemblfungi:YPL235W_mRNA(transcript)|go:"GO:0000492"(box C/D snoRNP assembly)|go:"GO:0000812"(Swr1 complex)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006281"(DNA repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006364"(rRNA processing)|go:"GO:0016573"(histone acetylation)|go:"GO:0031011"(Ino80 complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0043138"(3'-5' DNA helicase activity)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0043486"(histone exchange)|go:"GO:0070209"(ASTRA complex)|go:"GO:0097255"(R2TP complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR010339(TIP49, C-terminal)|interpro:IPR027238|interpro:IPR027417|interpro:IPR037942|interpro:IPR041048|interpro:IPR042487|rcsb pdb:5OUN|rcsb pdb:6GEJ|rcsb pdb:6GEN - - crc64:0D8EFBA7EC711AB8 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:+msMK6AgZ+aJt0cpuIV7g6JtWr4559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P53131 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131 - - crc64:DA8A085EC50FF430 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P60010 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-2169|uniprotkb:P02579|uniprotkb:Q9P3X6|uniprotkb:Q9P3X7|uniprotkb:D6VTJ1|ensemblfungi:YFL039C psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:act_yeast(display_long)|uniprotkb:ACT1(gene name)|psi-mi:ACT1(display_short)|uniprotkb:ABY1(gene name synonym)|uniprotkb:END7(gene name synonym)|uniprotkb:YFL039C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_116614.1|sgd:S000001855|dip:DIP-310N|mint:P60010|ensemblfungi:YFL039C(gene)|ensemblfungi:YFL039C_mRNA(transcript)|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000142"(cellular bud neck contractile ring)|go:"GO:0000812"(Swr1 complex)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005524"(ATP binding)|go:"GO:0005884"(actin filament)|go:"GO:0006281"(DNA repair)|go:"GO:0006897"(endocytosis)|go:"GO:0009306"(protein secretion)|go:"GO:0016573"(histone acetylation)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030476"(ascospore wall assembly)|go:"GO:0030479"(actin cortical patch)|go:"GO:0031011"(Ino80 complex)|go:"GO:0032432"(actin filament bundle)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:1902404"(mitotic actomyosin contractile ring contraction)|interpro:IPR004000(Actin/actin-like)|interpro:IPR004001(Actin, conserved site)|interpro:IPR020902|interpro:IPR043129|rcsb pdb:1YAG|rcsb pdb:1YVN|rcsb pdb:5NBL|rcsb pdb:5NBM|rcsb pdb:5NBN|rcsb pdb:5Y81|reactome:R-SCE-114608|reactome:R-SCE-190873|reactome:R-SCE-196025|reactome:R-SCE-2029482|reactome:R-SCE-5626467|reactome:R-SCE-5663213|reactome:R-SCE-8856828|reactome:R-SCE-8980692|reactome:R-SCE-9013026 - - crc64:87AC19B0B0BC9E71 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:yfgwiWq/Y0HviACqgjjUugpEKLw559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P27476 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-12274|ensemblfungi:YGR159C|uniprotkb:D6VUT9 psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:nsr1_yeast(display_long)|uniprotkb:NSR1(gene name)|psi-mi:NSR1(display_short)|uniprotkb:YGR159C(locus name)|uniprotkb:G7001(orf name)|uniprotkb:p67(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) ensemblfungi:YGR159C(gene)|ensemblfungi:YGR159C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034276|interpro:IPR035979|interpro:IPR034272|refseq:NP_011675.1|sgd:S000003391|mint:P27476|dip:DIP-5537N - - crc64:90DEEE7BBC20BC0C figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:q0/AgJC55iTpn/5kCsxal2kQ7Ls559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P50095 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-9190|ensemblfungi:YLR432W|uniprotkb:D6VZ67 psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:imdh3_yeast(display_long)|uniprotkb:IMD3(gene name)|psi-mi:IMD3(display_short)|uniprotkb:L9753.4(orf name)|uniprotkb:YLR432W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) ensemblfungi:YLR432W(gene)|ensemblfungi:YLR432W_mRNA(transcript)|go:"GO:0000166"(nucleotide binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003938"(IMP dehydrogenase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006177"(GMP biosynthetic process)|go:"GO:0006183"(GTP biosynthetic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR000644(Cystathionine beta-synthase, core)|interpro:IPR001093(IMP dehydrogenase/GMP reductase)|interpro:IPR005990(IMP dehydrogenase)|interpro:IPR013785(Aldolase-type TIM barrel)|interpro:IPR015875(IMP dehydrogenase / GMP reductase, conserved site)|reactome:R-SCE-6798695|reactome:R-SCE-73817|refseq:NP_013536.3|sgd:S000004424|dip:DIP-1947N|mint:P50095 - - crc64:A0C84C22527AAEA6 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:UUEyn+zhL8Z1aasK3r/inGhtO1c559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P38873 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-24864|uniprotkb:D3DLD4|ensemblfungi:YHR186C psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:kog1_yeast(display_long)|uniprotkb:Kontroller of growth protein 1(gene name synonym)|uniprotkb:Local anesthetic-sensitive protein 24(gene name synonym)|uniprotkb:YHR186C(locus name)|uniprotkb:KOG1(gene name)|psi-mi:KOG1(display_short)|uniprotkb:LAS24(gene name synonym)|uniprotkb:H9998.14(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_012056.1|sgd:S000001229|mint:P38873|dip:DIP-2639N|ensemblfungi:YHR186C(gene)|ensemblfungi:YHR186C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031929"(TOR signaling)|go:"GO:0031931"(TORC1 complex)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0071230"(cellular response to amino acid stimulus)|go:"GO:0071902"(positive regulation of protein serine/threonine kinase activity)|interpro:IPR000357(HEAT)|interpro:IPR001680(WD40 repeat)|interpro:IPR004083(Regulatory associated protein of TOR)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR029347|interpro:IPR036322|reactome:R-SCE-3371571|reactome:R-SCE-9639288 - - crc64:B927EE93700176D3 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:8fDDVTuayLjREVAHrrpxJ9ExeCM559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P21576 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-20460|uniprotkb:D6VXT7|ensemblfungi:YKR001C psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:vps1_yeast(display_long)|uniprotkb:VPS1(gene name)|psi-mi:VPS1(display_short)|uniprotkb:LAM1(gene name synonym)|uniprotkb:SPO15(gene name synonym)|uniprotkb:YKR001C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_012926.1|sgd:S000001709|ensemblfungi:YKR001C(gene)|ensemblfungi:YKR001C_mRNA(transcript)|go:"GO:0000266"(mitochondrial fission)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0003374"(dynamin family protein polymerization involved in mitochondrial fission)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005770"(late endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005829"(cytosol)|go:"GO:0005874"(microtubule)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006897"(endocytosis)|go:"GO:0007031"(peroxisome organization)|go:"GO:0007034"(vacuolar transport)|go:"GO:0008017"(microtubule binding)|go:"GO:0016020"(membrane)|go:"GO:0016559"(peroxisome fission)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030479"(actin cortical patch)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0051301"(cell division)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0060988"(lipid tube assembly)|go:"GO:0061025"(membrane fusion)|interpro:IPR000375(Dynamin central region)|interpro:IPR001401(Dynamin, GTPase region)|interpro:IPR003130(Dynamin GTPase effector)|interpro:IPR019762|interpro:IPR020850|interpro:IPR022812|interpro:IPR027417|interpro:IPR030381|reactome:R-SCE-169911|reactome:R-SCE-190873|reactome:R-SCE-196025|reactome:R-SCE-75153|reactome:R-SCE-8856828|dip:DIP-6290N|mint:P21576 - - crc64:D9AB527C04B3A977 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:/ucK+w1ANSorx3DQ+hTcT2UMgYg559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P15424 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-11308|ensemblfungi:YDR194C|uniprotkb:D6VSH6 psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:ms116_yeast(display_long)|uniprotkb:MSS116(gene name)|psi-mi:MSS116(display_short)|uniprotkb:YD9346.05C(orf name)|uniprotkb:YDR194C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) ensemblfungi:YDR194C(gene)|ensemblfungi:YDR194C_mRNA(transcript)|go:"GO:0000372"(Group I intron splicing)|go:"GO:0000373"(Group II intron splicing)|go:"GO:0000963"(mitochondrial RNA processing)|go:"GO:0003723"(RNA binding)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|rcsb pdb:3I5X|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|rcsb pdb:3I5Y|rcsb pdb:3I61|rcsb pdb:3I62|rcsb pdb:3SQW|rcsb pdb:3SQX|rcsb pdb:4DB2|rcsb pdb:4DB4|rcsb pdb:4TYN|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006364"(rRNA processing)|rcsb pdb:4TYW|rcsb pdb:4TYY|rcsb pdb:4TZ0|go:"GO:0006392"(transcription elongation from mitochondrial promoter)|go:"GO:0006397"(mRNA processing)|rcsb pdb:4TZ6|go:"GO:0006417"(regulation of translation)|go:"GO:0033592"(RNA strand annealing activity)|go:"GO:0034337"(RNA folding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_010480.1|sgd:S000002602|dip:DIP-5368N - - crc64:DAEECCA4ED0CB2BE figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:J1APSuvs6ka/ROwKuDW61gTWdTc559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P15646 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - - crc64:56A8B958A7B6066E figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P22336 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-14971|uniprotkb:P38906|uniprotkb:D6VPL9|ensemblfungi:YAR007C psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:rfa1_yeast(display_long)|uniprotkb:RFA1(gene name)|psi-mi:RFA1(display_short)|uniprotkb:BUF2(gene name synonym)|uniprotkb:YAR007C(locus name)|uniprotkb:FUN3(orf name)|uniprotkb:Replication protein A 69 kDa DNA-binding subunit(gene name synonym)|uniprotkb:Single-stranded DNA-binding protein(gene name synonym)|uniprotkb:DNA-binding protein BUF2(gene name synonym)|uniprotkb:RPA1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_009404.1|sgd:S000000065|reactome:R-SCE-5656121|reactome:R-SCE-5656169|reactome:R-SCE-5696397|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-68962|reactome:R-SCE-69166|reactome:R-SCE-5655862|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|ensemblfungi:YAR007C(gene)|ensemblfungi:YAR007C_mRNA(transcript)|go:"GO:0000722"(telomere maintenance via recombination)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0006260"(DNA replication)|go:"GO:0000794"(condensed nuclear chromosome)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0006265"(DNA topological change)|go:"GO:0006268"(DNA unwinding involved in DNA replication)|go:"GO:0006281"(DNA repair)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006312"(mitotic recombination)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0007004"(telomere maintenance via telomerase)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005662"(DNA replication factor A complex)|go:"GO:0007131"(reciprocal meiotic recombination)|go:"GO:0010833"(telomere maintenance via telomere lengthening)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030491"(heteroduplex formation)|go:"GO:0043047"(single-stranded telomeric DNA binding)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0043934"(sporulation)|go:"GO:0045184"(establishment of protein localization)|go:"GO:0046872"(metal ion binding)|go:"GO:0051321"(meiotic cell cycle)|interpro:IPR004365(Nucleic acid binding, OB-fold, tRNA/helicase-type)|interpro:IPR004591(Replication factor-a protein 1 Rpa1)|interpro:IPR007199(Replication factor-A protein 1, N-terminal)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR013955(Replication factor-A, C-terminal)|interpro:IPR031657|rcsb pdb:1YNX|rcsb pdb:5M1X|rcsb pdb:5OMB|rcsb pdb:5OMC|rcsb pdb:6I52|reactome:R-SCE-110312|reactome:R-SCE-110320|reactome:R-SCE-176187|dip:DIP-2512N|mint:P22336 - - crc64:7EB8DFA6910EF8A8 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:g7zFw4pOaeYLHSwBeKICZVqA13I559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P38164 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 - - crc64:613630F9F41FF77C figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:Q06205 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-6956|uniprotkb:D6VZ83|ensemblfungi:YLR449W psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:fkbp4_yeast(display_long)|uniprotkb:FPR4(gene name)|psi-mi:FPR4(display_short)|uniprotkb:YLR449W(locus name)|uniprotkb:L9324.3(orf name)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Rotamase(gene name synonym)|uniprotkb:Histone proline isomerase(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) sgd:S000004441|refseq:NP_013554.3|dip:DIP-909N|mint:Q06205|ensemblfungi:YLR449W(gene)|ensemblfungi:YLR449W_mRNA(transcript)|go:"GO:0000412"(histone peptidyl-prolyl isomerization)|go:"GO:0000415"(negative regulation of histone H3-K36 methylation)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|rcsb pdb:4BF8 - - crc64:CF90C6714F04572E figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:rDmDSGEgRbtgkLBoJTzmzxxY7B4559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P32787 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-10299|ensemblfungi:YJR144W|uniprotkb:D6VWW3 psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:mg101_yeast(display_long)|uniprotkb:MGM101(gene name)|psi-mi:MGM101(display_short)|uniprotkb:MGM9(gene name synonym)|uniprotkb:YJR144W(locus name)|uniprotkb:J2181(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_012678.1|sgd:S000003905|ensemblfungi:YJR144W(gene)|ensemblfungi:YJR144W_mRNA(transcript)|go:"GO:0000002"(mitochondrial genome maintenance)|go:"GO:0000262"(mitochondrial chromosome)|go:"GO:0000725"(recombinational repair)|go:"GO:0003677"(DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006281"(DNA repair)|go:"GO:0036297"(interstrand cross-link repair)|go:"GO:0042645"(mitochondrial nucleoid)|interpro:IPR009446(Mitochondrial genome maintenance MGM101)|dip:DIP-5044N - - crc64:E14C17F2E837D6F0 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:kuFUiWOdeQ0qj6inlmJdWNnZMfs559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:Q12159 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-29516|uniprotkb:D6VT14|ensemblfungi:YDR381W psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:yra1_yeast(display_long)|uniprotkb:YRA1(gene name)|psi-mi:YRA1(display_short)|uniprotkb:D9481.2(orf name)|uniprotkb:D9509.1(orf name)|uniprotkb:YDR381W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_010669.1|sgd:S000002789|dip:DIP-1791N|mint:Q12159|ensemblfungi:YDR381W(gene)|ensemblfungi:YDR381W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0003723"(RNA binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0043462"(regulation of ATP-dependent activity)|go:"GO:1902281"(negative regulation of RNA helicase activity)|go:"GO:1990119"(RNA helicase inhibitor activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034357|interpro:IPR035979|rcsb pdb:5SUP - - crc64:480B5B6DC0D14BE9 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:pLiU4X4uQRi7nw6fxaSJW7Ppum4559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P02829 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-8659|ensemblfungi:YPL240C|uniprotkb:D6W3D1 psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:hsp82_yeast(display_long)|uniprotkb:HSP90(gene name synonym)|uniprotkb:YPL240C(locus name)|uniprotkb:HSP82(gene name)|psi-mi:HSP82(display_short)|uniprotkb:Heat shock protein Hsp90 heat-inducible isoform(gene name synonym)|uniprotkb:82 kDa heat shock protein(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) ensemblfungi:YPL240C(gene)|ensemblfungi:YPL240C_mRNA(transcript)|go:"GO:0000492"(box C/D snoRNP assembly)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006458"('de novo' protein folding)|go:"GO:0006626"(protein targeting to mitochondrion)|go:"GO:0006970"(response to osmotic stress)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0032204"(regulation of telomere maintenance)|go:"GO:0032212"(positive regulation of telomere maintenance via telomerase)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034605"(cellular response to heat)|go:"GO:0042026"(protein refolding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043248"(proteasome assembly)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050821"(protein stabilization)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051604"(protein maturation)|interpro:IPR001404(Heat shock protein Hsp90)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR019805|interpro:IPR020568|interpro:IPR020575|interpro:IPR036890|interpro:IPR037196|rcsb pdb:1A4H|rcsb pdb:1AH6|rcsb pdb:1AH8|rcsb pdb:1AM1|rcsb pdb:1AMW|rcsb pdb:1BGQ|rcsb pdb:2WER|rcsb pdb:2XD6|rcsb pdb:2XX2|rcsb pdb:2XX4|rcsb pdb:2XX5|rcsb pdb:2YGA|rcsb pdb:2YGE|rcsb pdb:2YGF|rcsb pdb:3C0E|rcsb pdb:3C11|rcsb pdb:3FP2|rcsb pdb:4AS9|rcsb pdb:4ASA|rcsb pdb:4ASB|rcsb pdb:4ASF|rcsb pdb:2IWU|rcsb pdb:2IWX|rcsb pdb:2LSV|rcsb pdb:2VW5|rcsb pdb:2VWC|rcsb pdb:2WEP|rcsb pdb:4ASG|rcsb pdb:4CE1|rcsb pdb:4CE2|rcsb pdb:4CE3|rcsb pdb:5MGX|reactome:R-SCE-1474151|rcsb pdb:2WEQ|reactome:R-SCE-203615|reactome:R-SCE-3371497|reactome:R-SCE-3371511|reactome:R-SCE-3371571|reactome:R-SCE-5218920|reactome:R-SCE-6798695|reactome:R-SCE-844456|reactome:R-SCE-9009391|rcsb pdb:1HK7|rcsb pdb:1US7|rcsb pdb:1USU|rcsb pdb:1USV|rcsb pdb:1ZW9|rcsb pdb:1ZWH|rcsb pdb:2AKP|rcsb pdb:2BRC|rcsb pdb:2BRE|rcsb pdb:2CG9|rcsb pdb:2CGE|rcsb pdb:2CGF|rcsb pdb:2FXS|rcsb pdb:2IWS|refseq:NP_015084.1|sgd:S000006161|mint:P02829|dip:DIP-2262N - - crc64:D7C35676D668FB63 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:K7/2Z6pLnYGlRxPVLyePuy/ECrk559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P53011 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - - crc64:EAF75B9DE074106B figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P06778 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-14719|ensemblfungi:YML032C|uniprotkb:D6VZE2 psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:rad52_yeast(display_long)|uniprotkb:YML032C(locus name)|uniprotkb:RAD52(gene name)|psi-mi:RAD52(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) ensemblfungi:YML032C_mRNA(transcript)|go:"GO:0000150"(DNA strand exchange activity)|go:"GO:0000228"(nuclear chromosome)|go:"GO:0000709"(meiotic joint molecule formation)|go:"GO:0000722"(telomere maintenance via recombination)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000727"(double-strand break repair via break-induced replication)|ensemblfungi:YML032C(gene)|go:"GO:0000730"(DNA recombinase assembly)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006277"(DNA amplification)|go:"GO:0006301"(postreplication repair)|go:"GO:0006312"(mitotic recombination)|go:"GO:0043504"(mitochondrial DNA repair)|go:"GO:0045002"(double-strand break repair via single-strand annealing)|go:"GO:1904877"(positive regulation of DNA ligase activity)|go:"GO:1990814"(DNA/DNA annealing activity)|interpro:IPR004585(Recombination protein Rad52)|interpro:IPR007232(Rad52/22 double-strand break repair protein)|interpro:IPR041247|interpro:IPR042525|reactome:R-SCE-3108214|reactome:R-SCE-5685938|refseq:NP_013680.2|sgd:S000004494|dip:DIP-3N|mint:P06778 - - crc64:4F5D07480A05B564 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:5TMIwryr0SiR5WDNnXFVoXSqRIc559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P35169 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-19374|uniprotkb:D6VWN7|ensemblfungi:YJR066W psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:tor1_yeast(display_long)|uniprotkb:DRR1(gene name synonym)|uniprotkb:TOR1(gene name)|psi-mi:TOR1(display_short)|uniprotkb:YJR066W(locus name)|uniprotkb:J1803(orf name)|uniprotkb:Phosphatidylinositol kinase homolog TOR1(gene name synonym)|uniprotkb:Target of rapamycin kinase 1(gene name synonym)|uniprotkb:Dominant rapamycin resistance protein 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_012600.1|sgd:S000003827|rcsb pdb:2KIT|reactome:R-SCE-1257604|reactome:R-SCE-3371571|reactome:R-SCE-389357|reactome:R-SCE-5218920|reactome:R-SCE-6804757|reactome:R-SCE-9639288|ensemblfungi:YJR066W(gene)|ensemblfungi:YJR066W_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006413"(translational initiation)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0010008"(endosome membrane)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0016242"(negative regulation of macroautophagy)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0031234"(extrinsic component of cytoplasmic side of plasma membrane)|go:"GO:0031505"(fungal-type cell wall organization)|go:"GO:0031929"(TOR signaling)|go:"GO:0031930"(mitochondria-nucleus signaling pathway)|go:"GO:0031931"(TORC1 complex)|go:"GO:0031932"(TORC2 complex)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0034605"(cellular response to heat)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042790"(nucleolar large rRNA transcription by RNA polymerase I)|go:"GO:0044387"(negative regulation of protein kinase activity by regulation of protein phosphorylation)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0090153"(regulation of sphingolipid biosynthetic process)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1905356"(regulation of snRNA pseudouridine synthesis)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR003151(PIK-related kinase, FAT)|interpro:IPR003152(PIK-related kinase, FATC)|interpro:IPR009076(FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR014009(PIK-related kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR024585|interpro:IPR026683|interpro:IPR036738|interpro:IPR036940|rcsb pdb:1W1N|rcsb pdb:2KIO|dip:DIP-917N|mint:P35169 - - crc64:ACB1781B9963BB1E figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:3aJf92VnNYbaZZj1+i3uk/IvNQI559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:Q03940 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-30712|uniprotkb:D6VSH3|ensemblfungi:YDR190C psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:ruvb1_yeast(display_long)|uniprotkb:RVB1(gene name)|psi-mi:RVB1(display_short)|uniprotkb:TIP49-homology protein 1(gene name synonym)|uniprotkb:TIP49a homolog(gene name synonym)|uniprotkb:TIH1(gene name synonym)|uniprotkb:TIP49A(gene name synonym)|uniprotkb:YDR190C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_010476.1|sgd:S000002598|dip:DIP-4896N|mint:Q03940|ensemblfungi:YDR190C(gene)|ensemblfungi:YDR190C_mRNA(transcript)|go:"GO:0000492"(box C/D snoRNP assembly)|go:"GO:0000812"(Swr1 complex)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006281"(DNA repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0031011"(Ino80 complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0043486"(histone exchange)|go:"GO:0070209"(ASTRA complex)|go:"GO:0097255"(R2TP complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR010339(TIP49, C-terminal)|interpro:IPR027238|interpro:IPR027417|interpro:IPR037938|interpro:IPR041048|rcsb pdb:6GEJ|rcsb pdb:6GEN|reactome:R-SCE-5689880 - - crc64:93D6ECB7006AF0F2 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:tVQiqr2rPrfXb1Wb/2XUOTBBXIQ559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:Q12460 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-17148|ensemblfungi:YLR197W|uniprotkb:D6VYK0 psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:nop56_yeast(display_long)|uniprotkb:SIK1(gene name synonym)|uniprotkb:Ribosome biosynthesis protein SIK1(gene name synonym)|uniprotkb:YLR197W(locus name)|uniprotkb:L8167.9(orf name)|uniprotkb:NOP56(gene name)|psi-mi:NOP56(display_short)|uniprotkb:Suppressor of I kappa b protein 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) ensemblfungi:YLR197W(gene)|ensemblfungi:YLR197W_mRNA(transcript)|go:"GO:0000154"(rRNA modification)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|refseq:NP_013298.1|sgd:S000004187|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-4405N|mint:Q12460 - - crc64:F8522A5870EF4842 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:l3UAmoOUECH1uov6nv7MSwSv/3s559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P38742 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - - crc64:8580F0C58982D51E figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P29295 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-8536|uniprotkb:D6W3G5|ensemblfungi:YPL204W psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:hrr25_yeast(display_long)|uniprotkb:YPL204W(locus name)|uniprotkb:HRR25(gene name)|psi-mi:HRR25(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_015120.1|sgd:S000006125|mint:P29295|dip:DIP-157N|ensemblfungi:YPL204W(gene)|ensemblfungi:YPL204W_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000775"(chromosome, centromeric region)|go:"GO:0002098"(tRNA wobble uridine modification)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004713"(protein tyrosine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005816"(spindle pole body)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006281"(DNA repair)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018108"(peptidyl-tyrosine phosphorylation)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0033551"(monopolin complex)|go:"GO:0038083"(peptidyl-tyrosine autophosphorylation)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0051455"(monopolar spindle attachment to meiosis I kinetochore)|go:"GO:0060628"(regulation of ER to Golgi vesicle-mediated transport)|go:"GO:0106214"(regulation of vesicle fusion with Golgi apparatus)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:2000370"(positive regulation of clathrin-dependent endocytosis)|go:"GO:2000785"(regulation of autophagosome assembly)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR030509|rcsb pdb:4XHL|rcsb pdb:5CYZ|rcsb pdb:5CZO|reactome:R-SCE-204005|reactome:R-SCE-6791226|reactome:R-SCE-9013405 - - crc64:C4D3107A470E8BAF figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:tS44OZjZHYS5GJDZM43ljVtw9SA559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P47170 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) - - crc64:BB8E73FF5B70CCDF figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P41318 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-28598|uniprotkb:D6W1H1|ensemblfungi:YNL006W psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:lst8_yeast(display_long)|uniprotkb:Lethal with SEC13 protein 8(gene name synonym)|uniprotkb:YNL006W(locus name)|uniprotkb:N2005(orf name)|uniprotkb:LST8(gene name)|psi-mi:LST8(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) reactome:R-SCE-3371571|sgd:S000004951|refseq:NP_014392.3|dip:DIP-5318N|reactome:R-SCE-1257604|reactome:R-SCE-389357|reactome:R-SCE-5218920|reactome:R-SCE-6804757|reactome:R-SCE-9639288|ensemblfungi:YNL006W(gene)|ensemblfungi:YNL006W_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005829"(cytosol)|go:"GO:0007165"(signal transduction)|go:"GO:0010008"(endosome membrane)|go:"GO:0030295"(protein kinase activator activity)|go:"GO:0030950"(establishment or maintenance of actin cytoskeleton polarity)|go:"GO:0031234"(extrinsic component of cytoplasmic side of plasma membrane)|go:"GO:0031505"(fungal-type cell wall organization)|go:"GO:0031929"(TOR signaling)|go:"GO:0031930"(mitochondria-nucleus signaling pathway)|go:"GO:0031931"(TORC1 complex)|go:"GO:0031932"(TORC2 complex)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0034399"(nuclear periphery)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|interpro:IPR037588|rcsb pdb:6EMK - - crc64:536AA1DB8E8151F0 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:DJkTl61Tdn8EtP/6tE7UFerq8w0559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P14540 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-2447|uniprotkb:D6VXM7|ensemblfungi:YKL060C psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:alf_yeast(display_long)|uniprotkb:FBA1(gene name)|psi-mi:FBA1(display_short)|uniprotkb:YKL320(orf name)|uniprotkb:Fructose-1,6-bisphosphate aldolase(gene name synonym)|uniprotkb:YKL060C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_012863.1|sgd:S000001543|dip:DIP-4702N|mint:P14540|ensemblfungi:YKL060C(gene)|ensemblfungi:YKL060C_mRNA(transcript)|go:"GO:0004332"(fructose-bisphosphate aldolase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006094"(gluconeogenesis)|go:"GO:0006096"(glycolytic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:1904408"(melatonin binding)|interpro:IPR000771(Ketose-bisphosphate aldolase, class-II)|interpro:IPR006411(Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype)|interpro:IPR013785(Aldolase-type TIM barrel) - - crc64:C67E61BA5C7E8E4C figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:gEr3mYQBb47yKJji/7xOsQjt3+Y559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P0CS90 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-8637|uniprotkb:D6VWL6|uniprotkb:P12398|ensemblfungi:YJR045C psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:hsp77_yeast(display_long)|uniprotkb:ENS1(gene name synonym)|uniprotkb:SSC1(gene name)|psi-mi:SSC1(display_short)|uniprotkb:YJR045C(locus name)|uniprotkb:J1639(orf name)|uniprotkb:mtHSP70(gene name synonym)|uniprotkb:Endonuclease SceI 75 kDa subunit(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) sgd:S000003806|refseq:NP_012579.1|interpro:IPR012725(Chaperone DnaK)|interpro:IPR013126(Heat shock protein 70)|interpro:IPR018181|interpro:IPR029047|interpro:IPR029048|mint:P0CS90|interpro:IPR043129|ensemblfungi:YJR045C(gene)|ensemblfungi:YJR045C_mRNA(transcript)|go:"GO:0001405"(PAM complex, Tim23 associated import motor)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0008566"(mitochondrial protein-transporting ATPase activity)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030150"(protein import into mitochondrial matrix)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0032079"(positive regulation of endodeoxyribonuclease activity)|go:"GO:0034620"(cellular response to unfolded protein)|go:"GO:0042026"(protein refolding)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051085"(chaperone cofactor-dependent protein refolding)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity) - - caution:This sequence has been withdrawn from Uniprot.|crc64:1E5672E76FCE24AC figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:jwa3ppE0voBqzfZAuY/E52tYrrw559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:Q03897 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 - - crc64:D6A137FB0FDE2816 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:Q04491 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - - crc64:A94388B4B9CB77FE figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P32445 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-15206|uniprotkb:O11851|uniprotkb:D6VR39|ensemblfungi:YCR028C-A psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:rim1_yeast(display_long)|uniprotkb:RIM1(gene name)|psi-mi:RIM1(display_short)|uniprotkb:YCR028C-A(locus name)|uniprotkb:YCR28C-A(orf name)|uniprotkb:Mitochondrial ssDNA-binding protein(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_009958.2|sgd:S000007222|ensemblfungi:YCR028C-A_mRNA(transcript)|go:"GO:0000002"(mitochondrial genome maintenance)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006264"(mitochondrial DNA replication)|go:"GO:0009295"(nucleoid)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0051096"(positive regulation of helicase activity)|go:"GO:0090297"(positive regulation of mitochondrial DNA replication)|interpro:IPR000424(Primosome PriB/single-strand DNA-binding)|interpro:IPR011344(Single-strand DNA-binding)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|rcsb pdb:6CQK|rcsb pdb:6CQM|rcsb pdb:6CQO|ensemblfungi:YCR028C-A(gene)|dip:DIP-7376N|mint:P32445 - - crc64:9F913C2FC9EF6E82 figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:I5YyvRta+mmFfo7ih+FBsRlvRx8559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P39923 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N - - crc64:58CA4983B0BAF7BA figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q08281 uniprotkb:P00950 intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C intact:EBI-13517|uniprotkb:Q02117|uniprotkb:D6VX45|ensemblfungi:YKL152C psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:pmg1_yeast(display_long)|uniprotkb:GPM1(gene name)|psi-mi:GPM1(display_short)|uniprotkb:GPM(gene name synonym)|uniprotkb:YKL152C(locus name)|uniprotkb:YKL607(orf name)|uniprotkb:Phosphoglyceromutase 1(gene name synonym)|uniprotkb:MPGM 1(gene name synonym)|uniprotkb:BPG-dependent PGAM 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9819987|imex:IM-23164-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) refseq:NP_012770.1|sgd:S000001635|go:"GO:0006096"(glycolytic process)|interpro:IPR001345(Phosphoglycerate/bisphosphoglycerate mutase)|interpro:IPR005952(Phosphoglycerate mutase 1)|interpro:IPR013078(Phosphoglycerate mutase)|interpro:IPR029033|rcsb pdb:1BQ3|rcsb pdb:1BQ4|rcsb pdb:1QHF|rcsb pdb:3PGM|rcsb pdb:4PGM|ensemblfungi:YKL152C(gene)|ensemblfungi:YKL152C_mRNA(transcript)|go:"GO:0004619"(phosphoglycerate mutase activity)|rcsb pdb:5PGM|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005829"(cytosol)|go:"GO:0006094"(gluconeogenesis)|mint:P00950|dip:DIP-6260N - - crc64:45E1A9CCDBDC104D figure legend:Figure 1A, Track 9, 2A, Fig. 4A, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 rogid:O4lo573Bz6RNmbbe4HdKcMKVaA0559292 intact-crc:B1D3C0400894F943|rigid:5kvhbCToBa5QEqt8a4qNywpj6OQ false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P53011 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820072|imex:IM-23164-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:D6A137FB0FDE2816 crc64:EAF75B9DE074106B figure legend:Figure 1 A, Track 11, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:110303F343A712E8|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P39923 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820072|imex:IM-23164-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N - crc64:D6A137FB0FDE2816 crc64:58CA4983B0BAF7BA figure legend:Figure 1 A, Track 11, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 intact-crc:110303F343A712E8|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P38164 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820072|imex:IM-23164-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 - crc64:D6A137FB0FDE2816 crc64:613630F9F41FF77C figure legend:Figure 1 A, Track 11, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 intact-crc:110303F343A712E8|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P47170 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820072|imex:IM-23164-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) - crc64:D6A137FB0FDE2816 crc64:BB8E73FF5B70CCDF figure legend:Figure 1 A, Track 11, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 intact-crc:110303F343A712E8|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:Q04491 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820072|imex:IM-23164-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:D6A137FB0FDE2816 crc64:A94388B4B9CB77FE figure legend:Figure 1 A, Track 11, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:110303F343A712E8|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P38742 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820072|imex:IM-23164-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - crc64:D6A137FB0FDE2816 crc64:8580F0C58982D51E figure legend:Figure 1 A, Track 11, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:110303F343A712E8|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:Q08281 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820072|imex:IM-23164-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) - crc64:D6A137FB0FDE2816 - figure legend:Figure 1 A, Track 11, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 intact-crc:110303F343A712E8|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:Q12499 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-12126|uniprotkb:D6W309|ensemblfungi:YOR310C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:nop58_yeast(display_long)|uniprotkb:Nucleolar protein 5(gene name synonym)|uniprotkb:NOP58(gene name)|psi-mi:NOP58(display_short)|uniprotkb:NOP5(gene name synonym)|uniprotkb:YOR310C(locus name)|uniprotkb:O6108(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 ensemblfungi:YOR310C(gene)|ensemblfungi:YOR310C_mRNA(transcript)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0017069"(snRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:1902570"(protein localization to nucleolus)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-4570464|reactome:R-SCE-6791226|rcsb pdb:6ZQC|refseq:NP_014955.1|sgd:S000005837|dip:DIP-5843N|mint:Q12499 - crc64:D6A137FB0FDE2816 crc64:8A2889448B2A19E2 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:Dtk1A6GOVO3KgTak8cTHjO+eDQ4559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P60010 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-2169|uniprotkb:P02579|uniprotkb:Q9P3X6|uniprotkb:Q9P3X7|uniprotkb:D6VTJ1|ensemblfungi:YFL039C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:act_yeast(display_long)|uniprotkb:ACT1(gene name)|psi-mi:ACT1(display_short)|uniprotkb:ABY1(gene name synonym)|uniprotkb:END7(gene name synonym)|uniprotkb:YFL039C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_116614.1|sgd:S000001855|dip:DIP-310N|mint:P60010|ensemblfungi:YFL039C(gene)|ensemblfungi:YFL039C_mRNA(transcript)|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000142"(cellular bud neck contractile ring)|go:"GO:0000812"(Swr1 complex)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005524"(ATP binding)|go:"GO:0005884"(actin filament)|go:"GO:0006281"(DNA repair)|go:"GO:0006897"(endocytosis)|go:"GO:0009306"(protein secretion)|go:"GO:0016573"(histone acetylation)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030476"(ascospore wall assembly)|go:"GO:0030479"(actin cortical patch)|go:"GO:0031011"(Ino80 complex)|go:"GO:0032432"(actin filament bundle)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:1902404"(mitotic actomyosin contractile ring contraction)|interpro:IPR004000(Actin/actin-like)|interpro:IPR004001(Actin, conserved site)|interpro:IPR020902|interpro:IPR043129|rcsb pdb:1YAG|rcsb pdb:1YVN|rcsb pdb:5NBL|rcsb pdb:5NBM|rcsb pdb:5NBN|rcsb pdb:5Y81|reactome:R-SCE-114608|reactome:R-SCE-190873|reactome:R-SCE-196025|reactome:R-SCE-2029482|reactome:R-SCE-5626467|reactome:R-SCE-5663213|reactome:R-SCE-8856828|reactome:R-SCE-8980692|reactome:R-SCE-9013026 - crc64:D6A137FB0FDE2816 crc64:87AC19B0B0BC9E71 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:yfgwiWq/Y0HviACqgjjUugpEKLw559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P0CS90 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-8637|uniprotkb:D6VWL6|uniprotkb:P12398|ensemblfungi:YJR045C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:hsp77_yeast(display_long)|uniprotkb:ENS1(gene name synonym)|uniprotkb:SSC1(gene name)|psi-mi:SSC1(display_short)|uniprotkb:YJR045C(locus name)|uniprotkb:J1639(orf name)|uniprotkb:mtHSP70(gene name synonym)|uniprotkb:Endonuclease SceI 75 kDa subunit(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 sgd:S000003806|refseq:NP_012579.1|interpro:IPR012725(Chaperone DnaK)|interpro:IPR013126(Heat shock protein 70)|interpro:IPR018181|interpro:IPR029047|interpro:IPR029048|mint:P0CS90|interpro:IPR043129|ensemblfungi:YJR045C(gene)|ensemblfungi:YJR045C_mRNA(transcript)|go:"GO:0001405"(PAM complex, Tim23 associated import motor)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0008566"(mitochondrial protein-transporting ATPase activity)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030150"(protein import into mitochondrial matrix)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0032079"(positive regulation of endodeoxyribonuclease activity)|go:"GO:0034620"(cellular response to unfolded protein)|go:"GO:0042026"(protein refolding)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051085"(chaperone cofactor-dependent protein refolding)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity) - crc64:D6A137FB0FDE2816 caution:This sequence has been withdrawn from Uniprot.|crc64:1E5672E76FCE24AC figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:jwa3ppE0voBqzfZAuY/E52tYrrw559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P07244 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-323|uniprotkb:D6VVA0|uniprotkb:E9P907|ensemblfungi:YGL234W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:pur2_yeast(display_long)|uniprotkb:ADE5,7(gene name)|psi-mi:ADE5,7(display_short)|uniprotkb:YGL234W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_011280.1|sgd:S000003203|dip:DIP-4080N|mint:P07244|ensemblfungi:YGL234W(gene)|ensemblfungi:YGL234W_mRNA(transcript)|go:"GO:0004637"(phosphoribosylamine-glycine ligase activity)|go:"GO:0004641"(phosphoribosylformylglycinamidine cyclo-ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006144"(purine nucleobase metabolic process)|go:"GO:0006164"(purine nucleotide biosynthetic process)|go:"GO:0006189"('de novo' IMP biosynthetic process)|go:"GO:0046084"(adenine biosynthetic process)|go:"GO:0046872"(metal ion binding)|interpro:IPR000115(Phosphoribosylglycinamide synthetase)|interpro:IPR004733(Phosphoribosylformylglycinamidine cyclo-ligase)|interpro:IPR010918(AIR synthase related protein, C-terminal)|interpro:IPR011054(Rudiment single hybrid motif)|interpro:IPR011761(ATP-grasp fold)|interpro:IPR013815(ATP-grasp fold, subdomain 1)|interpro:IPR016185(PreATP-grasp-like fold)|interpro:IPR016188(PurM, N-terminal-like)|interpro:IPR020559|interpro:IPR020560|interpro:IPR020561|interpro:IPR020562|interpro:IPR036676|interpro:IPR036921|interpro:IPR037123|reactome:R-SCE-73817 - crc64:D6A137FB0FDE2816 crc64:1583C6F3E64085D2 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:OurNVoji4AAfIj+hRnBxsqMdnIc559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P25694 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-4308|ensemblfungi:YDL126C|uniprotkb:D6VRM4 psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:cdc48_yeast(display_long)|uniprotkb:CDC48(gene name)|psi-mi:CDC48(display_short)|uniprotkb:Cell division cycle protein 48(gene name synonym)|uniprotkb:Transitional endoplasmic reticulum ATPase homolog(gene name synonym)|uniprotkb:YDL126C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_010157.1|sgd:S000002284|ensemblfungi:YDL126C(gene)|ensemblfungi:YDL126C_mRNA(transcript)|go:"GO:0000837"(Doa10p ubiquitin ligase complex)|dip:DIP-2704N|mint:P25694|go:"GO:0000839"(Hrd1p ubiquitin ligase ERAD-L complex)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006274"(DNA replication termination)|go:"GO:0010636"(positive regulation of mitochondrial fusion)|go:"GO:0016236"(macroautophagy)|go:"GO:0016320"(endoplasmic reticulum membrane fusion)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0019888"(protein phosphatase regulator activity)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030894"(replisome)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031134"(sister chromatid biorientation)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0034517"(ribophagy)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0036266"(Cdc48p-Npl4p-Vms1p AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0043328"(protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway)|go:"GO:0043332"(mating projection tip)|go:"GO:0043624"|go:"GO:0046034"(ATP metabolic process)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051974"(negative regulation of telomerase activity)|go:"GO:0070651"(nonfunctional rRNA decay)|go:"GO:0071629"(cytoplasm protein quality control by the ubiquitin-proteasome system)|go:"GO:0071630"(nuclear protein quality control by the ubiquitin-proteasome system)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0072671"(mitochondria-associated ubiquitin-dependent protein catabolic process)|go:"GO:0097352"(autophagosome maturation)|go:"GO:0120174"(stress-induced homeostatically regulated protein degradation pathway)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1900182"(positive regulation of protein localization to nucleus)|go:"GO:1990112"(RQC complex)|go:"GO:1990116"(ribosome-associated ubiquitin-dependent protein catabolic process)|go:"GO:1990171"(SCF complex disassembly in response to cadmium stress)|go:"GO:2001168"(positive regulation of histone H2B ubiquitination)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR015415(Vps4 oligomerisation, C-terminal)|interpro:IPR027417|interpro:IPR029067|interpro:IPR041569|rcsb pdb:6OA9|rcsb pdb:6OAA|rcsb pdb:6OAB|rcsb pdb:6OMB|rcsb pdb:6OPC|reactome:R-SCE-110320|reactome:R-SCE-3371511|reactome:R-SCE-532668|reactome:R-SCE-5358346|reactome:R-SCE-5689896|reactome:R-SCE-6798695|reactome:R-SCE-8876725 - crc64:D6A137FB0FDE2816 crc64:02ADDB9A227614D8 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:qM/04kWcyjkQ3QCa3WklyvhNigE559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P23641 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-11178|uniprotkb:D6VWP7|ensemblfungi:YJR077C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:mpcp_yeast(display_long)|uniprotkb:Phosphate transport protein(gene name synonym)|uniprotkb:J1837(orf name)|uniprotkb:YJR077C(locus name)|uniprotkb:MIR1(gene name)|psi-mi:MIR1(display_short)|uniprotkb:mPic 1(gene name synonym)|uniprotkb:Mitochondrial import receptor(gene name synonym)|uniprotkb:p32(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 ensemblfungi:YJR077C(gene)|ensemblfungi:YJR077C_mRNA(transcript)|go:"GO:0005315"(inorganic phosphate transmembrane transporter activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0031305"(integral component of mitochondrial inner membrane)|go:"GO:0035435"(phosphate ion transmembrane transport)|go:"GO:1990547"(mitochondrial phosphate ion transmembrane transport)|interpro:IPR002067(Mitochondrial carrier protein)|interpro:IPR018108|interpro:IPR023395|interpro:IPR044677|refseq:NP_012611.1|sgd:S000003838|dip:DIP-1714N - crc64:D6A137FB0FDE2816 crc64:89D1D97C49A9E8F1 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:kHmfGupxVg2OGqtJ1oIwqPCeY3Q559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P22137 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-4766|uniprotkb:D6VTU9|ensemblfungi:YGL206C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:clh_yeast(display_long)|uniprotkb:CHC1(gene name)|psi-mi:CHC1(display_short)|uniprotkb:YGL206C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_011309.1|sgd:S000003174|dip:DIP-2279N|mint:P22137|ensemblfungi:YGL206C(gene)|ensemblfungi:YGL206C_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006895"(Golgi to endosome transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006898"(receptor-mediated endocytosis)|go:"GO:0030125"(clathrin vesicle coat)|go:"GO:0030130"(clathrin coat of trans-Golgi network vesicle)|go:"GO:0030132"(clathrin coat of coated pit)|go:"GO:0030479"(actin cortical patch)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0032051"(clathrin light chain binding)|go:"GO:0071439"(clathrin complex)|interpro:IPR000547(Clathrin, heavy chain/VPS, 7-fold repeat)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR015348(Clathrin, heavy chain, linker, core motif)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016025(Clathrin, heavy chain, linker and propeller)|interpro:IPR016341(Clathrin, heavy chain)|interpro:IPR022365|reactome:R-SCE-190873|reactome:R-SCE-196025|reactome:R-SCE-432720|reactome:R-SCE-437239|reactome:R-SCE-8856828|reactome:R-SCE-8866427|reactome:R-SCE-8964038 - crc64:D6A137FB0FDE2816 crc64:622F3083DF2FE315 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:SAN6H3nVFozXZyTiRLaljMcIKIA559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P16861 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-9428|ensemblfungi:YGR240C|uniprotkb:D6VV20 psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:pfka1_yeast(display_long)|uniprotkb:PFK1(gene name)|psi-mi:PFK1(display_short)|uniprotkb:YGR240C(locus name)|uniprotkb:G8599(orf name)|uniprotkb:Phosphohexokinase(gene name synonym)|uniprotkb:ATP-dependent 6-phosphofructokinase(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_011756.1|sgd:S000003472|ensemblfungi:YGR240C(gene)|ensemblfungi:YGR240C_mRNA(transcript)|go:"GO:0003872"(6-phosphofructokinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005945"(6-phosphofructokinase complex)|go:"GO:0006002"(fructose 6-phosphate metabolic process)|go:"GO:0006096"(glycolytic process)|go:"GO:0016208"(AMP binding)|go:"GO:0030388"(fructose 1,6-bisphosphate metabolic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0048029"(monosaccharide binding)|go:"GO:0051453"(regulation of intracellular pH)|go:"GO:0061621"(canonical glycolysis)|go:"GO:0070095"(fructose-6-phosphate binding)|go:"GO:1902600"(proton transmembrane transport)|interpro:IPR000023(Phosphofructokinase)|interpro:IPR009161(6-phosphofructokinase, eukaryotic type)|interpro:IPR015912(Phosphofructokinase, conserved site)|interpro:IPR022953|interpro:IPR035966|interpro:IPR040712|rcsb pdb:3O8O|reactome:R-SCE-6798695|reactome:R-SCE-70171|mint:P16861|dip:DIP-1505N - crc64:D6A137FB0FDE2816 crc64:995B3DF7C7781B29 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:mqqXE8Cvcp019pDQsU01zBYUsCc559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P41810 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-4869|uniprotkb:Q03779|uniprotkb:D6VSL9|ensemblfungi:YDR238C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:copb_yeast(display_long)|uniprotkb:SEC26(gene name)|psi-mi:SEC26(display_short)|uniprotkb:YDR238C(locus name)|uniprotkb:YD8419.05C(orf name)|uniprotkb:Beta-coat protein(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 sgd:S000002646|refseq:NP_010524.3|dip:DIP-6467N|mint:P41810|ensemblfungi:YDR238C(gene)|ensemblfungi:YDR238C_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005198"(structural molecule activity)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0030126"(COPI vesicle coat)|interpro:IPR000225(Armadillo)|interpro:IPR002553(Clathrin/coatomer adaptor, adaptin-like, N-terminal)|interpro:IPR011710(Coatomer, beta subunit, C-terminal)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016460(Coatomer, beta subunit)|interpro:IPR029446|reactome:R-SCE-6798695|reactome:R-SCE-6807878|reactome:R-SCE-6811434 - crc64:D6A137FB0FDE2816 crc64:885420DB026BCFA3 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:ZfLp1BUmvVuTiXn7/Zbf/3m6VtE559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P54115 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-5798|uniprotkb:Q02782|uniprotkb:D6W3V3|ensemblfungi:YPL061W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:aldh6_yeast(display_long)|uniprotkb:ALD6(gene name)|psi-mi:ALD6(display_short)|uniprotkb:ALDH1(gene name synonym)|uniprotkb:YPL061W(locus name)|uniprotkb:LPE9(orf name)|uniprotkb:"Mg(2+)-activated acetaldehyde dehydrogenase"(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_015264.1|sgd:S000005982|dip:DIP-8324N|mint:P54115|ensemblfungi:YPL061W(gene)|ensemblfungi:YPL061W_mRNA(transcript)|go:"GO:0004029"("aldehyde dehydrogenase (NAD+) activity")|go:"GO:0004030"("aldehyde dehydrogenase [NAD(P)+] activity")|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006068"(ethanol catabolic process)|go:"GO:0006740"(NADPH regeneration)|go:"GO:0009651"(response to salt stress)|go:"GO:0019413"(acetate biosynthetic process)|go:"GO:0033721"("aldehyde dehydrogenase (NADP+) activity")|interpro:IPR015590(Aldehyde dehydrogenase)|interpro:IPR016161(Aldehyde/histidinol dehydrogenase)|interpro:IPR016162(Aldehyde dehydrogenase, N-terminal)|interpro:IPR016163(Aldehyde dehydrogenase, C-terminal)|interpro:IPR029510|reactome:R-SCE-196757|reactome:R-SCE-71384 - crc64:D6A137FB0FDE2816 crc64:542AA956EFA0E676 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:OjzBt0drkccBr2yum1dWtaUkpIg559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P40850 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-10983|uniprotkb:Q45T81|uniprotkb:Q8TF89|ensemblfungi:YNL085W|uniprotkb:D6W194 psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:mkt1_yeast(display_long)|uniprotkb:MKT1(gene name)|psi-mi:MKT1(display_short)|uniprotkb:Inactive endonuclease MKT1(gene name synonym)|uniprotkb:N2302(orf name)|uniprotkb:YNL085W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 go:"GO:0005829"(cytosol)|go:"GO:0005844"(polysome)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0017108"(5'-flap endonuclease activity)|go:"GO:0034399"(nuclear periphery)|go:"GO:0045727"(positive regulation of translation)|interpro:IPR006084("DNA repair protein (XPGC)/yeast Rad")|interpro:IPR006085(XPG N-terminal)|interpro:IPR006086(XPG I)|interpro:IPR022039|interpro:IPR022040|interpro:IPR029060|interpro:IPR037314|go:"GO:0005737"(cytoplasm)|ensemblfungi:YNL085W(gene)|ensemblfungi:YNL085W_mRNA(transcript)|go:"GO:0000932"(P-body)|go:"GO:0004520"(endodeoxyribonuclease activity)|refseq:NP_014314.3|sgd:S000005029|mint:P40850|dip:DIP-6530N - crc64:D6A137FB0FDE2816 crc64:BD976D8387E4F708 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:x2ROBTnVusxgwUjUOTID6qyedzo559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P00830 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-3242|uniprotkb:D6VWU0|ensemblfungi:YJR121W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:atpb_yeast(display_long)|uniprotkb:ATP2(gene name)|psi-mi:ATP2(display_short)|uniprotkb:J2041(orf name)|uniprotkb:YJR121W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 sgd:S000003882|refseq:NP_012655.3|dip:DIP-3028N|mint:P00830|ensemblfungi:YJR121W(gene)|ensemblfungi:YJR121W_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005753"(mitochondrial proton-transporting ATP synthase complex)|go:"GO:0005754"(mitochondrial proton-transporting ATP synthase, catalytic core)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005829"(cytosol)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0042776"(mitochondrial ATP synthesis coupled proton transport)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005722(ATPase, F1 complex, beta subunit)|interpro:IPR020003|interpro:IPR024034|interpro:IPR027417|interpro:IPR036121|rcsb pdb:2HLD|rcsb pdb:2WPD|rcsb pdb:2XOK|rcsb pdb:3FKS|rcsb pdb:3OE7|rcsb pdb:3OEE|rcsb pdb:3OEH|rcsb pdb:3OFN|rcsb pdb:3ZIA|rcsb pdb:3ZRY|rcsb pdb:4B2Q|rcsb pdb:6B8H|rcsb pdb:6CP3|rcsb pdb:6CP6|reactome:R-SCE-163210|reactome:R-SCE-8949613 - crc64:D6A137FB0FDE2816 crc64:EDFF256826F68F0C figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:XA14lgBJ4D0nrBpMQw5tsc4aByU559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P53011 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:D6A137FB0FDE2816 crc64:EAF75B9DE074106B figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P17255 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-20245|uniprotkb:O74301|uniprotkb:Q9Y7W5|uniprotkb:D6VRG7|ensemblfungi:YDL185W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:vata_yeast(display_long)|uniprotkb:VMA1(gene name)|psi-mi:VMA1(display_short)|uniprotkb:CLS8(gene name synonym)|uniprotkb:TFP1(gene name synonym)|uniprotkb:YDL185W(locus name)|uniprotkb:D1286(orf name)|uniprotkb:Vacuolar proton pump subunit A(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_010096.1|sgd:S000002344|mint:P17255|ensemblfungi:YDL185W(gene)|ensemblfungi:YDL185W_mRNA(transcript)|go:"GO:0000221"(vacuolar proton-transporting V-type ATPase, V1 domain)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005524"(ATP binding)|go:"GO:0006314"(intron homing)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0012505"(endomembrane system)|go:"GO:0016539"(intein-mediated protein splicing)|go:"GO:0044267"(cellular protein metabolic process)|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|go:"GO:1902600"(proton transmembrane transport)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR003586(Hedgehog/intein hint domain, C-terminal)|interpro:IPR003587(Hedgehog/intein hint, N-terminal)|interpro:IPR004042(Intein DOD homing endonuclease)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR006141(Intein splicing site)|interpro:IPR006142(Intein)|interpro:IPR007868(Hom-end-associated Hint)|interpro:IPR007869(Homing endonuclease)|interpro:IPR020003|interpro:IPR022878|interpro:IPR023366|interpro:IPR027417|interpro:IPR027434|interpro:IPR030934|interpro:IPR031686|interpro:IPR036121|interpro:IPR036844|rcsb pdb:1DFA|rcsb pdb:1EF0|rcsb pdb:1GPP|rcsb pdb:1JVA|rcsb pdb:1LWS|rcsb pdb:1LWT|rcsb pdb:1UM2|rcsb pdb:1VDE|rcsb pdb:3J9T|rcsb pdb:3J9U|rcsb pdb:3J9V|rcsb pdb:5BW9|rcsb pdb:5D80|rcsb pdb:5VOX|rcsb pdb:5VOY|rcsb pdb:5VOZ|reactome:R-SCE-1222556|reactome:R-SCE-77387|reactome:R-SCE-917977|reactome:R-SCE-9639288|interpro:IPR024034|dip:DIP-2293N - crc64:D6A137FB0FDE2816 crc64:2A4C65D2F59426FD figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:YdmGZxIMX2IXMHC4EO85uOAf1Hg559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P53252 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-23225|uniprotkb:D6VUL8|ensemblfungi:YGR086C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:pil1_yeast(display_long)|uniprotkb:YGR086C(locus name)|uniprotkb:PIL1(gene name)|psi-mi:PIL1(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 sgd:S000003318|refseq:NP_011600.3|dip:DIP-4618N|mint:P53252|ensemblfungi:YGR086C(gene)|ensemblfungi:YGR086C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005811"(lipid droplet)|go:"GO:0005886"(plasma membrane)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0006897"(endocytosis)|go:"GO:0008104"(protein localization)|go:"GO:0008289"(lipid binding)|go:"GO:0009408"(response to heat)|go:"GO:0032126"(eisosome)|go:"GO:0036286"(eisosome filament)|go:"GO:0070941"(eisosome assembly)|go:"GO:0071944"(cell periphery)|go:"GO:0097446"(protein localization to eisosome filament)|interpro:IPR027267|interpro:IPR028245 - crc64:D6A137FB0FDE2816 crc64:C86AE5ABB508EA03 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:OtBCHiFwxzPwPX5y1oMTFqlc1Po559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P38164 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 - crc64:D6A137FB0FDE2816 crc64:613630F9F41FF77C figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P07259 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-14372|uniprotkb:A2TBN0|uniprotkb:Q06HN1|uniprotkb:D6VW55|ensemblfungi:YJL130C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:pyr1_yeast(display_long)|uniprotkb:J0686(orf name)|uniprotkb:YJL130C(locus name)|uniprotkb:URA2(gene name)|psi-mi:URA2(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_012405.2|sgd:S000003666|go:"GO:0004070"(aspartate carbamoyltransferase activity)|go:"GO:0004088"("carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity")|go:"GO:0004151"(dihydroorotase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006207"('de novo' pyrimidine nucleobase biosynthetic process)|go:"GO:0006228"(UTP biosynthetic process)|go:"GO:0006541"(glutamine metabolic process)|go:"GO:0006807"(nitrogen compound metabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016597"(amino acid binding)|go:"GO:0019240"(citrulline biosynthetic process)|go:"GO:0044205"('de novo' UMP biosynthetic process)|go:"GO:0045984"(negative regulation of pyrimidine nucleobase metabolic process)|go:"GO:0046872"(metal ion binding)|interpro:IPR002082(Aspartate carbamoyltransferase, eukaryotic)|interpro:IPR002474(Carbamoyl phosphate synthase, small subunit, N-terminal)|interpro:IPR005479(Carbamoyl phosphate synthetase, large subunit, ATP-binding)|interpro:IPR005480(Carbamoyl phosphate synthetase, large subunit, oligomerisation)|interpro:IPR005483(Carbamoyl phosphate synthase, large subunit)|interpro:IPR006130(Aspartate/ornithine carbamoyltransferase)|ensemblfungi:YJL130C(gene)|ensemblfungi:YJL130C_mRNA(transcript)|interpro:IPR006131(Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region)|interpro:IPR006132(Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding)|interpro:IPR006274(Carbamoyl phosphate synthase, small subunit)|interpro:IPR006275(Carbamoyl phosphate synthase, large subunit, glutamine-dependent)|interpro:IPR011607(MGS-like)|interpro:IPR011761(ATP-grasp fold)|interpro:IPR013815(ATP-grasp fold, subdomain 1)|interpro:IPR016185(PreATP-grasp-like fold)|interpro:IPR017926|interpro:IPR029062|interpro:IPR032466|interpro:IPR035686|interpro:IPR036480|interpro:IPR036901|interpro:IPR036914|interpro:IPR036897|reactome:R-SCE-500753|mint:P07259|dip:DIP-7215N - crc64:D6A137FB0FDE2816 crc64:D5A47F4E42A9B1A7 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:gc7xepqIGcYGssYFCLBvLnTogPE559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P16862 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-9435|ensemblfungi:YMR205C|uniprotkb:D6W030 psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:pfka2_yeast(display_long)|uniprotkb:PFK2(gene name)|psi-mi:PFK2(display_short)|uniprotkb:YMR205C(locus name)|uniprotkb:YM8325.06C(orf name)|uniprotkb:Phosphohexokinase(gene name synonym)|uniprotkb:ATP-dependent 6-phosphofructokinase(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 ensemblfungi:YMR205C(gene)|ensemblfungi:YMR205C_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0003872"(6-phosphofructokinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005945"(6-phosphofructokinase complex)|go:"GO:0006002"(fructose 6-phosphate metabolic process)|go:"GO:0006096"(glycolytic process)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0016208"(AMP binding)|go:"GO:0030388"(fructose 1,6-bisphosphate metabolic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0048029"(monosaccharide binding)|go:"GO:0051453"(regulation of intracellular pH)|go:"GO:0061621"(canonical glycolysis)|go:"GO:0070072"(vacuolar proton-transporting V-type ATPase complex assembly)|go:"GO:0070095"(fructose-6-phosphate binding)|go:"GO:1902600"(proton transmembrane transport)|interpro:IPR000023(Phosphofructokinase)|interpro:IPR009161(6-phosphofructokinase, eukaryotic type)|interpro:IPR015912(Phosphofructokinase, conserved site)|interpro:IPR022953|interpro:IPR029068|interpro:IPR035966|rcsb pdb:3O8O|reactome:R-SCE-6798695|reactome:R-SCE-70171|refseq:NP_013932.1|sgd:S000004818|mint:P16862|dip:DIP-2619N - crc64:D6A137FB0FDE2816 crc64:82CE6402CEDBBCB2 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:PurR+sy8cBMAoGxl0dMMcxuz8wI559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:Q04491 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:D6A137FB0FDE2816 crc64:A94388B4B9CB77FE figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P07251 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-3234|uniprotkb:Q92449|ensemblfungi:YBL099W|uniprotkb:D6VPQ6 psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:atpa_yeast(display_long)|uniprotkb:ATP1(gene name)|psi-mi:ATP1(display_short)|uniprotkb:YBL0827(orf name)|uniprotkb:YBL099W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 ensemblfungi:YBL099W(gene)|ensemblfungi:YBL099W_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005754"(mitochondrial proton-transporting ATP synthase, catalytic core)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005829"(cytosol)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|interpro:IPR023366|interpro:IPR027417|interpro:IPR033732|interpro:IPR036121|refseq:NP_009453.2|sgd:S000000195|dip:DIP-3025N|mint:P07251|interpro:IPR038376|rcsb pdb:2HLD|rcsb pdb:2WPD|rcsb pdb:2XOK|rcsb pdb:3FKS|rcsb pdb:3OE7|rcsb pdb:3OEE|rcsb pdb:3OEH|rcsb pdb:3OFN|rcsb pdb:3ZIA|rcsb pdb:3ZRY|rcsb pdb:4B2Q|rcsb pdb:6B8H|rcsb pdb:6CP3|rcsb pdb:6CP6|reactome:R-SCE-163210|reactome:R-SCE-8949613 - crc64:D6A137FB0FDE2816 crc64:E8041D289B924696 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:yqbEHfcYrXujvE9wfeN4KyeOHD8559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P16140 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-20254|uniprotkb:P32123|uniprotkb:D6VQC4|ensemblfungi:YBR127C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:vatb_yeast(display_long)|uniprotkb:VMA2(gene name)|psi-mi:VMA2(display_short)|uniprotkb:Vacuolar proton pump subunit B(gene name synonym)|uniprotkb:V-ATPase 57 kDa subunit(gene name synonym)|uniprotkb:VAT2(gene name synonym)|uniprotkb:YBR1002(orf name)|uniprotkb:YBR127C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 sgd:S000000331|refseq:NP_009685.3|ensemblfungi:YBR127C(gene)|ensemblfungi:YBR127C_mRNA(transcript)|go:"GO:0000221"(vacuolar proton-transporting V-type ATPase, V1 domain)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000425"(pexophagy)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006874"(cellular calcium ion homeostasis)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0016787"(hydrolase activity)|go:"GO:0046034"(ATP metabolic process)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|go:"GO:0055085"(transmembrane transport)|go:"GO:1902906"(proteasome storage granule assembly)|go:"GO:1990816"(vacuole-mitochondrion membrane contact site)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005723(ATPase, V1 complex, subunit B)|interpro:IPR020003|interpro:IPR022879|interpro:IPR027417|rcsb pdb:3J9T|rcsb pdb:3J9U|rcsb pdb:3J9V|rcsb pdb:5BW9|rcsb pdb:5D80|rcsb pdb:5VOX|rcsb pdb:5VOY|rcsb pdb:5VOZ|rcsb pdb:6O7V|rcsb pdb:6O7W|rcsb pdb:6O7X|reactome:R-SCE-1222556|reactome:R-SCE-77387|reactome:R-SCE-917977|reactome:R-SCE-9639288|dip:DIP-2292N|mint:P16140 - crc64:D6A137FB0FDE2816 crc64:02A7DEC571EFF7C2 figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:plrXuzL+4el/8brAJsClEbg+p0E559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P00950 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-13517|uniprotkb:Q02117|uniprotkb:D6VX45|ensemblfungi:YKL152C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:pmg1_yeast(display_long)|uniprotkb:GPM1(gene name)|psi-mi:GPM1(display_short)|uniprotkb:GPM(gene name synonym)|uniprotkb:YKL152C(locus name)|uniprotkb:YKL607(orf name)|uniprotkb:Phosphoglyceromutase 1(gene name synonym)|uniprotkb:MPGM 1(gene name synonym)|uniprotkb:BPG-dependent PGAM 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_012770.1|sgd:S000001635|go:"GO:0006096"(glycolytic process)|interpro:IPR001345(Phosphoglycerate/bisphosphoglycerate mutase)|interpro:IPR005952(Phosphoglycerate mutase 1)|interpro:IPR013078(Phosphoglycerate mutase)|interpro:IPR029033|rcsb pdb:1BQ3|rcsb pdb:1BQ4|rcsb pdb:1QHF|rcsb pdb:3PGM|rcsb pdb:4PGM|ensemblfungi:YKL152C(gene)|ensemblfungi:YKL152C_mRNA(transcript)|go:"GO:0004619"(phosphoglycerate mutase activity)|rcsb pdb:5PGM|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005829"(cytosol)|go:"GO:0006094"(gluconeogenesis)|mint:P00950|dip:DIP-6260N - crc64:D6A137FB0FDE2816 crc64:45E1A9CCDBDC104D figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:O4lo573Bz6RNmbbe4HdKcMKVaA0559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P19882 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-8586|uniprotkb:D6VYQ6|ensemblfungi:YLR259C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:hsp60_yeast(display_long)|uniprotkb:HSP60(gene name)|psi-mi:HSP60(display_short)|uniprotkb:MIF4(gene name synonym)|uniprotkb:YLR259C(locus name)|uniprotkb:L8479.10(orf name)|uniprotkb:Stimulator factor I 66 kDa component(gene name synonym)|uniprotkb:P66(gene name synonym)|uniprotkb:CPN60(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820122|imex:IM-23164-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_013360.1|sgd:S000004249|mint:P19882|dip:DIP-7648N|ensemblfungi:YLR259C(gene)|ensemblfungi:YLR259C_mRNA(transcript)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005829"(cytosol)|go:"GO:0006457"(protein folding)|go:"GO:0006458"('de novo' protein folding)|go:"GO:0008637"(apoptotic mitochondrial changes)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0034514"(mitochondrial unfolded protein response)|go:"GO:0042026"(protein refolding)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0045041"(protein import into mitochondrial intermembrane space)|go:"GO:0050821"(protein stabilization)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051087"(chaperone binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051604"(protein maturation)|interpro:IPR001844(Chaperonin Cpn60)|interpro:IPR002423(Chaperonin Cpn60/TCP-1)|interpro:IPR018370|interpro:IPR027409|interpro:IPR027410|interpro:IPR027413|reactome:R-SCE-1268020 - crc64:D6A137FB0FDE2816 crc64:279DC3AF5A2B0A3E figure legend:Figure 1 A, track 12, Supp. Table 3, Supp. Fig. 2 track 5|comment:Interaction observed in RTC1-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:DoMJw4ScT3htVDJn+ZJD5fIlSOA559292 intact-crc:1FCB0D7FA7B4762D|rigid:8edJ+OV980SKCZjVWWk7Y5G2b14 false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:Q04491 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820167|imex:IM-23164-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:D6A137FB0FDE2816 crc64:A94388B4B9CB77FE comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 13, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/10 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:DF6976D20B759E59|rigid:STPhvB6s426mE2QwO9cI5anXPPE false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:Q08281 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820167|imex:IM-23164-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) - crc64:D6A137FB0FDE2816 - comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 13, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/10 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 intact-crc:DF6976D20B759E59|rigid:STPhvB6s426mE2QwO9cI5anXPPE false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P38164 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820167|imex:IM-23164-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 - crc64:D6A137FB0FDE2816 crc64:613630F9F41FF77C comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 13, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/10 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 intact-crc:DF6976D20B759E59|rigid:STPhvB6s426mE2QwO9cI5anXPPE false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P53011 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820167|imex:IM-23164-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:D6A137FB0FDE2816 crc64:EAF75B9DE074106B comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 13, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/10 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:DF6976D20B759E59|rigid:STPhvB6s426mE2QwO9cI5anXPPE false - - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P47170 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820177|imex:IM-23164-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) - crc64:D6A137FB0FDE2816 crc64:BB8E73FF5B70CCDF figure legend:Figure 1 A, Track 14, Supp. Table 3|comment:Elution buffer - 20mM Hepes, pH 7.4, 110 mM KOAc, 2mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 1 M NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 1 M NaCl|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 intact-crc:2510F7F7A2AFE9B4|rigid:e+sfxGrlF+LQQ+Co2EyeBB7hXxo false protein a tag:?-?|sufficient binding region:1-400 - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P38742 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820177|imex:IM-23164-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - crc64:D6A137FB0FDE2816 crc64:8580F0C58982D51E figure legend:Figure 1 A, Track 14, Supp. Table 3|comment:Elution buffer - 20mM Hepes, pH 7.4, 110 mM KOAc, 2mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 1 M NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 1 M NaCl|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:2510F7F7A2AFE9B4|rigid:e+sfxGrlF+LQQ+Co2EyeBB7hXxo false protein a tag:?-?|sufficient binding region:1-400 - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P39923 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820177|imex:IM-23164-10 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N - crc64:D6A137FB0FDE2816 crc64:58CA4983B0BAF7BA figure legend:Figure 1 A, Track 14, Supp. Table 3|comment:Elution buffer - 20mM Hepes, pH 7.4, 110 mM KOAc, 2mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 1 M NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 1 M NaCl|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 intact-crc:2510F7F7A2AFE9B4|rigid:e+sfxGrlF+LQQ+Co2EyeBB7hXxo false protein a tag:?-?|sufficient binding region:1-400 - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:Q04491 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820307|imex:IM-23164-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:D6A137FB0FDE2816 crc64:A94388B4B9CB77FE figure legend:Figure 1 A, Track 16, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:CC038983C9F93681|rigid:LHc67Yfjnvp9ItlUiierCj0o2HA false sufficient binding region:1-909|protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P38742 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820307|imex:IM-23164-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - crc64:D6A137FB0FDE2816 crc64:8580F0C58982D51E figure legend:Figure 1 A, Track 16, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:CC038983C9F93681|rigid:LHc67Yfjnvp9ItlUiierCj0o2HA false sufficient binding region:1-909|protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P39923 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820307|imex:IM-23164-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N - crc64:D6A137FB0FDE2816 crc64:58CA4983B0BAF7BA figure legend:Figure 1 A, Track 16, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 intact-crc:CC038983C9F93681|rigid:LHc67Yfjnvp9ItlUiierCj0o2HA false sufficient binding region:1-909|protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P47170 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820307|imex:IM-23164-12 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) - crc64:D6A137FB0FDE2816 crc64:BB8E73FF5B70CCDF figure legend:Figure 1 A, Track 16, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 intact-crc:CC038983C9F93681|rigid:LHc67Yfjnvp9ItlUiierCj0o2HA false sufficient binding region:1-909|protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P47170 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820295|imex:IM-23164-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) - crc64:D6A137FB0FDE2816 crc64:BB8E73FF5B70CCDF figure legend:Figure 1 A, Track 15, Supp. Table 3|comment:Elution buffer - 20mM Hepes, pH 7.4, 110 mM KOAc, 2mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 M NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 M NaCl|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 intact-crc:2507B4EE5523487F|rigid:EC195ySqPN1z7yoLSfBrdkty/c0 false sufficient binding region:1-400|protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:Q03897 uniprotkb:P38742 intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820295|imex:IM-23164-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - crc64:D6A137FB0FDE2816 crc64:8580F0C58982D51E figure legend:Figure 1 A, Track 15, Supp. Table 3|comment:Elution buffer - 20mM Hepes, pH 7.4, 110 mM KOAc, 2mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 M NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 M NaCl|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:2507B4EE5523487F|rigid:EC195ySqPN1z7yoLSfBrdkty/c0 false sufficient binding region:1-400|protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:Q03897 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820321|imex:IM-23164-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 - crc64:613630F9F41FF77C crc64:D6A137FB0FDE2816 figure legend:Figure 1 A, Track 17, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 intact-crc:B66604793638AB1D|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P53011 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820321|imex:IM-23164-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:613630F9F41FF77C crc64:EAF75B9DE074106B figure legend:Figure 1 A, Track 17, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:B66604793638AB1D|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P39923 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820321|imex:IM-23164-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N - crc64:613630F9F41FF77C crc64:58CA4983B0BAF7BA figure legend:Figure 1 A, Track 17, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 intact-crc:B66604793638AB1D|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P47170 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820321|imex:IM-23164-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) - crc64:613630F9F41FF77C crc64:BB8E73FF5B70CCDF figure legend:Figure 1 A, Track 17, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 intact-crc:B66604793638AB1D|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:Q04491 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820321|imex:IM-23164-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:613630F9F41FF77C crc64:A94388B4B9CB77FE figure legend:Figure 1 A, Track 17, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:B66604793638AB1D|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P38742 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820321|imex:IM-23164-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - crc64:613630F9F41FF77C crc64:8580F0C58982D51E figure legend:Figure 1 A, Track 17, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:B66604793638AB1D|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:Q08281 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820321|imex:IM-23164-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) - crc64:613630F9F41FF77C - figure legend:Figure 1 A, Track 17, Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 intact-crc:B66604793638AB1D|rigid:cI+YozB6C2l38YNBEr73h47PArA false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P16140 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-20254|uniprotkb:P32123|uniprotkb:D6VQC4|ensemblfungi:YBR127C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:vatb_yeast(display_long)|uniprotkb:VMA2(gene name)|psi-mi:VMA2(display_short)|uniprotkb:Vacuolar proton pump subunit B(gene name synonym)|uniprotkb:V-ATPase 57 kDa subunit(gene name synonym)|uniprotkb:VAT2(gene name synonym)|uniprotkb:YBR1002(orf name)|uniprotkb:YBR127C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 sgd:S000000331|refseq:NP_009685.3|ensemblfungi:YBR127C(gene)|ensemblfungi:YBR127C_mRNA(transcript)|go:"GO:0000221"(vacuolar proton-transporting V-type ATPase, V1 domain)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000425"(pexophagy)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006874"(cellular calcium ion homeostasis)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0016787"(hydrolase activity)|go:"GO:0046034"(ATP metabolic process)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|go:"GO:0055085"(transmembrane transport)|go:"GO:1902906"(proteasome storage granule assembly)|go:"GO:1990816"(vacuole-mitochondrion membrane contact site)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005723(ATPase, V1 complex, subunit B)|interpro:IPR020003|interpro:IPR022879|interpro:IPR027417|rcsb pdb:3J9T|rcsb pdb:3J9U|rcsb pdb:3J9V|rcsb pdb:5BW9|rcsb pdb:5D80|rcsb pdb:5VOX|rcsb pdb:5VOY|rcsb pdb:5VOZ|rcsb pdb:6O7V|rcsb pdb:6O7W|rcsb pdb:6O7X|reactome:R-SCE-1222556|reactome:R-SCE-77387|reactome:R-SCE-917977|reactome:R-SCE-9639288|dip:DIP-2292N|mint:P16140 - crc64:613630F9F41FF77C crc64:02A7DEC571EFF7C2 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:plrXuzL+4el/8brAJsClEbg+p0E559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P22137 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-4766|uniprotkb:D6VTU9|ensemblfungi:YGL206C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:clh_yeast(display_long)|uniprotkb:CHC1(gene name)|psi-mi:CHC1(display_short)|uniprotkb:YGL206C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011309.1|sgd:S000003174|dip:DIP-2279N|mint:P22137|ensemblfungi:YGL206C(gene)|ensemblfungi:YGL206C_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006895"(Golgi to endosome transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006898"(receptor-mediated endocytosis)|go:"GO:0030125"(clathrin vesicle coat)|go:"GO:0030130"(clathrin coat of trans-Golgi network vesicle)|go:"GO:0030132"(clathrin coat of coated pit)|go:"GO:0030479"(actin cortical patch)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0032051"(clathrin light chain binding)|go:"GO:0071439"(clathrin complex)|interpro:IPR000547(Clathrin, heavy chain/VPS, 7-fold repeat)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR015348(Clathrin, heavy chain, linker, core motif)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016025(Clathrin, heavy chain, linker and propeller)|interpro:IPR016341(Clathrin, heavy chain)|interpro:IPR022365|reactome:R-SCE-190873|reactome:R-SCE-196025|reactome:R-SCE-432720|reactome:R-SCE-437239|reactome:R-SCE-8856828|reactome:R-SCE-8866427|reactome:R-SCE-8964038 - crc64:613630F9F41FF77C crc64:622F3083DF2FE315 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:SAN6H3nVFozXZyTiRLaljMcIKIA559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P41318 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-28598|uniprotkb:D6W1H1|ensemblfungi:YNL006W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:lst8_yeast(display_long)|uniprotkb:Lethal with SEC13 protein 8(gene name synonym)|uniprotkb:YNL006W(locus name)|uniprotkb:N2005(orf name)|uniprotkb:LST8(gene name)|psi-mi:LST8(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 reactome:R-SCE-3371571|sgd:S000004951|refseq:NP_014392.3|dip:DIP-5318N|reactome:R-SCE-1257604|reactome:R-SCE-389357|reactome:R-SCE-5218920|reactome:R-SCE-6804757|reactome:R-SCE-9639288|ensemblfungi:YNL006W(gene)|ensemblfungi:YNL006W_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005829"(cytosol)|go:"GO:0007165"(signal transduction)|go:"GO:0010008"(endosome membrane)|go:"GO:0030295"(protein kinase activator activity)|go:"GO:0030950"(establishment or maintenance of actin cytoskeleton polarity)|go:"GO:0031234"(extrinsic component of cytoplasmic side of plasma membrane)|go:"GO:0031505"(fungal-type cell wall organization)|go:"GO:0031929"(TOR signaling)|go:"GO:0031930"(mitochondria-nucleus signaling pathway)|go:"GO:0031931"(TORC1 complex)|go:"GO:0031932"(TORC2 complex)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0034399"(nuclear periphery)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|interpro:IPR037588|rcsb pdb:6EMK - crc64:613630F9F41FF77C crc64:536AA1DB8E8151F0 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:DJkTl61Tdn8EtP/6tE7UFerq8w0559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P19097 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-6806|uniprotkb:Q12533|uniprotkb:D6W3D9|ensemblfungi:YPL231W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:fas2_yeast(display_long)|uniprotkb:P1409(orf name)|uniprotkb:YPL231W(locus name)|uniprotkb:FAS2(gene name)|psi-mi:FAS2(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_015093.1|sgd:S000006152|mint:P19097|dip:DIP-960N|interpro:IPR040899|interpro:IPR041550|rcsb pdb:2ML8|rcsb pdb:2PFF|rcsb pdb:2UV8|rcsb pdb:2VKZ|rcsb pdb:2WAS|rcsb pdb:2WAT|rcsb pdb:3HMJ|rcsb pdb:6JSH|rcsb pdb:6JSI|rcsb pdb:6QL5|rcsb pdb:6QL6|rcsb pdb:6QL7|rcsb pdb:6QL9|rcsb pdb:6TA1|rcsb pdb:6WC7|ensemblfungi:YPL231W(gene)|ensemblfungi:YPL231W_mRNA(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004315"(3-oxoacyl-[acyl-carrier-protein] synthase activity)|go:"GO:0004316"("3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity")|go:"GO:0004321"(fatty-acyl-CoA synthase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005835"(fatty acid synthase complex)|go:"GO:0008897"(holo-[acyl-carrier-protein] synthase activity)|go:"GO:0042759"(long-chain fatty acid biosynthetic process)|go:"GO:0102131"(obsolete 3-oxo-glutaryl-[acp] methyl ester reductase activity)|go:"GO:0102132"(obsolete 3-oxo-pimeloyl-[acp] methyl ester reductase activity)|interpro:IPR002582(Holo-[acyl carrier protein] synthase)|interpro:IPR004568(Phosphopantethiene-protein transferase)|interpro:IPR008278(4'-phosphopantetheinyl transferase)|interpro:IPR009081(Acyl carrier protein-like)|interpro:IPR014030(Beta-ketoacyl synthase, N-terminal)|interpro:IPR014031(Beta-ketoacyl synthase, C-terminal)|interpro:IPR016035(Acyl transferase/acyl hydrolase/lysophospholipase)|interpro:IPR016039(Thiolase-like)|interpro:IPR018201|interpro:IPR026025|interpro:IPR036291|interpro:IPR037143 - crc64:613630F9F41FF77C crc64:08B872734CF3AEEA figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:Oo+nwXD8kudgDwQdQrpG+d/GvQY559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P53011 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:613630F9F41FF77C crc64:EAF75B9DE074106B figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P07259 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-14372|uniprotkb:A2TBN0|uniprotkb:Q06HN1|uniprotkb:D6VW55|ensemblfungi:YJL130C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:pyr1_yeast(display_long)|uniprotkb:J0686(orf name)|uniprotkb:YJL130C(locus name)|uniprotkb:URA2(gene name)|psi-mi:URA2(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012405.2|sgd:S000003666|go:"GO:0004070"(aspartate carbamoyltransferase activity)|go:"GO:0004088"("carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity")|go:"GO:0004151"(dihydroorotase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006207"('de novo' pyrimidine nucleobase biosynthetic process)|go:"GO:0006228"(UTP biosynthetic process)|go:"GO:0006541"(glutamine metabolic process)|go:"GO:0006807"(nitrogen compound metabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016597"(amino acid binding)|go:"GO:0019240"(citrulline biosynthetic process)|go:"GO:0044205"('de novo' UMP biosynthetic process)|go:"GO:0045984"(negative regulation of pyrimidine nucleobase metabolic process)|go:"GO:0046872"(metal ion binding)|interpro:IPR002082(Aspartate carbamoyltransferase, eukaryotic)|interpro:IPR002474(Carbamoyl phosphate synthase, small subunit, N-terminal)|interpro:IPR005479(Carbamoyl phosphate synthetase, large subunit, ATP-binding)|interpro:IPR005480(Carbamoyl phosphate synthetase, large subunit, oligomerisation)|interpro:IPR005483(Carbamoyl phosphate synthase, large subunit)|interpro:IPR006130(Aspartate/ornithine carbamoyltransferase)|ensemblfungi:YJL130C(gene)|ensemblfungi:YJL130C_mRNA(transcript)|interpro:IPR006131(Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region)|interpro:IPR006132(Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding)|interpro:IPR006274(Carbamoyl phosphate synthase, small subunit)|interpro:IPR006275(Carbamoyl phosphate synthase, large subunit, glutamine-dependent)|interpro:IPR011607(MGS-like)|interpro:IPR011761(ATP-grasp fold)|interpro:IPR013815(ATP-grasp fold, subdomain 1)|interpro:IPR016185(PreATP-grasp-like fold)|interpro:IPR017926|interpro:IPR029062|interpro:IPR032466|interpro:IPR035686|interpro:IPR036480|interpro:IPR036901|interpro:IPR036914|interpro:IPR036897|reactome:R-SCE-500753|mint:P07259|dip:DIP-7215N - crc64:613630F9F41FF77C crc64:D5A47F4E42A9B1A7 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:gc7xepqIGcYGssYFCLBvLnTogPE559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P41811 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-4898|uniprotkb:D6VU12|ensemblfungi:YGL137W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:copb2_yeast(display_long)|uniprotkb:SEC27(gene name)|psi-mi:SEC27(display_short)|uniprotkb:YGL137W(locus name)|uniprotkb:G2827(orf name)|uniprotkb:Beta'-coat protein(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011378.1|sgd:S000003105|dip:DIP-6468N|mint:P41811|ensemblfungi:YGL137W(gene)|ensemblfungi:YGL137W_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005198"(structural molecule activity)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0030126"(COPI vesicle coat)|go:"GO:0032511"(late endosome to vacuole transport via multivesicular body sorting pathway)|go:"GO:0043130"(ubiquitin binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR006692(Coatomer, WD associated region)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016453(Coatomer, beta' subunit)|interpro:IPR020472|interpro:IPR036322|rcsb pdb:2YNN|rcsb pdb:2YNO|rcsb pdb:2YNP|rcsb pdb:4J73|rcsb pdb:4J77|rcsb pdb:4J78|rcsb pdb:4J79|rcsb pdb:4J81|rcsb pdb:4J82|rcsb pdb:4J84|rcsb pdb:4J86|reactome:R-SCE-6807878|reactome:R-SCE-6811434 - crc64:613630F9F41FF77C crc64:6A5E50BBEB02CB58 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:I39s3JCseIpdjMGPdNLqEgH8SGk559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P19882 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-8586|uniprotkb:D6VYQ6|ensemblfungi:YLR259C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:hsp60_yeast(display_long)|uniprotkb:HSP60(gene name)|psi-mi:HSP60(display_short)|uniprotkb:MIF4(gene name synonym)|uniprotkb:YLR259C(locus name)|uniprotkb:L8479.10(orf name)|uniprotkb:Stimulator factor I 66 kDa component(gene name synonym)|uniprotkb:P66(gene name synonym)|uniprotkb:CPN60(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_013360.1|sgd:S000004249|mint:P19882|dip:DIP-7648N|ensemblfungi:YLR259C(gene)|ensemblfungi:YLR259C_mRNA(transcript)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005829"(cytosol)|go:"GO:0006457"(protein folding)|go:"GO:0006458"('de novo' protein folding)|go:"GO:0008637"(apoptotic mitochondrial changes)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0034514"(mitochondrial unfolded protein response)|go:"GO:0042026"(protein refolding)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0045041"(protein import into mitochondrial intermembrane space)|go:"GO:0050821"(protein stabilization)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051087"(chaperone binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051604"(protein maturation)|interpro:IPR001844(Chaperonin Cpn60)|interpro:IPR002423(Chaperonin Cpn60/TCP-1)|interpro:IPR018370|interpro:IPR027409|interpro:IPR027410|interpro:IPR027413|reactome:R-SCE-1268020 - crc64:613630F9F41FF77C crc64:279DC3AF5A2B0A3E figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:DoMJw4ScT3htVDJn+ZJD5fIlSOA559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:Q12499 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-12126|uniprotkb:D6W309|ensemblfungi:YOR310C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:nop58_yeast(display_long)|uniprotkb:Nucleolar protein 5(gene name synonym)|uniprotkb:NOP58(gene name)|psi-mi:NOP58(display_short)|uniprotkb:NOP5(gene name synonym)|uniprotkb:YOR310C(locus name)|uniprotkb:O6108(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 ensemblfungi:YOR310C(gene)|ensemblfungi:YOR310C_mRNA(transcript)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0017069"(snRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:1902570"(protein localization to nucleolus)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-4570464|reactome:R-SCE-6791226|rcsb pdb:6ZQC|refseq:NP_014955.1|sgd:S000005837|dip:DIP-5843N|mint:Q12499 - crc64:613630F9F41FF77C crc64:8A2889448B2A19E2 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:Dtk1A6GOVO3KgTak8cTHjO+eDQ4559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P15646 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - crc64:613630F9F41FF77C crc64:56A8B958A7B6066E figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P05030 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-13501|uniprotkb:D6VUC9|ensemblfungi:YGL008C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:pma1_yeast(display_long)|uniprotkb:PMA1(gene name)|psi-mi:PMA1(display_short)|uniprotkb:Proton pump 1(gene name synonym)|uniprotkb:YGL008C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011507.1|sgd:S000002976|interpro:IPR023214|interpro:IPR023298|interpro:IPR023299|interpro:IPR036412|interpro:IPR044492|ensemblfungi:YGL008C(gene)|ensemblfungi:YGL008C_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0008553"(P-type proton-exporting transporter activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0045121"(membrane raft)|go:"GO:0046872"(metal ion binding)|go:"GO:0051453"(regulation of intracellular pH)|go:"GO:0055085"(transmembrane transport)|go:"GO:0120029"(proton export across plasma membrane)|go:"GO:1902600"(proton transmembrane transport)|go:"GO:1902906"(proteasome storage granule assembly)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001757(ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter)|interpro:IPR004014(ATPase, P-type cation-transporter, N-terminal)|interpro:IPR006534(Plasma-membrane proton-efflux P-type ATPase)|interpro:IPR008250(E1-E2 ATPase-associated region)|interpro:IPR018303|mint:P05030|dip:DIP-2537N - crc64:613630F9F41FF77C crc64:AA1E93966B37E8E1 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:TMBBGdTUobxIviFblM9X/errjvw559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P38873 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-24864|uniprotkb:D3DLD4|ensemblfungi:YHR186C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:kog1_yeast(display_long)|uniprotkb:Kontroller of growth protein 1(gene name synonym)|uniprotkb:Local anesthetic-sensitive protein 24(gene name synonym)|uniprotkb:YHR186C(locus name)|uniprotkb:KOG1(gene name)|psi-mi:KOG1(display_short)|uniprotkb:LAS24(gene name synonym)|uniprotkb:H9998.14(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012056.1|sgd:S000001229|mint:P38873|dip:DIP-2639N|ensemblfungi:YHR186C(gene)|ensemblfungi:YHR186C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031929"(TOR signaling)|go:"GO:0031931"(TORC1 complex)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0071230"(cellular response to amino acid stimulus)|go:"GO:0071902"(positive regulation of protein serine/threonine kinase activity)|interpro:IPR000357(HEAT)|interpro:IPR001680(WD40 repeat)|interpro:IPR004083(Regulatory associated protein of TOR)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR029347|interpro:IPR036322|reactome:R-SCE-3371571|reactome:R-SCE-9639288 - crc64:613630F9F41FF77C crc64:B927EE93700176D3 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:8fDDVTuayLjREVAHrrpxJ9ExeCM559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P32787 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-10299|ensemblfungi:YJR144W|uniprotkb:D6VWW3 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:mg101_yeast(display_long)|uniprotkb:MGM101(gene name)|psi-mi:MGM101(display_short)|uniprotkb:MGM9(gene name synonym)|uniprotkb:YJR144W(locus name)|uniprotkb:J2181(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012678.1|sgd:S000003905|ensemblfungi:YJR144W(gene)|ensemblfungi:YJR144W_mRNA(transcript)|go:"GO:0000002"(mitochondrial genome maintenance)|go:"GO:0000262"(mitochondrial chromosome)|go:"GO:0000725"(recombinational repair)|go:"GO:0003677"(DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006281"(DNA repair)|go:"GO:0036297"(interstrand cross-link repair)|go:"GO:0042645"(mitochondrial nucleoid)|interpro:IPR009446(Mitochondrial genome maintenance MGM101)|dip:DIP-5044N - crc64:613630F9F41FF77C crc64:E14C17F2E837D6F0 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:kuFUiWOdeQ0qj6inlmJdWNnZMfs559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P15703 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-3605|uniprotkb:D6VV59|ensemblfungi:YGR282C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:bgl2_yeast(display_long)|uniprotkb:Exo-1,3-beta-glucanase(gene name synonym)|uniprotkb:GP29(gene name synonym)|uniprotkb:Soluble cell wall protein 9(gene name synonym)|uniprotkb:YGR282C(locus name)|uniprotkb:BGL2(gene name)|psi-mi:BGL2(display_short)|uniprotkb:SCW9(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011798.1|sgd:S000003514|dip:DIP-6341N|ensemblfungi:YGR282C(gene)|ensemblfungi:YGR282C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0004338"(glucan exo-1,3-beta-glucosidase activity)|go:"GO:0005576"(extracellular region)|go:"GO:0005975"(carbohydrate metabolic process)|go:"GO:0008061"(chitin binding)|go:"GO:0009277"(fungal-type cell wall)|go:"GO:0009986"(cell surface)|go:"GO:0031505"(fungal-type cell wall organization)|go:"GO:0042124"(1,3-beta-glucanosyltransferase activity)|go:"GO:0042973"(glucan endo-1,3-beta-D-glucosidase activity)|go:"GO:0071555"(cell wall organization)|interpro:IPR000490(Glycoside hydrolase, family 17)|interpro:IPR017853(Glycoside hydrolase, catalytic core) - crc64:613630F9F41FF77C crc64:118D75528C5AD383 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:PutcI0ZKbzt1777Q5DT/RX+G1F4559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:Q12460 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-17148|ensemblfungi:YLR197W|uniprotkb:D6VYK0 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:nop56_yeast(display_long)|uniprotkb:SIK1(gene name synonym)|uniprotkb:Ribosome biosynthesis protein SIK1(gene name synonym)|uniprotkb:YLR197W(locus name)|uniprotkb:L8167.9(orf name)|uniprotkb:NOP56(gene name)|psi-mi:NOP56(display_short)|uniprotkb:Suppressor of I kappa b protein 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 ensemblfungi:YLR197W(gene)|ensemblfungi:YLR197W_mRNA(transcript)|go:"GO:0000154"(rRNA modification)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|refseq:NP_013298.1|sgd:S000004187|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-4405N|mint:Q12460 - crc64:613630F9F41FF77C crc64:F8522A5870EF4842 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:l3UAmoOUECH1uov6nv7MSwSv/3s559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P16862 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-9435|ensemblfungi:YMR205C|uniprotkb:D6W030 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:pfka2_yeast(display_long)|uniprotkb:PFK2(gene name)|psi-mi:PFK2(display_short)|uniprotkb:YMR205C(locus name)|uniprotkb:YM8325.06C(orf name)|uniprotkb:Phosphohexokinase(gene name synonym)|uniprotkb:ATP-dependent 6-phosphofructokinase(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 ensemblfungi:YMR205C(gene)|ensemblfungi:YMR205C_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0003872"(6-phosphofructokinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005945"(6-phosphofructokinase complex)|go:"GO:0006002"(fructose 6-phosphate metabolic process)|go:"GO:0006096"(glycolytic process)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0016208"(AMP binding)|go:"GO:0030388"(fructose 1,6-bisphosphate metabolic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0048029"(monosaccharide binding)|go:"GO:0051453"(regulation of intracellular pH)|go:"GO:0061621"(canonical glycolysis)|go:"GO:0070072"(vacuolar proton-transporting V-type ATPase complex assembly)|go:"GO:0070095"(fructose-6-phosphate binding)|go:"GO:1902600"(proton transmembrane transport)|interpro:IPR000023(Phosphofructokinase)|interpro:IPR009161(6-phosphofructokinase, eukaryotic type)|interpro:IPR015912(Phosphofructokinase, conserved site)|interpro:IPR022953|interpro:IPR029068|interpro:IPR035966|rcsb pdb:3O8O|reactome:R-SCE-6798695|reactome:R-SCE-70171|refseq:NP_013932.1|sgd:S000004818|mint:P16862|dip:DIP-2619N - crc64:613630F9F41FF77C crc64:82CE6402CEDBBCB2 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:PurR+sy8cBMAoGxl0dMMcxuz8wI559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P07251 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-3234|uniprotkb:Q92449|ensemblfungi:YBL099W|uniprotkb:D6VPQ6 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:atpa_yeast(display_long)|uniprotkb:ATP1(gene name)|psi-mi:ATP1(display_short)|uniprotkb:YBL0827(orf name)|uniprotkb:YBL099W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 ensemblfungi:YBL099W(gene)|ensemblfungi:YBL099W_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005754"(mitochondrial proton-transporting ATP synthase, catalytic core)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005829"(cytosol)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|interpro:IPR023366|interpro:IPR027417|interpro:IPR033732|interpro:IPR036121|refseq:NP_009453.2|sgd:S000000195|dip:DIP-3025N|mint:P07251|interpro:IPR038376|rcsb pdb:2HLD|rcsb pdb:2WPD|rcsb pdb:2XOK|rcsb pdb:3FKS|rcsb pdb:3OE7|rcsb pdb:3OEE|rcsb pdb:3OEH|rcsb pdb:3OFN|rcsb pdb:3ZIA|rcsb pdb:3ZRY|rcsb pdb:4B2Q|rcsb pdb:6B8H|rcsb pdb:6CP3|rcsb pdb:6CP6|reactome:R-SCE-163210|reactome:R-SCE-8949613 - crc64:613630F9F41FF77C crc64:E8041D289B924696 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:yqbEHfcYrXujvE9wfeN4KyeOHD8559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:Q05022 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-16011|uniprotkb:D6W054|ensemblfungi:YMR229C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:rrp5_yeast(display_long)|uniprotkb:RRP5(gene name)|psi-mi:RRP5(display_short)|uniprotkb:FMI1(gene name synonym)|uniprotkb:YMR229C(locus name)|uniprotkb:YM9959.11C(orf name)|uniprotkb:Ribosomal RNA-processing protein 5(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein RRP5(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_013956.1|sgd:S000004842|ensemblfungi:YMR229C(gene)|ensemblfungi:YMR229C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034463"(90S preribosome assembly)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0034513"(box H/ACA snoRNA binding)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR003029(S1, RNA binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR022967|rcsb pdb:5C9S|rcsb pdb:5NLG|rcsb pdb:5WLC|rcsb pdb:5WWM|rcsb pdb:5WYJ|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-6535N|mint:Q05022 - crc64:613630F9F41FF77C crc64:39BF46E5587B3B0A figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:FUIsTk3NLRDu8llnVgX5cDLAbB8559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P35169 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-19374|uniprotkb:D6VWN7|ensemblfungi:YJR066W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:tor1_yeast(display_long)|uniprotkb:DRR1(gene name synonym)|uniprotkb:TOR1(gene name)|psi-mi:TOR1(display_short)|uniprotkb:YJR066W(locus name)|uniprotkb:J1803(orf name)|uniprotkb:Phosphatidylinositol kinase homolog TOR1(gene name synonym)|uniprotkb:Target of rapamycin kinase 1(gene name synonym)|uniprotkb:Dominant rapamycin resistance protein 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012600.1|sgd:S000003827|rcsb pdb:2KIT|reactome:R-SCE-1257604|reactome:R-SCE-3371571|reactome:R-SCE-389357|reactome:R-SCE-5218920|reactome:R-SCE-6804757|reactome:R-SCE-9639288|ensemblfungi:YJR066W(gene)|ensemblfungi:YJR066W_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006413"(translational initiation)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0010008"(endosome membrane)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0016242"(negative regulation of macroautophagy)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0031234"(extrinsic component of cytoplasmic side of plasma membrane)|go:"GO:0031505"(fungal-type cell wall organization)|go:"GO:0031929"(TOR signaling)|go:"GO:0031930"(mitochondria-nucleus signaling pathway)|go:"GO:0031931"(TORC1 complex)|go:"GO:0031932"(TORC2 complex)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0034605"(cellular response to heat)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042790"(nucleolar large rRNA transcription by RNA polymerase I)|go:"GO:0044387"(negative regulation of protein kinase activity by regulation of protein phosphorylation)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0090153"(regulation of sphingolipid biosynthetic process)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1905356"(regulation of snRNA pseudouridine synthesis)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR003151(PIK-related kinase, FAT)|interpro:IPR003152(PIK-related kinase, FATC)|interpro:IPR009076(FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR014009(PIK-related kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR024585|interpro:IPR026683|interpro:IPR036738|interpro:IPR036940|rcsb pdb:1W1N|rcsb pdb:2KIO|dip:DIP-917N|mint:P35169 - crc64:613630F9F41FF77C crc64:ACB1781B9963BB1E figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:3aJf92VnNYbaZZj1+i3uk/IvNQI559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P22336 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-14971|uniprotkb:P38906|uniprotkb:D6VPL9|ensemblfungi:YAR007C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:rfa1_yeast(display_long)|uniprotkb:RFA1(gene name)|psi-mi:RFA1(display_short)|uniprotkb:BUF2(gene name synonym)|uniprotkb:YAR007C(locus name)|uniprotkb:FUN3(orf name)|uniprotkb:Replication protein A 69 kDa DNA-binding subunit(gene name synonym)|uniprotkb:Single-stranded DNA-binding protein(gene name synonym)|uniprotkb:DNA-binding protein BUF2(gene name synonym)|uniprotkb:RPA1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_009404.1|sgd:S000000065|reactome:R-SCE-5656121|reactome:R-SCE-5656169|reactome:R-SCE-5696397|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-68962|reactome:R-SCE-69166|reactome:R-SCE-5655862|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|ensemblfungi:YAR007C(gene)|ensemblfungi:YAR007C_mRNA(transcript)|go:"GO:0000722"(telomere maintenance via recombination)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0006260"(DNA replication)|go:"GO:0000794"(condensed nuclear chromosome)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0006265"(DNA topological change)|go:"GO:0006268"(DNA unwinding involved in DNA replication)|go:"GO:0006281"(DNA repair)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006312"(mitotic recombination)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0007004"(telomere maintenance via telomerase)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005662"(DNA replication factor A complex)|go:"GO:0007131"(reciprocal meiotic recombination)|go:"GO:0010833"(telomere maintenance via telomere lengthening)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030491"(heteroduplex formation)|go:"GO:0043047"(single-stranded telomeric DNA binding)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0043934"(sporulation)|go:"GO:0045184"(establishment of protein localization)|go:"GO:0046872"(metal ion binding)|go:"GO:0051321"(meiotic cell cycle)|interpro:IPR004365(Nucleic acid binding, OB-fold, tRNA/helicase-type)|interpro:IPR004591(Replication factor-a protein 1 Rpa1)|interpro:IPR007199(Replication factor-A protein 1, N-terminal)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR013955(Replication factor-A, C-terminal)|interpro:IPR031657|rcsb pdb:1YNX|rcsb pdb:5M1X|rcsb pdb:5OMB|rcsb pdb:5OMC|rcsb pdb:6I52|reactome:R-SCE-110312|reactome:R-SCE-110320|reactome:R-SCE-176187|dip:DIP-2512N|mint:P22336 - crc64:613630F9F41FF77C crc64:7EB8DFA6910EF8A8 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:g7zFw4pOaeYLHSwBeKICZVqA13I559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P17255 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-20245|uniprotkb:O74301|uniprotkb:Q9Y7W5|uniprotkb:D6VRG7|ensemblfungi:YDL185W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:vata_yeast(display_long)|uniprotkb:VMA1(gene name)|psi-mi:VMA1(display_short)|uniprotkb:CLS8(gene name synonym)|uniprotkb:TFP1(gene name synonym)|uniprotkb:YDL185W(locus name)|uniprotkb:D1286(orf name)|uniprotkb:Vacuolar proton pump subunit A(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_010096.1|sgd:S000002344|mint:P17255|ensemblfungi:YDL185W(gene)|ensemblfungi:YDL185W_mRNA(transcript)|go:"GO:0000221"(vacuolar proton-transporting V-type ATPase, V1 domain)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005524"(ATP binding)|go:"GO:0006314"(intron homing)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0012505"(endomembrane system)|go:"GO:0016539"(intein-mediated protein splicing)|go:"GO:0044267"(cellular protein metabolic process)|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|go:"GO:1902600"(proton transmembrane transport)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR003586(Hedgehog/intein hint domain, C-terminal)|interpro:IPR003587(Hedgehog/intein hint, N-terminal)|interpro:IPR004042(Intein DOD homing endonuclease)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR006141(Intein splicing site)|interpro:IPR006142(Intein)|interpro:IPR007868(Hom-end-associated Hint)|interpro:IPR007869(Homing endonuclease)|interpro:IPR020003|interpro:IPR022878|interpro:IPR023366|interpro:IPR027417|interpro:IPR027434|interpro:IPR030934|interpro:IPR031686|interpro:IPR036121|interpro:IPR036844|rcsb pdb:1DFA|rcsb pdb:1EF0|rcsb pdb:1GPP|rcsb pdb:1JVA|rcsb pdb:1LWS|rcsb pdb:1LWT|rcsb pdb:1UM2|rcsb pdb:1VDE|rcsb pdb:3J9T|rcsb pdb:3J9U|rcsb pdb:3J9V|rcsb pdb:5BW9|rcsb pdb:5D80|rcsb pdb:5VOX|rcsb pdb:5VOY|rcsb pdb:5VOZ|reactome:R-SCE-1222556|reactome:R-SCE-77387|reactome:R-SCE-917977|reactome:R-SCE-9639288|interpro:IPR024034|dip:DIP-2293N - crc64:613630F9F41FF77C crc64:2A4C65D2F59426FD figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:YdmGZxIMX2IXMHC4EO85uOAf1Hg559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P07149 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-6795|uniprotkb:D6VX19|uniprotkb:Q05747|ensemblfungi:YKL182W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:fas1_yeast(display_long)|uniprotkb:YKL182W(locus name)|uniprotkb:FAS1(gene name)|psi-mi:FAS1(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012739.1|sgd:S000001665|mint:P07149|dip:DIP-742N|ensemblfungi:YKL182W(gene)|ensemblfungi:YKL182W_mRNA(transcript)|go:"GO:0004313"([acyl-carrier-protein] S-acetyltransferase activity)|go:"GO:0004314"([acyl-carrier-protein] S-malonyltransferase activity)|go:"GO:0004317"(3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity)|go:"GO:0004318"("enoyl-[acyl-carrier-protein] reductase (NADH) activity")|go:"GO:0004319"("enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity")|go:"GO:0004320"(oleoyl-[acyl-carrier-protein] hydrolase activity)|go:"GO:0004321"(fatty-acyl-CoA synthase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005811"(lipid droplet)|go:"GO:0005829"(cytosol)|go:"GO:0005835"(fatty acid synthase complex)|go:"GO:0008659"("(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity")|go:"GO:0008693"(3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity)|go:"GO:0016295"(myristoyl-[acyl-carrier-protein] hydrolase activity)|go:"GO:0016296"(palmitoyl-[acyl-carrier-protein] hydrolase activity)|go:"GO:0016409"(palmitoyltransferase activity)|go:"GO:0016631"(enoyl-[acyl-carrier-protein] reductase activity)|go:"GO:0019171"(3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity)|go:"GO:0042759"(long-chain fatty acid biosynthetic process)|go:"GO:0047451"(3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity)|interpro:IPR001227(Acyl transferase region)|interpro:IPR002539(MaoC-like dehydratase)|interpro:IPR003965(Fatty acid synthase)|interpro:IPR013565(Region of unknown function DUF1729)|interpro:IPR013785(Aldolase-type TIM barrel)|interpro:IPR014043(Acyl transferase)|interpro:IPR016035(Acyl transferase/acyl hydrolase/lysophospholipase)|interpro:IPR016452(Fatty acid synthase, beta subunit, fungi)|interpro:IPR029069|interpro:IPR032088|interpro:IPR039569|interpro:IPR040883|interpro:IPR041099|rcsb pdb:2PFF|rcsb pdb:2UV8|rcsb pdb:2VKZ|rcsb pdb:3HMJ|rcsb pdb:6JSH|rcsb pdb:6JSI|rcsb pdb:6QL5|rcsb pdb:6QL6|rcsb pdb:6QL7|rcsb pdb:6QL9|rcsb pdb:6TA1|rcsb pdb:6U5T|rcsb pdb:6U5U|rcsb pdb:6WC7 - crc64:613630F9F41FF77C crc64:43AA85A6071D8EAA figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:ccDAdd+J4iGvVqG1vs1bXEJUVqY559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P14540 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-2447|uniprotkb:D6VXM7|ensemblfungi:YKL060C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:alf_yeast(display_long)|uniprotkb:FBA1(gene name)|psi-mi:FBA1(display_short)|uniprotkb:YKL320(orf name)|uniprotkb:Fructose-1,6-bisphosphate aldolase(gene name synonym)|uniprotkb:YKL060C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012863.1|sgd:S000001543|dip:DIP-4702N|mint:P14540|ensemblfungi:YKL060C(gene)|ensemblfungi:YKL060C_mRNA(transcript)|go:"GO:0004332"(fructose-bisphosphate aldolase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006094"(gluconeogenesis)|go:"GO:0006096"(glycolytic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:1904408"(melatonin binding)|interpro:IPR000771(Ketose-bisphosphate aldolase, class-II)|interpro:IPR006411(Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype)|interpro:IPR013785(Aldolase-type TIM barrel) - crc64:613630F9F41FF77C crc64:C67E61BA5C7E8E4C figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:gEr3mYQBb47yKJji/7xOsQjt3+Y559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P60010 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-2169|uniprotkb:P02579|uniprotkb:Q9P3X6|uniprotkb:Q9P3X7|uniprotkb:D6VTJ1|ensemblfungi:YFL039C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:act_yeast(display_long)|uniprotkb:ACT1(gene name)|psi-mi:ACT1(display_short)|uniprotkb:ABY1(gene name synonym)|uniprotkb:END7(gene name synonym)|uniprotkb:YFL039C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_116614.1|sgd:S000001855|dip:DIP-310N|mint:P60010|ensemblfungi:YFL039C(gene)|ensemblfungi:YFL039C_mRNA(transcript)|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000142"(cellular bud neck contractile ring)|go:"GO:0000812"(Swr1 complex)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005524"(ATP binding)|go:"GO:0005884"(actin filament)|go:"GO:0006281"(DNA repair)|go:"GO:0006897"(endocytosis)|go:"GO:0009306"(protein secretion)|go:"GO:0016573"(histone acetylation)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030476"(ascospore wall assembly)|go:"GO:0030479"(actin cortical patch)|go:"GO:0031011"(Ino80 complex)|go:"GO:0032432"(actin filament bundle)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:1902404"(mitotic actomyosin contractile ring contraction)|interpro:IPR004000(Actin/actin-like)|interpro:IPR004001(Actin, conserved site)|interpro:IPR020902|interpro:IPR043129|rcsb pdb:1YAG|rcsb pdb:1YVN|rcsb pdb:5NBL|rcsb pdb:5NBM|rcsb pdb:5NBN|rcsb pdb:5Y81|reactome:R-SCE-114608|reactome:R-SCE-190873|reactome:R-SCE-196025|reactome:R-SCE-2029482|reactome:R-SCE-5626467|reactome:R-SCE-5663213|reactome:R-SCE-8856828|reactome:R-SCE-8980692|reactome:R-SCE-9013026 - crc64:613630F9F41FF77C crc64:87AC19B0B0BC9E71 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:yfgwiWq/Y0HviACqgjjUugpEKLw559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P15424 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-11308|ensemblfungi:YDR194C|uniprotkb:D6VSH6 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:ms116_yeast(display_long)|uniprotkb:MSS116(gene name)|psi-mi:MSS116(display_short)|uniprotkb:YD9346.05C(orf name)|uniprotkb:YDR194C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 ensemblfungi:YDR194C(gene)|ensemblfungi:YDR194C_mRNA(transcript)|go:"GO:0000372"(Group I intron splicing)|go:"GO:0000373"(Group II intron splicing)|go:"GO:0000963"(mitochondrial RNA processing)|go:"GO:0003723"(RNA binding)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|rcsb pdb:3I5X|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|rcsb pdb:3I5Y|rcsb pdb:3I61|rcsb pdb:3I62|rcsb pdb:3SQW|rcsb pdb:3SQX|rcsb pdb:4DB2|rcsb pdb:4DB4|rcsb pdb:4TYN|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006364"(rRNA processing)|rcsb pdb:4TYW|rcsb pdb:4TYY|rcsb pdb:4TZ0|go:"GO:0006392"(transcription elongation from mitochondrial promoter)|go:"GO:0006397"(mRNA processing)|rcsb pdb:4TZ6|go:"GO:0006417"(regulation of translation)|go:"GO:0033592"(RNA strand annealing activity)|go:"GO:0034337"(RNA folding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_010480.1|sgd:S000002602|dip:DIP-5368N - crc64:613630F9F41FF77C crc64:DAEECCA4ED0CB2BE figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:J1APSuvs6ka/ROwKuDW61gTWdTc559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P21576 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-20460|uniprotkb:D6VXT7|ensemblfungi:YKR001C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:vps1_yeast(display_long)|uniprotkb:VPS1(gene name)|psi-mi:VPS1(display_short)|uniprotkb:LAM1(gene name synonym)|uniprotkb:SPO15(gene name synonym)|uniprotkb:YKR001C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012926.1|sgd:S000001709|ensemblfungi:YKR001C(gene)|ensemblfungi:YKR001C_mRNA(transcript)|go:"GO:0000266"(mitochondrial fission)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0003374"(dynamin family protein polymerization involved in mitochondrial fission)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005770"(late endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005829"(cytosol)|go:"GO:0005874"(microtubule)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006897"(endocytosis)|go:"GO:0007031"(peroxisome organization)|go:"GO:0007034"(vacuolar transport)|go:"GO:0008017"(microtubule binding)|go:"GO:0016020"(membrane)|go:"GO:0016559"(peroxisome fission)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030479"(actin cortical patch)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0051301"(cell division)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0060988"(lipid tube assembly)|go:"GO:0061025"(membrane fusion)|interpro:IPR000375(Dynamin central region)|interpro:IPR001401(Dynamin, GTPase region)|interpro:IPR003130(Dynamin GTPase effector)|interpro:IPR019762|interpro:IPR020850|interpro:IPR022812|interpro:IPR027417|interpro:IPR030381|reactome:R-SCE-169911|reactome:R-SCE-190873|reactome:R-SCE-196025|reactome:R-SCE-75153|reactome:R-SCE-8856828|dip:DIP-6290N|mint:P21576 - crc64:613630F9F41FF77C crc64:D9AB527C04B3A977 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:/ucK+w1ANSorx3DQ+hTcT2UMgYg559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P00950 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-13517|uniprotkb:Q02117|uniprotkb:D6VX45|ensemblfungi:YKL152C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:pmg1_yeast(display_long)|uniprotkb:GPM1(gene name)|psi-mi:GPM1(display_short)|uniprotkb:GPM(gene name synonym)|uniprotkb:YKL152C(locus name)|uniprotkb:YKL607(orf name)|uniprotkb:Phosphoglyceromutase 1(gene name synonym)|uniprotkb:MPGM 1(gene name synonym)|uniprotkb:BPG-dependent PGAM 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012770.1|sgd:S000001635|go:"GO:0006096"(glycolytic process)|interpro:IPR001345(Phosphoglycerate/bisphosphoglycerate mutase)|interpro:IPR005952(Phosphoglycerate mutase 1)|interpro:IPR013078(Phosphoglycerate mutase)|interpro:IPR029033|rcsb pdb:1BQ3|rcsb pdb:1BQ4|rcsb pdb:1QHF|rcsb pdb:3PGM|rcsb pdb:4PGM|ensemblfungi:YKL152C(gene)|ensemblfungi:YKL152C_mRNA(transcript)|go:"GO:0004619"(phosphoglycerate mutase activity)|rcsb pdb:5PGM|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005829"(cytosol)|go:"GO:0006094"(gluconeogenesis)|mint:P00950|dip:DIP-6260N - crc64:613630F9F41FF77C crc64:45E1A9CCDBDC104D figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:O4lo573Bz6RNmbbe4HdKcMKVaA0559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P06778 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-14719|ensemblfungi:YML032C|uniprotkb:D6VZE2 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:rad52_yeast(display_long)|uniprotkb:YML032C(locus name)|uniprotkb:RAD52(gene name)|psi-mi:RAD52(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 ensemblfungi:YML032C_mRNA(transcript)|go:"GO:0000150"(DNA strand exchange activity)|go:"GO:0000228"(nuclear chromosome)|go:"GO:0000709"(meiotic joint molecule formation)|go:"GO:0000722"(telomere maintenance via recombination)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000727"(double-strand break repair via break-induced replication)|ensemblfungi:YML032C(gene)|go:"GO:0000730"(DNA recombinase assembly)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006277"(DNA amplification)|go:"GO:0006301"(postreplication repair)|go:"GO:0006312"(mitotic recombination)|go:"GO:0043504"(mitochondrial DNA repair)|go:"GO:0045002"(double-strand break repair via single-strand annealing)|go:"GO:1904877"(positive regulation of DNA ligase activity)|go:"GO:1990814"(DNA/DNA annealing activity)|interpro:IPR004585(Recombination protein Rad52)|interpro:IPR007232(Rad52/22 double-strand break repair protein)|interpro:IPR041247|interpro:IPR042525|reactome:R-SCE-3108214|reactome:R-SCE-5685938|refseq:NP_013680.2|sgd:S000004494|dip:DIP-3N|mint:P06778 - crc64:613630F9F41FF77C crc64:4F5D07480A05B564 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:5TMIwryr0SiR5WDNnXFVoXSqRIc559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P27476 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-12274|ensemblfungi:YGR159C|uniprotkb:D6VUT9 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:nsr1_yeast(display_long)|uniprotkb:NSR1(gene name)|psi-mi:NSR1(display_short)|uniprotkb:YGR159C(locus name)|uniprotkb:G7001(orf name)|uniprotkb:p67(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 ensemblfungi:YGR159C(gene)|ensemblfungi:YGR159C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034276|interpro:IPR035979|interpro:IPR034272|refseq:NP_011675.1|sgd:S000003391|mint:P27476|dip:DIP-5537N - crc64:613630F9F41FF77C crc64:90DEEE7BBC20BC0C figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:q0/AgJC55iTpn/5kCsxal2kQ7Ls559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P41810 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-4869|uniprotkb:Q03779|uniprotkb:D6VSL9|ensemblfungi:YDR238C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:copb_yeast(display_long)|uniprotkb:SEC26(gene name)|psi-mi:SEC26(display_short)|uniprotkb:YDR238C(locus name)|uniprotkb:YD8419.05C(orf name)|uniprotkb:Beta-coat protein(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 sgd:S000002646|refseq:NP_010524.3|dip:DIP-6467N|mint:P41810|ensemblfungi:YDR238C(gene)|ensemblfungi:YDR238C_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005198"(structural molecule activity)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0030126"(COPI vesicle coat)|interpro:IPR000225(Armadillo)|interpro:IPR002553(Clathrin/coatomer adaptor, adaptin-like, N-terminal)|interpro:IPR011710(Coatomer, beta subunit, C-terminal)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016460(Coatomer, beta subunit)|interpro:IPR029446|reactome:R-SCE-6798695|reactome:R-SCE-6807878|reactome:R-SCE-6811434 - crc64:613630F9F41FF77C crc64:885420DB026BCFA3 figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:ZfLp1BUmvVuTiXn7/Zbf/3m6VtE559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:Q08281 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-2047093|uniprotkb:D6W1T1|uniprotkb:Q92271|ensemblfungi:YOL138C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:rtc1_yeast(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:SEA2(gene name synonym)|uniprotkb:SEH-associated protein 2(gene name synonym)|uniprotkb:YOL138C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820417|imex:IM-23164-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 interpro:IPR037590|refseq:NP_014503.2|sgd:S000005498|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q08281|interpro:IPR036322|ensemblfungi:YOL138C(gene)|ensemblfungi:YOL138C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling) - crc64:613630F9F41FF77C - figure legend:Figure 1 A Track 18, Supp Table 3, Supp. Fig 2 Track6|comment:Elution buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 75 mM NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 0.1% Tween 20, 1mg/ml heparin|comment:Interaction observed in SEA3-/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/12 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:3k6vZ9TxDj/BcLSmeJdAg45Ri14559292 intact-crc:A0383C702F51E7CA|rigid:4kTab4BTct02UuZv+3FQG1Er6/o false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P53011 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820659|imex:IM-23164-17 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:613630F9F41FF77C crc64:EAF75B9DE074106B figure legend:Figure 1 A, Track 21 & 22 Supp. Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:4D4D4530FE2B1F4F|rigid:uBbwcdbVXio/F+dTFtBC8cybvAs false sufficient binding region:499-930|protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P53011 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820520|imex:IM-23164-15 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:613630F9F41FF77C crc64:EAF75B9DE074106B figure legend:Figure 1 A, Track 19, Supp. Table 3|comment:Interaction observed in SEA3-/- cells|comment:Elution buffer - 20mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 1 M NaCl Wash buffer - 20 mM Hepes, pH 7.4, 110 mM KOAc, 2 mM MgCl2, 1% Triton X-100, 0.1% Tween 20, 1 M NaCl|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:6AD02D1EFDE47EC9|rigid:uBbwcdbVXio/F+dTFtBC8cybvAs false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:A6ZPE5 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-7992257|intact:MINT-7980779|ensemblfungi:EDN63635 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:nop58_yeas7(display_long)|uniprotkb:NOP58(gene name)|psi-mi:NOP58(display_short)|uniprotkb:NOP5(gene name synonym)|uniprotkb:Nucleolar protein 5(gene name synonym)|uniprotkb:SCY_5360(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:307796(yeas7)|taxid:307796("Saccharomyces cerevisiae (strain YJM789) (Baker's yeast)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012976(NOSIC)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR036070|interpro:IPR042239|ensemblfungi:EDN63635(transcript)|ensemblfungi:SCY_5360(gene)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing) - crc64:613630F9F41FF77C comment:mint comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:bjNvHkQRBqpNq63oogbhq0OGS7k307796 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P21576 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-20460|uniprotkb:D6VXT7|ensemblfungi:YKR001C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:vps1_yeast(display_long)|uniprotkb:VPS1(gene name)|psi-mi:VPS1(display_short)|uniprotkb:LAM1(gene name synonym)|uniprotkb:SPO15(gene name synonym)|uniprotkb:YKR001C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012926.1|sgd:S000001709|ensemblfungi:YKR001C(gene)|ensemblfungi:YKR001C_mRNA(transcript)|go:"GO:0000266"(mitochondrial fission)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0003374"(dynamin family protein polymerization involved in mitochondrial fission)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005770"(late endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005829"(cytosol)|go:"GO:0005874"(microtubule)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006897"(endocytosis)|go:"GO:0007031"(peroxisome organization)|go:"GO:0007034"(vacuolar transport)|go:"GO:0008017"(microtubule binding)|go:"GO:0016020"(membrane)|go:"GO:0016559"(peroxisome fission)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030479"(actin cortical patch)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0051301"(cell division)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0060988"(lipid tube assembly)|go:"GO:0061025"(membrane fusion)|interpro:IPR000375(Dynamin central region)|interpro:IPR001401(Dynamin, GTPase region)|interpro:IPR003130(Dynamin GTPase effector)|interpro:IPR019762|interpro:IPR020850|interpro:IPR022812|interpro:IPR027417|interpro:IPR030381|reactome:R-SCE-169911|reactome:R-SCE-190873|reactome:R-SCE-196025|reactome:R-SCE-75153|reactome:R-SCE-8856828|dip:DIP-6290N|mint:P21576 - crc64:613630F9F41FF77C crc64:D9AB527C04B3A977 comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:/ucK+w1ANSorx3DQ+hTcT2UMgYg559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P41318 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-28598|uniprotkb:D6W1H1|ensemblfungi:YNL006W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:lst8_yeast(display_long)|uniprotkb:Lethal with SEC13 protein 8(gene name synonym)|uniprotkb:YNL006W(locus name)|uniprotkb:N2005(orf name)|uniprotkb:LST8(gene name)|psi-mi:LST8(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 reactome:R-SCE-3371571|sgd:S000004951|refseq:NP_014392.3|dip:DIP-5318N|reactome:R-SCE-1257604|reactome:R-SCE-389357|reactome:R-SCE-5218920|reactome:R-SCE-6804757|reactome:R-SCE-9639288|ensemblfungi:YNL006W(gene)|ensemblfungi:YNL006W_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005829"(cytosol)|go:"GO:0007165"(signal transduction)|go:"GO:0010008"(endosome membrane)|go:"GO:0030295"(protein kinase activator activity)|go:"GO:0030950"(establishment or maintenance of actin cytoskeleton polarity)|go:"GO:0031234"(extrinsic component of cytoplasmic side of plasma membrane)|go:"GO:0031505"(fungal-type cell wall organization)|go:"GO:0031929"(TOR signaling)|go:"GO:0031930"(mitochondria-nucleus signaling pathway)|go:"GO:0031931"(TORC1 complex)|go:"GO:0031932"(TORC2 complex)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0034399"(nuclear periphery)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|interpro:IPR037588|rcsb pdb:6EMK - crc64:613630F9F41FF77C crc64:536AA1DB8E8151F0 comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:DJkTl61Tdn8EtP/6tE7UFerq8w0559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P00950 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-13517|uniprotkb:Q02117|uniprotkb:D6VX45|ensemblfungi:YKL152C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:pmg1_yeast(display_long)|uniprotkb:GPM1(gene name)|psi-mi:GPM1(display_short)|uniprotkb:GPM(gene name synonym)|uniprotkb:YKL152C(locus name)|uniprotkb:YKL607(orf name)|uniprotkb:Phosphoglyceromutase 1(gene name synonym)|uniprotkb:MPGM 1(gene name synonym)|uniprotkb:BPG-dependent PGAM 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012770.1|sgd:S000001635|go:"GO:0006096"(glycolytic process)|interpro:IPR001345(Phosphoglycerate/bisphosphoglycerate mutase)|interpro:IPR005952(Phosphoglycerate mutase 1)|interpro:IPR013078(Phosphoglycerate mutase)|interpro:IPR029033|rcsb pdb:1BQ3|rcsb pdb:1BQ4|rcsb pdb:1QHF|rcsb pdb:3PGM|rcsb pdb:4PGM|ensemblfungi:YKL152C(gene)|ensemblfungi:YKL152C_mRNA(transcript)|go:"GO:0004619"(phosphoglycerate mutase activity)|rcsb pdb:5PGM|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005829"(cytosol)|go:"GO:0006094"(gluconeogenesis)|mint:P00950|dip:DIP-6260N - crc64:613630F9F41FF77C crc64:45E1A9CCDBDC104D comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:O4lo573Bz6RNmbbe4HdKcMKVaA0559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P15703 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-3605|uniprotkb:D6VV59|ensemblfungi:YGR282C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:bgl2_yeast(display_long)|uniprotkb:Exo-1,3-beta-glucanase(gene name synonym)|uniprotkb:GP29(gene name synonym)|uniprotkb:Soluble cell wall protein 9(gene name synonym)|uniprotkb:YGR282C(locus name)|uniprotkb:BGL2(gene name)|psi-mi:BGL2(display_short)|uniprotkb:SCW9(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011798.1|sgd:S000003514|dip:DIP-6341N|ensemblfungi:YGR282C(gene)|ensemblfungi:YGR282C_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0004338"(glucan exo-1,3-beta-glucosidase activity)|go:"GO:0005576"(extracellular region)|go:"GO:0005975"(carbohydrate metabolic process)|go:"GO:0008061"(chitin binding)|go:"GO:0009277"(fungal-type cell wall)|go:"GO:0009986"(cell surface)|go:"GO:0031505"(fungal-type cell wall organization)|go:"GO:0042124"(1,3-beta-glucanosyltransferase activity)|go:"GO:0042973"(glucan endo-1,3-beta-D-glucosidase activity)|go:"GO:0071555"(cell wall organization)|interpro:IPR000490(Glycoside hydrolase, family 17)|interpro:IPR017853(Glycoside hydrolase, catalytic core) - crc64:613630F9F41FF77C crc64:118D75528C5AD383 comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:PutcI0ZKbzt1777Q5DT/RX+G1F4559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:Q12460 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-17148|ensemblfungi:YLR197W|uniprotkb:D6VYK0 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:nop56_yeast(display_long)|uniprotkb:SIK1(gene name synonym)|uniprotkb:Ribosome biosynthesis protein SIK1(gene name synonym)|uniprotkb:YLR197W(locus name)|uniprotkb:L8167.9(orf name)|uniprotkb:NOP56(gene name)|psi-mi:NOP56(display_short)|uniprotkb:Suppressor of I kappa b protein 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 ensemblfungi:YLR197W(gene)|ensemblfungi:YLR197W_mRNA(transcript)|go:"GO:0000154"(rRNA modification)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|refseq:NP_013298.1|sgd:S000004187|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-4405N|mint:Q12460 - crc64:613630F9F41FF77C crc64:F8522A5870EF4842 comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:l3UAmoOUECH1uov6nv7MSwSv/3s559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P10964 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-15730|uniprotkb:Q99330|uniprotkb:D6W336|ensemblfungi:YOR341W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:rpa1_yeast(display_long)|uniprotkb:RPA190(gene name)|psi-mi:RPA190(display_short)|uniprotkb:RPA1(gene name synonym)|uniprotkb:RRN1(gene name synonym)|uniprotkb:YOR341W(locus name)|uniprotkb:O6276(orf name)|uniprotkb:DNA-directed RNA polymerase I 190 kDa polypeptide(gene name synonym)|uniprotkb:DNA-directed RNA polymerase I largest subunit(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 sgd:S000005868|refseq:NP_014986.3|rcsb pdb:6RQH|rcsb pdb:6RQL|rcsb pdb:6RQT|rcsb pdb:6RRD|rcsb pdb:6RUI|rcsb pdb:6RUO|rcsb pdb:6RWE|rcsb pdb:6TPS|reactome:R-SCE-73762|reactome:R-SCE-73772|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042790"(nucleolar large rRNA transcription by RNA polymerase I)|go:"GO:1990841"(promoter-specific chromatin binding)|interpro:IPR000722(RNA polymerase, alpha subunit)|interpro:IPR006592(RNA polymerase, N-terminal)|interpro:IPR007066(RNA polymerase Rpb1, domain 3)|interpro:IPR007080(RNA polymerase Rpb1, domain 1)|interpro:IPR007081(RNA polymerase Rpb1, domain 5)|interpro:IPR007083(RNA polymerase Rpb1, domain 4)|interpro:IPR015699(DNA-directed RNA pol I, largest subunit)|interpro:IPR038120|interpro:IPR042102|rcsb pdb:4C2M|rcsb pdb:4C3H|rcsb pdb:4C3I|rcsb pdb:4C3J|rcsb pdb:4YM7|rcsb pdb:5G5L|rcsb pdb:5LMX|rcsb pdb:5M3F|rcsb pdb:5M3M|rcsb pdb:5M5W|rcsb pdb:5M5X|rcsb pdb:5M5Y|rcsb pdb:5M64|rcsb pdb:5N5Y|rcsb pdb:5N5Z|rcsb pdb:5N60|rcsb pdb:5N61|rcsb pdb:5OA1|rcsb pdb:5W5Y|rcsb pdb:5W64|rcsb pdb:5W65|rcsb pdb:5W66|rcsb pdb:6H67|rcsb pdb:6H68|rcsb pdb:6HKO|rcsb pdb:6HLQ|rcsb pdb:6HLR|rcsb pdb:6HLS|ensemblfungi:YOR341W(gene)|ensemblfungi:YOR341W_mRNA(transcript)|go:"GO:0001054"(RNA polymerase I activity)|go:"GO:0003677"(DNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0008270"(zinc ion binding)|dip:DIP-999N|mint:P10964 - crc64:613630F9F41FF77C crc64:DF65A7AA459D5E6D comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:krXuLY5fTE34McW4bnuPqns5Oy4559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P38873 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-24864|uniprotkb:D3DLD4|ensemblfungi:YHR186C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:kog1_yeast(display_long)|uniprotkb:Kontroller of growth protein 1(gene name synonym)|uniprotkb:Local anesthetic-sensitive protein 24(gene name synonym)|uniprotkb:YHR186C(locus name)|uniprotkb:KOG1(gene name)|psi-mi:KOG1(display_short)|uniprotkb:LAS24(gene name synonym)|uniprotkb:H9998.14(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012056.1|sgd:S000001229|mint:P38873|dip:DIP-2639N|ensemblfungi:YHR186C(gene)|ensemblfungi:YHR186C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005886"(plasma membrane)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031929"(TOR signaling)|go:"GO:0031931"(TORC1 complex)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0071230"(cellular response to amino acid stimulus)|go:"GO:0071902"(positive regulation of protein serine/threonine kinase activity)|interpro:IPR000357(HEAT)|interpro:IPR001680(WD40 repeat)|interpro:IPR004083(Regulatory associated protein of TOR)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR029347|interpro:IPR036322|reactome:R-SCE-3371571|reactome:R-SCE-9639288 - crc64:613630F9F41FF77C crc64:B927EE93700176D3 comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:8fDDVTuayLjREVAHrrpxJ9ExeCM559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P15424 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-11308|ensemblfungi:YDR194C|uniprotkb:D6VSH6 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:ms116_yeast(display_long)|uniprotkb:MSS116(gene name)|psi-mi:MSS116(display_short)|uniprotkb:YD9346.05C(orf name)|uniprotkb:YDR194C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 ensemblfungi:YDR194C(gene)|ensemblfungi:YDR194C_mRNA(transcript)|go:"GO:0000372"(Group I intron splicing)|go:"GO:0000373"(Group II intron splicing)|go:"GO:0000963"(mitochondrial RNA processing)|go:"GO:0003723"(RNA binding)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|rcsb pdb:3I5X|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|rcsb pdb:3I5Y|rcsb pdb:3I61|rcsb pdb:3I62|rcsb pdb:3SQW|rcsb pdb:3SQX|rcsb pdb:4DB2|rcsb pdb:4DB4|rcsb pdb:4TYN|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006364"(rRNA processing)|rcsb pdb:4TYW|rcsb pdb:4TYY|rcsb pdb:4TZ0|go:"GO:0006392"(transcription elongation from mitochondrial promoter)|go:"GO:0006397"(mRNA processing)|rcsb pdb:4TZ6|go:"GO:0006417"(regulation of translation)|go:"GO:0033592"(RNA strand annealing activity)|go:"GO:0034337"(RNA folding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|refseq:NP_010480.1|sgd:S000002602|dip:DIP-5368N - crc64:613630F9F41FF77C crc64:DAEECCA4ED0CB2BE comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:J1APSuvs6ka/ROwKuDW61gTWdTc559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P07149 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-6795|uniprotkb:D6VX19|uniprotkb:Q05747|ensemblfungi:YKL182W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:fas1_yeast(display_long)|uniprotkb:YKL182W(locus name)|uniprotkb:FAS1(gene name)|psi-mi:FAS1(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012739.1|sgd:S000001665|mint:P07149|dip:DIP-742N|ensemblfungi:YKL182W(gene)|ensemblfungi:YKL182W_mRNA(transcript)|go:"GO:0004313"([acyl-carrier-protein] S-acetyltransferase activity)|go:"GO:0004314"([acyl-carrier-protein] S-malonyltransferase activity)|go:"GO:0004317"(3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity)|go:"GO:0004318"("enoyl-[acyl-carrier-protein] reductase (NADH) activity")|go:"GO:0004319"("enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity")|go:"GO:0004320"(oleoyl-[acyl-carrier-protein] hydrolase activity)|go:"GO:0004321"(fatty-acyl-CoA synthase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005811"(lipid droplet)|go:"GO:0005829"(cytosol)|go:"GO:0005835"(fatty acid synthase complex)|go:"GO:0008659"("(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity")|go:"GO:0008693"(3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity)|go:"GO:0016295"(myristoyl-[acyl-carrier-protein] hydrolase activity)|go:"GO:0016296"(palmitoyl-[acyl-carrier-protein] hydrolase activity)|go:"GO:0016409"(palmitoyltransferase activity)|go:"GO:0016631"(enoyl-[acyl-carrier-protein] reductase activity)|go:"GO:0019171"(3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity)|go:"GO:0042759"(long-chain fatty acid biosynthetic process)|go:"GO:0047451"(3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity)|interpro:IPR001227(Acyl transferase region)|interpro:IPR002539(MaoC-like dehydratase)|interpro:IPR003965(Fatty acid synthase)|interpro:IPR013565(Region of unknown function DUF1729)|interpro:IPR013785(Aldolase-type TIM barrel)|interpro:IPR014043(Acyl transferase)|interpro:IPR016035(Acyl transferase/acyl hydrolase/lysophospholipase)|interpro:IPR016452(Fatty acid synthase, beta subunit, fungi)|interpro:IPR029069|interpro:IPR032088|interpro:IPR039569|interpro:IPR040883|interpro:IPR041099|rcsb pdb:2PFF|rcsb pdb:2UV8|rcsb pdb:2VKZ|rcsb pdb:3HMJ|rcsb pdb:6JSH|rcsb pdb:6JSI|rcsb pdb:6QL5|rcsb pdb:6QL6|rcsb pdb:6QL7|rcsb pdb:6QL9|rcsb pdb:6TA1|rcsb pdb:6U5T|rcsb pdb:6U5U|rcsb pdb:6WC7 - crc64:613630F9F41FF77C crc64:43AA85A6071D8EAA comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:ccDAdd+J4iGvVqG1vs1bXEJUVqY559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P16861 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-9428|ensemblfungi:YGR240C|uniprotkb:D6VV20 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:pfka1_yeast(display_long)|uniprotkb:PFK1(gene name)|psi-mi:PFK1(display_short)|uniprotkb:YGR240C(locus name)|uniprotkb:G8599(orf name)|uniprotkb:Phosphohexokinase(gene name synonym)|uniprotkb:ATP-dependent 6-phosphofructokinase(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011756.1|sgd:S000003472|ensemblfungi:YGR240C(gene)|ensemblfungi:YGR240C_mRNA(transcript)|go:"GO:0003872"(6-phosphofructokinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005945"(6-phosphofructokinase complex)|go:"GO:0006002"(fructose 6-phosphate metabolic process)|go:"GO:0006096"(glycolytic process)|go:"GO:0016208"(AMP binding)|go:"GO:0030388"(fructose 1,6-bisphosphate metabolic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0048029"(monosaccharide binding)|go:"GO:0051453"(regulation of intracellular pH)|go:"GO:0061621"(canonical glycolysis)|go:"GO:0070095"(fructose-6-phosphate binding)|go:"GO:1902600"(proton transmembrane transport)|interpro:IPR000023(Phosphofructokinase)|interpro:IPR009161(6-phosphofructokinase, eukaryotic type)|interpro:IPR015912(Phosphofructokinase, conserved site)|interpro:IPR022953|interpro:IPR035966|interpro:IPR040712|rcsb pdb:3O8O|reactome:R-SCE-6798695|reactome:R-SCE-70171|mint:P16861|dip:DIP-1505N - crc64:613630F9F41FF77C crc64:995B3DF7C7781B29 comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:mqqXE8Cvcp019pDQsU01zBYUsCc559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:Q04491 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:613630F9F41FF77C crc64:A94388B4B9CB77FE comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:Q03897 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 - crc64:613630F9F41FF77C crc64:D6A137FB0FDE2816 comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P15108 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-8666|ensemblfungi:YMR186W|uniprotkb:D6W010 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:hsc82_yeast(display_long)|uniprotkb:HSC82(gene name)|psi-mi:HSC82(display_short)|uniprotkb:YMR186W(locus name)|uniprotkb:YM8010.16(orf name)|uniprotkb:Heat shock protein Hsp90 constitutive isoform(gene name synonym)|uniprotkb:82 kDa heat shock cognate protein(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 interpro:IPR001404(Heat shock protein Hsp90)|interpro:IPR003594(ATP-binding region, ATPase-like)|interpro:IPR019805|interpro:IPR020568|interpro:IPR020575|interpro:IPR036890|interpro:IPR037196|rcsb pdb:6XLB|rcsb pdb:6XLC|rcsb pdb:6XLD|rcsb pdb:6XLE|rcsb pdb:6XLF|ensemblfungi:YMR186W(gene)|ensemblfungi:YMR186W_mRNA(transcript)|go:"GO:0000492"(box C/D snoRNP assembly)|go:"GO:0000723"(telomere maintenance)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006458"('de novo' protein folding)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034605"(cellular response to heat)|go:"GO:0042026"(protein refolding)|go:"GO:0043248"(proteasome assembly)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050821"(protein stabilization)|go:"GO:0051082"(unfolded protein binding)|rcsb pdb:6XLG|rcsb pdb:6XLH|reactome:R-SCE-1474151|reactome:R-SCE-203615|reactome:R-SCE-3371497|reactome:R-SCE-3371511|reactome:R-SCE-3371571|reactome:R-SCE-5218920|reactome:R-SCE-6798695|reactome:R-SCE-9009391|refseq:NP_013911.1|sgd:S000004798|mint:P15108|dip:DIP-1524N - crc64:613630F9F41FF77C crc64:DBD41524091B1F9B comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:A0Na3L9N4cl7acd9lSGiwKAYK1o559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P41811 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-4898|uniprotkb:D6VU12|ensemblfungi:YGL137W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:copb2_yeast(display_long)|uniprotkb:SEC27(gene name)|psi-mi:SEC27(display_short)|uniprotkb:YGL137W(locus name)|uniprotkb:G2827(orf name)|uniprotkb:Beta'-coat protein(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011378.1|sgd:S000003105|dip:DIP-6468N|mint:P41811|ensemblfungi:YGL137W(gene)|ensemblfungi:YGL137W_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005198"(structural molecule activity)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0030126"(COPI vesicle coat)|go:"GO:0032511"(late endosome to vacuole transport via multivesicular body sorting pathway)|go:"GO:0043130"(ubiquitin binding)|interpro:IPR001680(WD40 repeat)|interpro:IPR006692(Coatomer, WD associated region)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016453(Coatomer, beta' subunit)|interpro:IPR020472|interpro:IPR036322|rcsb pdb:2YNN|rcsb pdb:2YNO|rcsb pdb:2YNP|rcsb pdb:4J73|rcsb pdb:4J77|rcsb pdb:4J78|rcsb pdb:4J79|rcsb pdb:4J81|rcsb pdb:4J82|rcsb pdb:4J84|rcsb pdb:4J86|reactome:R-SCE-6807878|reactome:R-SCE-6811434 - crc64:613630F9F41FF77C crc64:6A5E50BBEB02CB58 comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:I39s3JCseIpdjMGPdNLqEgH8SGk559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P35169 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-19374|uniprotkb:D6VWN7|ensemblfungi:YJR066W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:tor1_yeast(display_long)|uniprotkb:DRR1(gene name synonym)|uniprotkb:TOR1(gene name)|psi-mi:TOR1(display_short)|uniprotkb:YJR066W(locus name)|uniprotkb:J1803(orf name)|uniprotkb:Phosphatidylinositol kinase homolog TOR1(gene name synonym)|uniprotkb:Target of rapamycin kinase 1(gene name synonym)|uniprotkb:Dominant rapamycin resistance protein 1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012600.1|sgd:S000003827|rcsb pdb:2KIT|reactome:R-SCE-1257604|reactome:R-SCE-3371571|reactome:R-SCE-389357|reactome:R-SCE-5218920|reactome:R-SCE-6804757|reactome:R-SCE-9639288|ensemblfungi:YJR066W(gene)|ensemblfungi:YJR066W_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006413"(translational initiation)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0010008"(endosome membrane)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0016242"(negative regulation of macroautophagy)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0031234"(extrinsic component of cytoplasmic side of plasma membrane)|go:"GO:0031505"(fungal-type cell wall organization)|go:"GO:0031929"(TOR signaling)|go:"GO:0031930"(mitochondria-nucleus signaling pathway)|go:"GO:0031931"(TORC1 complex)|go:"GO:0031932"(TORC2 complex)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0034605"(cellular response to heat)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042790"(nucleolar large rRNA transcription by RNA polymerase I)|go:"GO:0044387"(negative regulation of protein kinase activity by regulation of protein phosphorylation)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0090153"(regulation of sphingolipid biosynthetic process)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1905356"(regulation of snRNA pseudouridine synthesis)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR003151(PIK-related kinase, FAT)|interpro:IPR003152(PIK-related kinase, FATC)|interpro:IPR009076(FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR014009(PIK-related kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR024585|interpro:IPR026683|interpro:IPR036738|interpro:IPR036940|rcsb pdb:1W1N|rcsb pdb:2KIO|dip:DIP-917N|mint:P35169 - crc64:613630F9F41FF77C crc64:ACB1781B9963BB1E comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:3aJf92VnNYbaZZj1+i3uk/IvNQI559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P17255 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-20245|uniprotkb:O74301|uniprotkb:Q9Y7W5|uniprotkb:D6VRG7|ensemblfungi:YDL185W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:vata_yeast(display_long)|uniprotkb:VMA1(gene name)|psi-mi:VMA1(display_short)|uniprotkb:CLS8(gene name synonym)|uniprotkb:TFP1(gene name synonym)|uniprotkb:YDL185W(locus name)|uniprotkb:D1286(orf name)|uniprotkb:Vacuolar proton pump subunit A(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_010096.1|sgd:S000002344|mint:P17255|ensemblfungi:YDL185W(gene)|ensemblfungi:YDL185W_mRNA(transcript)|go:"GO:0000221"(vacuolar proton-transporting V-type ATPase, V1 domain)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005524"(ATP binding)|go:"GO:0006314"(intron homing)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0012505"(endomembrane system)|go:"GO:0016539"(intein-mediated protein splicing)|go:"GO:0044267"(cellular protein metabolic process)|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|go:"GO:1902600"(proton transmembrane transport)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR003586(Hedgehog/intein hint domain, C-terminal)|interpro:IPR003587(Hedgehog/intein hint, N-terminal)|interpro:IPR004042(Intein DOD homing endonuclease)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR006141(Intein splicing site)|interpro:IPR006142(Intein)|interpro:IPR007868(Hom-end-associated Hint)|interpro:IPR007869(Homing endonuclease)|interpro:IPR020003|interpro:IPR022878|interpro:IPR023366|interpro:IPR027417|interpro:IPR027434|interpro:IPR030934|interpro:IPR031686|interpro:IPR036121|interpro:IPR036844|rcsb pdb:1DFA|rcsb pdb:1EF0|rcsb pdb:1GPP|rcsb pdb:1JVA|rcsb pdb:1LWS|rcsb pdb:1LWT|rcsb pdb:1UM2|rcsb pdb:1VDE|rcsb pdb:3J9T|rcsb pdb:3J9U|rcsb pdb:3J9V|rcsb pdb:5BW9|rcsb pdb:5D80|rcsb pdb:5VOX|rcsb pdb:5VOY|rcsb pdb:5VOZ|reactome:R-SCE-1222556|reactome:R-SCE-77387|reactome:R-SCE-917977|reactome:R-SCE-9639288|interpro:IPR024034|dip:DIP-2293N - crc64:613630F9F41FF77C crc64:2A4C65D2F59426FD comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:YdmGZxIMX2IXMHC4EO85uOAf1Hg559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:C7GV13 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-9820418 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:rtc1_yeas2(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:C1Q_04279(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:574961(yeas2)|taxid:574961("Saccharomyces cerevisiae (strain JAY291) (Baker's yeast)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR037590|interpro:IPR036322|go:"GO:0005773"(vacuole)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0046872"(metal ion binding) - crc64:613630F9F41FF77C - comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:+AWi8pfXEpTmLn5KAtC2RGz6jMc574961 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P53011 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:613630F9F41FF77C crc64:EAF75B9DE074106B comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P32787 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-10299|ensemblfungi:YJR144W|uniprotkb:D6VWW3 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:mg101_yeast(display_long)|uniprotkb:MGM101(gene name)|psi-mi:MGM101(display_short)|uniprotkb:MGM9(gene name synonym)|uniprotkb:YJR144W(locus name)|uniprotkb:J2181(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012678.1|sgd:S000003905|ensemblfungi:YJR144W(gene)|ensemblfungi:YJR144W_mRNA(transcript)|go:"GO:0000002"(mitochondrial genome maintenance)|go:"GO:0000262"(mitochondrial chromosome)|go:"GO:0000725"(recombinational repair)|go:"GO:0003677"(DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0006281"(DNA repair)|go:"GO:0036297"(interstrand cross-link repair)|go:"GO:0042645"(mitochondrial nucleoid)|interpro:IPR009446(Mitochondrial genome maintenance MGM101)|dip:DIP-5044N - crc64:613630F9F41FF77C crc64:E14C17F2E837D6F0 comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:kuFUiWOdeQ0qj6inlmJdWNnZMfs559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P41810 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-4869|uniprotkb:Q03779|uniprotkb:D6VSL9|ensemblfungi:YDR238C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:copb_yeast(display_long)|uniprotkb:SEC26(gene name)|psi-mi:SEC26(display_short)|uniprotkb:YDR238C(locus name)|uniprotkb:YD8419.05C(orf name)|uniprotkb:Beta-coat protein(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 sgd:S000002646|refseq:NP_010524.3|dip:DIP-6467N|mint:P41810|ensemblfungi:YDR238C(gene)|ensemblfungi:YDR238C_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005198"(structural molecule activity)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0030126"(COPI vesicle coat)|interpro:IPR000225(Armadillo)|interpro:IPR002553(Clathrin/coatomer adaptor, adaptin-like, N-terminal)|interpro:IPR011710(Coatomer, beta subunit, C-terminal)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016460(Coatomer, beta subunit)|interpro:IPR029446|reactome:R-SCE-6798695|reactome:R-SCE-6807878|reactome:R-SCE-6811434 - crc64:613630F9F41FF77C crc64:885420DB026BCFA3 comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:ZfLp1BUmvVuTiXn7/Zbf/3m6VtE559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P05030 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-13501|uniprotkb:D6VUC9|ensemblfungi:YGL008C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:pma1_yeast(display_long)|uniprotkb:PMA1(gene name)|psi-mi:PMA1(display_short)|uniprotkb:Proton pump 1(gene name synonym)|uniprotkb:YGL008C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011507.1|sgd:S000002976|interpro:IPR023214|interpro:IPR023298|interpro:IPR023299|interpro:IPR036412|interpro:IPR044492|ensemblfungi:YGL008C(gene)|ensemblfungi:YGL008C_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0008553"(P-type proton-exporting transporter activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0045121"(membrane raft)|go:"GO:0046872"(metal ion binding)|go:"GO:0051453"(regulation of intracellular pH)|go:"GO:0055085"(transmembrane transport)|go:"GO:0120029"(proton export across plasma membrane)|go:"GO:1902600"(proton transmembrane transport)|go:"GO:1902906"(proteasome storage granule assembly)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001757(ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter)|interpro:IPR004014(ATPase, P-type cation-transporter, N-terminal)|interpro:IPR006534(Plasma-membrane proton-efflux P-type ATPase)|interpro:IPR008250(E1-E2 ATPase-associated region)|interpro:IPR018303|mint:P05030|dip:DIP-2537N - crc64:613630F9F41FF77C crc64:AA1E93966B37E8E1 comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:TMBBGdTUobxIviFblM9X/errjvw559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P22137 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-4766|uniprotkb:D6VTU9|ensemblfungi:YGL206C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:clh_yeast(display_long)|uniprotkb:CHC1(gene name)|psi-mi:CHC1(display_short)|uniprotkb:YGL206C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011309.1|sgd:S000003174|dip:DIP-2279N|mint:P22137|ensemblfungi:YGL206C(gene)|ensemblfungi:YGL206C_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006895"(Golgi to endosome transport)|go:"GO:0006897"(endocytosis)|go:"GO:0006898"(receptor-mediated endocytosis)|go:"GO:0030125"(clathrin vesicle coat)|go:"GO:0030130"(clathrin coat of trans-Golgi network vesicle)|go:"GO:0030132"(clathrin coat of coated pit)|go:"GO:0030479"(actin cortical patch)|go:"GO:0030866"(cortical actin cytoskeleton organization)|go:"GO:0032051"(clathrin light chain binding)|go:"GO:0071439"(clathrin complex)|interpro:IPR000547(Clathrin, heavy chain/VPS, 7-fold repeat)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR015348(Clathrin, heavy chain, linker, core motif)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016025(Clathrin, heavy chain, linker and propeller)|interpro:IPR016341(Clathrin, heavy chain)|interpro:IPR022365|reactome:R-SCE-190873|reactome:R-SCE-196025|reactome:R-SCE-432720|reactome:R-SCE-437239|reactome:R-SCE-8856828|reactome:R-SCE-8866427|reactome:R-SCE-8964038 - crc64:613630F9F41FF77C crc64:622F3083DF2FE315 comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:SAN6H3nVFozXZyTiRLaljMcIKIA559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P19882 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-8586|uniprotkb:D6VYQ6|ensemblfungi:YLR259C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:hsp60_yeast(display_long)|uniprotkb:HSP60(gene name)|psi-mi:HSP60(display_short)|uniprotkb:MIF4(gene name synonym)|uniprotkb:YLR259C(locus name)|uniprotkb:L8479.10(orf name)|uniprotkb:Stimulator factor I 66 kDa component(gene name synonym)|uniprotkb:P66(gene name synonym)|uniprotkb:CPN60(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_013360.1|sgd:S000004249|mint:P19882|dip:DIP-7648N|ensemblfungi:YLR259C(gene)|ensemblfungi:YLR259C_mRNA(transcript)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005829"(cytosol)|go:"GO:0006457"(protein folding)|go:"GO:0006458"('de novo' protein folding)|go:"GO:0008637"(apoptotic mitochondrial changes)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0034514"(mitochondrial unfolded protein response)|go:"GO:0042026"(protein refolding)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0045041"(protein import into mitochondrial intermembrane space)|go:"GO:0050821"(protein stabilization)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051087"(chaperone binding)|go:"GO:0051131"(chaperone-mediated protein complex assembly)|go:"GO:0051604"(protein maturation)|interpro:IPR001844(Chaperonin Cpn60)|interpro:IPR002423(Chaperonin Cpn60/TCP-1)|interpro:IPR018370|interpro:IPR027409|interpro:IPR027410|interpro:IPR027413|reactome:R-SCE-1268020 - crc64:613630F9F41FF77C crc64:279DC3AF5A2B0A3E comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:DoMJw4ScT3htVDJn+ZJD5fIlSOA559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P19097 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-6806|uniprotkb:Q12533|uniprotkb:D6W3D9|ensemblfungi:YPL231W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:fas2_yeast(display_long)|uniprotkb:P1409(orf name)|uniprotkb:YPL231W(locus name)|uniprotkb:FAS2(gene name)|psi-mi:FAS2(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_015093.1|sgd:S000006152|mint:P19097|dip:DIP-960N|interpro:IPR040899|interpro:IPR041550|rcsb pdb:2ML8|rcsb pdb:2PFF|rcsb pdb:2UV8|rcsb pdb:2VKZ|rcsb pdb:2WAS|rcsb pdb:2WAT|rcsb pdb:3HMJ|rcsb pdb:6JSH|rcsb pdb:6JSI|rcsb pdb:6QL5|rcsb pdb:6QL6|rcsb pdb:6QL7|rcsb pdb:6QL9|rcsb pdb:6TA1|rcsb pdb:6WC7|ensemblfungi:YPL231W(gene)|ensemblfungi:YPL231W_mRNA(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004315"(3-oxoacyl-[acyl-carrier-protein] synthase activity)|go:"GO:0004316"("3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity")|go:"GO:0004321"(fatty-acyl-CoA synthase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005835"(fatty acid synthase complex)|go:"GO:0008897"(holo-[acyl-carrier-protein] synthase activity)|go:"GO:0042759"(long-chain fatty acid biosynthetic process)|go:"GO:0102131"(obsolete 3-oxo-glutaryl-[acp] methyl ester reductase activity)|go:"GO:0102132"(obsolete 3-oxo-pimeloyl-[acp] methyl ester reductase activity)|interpro:IPR002582(Holo-[acyl carrier protein] synthase)|interpro:IPR004568(Phosphopantethiene-protein transferase)|interpro:IPR008278(4'-phosphopantetheinyl transferase)|interpro:IPR009081(Acyl carrier protein-like)|interpro:IPR014030(Beta-ketoacyl synthase, N-terminal)|interpro:IPR014031(Beta-ketoacyl synthase, C-terminal)|interpro:IPR016035(Acyl transferase/acyl hydrolase/lysophospholipase)|interpro:IPR016039(Thiolase-like)|interpro:IPR018201|interpro:IPR026025|interpro:IPR036291|interpro:IPR037143 - crc64:613630F9F41FF77C crc64:08B872734CF3AEEA comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:Oo+nwXD8kudgDwQdQrpG+d/GvQY559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P07259 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-14372|uniprotkb:A2TBN0|uniprotkb:Q06HN1|uniprotkb:D6VW55|ensemblfungi:YJL130C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:pyr1_yeast(display_long)|uniprotkb:J0686(orf name)|uniprotkb:YJL130C(locus name)|uniprotkb:URA2(gene name)|psi-mi:URA2(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820602|imex:IM-23164-16 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012405.2|sgd:S000003666|go:"GO:0004070"(aspartate carbamoyltransferase activity)|go:"GO:0004088"("carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity")|go:"GO:0004151"(dihydroorotase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006207"('de novo' pyrimidine nucleobase biosynthetic process)|go:"GO:0006228"(UTP biosynthetic process)|go:"GO:0006541"(glutamine metabolic process)|go:"GO:0006807"(nitrogen compound metabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016597"(amino acid binding)|go:"GO:0019240"(citrulline biosynthetic process)|go:"GO:0044205"('de novo' UMP biosynthetic process)|go:"GO:0045984"(negative regulation of pyrimidine nucleobase metabolic process)|go:"GO:0046872"(metal ion binding)|interpro:IPR002082(Aspartate carbamoyltransferase, eukaryotic)|interpro:IPR002474(Carbamoyl phosphate synthase, small subunit, N-terminal)|interpro:IPR005479(Carbamoyl phosphate synthetase, large subunit, ATP-binding)|interpro:IPR005480(Carbamoyl phosphate synthetase, large subunit, oligomerisation)|interpro:IPR005483(Carbamoyl phosphate synthase, large subunit)|interpro:IPR006130(Aspartate/ornithine carbamoyltransferase)|ensemblfungi:YJL130C(gene)|ensemblfungi:YJL130C_mRNA(transcript)|interpro:IPR006131(Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region)|interpro:IPR006132(Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding)|interpro:IPR006274(Carbamoyl phosphate synthase, small subunit)|interpro:IPR006275(Carbamoyl phosphate synthase, large subunit, glutamine-dependent)|interpro:IPR011607(MGS-like)|interpro:IPR011761(ATP-grasp fold)|interpro:IPR013815(ATP-grasp fold, subdomain 1)|interpro:IPR016185(PreATP-grasp-like fold)|interpro:IPR017926|interpro:IPR029062|interpro:IPR032466|interpro:IPR035686|interpro:IPR036480|interpro:IPR036901|interpro:IPR036914|interpro:IPR036897|reactome:R-SCE-500753|mint:P07259|dip:DIP-7215N - crc64:613630F9F41FF77C crc64:D5A47F4E42A9B1A7 comment:Interaction observed in NPR3-/- cells|figure legend:Figure 1 A, Track 20, Supp. Table 3, Supp. Fig. 2 Track 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/11/13 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:gc7xepqIGcYGssYFCLBvLnTogPE559292 intact-crc:69C25CD09BA7B103|rigid:Tq9mQ3b554AEfX3wWPskzGIGaVc false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:Q04491 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-16529|ensemblfungi:YLR208W|uniprotkb:D6VYK9 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:sec13_yeast(display_long)|uniprotkb:SEC13(gene name)|psi-mi:SEC13(display_short)|uniprotkb:ANU3(gene name synonym)|uniprotkb:YLR208W(locus name)|uniprotkb:L8167.4(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820805|imex:IM-23164-19 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_013309.1|sgd:S000004198|ensemblfungi:YLR208W(gene)|ensemblfungi:YLR208W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0030127"(COPII vesicle coat)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0032527"(protein exit from endoplasmic reticulum)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051028"(mRNA transport)|go:"GO:0051664"(nuclear pore localization)|go:"GO:0071944"(cell periphery)|go:"GO:0090114"(COPII-coated vesicle budding)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037596|rcsb pdb:2PM6|rcsb pdb:2PM7|rcsb pdb:2PM9|rcsb pdb:3IKO|rcsb pdb:3JRO|rcsb pdb:3JRP|rcsb pdb:3MZK|rcsb pdb:3MZL|rcsb pdb:4BZJ|rcsb pdb:4BZK|rcsb pdb:4XMM|rcsb pdb:4XMN|rcsb pdb:6ZG5|rcsb pdb:6ZG6|rcsb pdb:6ZL0|reactome:R-SCE-204005|dip:DIP-1826N|mint:Q04491 - crc64:613630F9F41FF77C crc64:A94388B4B9CB77FE comment:Affinity purifications were performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|figure legend:Supp Fig. 2, track 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:HcczRFhRumq3rcXnLE1Pq2PuyXE559292 intact-crc:CBDB80CD2B6D99FD|rigid:SSSWYiYm76fAVpir+3dSL0G9dVI false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P47170 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-25710|uniprotkb:D6VWV7|ensemblfungi:YJR138W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:iml1_yeast(display_long)|uniprotkb:IML1(gene name)|psi-mi:IML1(display_short)|uniprotkb:Increased minichromosome loss protein 1(gene name synonym)|uniprotkb:SEA1(gene name synonym)|uniprotkb:SEH-associated protein 1(gene name synonym)|uniprotkb:J2129(orf name)|uniprotkb:YJR138W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820805|imex:IM-23164-19 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_012672.1|sgd:S000003899|mint:P47170|dip:DIP-2589N|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR000591(Pleckstrin/ G-protein, interacting region)|interpro:IPR027244|interpro:IPR036388|interpro:IPR036390|ensemblfungi:YJR138W(gene)|ensemblfungi:YJR138W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0010506"(regulation of autophagy)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling) - crc64:613630F9F41FF77C crc64:BB8E73FF5B70CCDF comment:Affinity purifications were performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|figure legend:Supp Fig. 2, track 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:h0cf/P1VAxXdA23g7gmNsd/L3Ag559292 intact-crc:CBDB80CD2B6D99FD|rigid:SSSWYiYm76fAVpir+3dSL0G9dVI false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P39923 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-12212|uniprotkb:Q6B264|uniprotkb:D3DLI8|ensemblfungi:YEL062W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:npr2_yeast(display_long)|uniprotkb:NPR2(gene name)|psi-mi:NPR2(display_short)|uniprotkb:YEL062W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820805|imex:IM-23164-19 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 ensemblfungi:YEL062W(gene)|ensemblfungi:YEL062W_mRNA(transcript)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0015824"(proline transport)|go:"GO:0015840"(urea transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0042493"|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR009348(Nitrogen permease regulator 2)|refseq:NP_010852.4|sgd:S000000788|dip:DIP-1985N - crc64:613630F9F41FF77C crc64:58CA4983B0BAF7BA comment:Affinity purifications were performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|figure legend:Supp Fig. 2, track 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:YP7irpUKVZ19aKcUDQY0kKyjHbU559292 intact-crc:CBDB80CD2B6D99FD|rigid:SSSWYiYm76fAVpir+3dSL0G9dVI false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P53011 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-16940|uniprotkb:D6VU45|ensemblfungi:YGL100W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:seh1_yeast(display_long)|uniprotkb:SEH1(gene name)|psi-mi:SEH1(display_short)|uniprotkb:Nuclear pore protein SEH1(gene name synonym)|uniprotkb:SEC13 homolog 1(gene name synonym)|uniprotkb:YGL100W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820805|imex:IM-23164-19 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011415.1|sgd:S000003068|ensemblfungi:YGL100W(gene)|ensemblfungi:YGL100W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0015031"(protein transport)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031080"(nuclear pore outer ring)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|interpro:IPR037363|interpro:IPR037597|rcsb pdb:3EWE|rcsb pdb:3F3F|rcsb pdb:3F3G|rcsb pdb:3F3P|rcsb pdb:4XMM|rcsb pdb:6X08|mint:P53011|dip:DIP-4193N - crc64:613630F9F41FF77C crc64:EAF75B9DE074106B comment:Affinity purifications were performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|figure legend:Supp Fig. 2, track 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:iDa21gDjE9D0KACE0DdN+kcZP4Y559292 intact-crc:CBDB80CD2B6D99FD|rigid:SSSWYiYm76fAVpir+3dSL0G9dVI false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:C7GV13 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-9820418 psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:rtc1_yeas2(display_long)|uniprotkb:RTC1(gene name)|psi-mi:RTC1(display_short)|uniprotkb:C1Q_04279(orf name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:574961(yeas2)|taxid:574961("Saccharomyces cerevisiae (strain JAY291) (Baker's yeast)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820805|imex:IM-23164-19 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR037590|interpro:IPR036322|go:"GO:0005773"(vacuole)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0046872"(metal ion binding) - crc64:613630F9F41FF77C - comment:Affinity purifications were performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|figure legend:Supp Fig. 2, track 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:+AWi8pfXEpTmLn5KAtC2RGz6jMc574961 intact-crc:CBDB80CD2B6D99FD|rigid:SSSWYiYm76fAVpir+3dSL0G9dVI false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P38742 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-24336|uniprotkb:D3DKU5|ensemblfungi:YHL023C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:npr3_yeast(display_long)|uniprotkb:Required for meiotic nuclear division protein 11(gene name synonym)|uniprotkb:NPR3(gene name)|psi-mi:NPR3(display_short)|uniprotkb:RMD11(gene name synonym)|uniprotkb:YHL023C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820805|imex:IM-23164-19 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_011840.1|sgd:S000001015|dip:DIP-2087N|ensemblfungi:YHL023C(gene)|ensemblfungi:YHL023C_mRNA(transcript)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0032007"(negative regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0038202"(TORC1 signaling)|go:"GO:0051058"(negative regulation of small GTPase mediated signal transduction)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1903833"(positive regulation of cellular response to amino acid starvation)|go:"GO:1904262"(negative regulation of TORC1 signaling)|go:"GO:1990130"(GATOR1 complex)|go:"GO:2000785"(regulation of autophagosome assembly)|interpro:IPR005365(Protein of unknown function UPF0171) - crc64:613630F9F41FF77C crc64:8580F0C58982D51E comment:Affinity purifications were performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|figure legend:Supp Fig. 2, track 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:SggeLz0lEc9k12q/Zoq/AIfdyPE559292 intact-crc:CBDB80CD2B6D99FD|rigid:SSSWYiYm76fAVpir+3dSL0G9dVI false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:Q03897 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-32422|uniprotkb:D6VSB4|ensemblfungi:YDR128W psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:wdr59_yeast(display_long)|uniprotkb:MTC5(gene name)|psi-mi:MTC5(display_short)|uniprotkb:SEA3(gene name synonym)|uniprotkb:SEH-associated protein 3(gene name synonym)|uniprotkb:YDR128W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820805|imex:IM-23164-19 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 sgd:S000002535|refseq:NP_010413.3|dip:DIP-1825N|mint:Q03897|ensemblfungi:YDR128W(gene)|ensemblfungi:YDR128W_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0015031"(protein transport)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR001680(WD40 repeat)|interpro:IPR006575(RWD)|interpro:IPR019775|interpro:IPR036322 - crc64:613630F9F41FF77C crc64:D6A137FB0FDE2816 comment:Affinity purifications were performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|figure legend:Supp Fig. 2, track 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:tjv3c4FnG7qZu69Pz4AzzUpYbYs559292 intact-crc:CBDB80CD2B6D99FD|rigid:SSSWYiYm76fAVpir+3dSL0G9dVI false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:P38164 uniprotkb:P38164 intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C intact:EBI-21365|uniprotkb:D6VPP9|uniprotkb:Q86ZS4|ensemblfungi:YBL104C psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:sea4_yeast(display_long)|uniprotkb:SEA4(gene name)|psi-mi:SEA4(display_short)|uniprotkb:YBL0808(orf name)|uniprotkb:YBL103C-A(orf name)|uniprotkb:YBL104C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Algret et al. (2014) pubmed:25073740|imex:IM-23164 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9820805|imex:IM-23164-19 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 refseq:NP_009446.2|sgd:S000000200|mint:P38164|dip:DIP-4369N|ensemblfungi:YBL104C(gene)|ensemblfungi:YBL104C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0015031"(protein transport)|go:"GO:0032008"(positive regulation of TOR signaling)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0035859"(Seh1-associated complex)|go:"GO:0097042"(extrinsic component of fungal-type vacuolar membrane)|go:"GO:1904263"(positive regulation of TORC1 signaling)|interpro:IPR031488|interpro:IPR036322|interpro:IPR037593 - crc64:613630F9F41FF77C crc64:613630F9F41FF77C comment:Affinity purifications were performed from diploid strains to detect an untagged copy, which can indicate a potential homotypic interaction.|figure legend:Supp Fig. 2, track 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2014/09/17 2014/10/16 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 rogid:EweYqH76b6WnqVP4dt+xrTaie04559292 intact-crc:CBDB80CD2B6D99FD|rigid:SSSWYiYm76fAVpir+3dSL0G9dVI false protein a tag:?-? - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification)