#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q9SB51 uniprotkb:Q9SZJ5 intact:EBI-6589403|ensemblplants:AT4G24560.1|uniprotkb:Q9FPS8 intact:EBI-2292536|uniprotkb:Q940M9|ensemblplants:AT4G37930.1 psi-mi:ubp16_arath(display_long)|uniprotkb:UBP16(gene name)|psi-mi:UBP16(display_short)|uniprotkb:Deubiquitinating enzyme 16(gene name synonym)|uniprotkb:Ubiquitin thioesterase 16(gene name synonym)|uniprotkb:Ubiquitin-specific-processing protease 16(gene name synonym)|uniprotkb:F22K18.240(orf name)|uniprotkb:At4g24560(locus name) psi-mi:glym1_arath(display_long)|uniprotkb:SHM1(gene name)|psi-mi:SHM1(display_short)|uniprotkb:Glycine hydroxymethyltransferase 1(gene name synonym)|uniprotkb:SHMT1(gene name synonym)|uniprotkb:STM(gene name synonym)|uniprotkb:Serine Transhydroxymethyltransferase(gene name synonym)|uniprotkb:Serine methylase 1(gene name synonym)|uniprotkb:F20D10.50(orf name)|uniprotkb:At4g37930(locus name) psi-mi:"MI:0018"(two hybrid) Zhou et al. (2012) imex:IM-18736|pubmed:23232097 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6589401|imex:IM-18736-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR028889|ensemblplants:AT4G24560(gene)|ensemblplants:AT4G24560.1(transcript)|go:"GO:0004197"(cysteine-type endopeptidase activity)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009651"(response to salt stress)|go:"GO:0009908"(flower development)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0046872"(metal ion binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0051301"(cell division)|go:"GO:1901000"(regulation of response to salt stress)|refseq:NP_567705.1|interpro:IPR018200|interpro:IPR001394(Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2)|interpro:IPR002893(Zinc finger, MYND-type)|interpro:IPR038765 refseq:NP_195506.1|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015422(Pyridoxal phosphate-dependent transferase, major region, subdomain 2)|interpro:IPR001085(Glycine hydroxymethyltransferase)|interpro:IPR019798|interpro:IPR039429|ensemblplants:AT4G37930(gene)|ensemblplants:AT4G37930.1(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004372"(glycine hydroxymethyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006544"(glycine metabolic process)|go:"GO:0006563"(L-serine metabolic process)|go:"GO:0006565"(L-serine catabolic process)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0007623"(circadian rhythm)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0008270"(zinc ion binding)|go:"GO:0009409"(response to cold)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009534"(chloroplast thylakoid)|go:"GO:0009570"(chloroplast stroma)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009853"(photorespiration)|go:"GO:0010319"(stromule)|go:"GO:0019264"(glycine biosynthetic process from serine)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0046653"(tetrahydrofolate metabolic process)|go:"GO:0046655"(folic acid metabolic process)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0048046"(apoplast)|go:"GO:0050897"(cobalt ion binding)|go:"GO:0070905"(serine binding) - - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2013/03/27 2014/10/16 rogid:LQMWaOCXvnZNIjm7IHRgxwO9PwU3702 rogid:2PhUX3qBXo4BNjIDHrZvw+aM/bM3702 intact-crc:970D59F535F38FCC|rigid:+sLLXWw3z1xEX5oNVIlxSNbQYw8 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:O23254 uniprotkb:Q9SB51 intact:EBI-6589432|ensemblplants:AT4G13930.1|uniprotkb:Q8LBY1|uniprotkb:Q9FPJ3 intact:EBI-6589403|ensemblplants:AT4G24560.1|uniprotkb:Q9FPS8 psi-mi:glyc4_arath(display_long)|uniprotkb:SHM4(gene name)|psi-mi:SHM4(display_short)|uniprotkb:Glycine hydroxymethyltransferase 4(gene name synonym)|uniprotkb:SHMT4(gene name synonym)|uniprotkb:Serine methylase 4(gene name synonym)|uniprotkb:FCAALL.160(orf name)|uniprotkb:dl3005c(orf name)|uniprotkb:At4g13930(locus name) psi-mi:ubp16_arath(display_long)|uniprotkb:UBP16(gene name)|psi-mi:UBP16(display_short)|uniprotkb:Deubiquitinating enzyme 16(gene name synonym)|uniprotkb:Ubiquitin thioesterase 16(gene name synonym)|uniprotkb:Ubiquitin-specific-processing protease 16(gene name synonym)|uniprotkb:F22K18.240(orf name)|uniprotkb:At4g24560(locus name) psi-mi:"MI:0018"(two hybrid) Zhou et al. (2012) imex:IM-18736|pubmed:23232097 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6589431|imex:IM-18736-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT4G13930(gene)|go:"GO:0006565"(L-serine catabolic process)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0007623"(circadian rhythm)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009506"(plasmodesma)|go:"GO:0019264"(glycine biosynthetic process from serine)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0046653"(tetrahydrofolate metabolic process)|go:"GO:0046655"(folic acid metabolic process)|ensemblplants:AT4G13930.1(transcript)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0050897"(cobalt ion binding)|go:"GO:0070905"(serine binding)|go:"GO:0004372"(glycine hydroxymethyltransferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015422(Pyridoxal phosphate-dependent transferase, major region, subdomain 2)|interpro:IPR001085(Glycine hydroxymethyltransferase)|interpro:IPR019798|refseq:NP_193129.1|interpro:IPR039429|rcsb pdb:6SMR interpro:IPR028889|ensemblplants:AT4G24560(gene)|ensemblplants:AT4G24560.1(transcript)|go:"GO:0004197"(cysteine-type endopeptidase activity)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009651"(response to salt stress)|go:"GO:0009908"(flower development)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0046872"(metal ion binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0051301"(cell division)|go:"GO:1901000"(regulation of response to salt stress)|refseq:NP_567705.1|interpro:IPR018200|interpro:IPR001394(Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2)|interpro:IPR002893(Zinc finger, MYND-type)|interpro:IPR038765 - - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2013/03/27 2014/10/16 rogid:M+EtXiCQaiPQos8oiUtb8NojVWk3702 rogid:LQMWaOCXvnZNIjm7IHRgxwO9PwU3702 intact-crc:177AB53C2DE46A62|rigid:tQs8Hzmbt3Fr1Qjpevz5xRnixA4 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q9SZJ5 uniprotkb:Q9SB51 intact:EBI-2292536|uniprotkb:Q940M9|ensemblplants:AT4G37930.1 intact:EBI-6589403|ensemblplants:AT4G24560.1|uniprotkb:Q9FPS8 psi-mi:glym1_arath(display_long)|uniprotkb:SHM1(gene name)|psi-mi:SHM1(display_short)|uniprotkb:Glycine hydroxymethyltransferase 1(gene name synonym)|uniprotkb:SHMT1(gene name synonym)|uniprotkb:STM(gene name synonym)|uniprotkb:Serine Transhydroxymethyltransferase(gene name synonym)|uniprotkb:Serine methylase 1(gene name synonym)|uniprotkb:F20D10.50(orf name)|uniprotkb:At4g37930(locus name) psi-mi:ubp16_arath(display_long)|uniprotkb:UBP16(gene name)|psi-mi:UBP16(display_short)|uniprotkb:Deubiquitinating enzyme 16(gene name synonym)|uniprotkb:Ubiquitin thioesterase 16(gene name synonym)|uniprotkb:Ubiquitin-specific-processing protease 16(gene name synonym)|uniprotkb:F22K18.240(orf name)|uniprotkb:At4g24560(locus name) psi-mi:"MI:0018"(two hybrid) Zhou et al. (2012) imex:IM-18736|pubmed:23232097 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6589474|imex:IM-18736-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_195506.1|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015422(Pyridoxal phosphate-dependent transferase, major region, subdomain 2)|interpro:IPR001085(Glycine hydroxymethyltransferase)|interpro:IPR019798|interpro:IPR039429|ensemblplants:AT4G37930(gene)|ensemblplants:AT4G37930.1(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004372"(glycine hydroxymethyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006544"(glycine metabolic process)|go:"GO:0006563"(L-serine metabolic process)|go:"GO:0006565"(L-serine catabolic process)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0007623"(circadian rhythm)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0008270"(zinc ion binding)|go:"GO:0009409"(response to cold)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009534"(chloroplast thylakoid)|go:"GO:0009570"(chloroplast stroma)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009853"(photorespiration)|go:"GO:0010319"(stromule)|go:"GO:0019264"(glycine biosynthetic process from serine)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0046653"(tetrahydrofolate metabolic process)|go:"GO:0046655"(folic acid metabolic process)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0048046"(apoplast)|go:"GO:0050897"(cobalt ion binding)|go:"GO:0070905"(serine binding) interpro:IPR028889|ensemblplants:AT4G24560(gene)|ensemblplants:AT4G24560.1(transcript)|go:"GO:0004197"(cysteine-type endopeptidase activity)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009651"(response to salt stress)|go:"GO:0009908"(flower development)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0046872"(metal ion binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0051301"(cell division)|go:"GO:1901000"(regulation of response to salt stress)|refseq:NP_567705.1|interpro:IPR018200|interpro:IPR001394(Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2)|interpro:IPR002893(Zinc finger, MYND-type)|interpro:IPR038765 - - - figure legend:Fig.5B, Supp. 7B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2013/03/27 2014/10/16 rogid:2PhUX3qBXo4BNjIDHrZvw+aM/bM3702 rogid:LQMWaOCXvnZNIjm7IHRgxwO9PwU3702 intact-crc:1829D0B6A9B7DA6D|rigid:+sLLXWw3z1xEX5oNVIlxSNbQYw8 false sufficient binding region:261-517 sufficient binding region:501-1008 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:O23254 uniprotkb:Q9SB51 intact:EBI-6589432|ensemblplants:AT4G13930.1|uniprotkb:Q8LBY1|uniprotkb:Q9FPJ3 intact:EBI-6589403|ensemblplants:AT4G24560.1|uniprotkb:Q9FPS8 psi-mi:glyc4_arath(display_long)|uniprotkb:SHM4(gene name)|psi-mi:SHM4(display_short)|uniprotkb:Glycine hydroxymethyltransferase 4(gene name synonym)|uniprotkb:SHMT4(gene name synonym)|uniprotkb:Serine methylase 4(gene name synonym)|uniprotkb:FCAALL.160(orf name)|uniprotkb:dl3005c(orf name)|uniprotkb:At4g13930(locus name) psi-mi:ubp16_arath(display_long)|uniprotkb:UBP16(gene name)|psi-mi:UBP16(display_short)|uniprotkb:Deubiquitinating enzyme 16(gene name synonym)|uniprotkb:Ubiquitin thioesterase 16(gene name synonym)|uniprotkb:Ubiquitin-specific-processing protease 16(gene name synonym)|uniprotkb:F22K18.240(orf name)|uniprotkb:At4g24560(locus name) psi-mi:"MI:0018"(two hybrid) Zhou et al. (2012) imex:IM-18736|pubmed:23232097 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6589466|imex:IM-18736-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT4G13930(gene)|go:"GO:0006565"(L-serine catabolic process)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0007623"(circadian rhythm)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009506"(plasmodesma)|go:"GO:0019264"(glycine biosynthetic process from serine)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0046653"(tetrahydrofolate metabolic process)|go:"GO:0046655"(folic acid metabolic process)|ensemblplants:AT4G13930.1(transcript)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0050897"(cobalt ion binding)|go:"GO:0070905"(serine binding)|go:"GO:0004372"(glycine hydroxymethyltransferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015422(Pyridoxal phosphate-dependent transferase, major region, subdomain 2)|interpro:IPR001085(Glycine hydroxymethyltransferase)|interpro:IPR019798|refseq:NP_193129.1|interpro:IPR039429|rcsb pdb:6SMR interpro:IPR028889|ensemblplants:AT4G24560(gene)|ensemblplants:AT4G24560.1(transcript)|go:"GO:0004197"(cysteine-type endopeptidase activity)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009651"(response to salt stress)|go:"GO:0009908"(flower development)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0046872"(metal ion binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0051301"(cell division)|go:"GO:1901000"(regulation of response to salt stress)|refseq:NP_567705.1|interpro:IPR018200|interpro:IPR001394(Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2)|interpro:IPR002893(Zinc finger, MYND-type)|interpro:IPR038765 - - - figure legend:Fig.5B, Supp. Fig. 7B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2013/03/27 2014/10/16 rogid:M+EtXiCQaiPQos8oiUtb8NojVWk3702 rogid:LQMWaOCXvnZNIjm7IHRgxwO9PwU3702 intact-crc:D562686524564F63|rigid:tQs8Hzmbt3Fr1Qjpevz5xRnixA4 false sufficient binding region:231-471 sufficient binding region:501-1008 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9SB51 uniprotkb:O23254 intact:EBI-6589403|ensemblplants:AT4G24560.1|uniprotkb:Q9FPS8 intact:EBI-6589432|ensemblplants:AT4G13930.1|uniprotkb:Q8LBY1|uniprotkb:Q9FPJ3 psi-mi:ubp16_arath(display_long)|uniprotkb:UBP16(gene name)|psi-mi:UBP16(display_short)|uniprotkb:Deubiquitinating enzyme 16(gene name synonym)|uniprotkb:Ubiquitin thioesterase 16(gene name synonym)|uniprotkb:Ubiquitin-specific-processing protease 16(gene name synonym)|uniprotkb:F22K18.240(orf name)|uniprotkb:At4g24560(locus name) psi-mi:glyc4_arath(display_long)|uniprotkb:SHM4(gene name)|psi-mi:SHM4(display_short)|uniprotkb:Glycine hydroxymethyltransferase 4(gene name synonym)|uniprotkb:SHMT4(gene name synonym)|uniprotkb:Serine methylase 4(gene name synonym)|uniprotkb:FCAALL.160(orf name)|uniprotkb:dl3005c(orf name)|uniprotkb:At4g13930(locus name) psi-mi:"MI:0096"(pull down) Zhou et al. (2012) imex:IM-18736|pubmed:23232097 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-6589503|imex:IM-18736-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR028889|ensemblplants:AT4G24560(gene)|ensemblplants:AT4G24560.1(transcript)|go:"GO:0004197"(cysteine-type endopeptidase activity)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009651"(response to salt stress)|go:"GO:0009908"(flower development)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0046872"(metal ion binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0051301"(cell division)|go:"GO:1901000"(regulation of response to salt stress)|refseq:NP_567705.1|interpro:IPR018200|interpro:IPR001394(Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2)|interpro:IPR002893(Zinc finger, MYND-type)|interpro:IPR038765 ensemblplants:AT4G13930(gene)|go:"GO:0006565"(L-serine catabolic process)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0007623"(circadian rhythm)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009506"(plasmodesma)|go:"GO:0019264"(glycine biosynthetic process from serine)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0046653"(tetrahydrofolate metabolic process)|go:"GO:0046655"(folic acid metabolic process)|ensemblplants:AT4G13930.1(transcript)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0050897"(cobalt ion binding)|go:"GO:0070905"(serine binding)|go:"GO:0004372"(glycine hydroxymethyltransferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015422(Pyridoxal phosphate-dependent transferase, major region, subdomain 2)|interpro:IPR001085(Glycine hydroxymethyltransferase)|interpro:IPR019798|refseq:NP_193129.1|interpro:IPR039429|rcsb pdb:6SMR - - - figure legend:Fig. 5D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-protoplast)|taxid:3702(Arabidopsis thaliana) - 2013/03/27 2014/10/16 rogid:LQMWaOCXvnZNIjm7IHRgxwO9PwU3702 rogid:M+EtXiCQaiPQos8oiUtb8NojVWk3702 intact-crc:CD58369623899A41|rigid:9N4DIbzjoonXWRZL4OlQek8lA4s false sufficient binding region:501-1008|ha tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9SB51 uniprotkb:Q9SZJ5 intact:EBI-6589403|ensemblplants:AT4G24560.1|uniprotkb:Q9FPS8 intact:EBI-2292536|uniprotkb:Q940M9|ensemblplants:AT4G37930.1 psi-mi:ubp16_arath(display_long)|uniprotkb:UBP16(gene name)|psi-mi:UBP16(display_short)|uniprotkb:Deubiquitinating enzyme 16(gene name synonym)|uniprotkb:Ubiquitin thioesterase 16(gene name synonym)|uniprotkb:Ubiquitin-specific-processing protease 16(gene name synonym)|uniprotkb:F22K18.240(orf name)|uniprotkb:At4g24560(locus name) psi-mi:glym1_arath(display_long)|uniprotkb:SHM1(gene name)|psi-mi:SHM1(display_short)|uniprotkb:Glycine hydroxymethyltransferase 1(gene name synonym)|uniprotkb:SHMT1(gene name synonym)|uniprotkb:STM(gene name synonym)|uniprotkb:Serine Transhydroxymethyltransferase(gene name synonym)|uniprotkb:Serine methylase 1(gene name synonym)|uniprotkb:F20D10.50(orf name)|uniprotkb:At4g37930(locus name) psi-mi:"MI:0096"(pull down) Zhou et al. (2012) imex:IM-18736|pubmed:23232097 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-6589503|imex:IM-18736-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR028889|ensemblplants:AT4G24560(gene)|ensemblplants:AT4G24560.1(transcript)|go:"GO:0004197"(cysteine-type endopeptidase activity)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009651"(response to salt stress)|go:"GO:0009908"(flower development)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016579"(protein deubiquitination)|go:"GO:0046872"(metal ion binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0051301"(cell division)|go:"GO:1901000"(regulation of response to salt stress)|refseq:NP_567705.1|interpro:IPR018200|interpro:IPR001394(Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2)|interpro:IPR002893(Zinc finger, MYND-type)|interpro:IPR038765 refseq:NP_195506.1|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015422(Pyridoxal phosphate-dependent transferase, major region, subdomain 2)|interpro:IPR001085(Glycine hydroxymethyltransferase)|interpro:IPR019798|interpro:IPR039429|ensemblplants:AT4G37930(gene)|ensemblplants:AT4G37930.1(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0004372"(glycine hydroxymethyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006544"(glycine metabolic process)|go:"GO:0006563"(L-serine metabolic process)|go:"GO:0006565"(L-serine catabolic process)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0007623"(circadian rhythm)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0008270"(zinc ion binding)|go:"GO:0009409"(response to cold)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009534"(chloroplast thylakoid)|go:"GO:0009570"(chloroplast stroma)|go:"GO:0009626"(plant-type hypersensitive response)|go:"GO:0009853"(photorespiration)|go:"GO:0010319"(stromule)|go:"GO:0019264"(glycine biosynthetic process from serine)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0035999"(tetrahydrofolate interconversion)|go:"GO:0046653"(tetrahydrofolate metabolic process)|go:"GO:0046655"(folic acid metabolic process)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0048046"(apoplast)|go:"GO:0050897"(cobalt ion binding)|go:"GO:0070905"(serine binding) - - - figure legend:Fig. 5D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-protoplast)|taxid:3702(Arabidopsis thaliana) - 2013/03/27 2014/10/16 rogid:LQMWaOCXvnZNIjm7IHRgxwO9PwU3702 rogid:2PhUX3qBXo4BNjIDHrZvw+aM/bM3702 intact-crc:CD58369623899A41|rigid:9N4DIbzjoonXWRZL4OlQek8lA4s false sufficient binding region:501-1008|ha tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot)