#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B ensemblgenomes:AT5G44160 uniprotkb:Q9LKZ3 intact:EBI-6379152 intact:EBI-398590|uniprotkb:Q93ZS5|uniprotkb:Q9C7C9|uniprotkb:Q9LHH8|ensemblplants:AT3G12280.1 psi-mi:nuc_arath_gene(display_short)|psi-mi:AT5G44160(display_long) psi-mi:rbr1_arath(display_long)|uniprotkb:RBR1(gene name)|psi-mi:RBR1(display_short)|uniprotkb:At3g12280(locus name)|uniprotkb:RBR(gene name synonym)|uniprotkb:F28J15.11(orf name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-6379166|imex:IM-17903-15 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) - refseq:NP_566417.3|dip:DIP-33046N|ensemblplants:AT3G12280(gene)|ensemblplants:AT3G12280.1(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001708"(cell fate specification)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009553"(embryo sac development)|go:"GO:0009555"(pollen development)|go:"GO:0009567"(double fertilization forming a zygote and endosperm)|go:"GO:0010090"(trichome morphogenesis)|go:"GO:0010377"(guard cell fate commitment)|go:"GO:0022619"(generative cell differentiation)|go:"GO:0030154"(cell differentiation)|go:"GO:0032875"(regulation of DNA endoreduplication)|go:"GO:0048229"(gametophyte development)|go:"GO:0048366"(leaf development)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051783"(regulation of nuclear division)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1903866"(palisade mesophyll development)|go:"GO:2000036"(regulation of stem cell population maintenance)|go:"GO:2000134"(negative regulation of G1/S transition of mitotic cell cycle)|go:"GO:2000653"(regulation of genetic imprinting)|interpro:IPR002719(Retinoblastoma-associated protein, B-box)|interpro:IPR002720(Retinoblastoma-associated protein, A-box)|interpro:IPR024599|interpro:IPR028309|interpro:IPR036915 - - - figure legend:Fig. 2G|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2012/09/21 2014/10/16 - rogid:PkoiFW4K7j1E5uKR3x4y52H7weM3702 intact-crc:2CFC9977DF69A99D false sufficient binding region:?-? - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q9M384 uniprotkb:Q9LKZ3 intact:EBI-1250484|uniprotkb:Q96304|ensemblplants:AT3G54220.1 intact:EBI-398590|uniprotkb:Q93ZS5|uniprotkb:Q9C7C9|uniprotkb:Q9LHH8|ensemblplants:AT3G12280.1 psi-mi:scr_arath(display_long)|uniprotkb:SCR(gene name)|psi-mi:SCR(display_short)|uniprotkb:At3g54220(locus name)|uniprotkb:GRAS family protein 20(gene name synonym)|uniprotkb:SGR1(gene name synonym)|uniprotkb:Protein SHOOT GRAVITROPISM 1(gene name synonym)|uniprotkb:F24B22.180(orf name) psi-mi:rbr1_arath(display_long)|uniprotkb:RBR1(gene name)|psi-mi:RBR1(display_short)|uniprotkb:At3g12280(locus name)|uniprotkb:RBR(gene name synonym)|uniprotkb:F28J15.11(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305190|imex:IM-17903-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_190990.1|interpro:IPR005202(GRAS transcription factor)|rcsb pdb:5B3G|rcsb pdb:5B3H|ensemblplants:AT3G54220(gene)|ensemblplants:AT3G54220.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009630"(gravitropism)|go:"GO:0009956"(radial pattern formation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0051457"(maintenance of protein location in nucleus)|go:"GO:0090610"(bundle sheath cell fate specification) refseq:NP_566417.3|dip:DIP-33046N|ensemblplants:AT3G12280(gene)|ensemblplants:AT3G12280.1(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001708"(cell fate specification)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009553"(embryo sac development)|go:"GO:0009555"(pollen development)|go:"GO:0009567"(double fertilization forming a zygote and endosperm)|go:"GO:0010090"(trichome morphogenesis)|go:"GO:0010377"(guard cell fate commitment)|go:"GO:0022619"(generative cell differentiation)|go:"GO:0030154"(cell differentiation)|go:"GO:0032875"(regulation of DNA endoreduplication)|go:"GO:0048229"(gametophyte development)|go:"GO:0048366"(leaf development)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051783"(regulation of nuclear division)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1903866"(palisade mesophyll development)|go:"GO:2000036"(regulation of stem cell population maintenance)|go:"GO:2000134"(negative regulation of G1/S transition of mitotic cell cycle)|go:"GO:2000653"(regulation of genetic imprinting)|interpro:IPR002719(Retinoblastoma-associated protein, B-box)|interpro:IPR002720(Retinoblastoma-associated protein, A-box)|interpro:IPR024599|interpro:IPR028309|interpro:IPR036915 - - - figure legend:Fig. 1C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2012/09/21 2014/10/16 rogid:rXBP3JCAcayG5yjfYp1xY/y6rmc3702 rogid:PkoiFW4K7j1E5uKR3x4y52H7weM3702 intact-crc:5E16CD892B53EA28|rigid:H1hkBXKxX9Xd7NE1ld3Ok+c3ngo false green fluorescent protein tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9LKZ3 uniprotkb:Q9FNY0 intact:EBI-398590|uniprotkb:Q93ZS5|uniprotkb:Q9C7C9|uniprotkb:Q9LHH8|ensemblplants:AT3G12280.1 intact:EBI-1774747|intact:EBI-2131327|intact:EBI-2354819|uniprotkb:Q9C5B5|uniprotkb:Q9FV69|uniprotkb:Q9M454|uniprotkb:Q9SJ49|ensemblplants:AT2G36010.3 psi-mi:rbr1_arath(display_long)|uniprotkb:RBR1(gene name)|psi-mi:RBR1(display_short)|uniprotkb:At3g12280(locus name)|uniprotkb:RBR(gene name synonym)|uniprotkb:F28J15.11(orf name) psi-mi:e2fa_arath(display_long)|uniprotkb:E2FA(gene name)|psi-mi:E2FA(display_short)|uniprotkb:At2g36010(locus name)|uniprotkb:E2F3(gene name synonym)|uniprotkb:E2F4(gene name synonym)|uniprotkb:E2F transcription factor-3(gene name synonym)|uniprotkb:F11F19.8(orf name) psi-mi:"MI:1037"(Split renilla luciferase complementation) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305209|imex:IM-17903-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_566417.3|dip:DIP-33046N|ensemblplants:AT3G12280(gene)|ensemblplants:AT3G12280.1(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001708"(cell fate specification)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009553"(embryo sac development)|go:"GO:0009555"(pollen development)|go:"GO:0009567"(double fertilization forming a zygote and endosperm)|go:"GO:0010090"(trichome morphogenesis)|go:"GO:0010377"(guard cell fate commitment)|go:"GO:0022619"(generative cell differentiation)|go:"GO:0030154"(cell differentiation)|go:"GO:0032875"(regulation of DNA endoreduplication)|go:"GO:0048229"(gametophyte development)|go:"GO:0048366"(leaf development)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051783"(regulation of nuclear division)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1903866"(palisade mesophyll development)|go:"GO:2000036"(regulation of stem cell population maintenance)|go:"GO:2000134"(negative regulation of G1/S transition of mitotic cell cycle)|go:"GO:2000653"(regulation of genetic imprinting)|interpro:IPR002719(Retinoblastoma-associated protein, B-box)|interpro:IPR002720(Retinoblastoma-associated protein, A-box)|interpro:IPR024599|interpro:IPR028309|interpro:IPR036915 refseq:NP_565831.3|refseq:NP_973610.1|refseq:NP_973611.1|dip:DIP-40175N|ensemblplants:AT2G36010(gene)|ensemblplants:AT2G36010.3(transcript)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007049"(cell cycle)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0051446"(positive regulation of meiotic cell cycle)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|interpro:IPR003316("Transcription factor E2F/dimerisation partner (TDP)")|interpro:IPR015633(E2F Family)|interpro:IPR032198|interpro:IPR036388|interpro:IPR036390|interpro:IPR037241 - - - figure legend:Fig. 1F|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-mesophyll)|taxid:3702(Arabidopsis thaliana mesophyll) - 2012/09/21 2014/10/16 rogid:PkoiFW4K7j1E5uKR3x4y52H7weM3702 rogid:pcx/UQUVJQyM6zr2w7fPK4fcP5I3702 intact-crc:8509D57FBEBB6CAD|rigid:lUWsSny/WZDS/MrE/2Ln+S8NTKA false renilla-c:?-? renilla-n:?-? - - psi-mi:"MI:1220"(tag visualisation by luciferase assay) psi-mi:"MI:1220"(tag visualisation by luciferase assay) uniprotkb:Q9M384 uniprotkb:Q9LKZ3 intact:EBI-1250484|uniprotkb:Q96304|ensemblplants:AT3G54220.1 intact:EBI-398590|uniprotkb:Q93ZS5|uniprotkb:Q9C7C9|uniprotkb:Q9LHH8|ensemblplants:AT3G12280.1 psi-mi:scr_arath(display_long)|uniprotkb:SCR(gene name)|psi-mi:SCR(display_short)|uniprotkb:At3g54220(locus name)|uniprotkb:GRAS family protein 20(gene name synonym)|uniprotkb:SGR1(gene name synonym)|uniprotkb:Protein SHOOT GRAVITROPISM 1(gene name synonym)|uniprotkb:F24B22.180(orf name) psi-mi:rbr1_arath(display_long)|uniprotkb:RBR1(gene name)|psi-mi:RBR1(display_short)|uniprotkb:At3g12280(locus name)|uniprotkb:RBR(gene name synonym)|uniprotkb:F28J15.11(orf name) psi-mi:"MI:1037"(Split renilla luciferase complementation) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305205|imex:IM-17903-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_190990.1|interpro:IPR005202(GRAS transcription factor)|rcsb pdb:5B3G|rcsb pdb:5B3H|ensemblplants:AT3G54220(gene)|ensemblplants:AT3G54220.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009630"(gravitropism)|go:"GO:0009956"(radial pattern formation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0051457"(maintenance of protein location in nucleus)|go:"GO:0090610"(bundle sheath cell fate specification) refseq:NP_566417.3|dip:DIP-33046N|ensemblplants:AT3G12280(gene)|ensemblplants:AT3G12280.1(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001708"(cell fate specification)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009553"(embryo sac development)|go:"GO:0009555"(pollen development)|go:"GO:0009567"(double fertilization forming a zygote and endosperm)|go:"GO:0010090"(trichome morphogenesis)|go:"GO:0010377"(guard cell fate commitment)|go:"GO:0022619"(generative cell differentiation)|go:"GO:0030154"(cell differentiation)|go:"GO:0032875"(regulation of DNA endoreduplication)|go:"GO:0048229"(gametophyte development)|go:"GO:0048366"(leaf development)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051783"(regulation of nuclear division)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1903866"(palisade mesophyll development)|go:"GO:2000036"(regulation of stem cell population maintenance)|go:"GO:2000134"(negative regulation of G1/S transition of mitotic cell cycle)|go:"GO:2000653"(regulation of genetic imprinting)|interpro:IPR002719(Retinoblastoma-associated protein, B-box)|interpro:IPR002720(Retinoblastoma-associated protein, A-box)|interpro:IPR024599|interpro:IPR028309|interpro:IPR036915 - - - figure legend:Fig. 1F|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-mesophyll)|taxid:3702(Arabidopsis thaliana mesophyll) - 2012/09/21 2014/10/16 rogid:rXBP3JCAcayG5yjfYp1xY/y6rmc3702 rogid:PkoiFW4K7j1E5uKR3x4y52H7weM3702 intact-crc:07C5050395C0C2A4|rigid:H1hkBXKxX9Xd7NE1ld3Ok+c3ngo false mutation disrupting interaction strength:295-295,299-299|renilla-n:?-? renilla-c:?-? - - psi-mi:"MI:1220"(tag visualisation by luciferase assay) psi-mi:"MI:1220"(tag visualisation by luciferase assay) uniprotkb:Q9SZF7 uniprotkb:Q9M384 intact:EBI-1250472|uniprotkb:Q8RU28|uniprotkb:B3DNN8|ensemblplants:AT4G37650.1 intact:EBI-1250484|uniprotkb:Q96304|ensemblplants:AT3G54220.1 psi-mi:shr_arath(display_long)|uniprotkb:SHR(gene name)|psi-mi:SHR(display_short)|uniprotkb:SGR7(gene name synonym)|uniprotkb:Protein SHOOT GRAVITROPISM 7(gene name synonym)|uniprotkb:At4g37650(locus name)|uniprotkb:F19F18.140(orf name)|uniprotkb:GRAS family protein 26(gene name synonym) psi-mi:scr_arath(display_long)|uniprotkb:SCR(gene name)|psi-mi:SCR(display_short)|uniprotkb:At3g54220(locus name)|uniprotkb:GRAS family protein 20(gene name synonym)|uniprotkb:SGR1(gene name synonym)|uniprotkb:Protein SHOOT GRAVITROPISM 1(gene name synonym)|uniprotkb:F24B22.180(orf name) psi-mi:"MI:1037"(Split renilla luciferase complementation) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305207|imex:IM-17903-9 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_195480.1|interpro:IPR005202(GRAS transcription factor)|rcsb pdb:5B3G|rcsb pdb:5B3H|ensemblplants:AT4G37650(gene)|ensemblplants:AT4G37650.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009956"(radial pattern formation)|go:"GO:0032350"(regulation of hormone metabolic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045930"(negative regulation of mitotic cell cycle)|go:"GO:0048366"(leaf development)|go:"GO:0055037"(recycling endosome)|go:"GO:0055072"(iron ion homeostasis) refseq:NP_190990.1|interpro:IPR005202(GRAS transcription factor)|rcsb pdb:5B3G|rcsb pdb:5B3H|ensemblplants:AT3G54220(gene)|ensemblplants:AT3G54220.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009630"(gravitropism)|go:"GO:0009956"(radial pattern formation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0051457"(maintenance of protein location in nucleus)|go:"GO:0090610"(bundle sheath cell fate specification) - - - figure legend:Fig. 1F|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-mesophyll)|taxid:3702(Arabidopsis thaliana mesophyll) - 2012/09/21 2014/10/16 rogid:EYjT0q/PFpPbWxzOeIxf6AOgqHw3702 rogid:rXBP3JCAcayG5yjfYp1xY/y6rmc3702 intact-crc:7375DF2AEFEC7FA2|rigid:QOWgauE/YkP7E8XKN3mzdaqVvaI false renilla-c:?-? renilla-n:?-? - - psi-mi:"MI:1220"(tag visualisation by luciferase assay) psi-mi:"MI:1220"(tag visualisation by luciferase assay) uniprotkb:Q9LKZ3 uniprotkb:Q9FNY0 intact:EBI-398590|uniprotkb:Q93ZS5|uniprotkb:Q9C7C9|uniprotkb:Q9LHH8|ensemblplants:AT3G12280.1 intact:EBI-1774747|intact:EBI-2131327|intact:EBI-2354819|uniprotkb:Q9C5B5|uniprotkb:Q9FV69|uniprotkb:Q9M454|uniprotkb:Q9SJ49|ensemblplants:AT2G36010.3 psi-mi:rbr1_arath(display_long)|uniprotkb:RBR1(gene name)|psi-mi:RBR1(display_short)|uniprotkb:At3g12280(locus name)|uniprotkb:RBR(gene name synonym)|uniprotkb:F28J15.11(orf name) psi-mi:e2fa_arath(display_long)|uniprotkb:E2FA(gene name)|psi-mi:E2FA(display_short)|uniprotkb:At2g36010(locus name)|uniprotkb:E2F3(gene name synonym)|uniprotkb:E2F4(gene name synonym)|uniprotkb:E2F transcription factor-3(gene name synonym)|uniprotkb:F11F19.8(orf name) psi-mi:"MI:0018"(two hybrid) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305110|imex:IM-17903-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_566417.3|dip:DIP-33046N|ensemblplants:AT3G12280(gene)|ensemblplants:AT3G12280.1(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001708"(cell fate specification)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009553"(embryo sac development)|go:"GO:0009555"(pollen development)|go:"GO:0009567"(double fertilization forming a zygote and endosperm)|go:"GO:0010090"(trichome morphogenesis)|go:"GO:0010377"(guard cell fate commitment)|go:"GO:0022619"(generative cell differentiation)|go:"GO:0030154"(cell differentiation)|go:"GO:0032875"(regulation of DNA endoreduplication)|go:"GO:0048229"(gametophyte development)|go:"GO:0048366"(leaf development)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051783"(regulation of nuclear division)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1903866"(palisade mesophyll development)|go:"GO:2000036"(regulation of stem cell population maintenance)|go:"GO:2000134"(negative regulation of G1/S transition of mitotic cell cycle)|go:"GO:2000653"(regulation of genetic imprinting)|interpro:IPR002719(Retinoblastoma-associated protein, B-box)|interpro:IPR002720(Retinoblastoma-associated protein, A-box)|interpro:IPR024599|interpro:IPR028309|interpro:IPR036915 refseq:NP_565831.3|refseq:NP_973610.1|refseq:NP_973611.1|dip:DIP-40175N|ensemblplants:AT2G36010(gene)|ensemblplants:AT2G36010.3(transcript)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007049"(cell cycle)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0051446"(positive regulation of meiotic cell cycle)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|interpro:IPR003316("Transcription factor E2F/dimerisation partner (TDP)")|interpro:IPR015633(E2F Family)|interpro:IPR032198|interpro:IPR036388|interpro:IPR036390|interpro:IPR037241 - - - figure legend:Fig. 1B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2012/09/21 2014/10/16 rogid:PkoiFW4K7j1E5uKR3x4y52H7weM3702 rogid:pcx/UQUVJQyM6zr2w7fPK4fcP5I3702 intact-crc:8898F6A1D5182F2E|rigid:lUWsSny/WZDS/MrE/2Ln+S8NTKA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9M384 uniprotkb:Q9LKZ3 intact:EBI-1250484|uniprotkb:Q96304|ensemblplants:AT3G54220.1 intact:EBI-398590|uniprotkb:Q93ZS5|uniprotkb:Q9C7C9|uniprotkb:Q9LHH8|ensemblplants:AT3G12280.1 psi-mi:scr_arath(display_long)|uniprotkb:SCR(gene name)|psi-mi:SCR(display_short)|uniprotkb:At3g54220(locus name)|uniprotkb:GRAS family protein 20(gene name synonym)|uniprotkb:SGR1(gene name synonym)|uniprotkb:Protein SHOOT GRAVITROPISM 1(gene name synonym)|uniprotkb:F24B22.180(orf name) psi-mi:rbr1_arath(display_long)|uniprotkb:RBR1(gene name)|psi-mi:RBR1(display_short)|uniprotkb:At3g12280(locus name)|uniprotkb:RBR(gene name synonym)|uniprotkb:F28J15.11(orf name) psi-mi:"MI:0018"(two hybrid) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305118|imex:IM-17903-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_190990.1|interpro:IPR005202(GRAS transcription factor)|rcsb pdb:5B3G|rcsb pdb:5B3H|ensemblplants:AT3G54220(gene)|ensemblplants:AT3G54220.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009630"(gravitropism)|go:"GO:0009956"(radial pattern formation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0051457"(maintenance of protein location in nucleus)|go:"GO:0090610"(bundle sheath cell fate specification) refseq:NP_566417.3|dip:DIP-33046N|ensemblplants:AT3G12280(gene)|ensemblplants:AT3G12280.1(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001708"(cell fate specification)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009553"(embryo sac development)|go:"GO:0009555"(pollen development)|go:"GO:0009567"(double fertilization forming a zygote and endosperm)|go:"GO:0010090"(trichome morphogenesis)|go:"GO:0010377"(guard cell fate commitment)|go:"GO:0022619"(generative cell differentiation)|go:"GO:0030154"(cell differentiation)|go:"GO:0032875"(regulation of DNA endoreduplication)|go:"GO:0048229"(gametophyte development)|go:"GO:0048366"(leaf development)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051783"(regulation of nuclear division)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1903866"(palisade mesophyll development)|go:"GO:2000036"(regulation of stem cell population maintenance)|go:"GO:2000134"(negative regulation of G1/S transition of mitotic cell cycle)|go:"GO:2000653"(regulation of genetic imprinting)|interpro:IPR002719(Retinoblastoma-associated protein, B-box)|interpro:IPR002720(Retinoblastoma-associated protein, A-box)|interpro:IPR024599|interpro:IPR028309|interpro:IPR036915 - - - figure legend:Fig. 1B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2012/09/21 2014/10/16 rogid:rXBP3JCAcayG5yjfYp1xY/y6rmc3702 rogid:PkoiFW4K7j1E5uKR3x4y52H7weM3702 intact-crc:C2C5A0AC2808DEEB|rigid:H1hkBXKxX9Xd7NE1ld3Ok+c3ngo false mutation disrupting interaction strength:295-295,299-299 - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9SZF7 uniprotkb:Q9M384 intact:EBI-1250472|uniprotkb:Q8RU28|uniprotkb:B3DNN8|ensemblplants:AT4G37650.1 intact:EBI-1250484|uniprotkb:Q96304|ensemblplants:AT3G54220.1 psi-mi:shr_arath(display_long)|uniprotkb:SHR(gene name)|psi-mi:SHR(display_short)|uniprotkb:SGR7(gene name synonym)|uniprotkb:Protein SHOOT GRAVITROPISM 7(gene name synonym)|uniprotkb:At4g37650(locus name)|uniprotkb:F19F18.140(orf name)|uniprotkb:GRAS family protein 26(gene name synonym) psi-mi:scr_arath(display_long)|uniprotkb:SCR(gene name)|psi-mi:SCR(display_short)|uniprotkb:At3g54220(locus name)|uniprotkb:GRAS family protein 20(gene name synonym)|uniprotkb:SGR1(gene name synonym)|uniprotkb:Protein SHOOT GRAVITROPISM 1(gene name synonym)|uniprotkb:F24B22.180(orf name) psi-mi:"MI:0018"(two hybrid) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305115|imex:IM-17903-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_195480.1|interpro:IPR005202(GRAS transcription factor)|rcsb pdb:5B3G|rcsb pdb:5B3H|ensemblplants:AT4G37650(gene)|ensemblplants:AT4G37650.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009956"(radial pattern formation)|go:"GO:0032350"(regulation of hormone metabolic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045930"(negative regulation of mitotic cell cycle)|go:"GO:0048366"(leaf development)|go:"GO:0055037"(recycling endosome)|go:"GO:0055072"(iron ion homeostasis) refseq:NP_190990.1|interpro:IPR005202(GRAS transcription factor)|rcsb pdb:5B3G|rcsb pdb:5B3H|ensemblplants:AT3G54220(gene)|ensemblplants:AT3G54220.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009630"(gravitropism)|go:"GO:0009956"(radial pattern formation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0051457"(maintenance of protein location in nucleus)|go:"GO:0090610"(bundle sheath cell fate specification) - - - figure legend:Fig. 1B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2012/09/21 2014/10/16 rogid:EYjT0q/PFpPbWxzOeIxf6AOgqHw3702 rogid:rXBP3JCAcayG5yjfYp1xY/y6rmc3702 intact-crc:2762E9EE33C67104|rigid:QOWgauE/YkP7E8XKN3mzdaqVvaI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9ZR04 uniprotkb:Q9LKZ3 intact:EBI-2131288|ensemblplants:AT4G03270.1 intact:EBI-398590|uniprotkb:Q93ZS5|uniprotkb:Q9C7C9|uniprotkb:Q9LHH8|ensemblplants:AT3G12280.1 psi-mi:ccd61_arath(display_long)|uniprotkb:CYCD6-1(gene name)|psi-mi:CYCD6-1(display_short)|uniprotkb:G1/S-specific cyclin-D6-1(gene name synonym)|uniprotkb:F4C21.20(orf name)|uniprotkb:At4g03270(locus name) psi-mi:rbr1_arath(display_long)|uniprotkb:RBR1(gene name)|psi-mi:RBR1(display_short)|uniprotkb:At3g12280(locus name)|uniprotkb:RBR(gene name synonym)|uniprotkb:F28J15.11(orf name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305249|imex:IM-17903-11 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_192236.1|interpro:IPR013763(Cyclin-related)|interpro:IPR004367(Cyclin, C-terminal)|interpro:IPR006671(Cyclin, N-terminal)|interpro:IPR036915|interpro:IPR039361|ensemblplants:AT4G03270(gene)|ensemblplants:AT4G03270.1(transcript)|go:"GO:0000079"(regulation of cyclin-dependent protein serine/threonine kinase activity)|go:"GO:0000307"(cyclin-dependent protein kinase holoenzyme complex)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016538"(cyclin-dependent protein serine/threonine kinase regulator activity)|go:"GO:0044772"(mitotic cell cycle phase transition)|go:"GO:0051301"(cell division) refseq:NP_566417.3|dip:DIP-33046N|ensemblplants:AT3G12280(gene)|ensemblplants:AT3G12280.1(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001708"(cell fate specification)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009553"(embryo sac development)|go:"GO:0009555"(pollen development)|go:"GO:0009567"(double fertilization forming a zygote and endosperm)|go:"GO:0010090"(trichome morphogenesis)|go:"GO:0010377"(guard cell fate commitment)|go:"GO:0022619"(generative cell differentiation)|go:"GO:0030154"(cell differentiation)|go:"GO:0032875"(regulation of DNA endoreduplication)|go:"GO:0048229"(gametophyte development)|go:"GO:0048366"(leaf development)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051783"(regulation of nuclear division)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1903866"(palisade mesophyll development)|go:"GO:2000036"(regulation of stem cell population maintenance)|go:"GO:2000134"(negative regulation of G1/S transition of mitotic cell cycle)|go:"GO:2000653"(regulation of genetic imprinting)|interpro:IPR002719(Retinoblastoma-associated protein, B-box)|interpro:IPR002720(Retinoblastoma-associated protein, A-box)|interpro:IPR024599|interpro:IPR028309|interpro:IPR036915 - - - figure legend:Fig. 3A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-mesophyll)|taxid:3702(Arabidopsis thaliana mesophyll) - 2012/09/21 2014/10/16 rogid:ia06NFo1PmbwENPcGcKNjeHRFAo3702 rogid:PkoiFW4K7j1E5uKR3x4y52H7weM3702 intact-crc:A1AAC74B46EE2A6C|rigid:idlYhpKgASMAC4jmTG1e466OCnY false nYFP:?-? cYFP:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9FNY0 uniprotkb:Q9LKZ3 intact:EBI-1774747|intact:EBI-2131327|intact:EBI-2354819|uniprotkb:Q9C5B5|uniprotkb:Q9FV69|uniprotkb:Q9M454|uniprotkb:Q9SJ49|ensemblplants:AT2G36010.3 intact:EBI-398590|uniprotkb:Q93ZS5|uniprotkb:Q9C7C9|uniprotkb:Q9LHH8|ensemblplants:AT3G12280.1 psi-mi:e2fa_arath(display_long)|uniprotkb:E2FA(gene name)|psi-mi:E2FA(display_short)|uniprotkb:At2g36010(locus name)|uniprotkb:E2F3(gene name synonym)|uniprotkb:E2F4(gene name synonym)|uniprotkb:E2F transcription factor-3(gene name synonym)|uniprotkb:F11F19.8(orf name) psi-mi:rbr1_arath(display_long)|uniprotkb:RBR1(gene name)|psi-mi:RBR1(display_short)|uniprotkb:At3g12280(locus name)|uniprotkb:RBR(gene name synonym)|uniprotkb:F28J15.11(orf name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305166|imex:IM-17903-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_565831.3|refseq:NP_973610.1|refseq:NP_973611.1|dip:DIP-40175N|ensemblplants:AT2G36010(gene)|ensemblplants:AT2G36010.3(transcript)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007049"(cell cycle)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0051446"(positive regulation of meiotic cell cycle)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|interpro:IPR003316("Transcription factor E2F/dimerisation partner (TDP)")|interpro:IPR015633(E2F Family)|interpro:IPR032198|interpro:IPR036388|interpro:IPR036390|interpro:IPR037241 refseq:NP_566417.3|dip:DIP-33046N|ensemblplants:AT3G12280(gene)|ensemblplants:AT3G12280.1(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001708"(cell fate specification)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009553"(embryo sac development)|go:"GO:0009555"(pollen development)|go:"GO:0009567"(double fertilization forming a zygote and endosperm)|go:"GO:0010090"(trichome morphogenesis)|go:"GO:0010377"(guard cell fate commitment)|go:"GO:0022619"(generative cell differentiation)|go:"GO:0030154"(cell differentiation)|go:"GO:0032875"(regulation of DNA endoreduplication)|go:"GO:0048229"(gametophyte development)|go:"GO:0048366"(leaf development)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051783"(regulation of nuclear division)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1903866"(palisade mesophyll development)|go:"GO:2000036"(regulation of stem cell population maintenance)|go:"GO:2000134"(negative regulation of G1/S transition of mitotic cell cycle)|go:"GO:2000653"(regulation of genetic imprinting)|interpro:IPR002719(Retinoblastoma-associated protein, B-box)|interpro:IPR002720(Retinoblastoma-associated protein, A-box)|interpro:IPR024599|interpro:IPR028309|interpro:IPR036915 - - - figure legend:Fig. 1C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-mesophyll)|taxid:3702(Arabidopsis thaliana mesophyll) - 2012/09/21 2014/10/16 rogid:pcx/UQUVJQyM6zr2w7fPK4fcP5I3702 rogid:PkoiFW4K7j1E5uKR3x4y52H7weM3702 intact-crc:59F8BF7FF306B83B|rigid:lUWsSny/WZDS/MrE/2Ln+S8NTKA false nYFP:?-? cYFP:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9FV70 uniprotkb:Q9LKZ3 intact:EBI-2131346|uniprotkb:Q94LY0|uniprotkb:Q9FZG7|ensemblplants:AT1G47870.1 intact:EBI-398590|uniprotkb:Q93ZS5|uniprotkb:Q9C7C9|uniprotkb:Q9LHH8|ensemblplants:AT3G12280.1 psi-mi:e2fc_arath(display_long)|uniprotkb:E2FC(gene name)|psi-mi:E2FC(display_short)|uniprotkb:At1g47870(locus name)|uniprotkb:E2F2(gene name synonym)|uniprotkb:E2F transcription factor-2(gene name synonym)|uniprotkb:T2E6.2(orf name) psi-mi:rbr1_arath(display_long)|uniprotkb:RBR1(gene name)|psi-mi:RBR1(display_short)|uniprotkb:At3g12280(locus name)|uniprotkb:RBR(gene name synonym)|uniprotkb:F28J15.11(orf name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305262|imex:IM-17903-12 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_175222.1|interpro:IPR015633(E2F Family)|interpro:IPR003316("Transcription factor E2F/dimerisation partner (TDP)")|interpro:IPR032198|interpro:IPR036388|interpro:IPR036390|interpro:IPR037241|ensemblplants:AT1G47870(gene)|ensemblplants:AT1G47870.1(transcript)|go:"GO:0000902"(cell morphogenesis)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0010767"(regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage)|go:"GO:0019760"(glucosinolate metabolic process)|go:"GO:0042023"(DNA endoreduplication)|go:"GO:0043068"(positive regulation of programmed cell death)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051301"(cell division)|go:"GO:0051782"(negative regulation of cell division)|go:"GO:0090575"(RNA polymerase II transcription regulator complex) refseq:NP_566417.3|dip:DIP-33046N|ensemblplants:AT3G12280(gene)|ensemblplants:AT3G12280.1(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001708"(cell fate specification)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009553"(embryo sac development)|go:"GO:0009555"(pollen development)|go:"GO:0009567"(double fertilization forming a zygote and endosperm)|go:"GO:0010090"(trichome morphogenesis)|go:"GO:0010377"(guard cell fate commitment)|go:"GO:0022619"(generative cell differentiation)|go:"GO:0030154"(cell differentiation)|go:"GO:0032875"(regulation of DNA endoreduplication)|go:"GO:0048229"(gametophyte development)|go:"GO:0048366"(leaf development)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051783"(regulation of nuclear division)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1903866"(palisade mesophyll development)|go:"GO:2000036"(regulation of stem cell population maintenance)|go:"GO:2000134"(negative regulation of G1/S transition of mitotic cell cycle)|go:"GO:2000653"(regulation of genetic imprinting)|interpro:IPR002719(Retinoblastoma-associated protein, B-box)|interpro:IPR002720(Retinoblastoma-associated protein, A-box)|interpro:IPR024599|interpro:IPR028309|interpro:IPR036915 - - - figure legend:Fig. 3B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-mesophyll)|taxid:3702(Arabidopsis thaliana mesophyll) - 2012/09/21 2014/10/16 rogid:AoMHK0wZPMcGq2yW1DnK/7rMECk3702 rogid:PkoiFW4K7j1E5uKR3x4y52H7weM3702 intact-crc:91B944D1F5CE667D|rigid:UupSUYYKUI4Py3UMRJ8o8ujH0gw false nYFP:?-? cYFP:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9M384 uniprotkb:Q9LKZ3 intact:EBI-1250484|uniprotkb:Q96304|ensemblplants:AT3G54220.1 intact:EBI-398590|uniprotkb:Q93ZS5|uniprotkb:Q9C7C9|uniprotkb:Q9LHH8|ensemblplants:AT3G12280.1 psi-mi:scr_arath(display_long)|uniprotkb:SCR(gene name)|psi-mi:SCR(display_short)|uniprotkb:At3g54220(locus name)|uniprotkb:GRAS family protein 20(gene name synonym)|uniprotkb:SGR1(gene name synonym)|uniprotkb:Protein SHOOT GRAVITROPISM 1(gene name synonym)|uniprotkb:F24B22.180(orf name) psi-mi:rbr1_arath(display_long)|uniprotkb:RBR1(gene name)|psi-mi:RBR1(display_short)|uniprotkb:At3g12280(locus name)|uniprotkb:RBR(gene name synonym)|uniprotkb:F28J15.11(orf name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305157|imex:IM-17903-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_190990.1|interpro:IPR005202(GRAS transcription factor)|rcsb pdb:5B3G|rcsb pdb:5B3H|ensemblplants:AT3G54220(gene)|ensemblplants:AT3G54220.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009630"(gravitropism)|go:"GO:0009956"(radial pattern formation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0051457"(maintenance of protein location in nucleus)|go:"GO:0090610"(bundle sheath cell fate specification) refseq:NP_566417.3|dip:DIP-33046N|ensemblplants:AT3G12280(gene)|ensemblplants:AT3G12280.1(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001708"(cell fate specification)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009553"(embryo sac development)|go:"GO:0009555"(pollen development)|go:"GO:0009567"(double fertilization forming a zygote and endosperm)|go:"GO:0010090"(trichome morphogenesis)|go:"GO:0010377"(guard cell fate commitment)|go:"GO:0022619"(generative cell differentiation)|go:"GO:0030154"(cell differentiation)|go:"GO:0032875"(regulation of DNA endoreduplication)|go:"GO:0048229"(gametophyte development)|go:"GO:0048366"(leaf development)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051783"(regulation of nuclear division)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1903866"(palisade mesophyll development)|go:"GO:2000036"(regulation of stem cell population maintenance)|go:"GO:2000134"(negative regulation of G1/S transition of mitotic cell cycle)|go:"GO:2000653"(regulation of genetic imprinting)|interpro:IPR002719(Retinoblastoma-associated protein, B-box)|interpro:IPR002720(Retinoblastoma-associated protein, A-box)|interpro:IPR024599|interpro:IPR028309|interpro:IPR036915 - - - figure legend:Fig. 1C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-mesophyll)|taxid:3702(Arabidopsis thaliana mesophyll) - 2012/09/21 2014/10/16 rogid:rXBP3JCAcayG5yjfYp1xY/y6rmc3702 rogid:PkoiFW4K7j1E5uKR3x4y52H7weM3702 intact-crc:707524F8C7AA071F|rigid:H1hkBXKxX9Xd7NE1ld3Ok+c3ngo false nYFP:?-? cYFP:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9M384 uniprotkb:Q9SZF7 intact:EBI-1250484|uniprotkb:Q96304|ensemblplants:AT3G54220.1 intact:EBI-1250472|uniprotkb:Q8RU28|uniprotkb:B3DNN8|ensemblplants:AT4G37650.1 psi-mi:scr_arath(display_long)|uniprotkb:SCR(gene name)|psi-mi:SCR(display_short)|uniprotkb:At3g54220(locus name)|uniprotkb:GRAS family protein 20(gene name synonym)|uniprotkb:SGR1(gene name synonym)|uniprotkb:Protein SHOOT GRAVITROPISM 1(gene name synonym)|uniprotkb:F24B22.180(orf name) psi-mi:shr_arath(display_long)|uniprotkb:SHR(gene name)|psi-mi:SHR(display_short)|uniprotkb:SGR7(gene name synonym)|uniprotkb:Protein SHOOT GRAVITROPISM 7(gene name synonym)|uniprotkb:At4g37650(locus name)|uniprotkb:F19F18.140(orf name)|uniprotkb:GRAS family protein 26(gene name synonym) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305174|imex:IM-17903-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_190990.1|interpro:IPR005202(GRAS transcription factor)|rcsb pdb:5B3G|rcsb pdb:5B3H|ensemblplants:AT3G54220(gene)|ensemblplants:AT3G54220.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009630"(gravitropism)|go:"GO:0009956"(radial pattern formation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0051457"(maintenance of protein location in nucleus)|go:"GO:0090610"(bundle sheath cell fate specification) refseq:NP_195480.1|interpro:IPR005202(GRAS transcription factor)|rcsb pdb:5B3G|rcsb pdb:5B3H|ensemblplants:AT4G37650(gene)|ensemblplants:AT4G37650.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009956"(radial pattern formation)|go:"GO:0032350"(regulation of hormone metabolic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045930"(negative regulation of mitotic cell cycle)|go:"GO:0048366"(leaf development)|go:"GO:0055037"(recycling endosome)|go:"GO:0055072"(iron ion homeostasis) - - - figure legend:Fig. 1C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-mesophyll)|taxid:3702(Arabidopsis thaliana mesophyll) - 2012/09/21 2014/10/16 rogid:rXBP3JCAcayG5yjfYp1xY/y6rmc3702 rogid:EYjT0q/PFpPbWxzOeIxf6AOgqHw3702 intact-crc:AF84B52AA251AB34|rigid:QOWgauE/YkP7E8XKN3mzdaqVvaI false nYFP:?-? cYFP:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9SZF7 uniprotkb:Q9M384 intact:EBI-1250472|uniprotkb:Q8RU28|uniprotkb:B3DNN8|ensemblplants:AT4G37650.1 intact:EBI-1250484|uniprotkb:Q96304|ensemblplants:AT3G54220.1 psi-mi:shr_arath(display_long)|uniprotkb:SHR(gene name)|psi-mi:SHR(display_short)|uniprotkb:SGR7(gene name synonym)|uniprotkb:Protein SHOOT GRAVITROPISM 7(gene name synonym)|uniprotkb:At4g37650(locus name)|uniprotkb:F19F18.140(orf name)|uniprotkb:GRAS family protein 26(gene name synonym) psi-mi:scr_arath(display_long)|uniprotkb:SCR(gene name)|psi-mi:SCR(display_short)|uniprotkb:At3g54220(locus name)|uniprotkb:GRAS family protein 20(gene name synonym)|uniprotkb:SGR1(gene name synonym)|uniprotkb:Protein SHOOT GRAVITROPISM 1(gene name synonym)|uniprotkb:F24B22.180(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305704|imex:IM-17903-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_195480.1|interpro:IPR005202(GRAS transcription factor)|rcsb pdb:5B3G|rcsb pdb:5B3H|ensemblplants:AT4G37650(gene)|ensemblplants:AT4G37650.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009956"(radial pattern formation)|go:"GO:0032350"(regulation of hormone metabolic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045930"(negative regulation of mitotic cell cycle)|go:"GO:0048366"(leaf development)|go:"GO:0055037"(recycling endosome)|go:"GO:0055072"(iron ion homeostasis) refseq:NP_190990.1|interpro:IPR005202(GRAS transcription factor)|rcsb pdb:5B3G|rcsb pdb:5B3H|ensemblplants:AT3G54220(gene)|ensemblplants:AT3G54220.1(transcript)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009630"(gravitropism)|go:"GO:0009956"(radial pattern formation)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0051457"(maintenance of protein location in nucleus)|go:"GO:0090610"(bundle sheath cell fate specification) - - - figure legend:Fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-protoplast)|taxid:3702(Arabidopsis thaliana) - 2012/09/21 2014/10/16 rogid:EYjT0q/PFpPbWxzOeIxf6AOgqHw3702 rogid:rXBP3JCAcayG5yjfYp1xY/y6rmc3702 intact-crc:2167F119427A67C0|rigid:cx+KaXbsZagAK8hIqRQEtiRaa9A false green fluorescent protein tag:?-? ha tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q9SZF7 uniprotkb:Q9LKZ3 intact:EBI-1250472|uniprotkb:Q8RU28|uniprotkb:B3DNN8|ensemblplants:AT4G37650.1 intact:EBI-398590|uniprotkb:Q93ZS5|uniprotkb:Q9C7C9|uniprotkb:Q9LHH8|ensemblplants:AT3G12280.1 psi-mi:shr_arath(display_long)|uniprotkb:SHR(gene name)|psi-mi:SHR(display_short)|uniprotkb:SGR7(gene name synonym)|uniprotkb:Protein SHOOT GRAVITROPISM 7(gene name synonym)|uniprotkb:At4g37650(locus name)|uniprotkb:F19F18.140(orf name)|uniprotkb:GRAS family protein 26(gene name synonym) psi-mi:rbr1_arath(display_long)|uniprotkb:RBR1(gene name)|psi-mi:RBR1(display_short)|uniprotkb:At3g12280(locus name)|uniprotkb:RBR(gene name synonym)|uniprotkb:F28J15.11(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305704|imex:IM-17903-14 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_195480.1|interpro:IPR005202(GRAS transcription factor)|rcsb pdb:5B3G|rcsb pdb:5B3H|ensemblplants:AT4G37650(gene)|ensemblplants:AT4G37650.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009956"(radial pattern formation)|go:"GO:0032350"(regulation of hormone metabolic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045930"(negative regulation of mitotic cell cycle)|go:"GO:0048366"(leaf development)|go:"GO:0055037"(recycling endosome)|go:"GO:0055072"(iron ion homeostasis) refseq:NP_566417.3|dip:DIP-33046N|ensemblplants:AT3G12280(gene)|ensemblplants:AT3G12280.1(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001708"(cell fate specification)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006349"(regulation of gene expression by genomic imprinting)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0009553"(embryo sac development)|go:"GO:0009555"(pollen development)|go:"GO:0009567"(double fertilization forming a zygote and endosperm)|go:"GO:0010090"(trichome morphogenesis)|go:"GO:0010377"(guard cell fate commitment)|go:"GO:0022619"(generative cell differentiation)|go:"GO:0030154"(cell differentiation)|go:"GO:0032875"(regulation of DNA endoreduplication)|go:"GO:0048229"(gametophyte development)|go:"GO:0048366"(leaf development)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051783"(regulation of nuclear division)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:1903866"(palisade mesophyll development)|go:"GO:2000036"(regulation of stem cell population maintenance)|go:"GO:2000134"(negative regulation of G1/S transition of mitotic cell cycle)|go:"GO:2000653"(regulation of genetic imprinting)|interpro:IPR002719(Retinoblastoma-associated protein, B-box)|interpro:IPR002720(Retinoblastoma-associated protein, A-box)|interpro:IPR024599|interpro:IPR028309|interpro:IPR036915 - - - figure legend:Fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-protoplast)|taxid:3702(Arabidopsis thaliana) - 2012/09/21 2014/10/16 rogid:EYjT0q/PFpPbWxzOeIxf6AOgqHw3702 rogid:PkoiFW4K7j1E5uKR3x4y52H7weM3702 intact-crc:2167F119427A67C0|rigid:cx+KaXbsZagAK8hIqRQEtiRaa9A false green fluorescent protein tag:?-? myc tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q9ZR04 uniprotkb:P25859 intact:EBI-2131288|ensemblplants:AT4G03270.1 intact:EBI-1253311|uniprotkb:Q147L4|ensemblplants:AT3G54180.1 psi-mi:ccd61_arath(display_long)|uniprotkb:CYCD6-1(gene name)|psi-mi:CYCD6-1(display_short)|uniprotkb:G1/S-specific cyclin-D6-1(gene name synonym)|uniprotkb:F4C21.20(orf name)|uniprotkb:At4g03270(locus name) psi-mi:ckb11_arath(display_long)|uniprotkb:CDKB1-1(gene name)|psi-mi:CDKB1-1(display_short)|uniprotkb:At3g54180(locus name)|uniprotkb:F24B22.140(orf name)|uniprotkb:CDC2B(gene name synonym)|uniprotkb:Cell division control protein 2 homolog B(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Cruz-Ramirez et al. (2012) imex:IM-17903|pubmed:22921914 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6305696|imex:IM-17903-13 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_192236.1|interpro:IPR013763(Cyclin-related)|interpro:IPR004367(Cyclin, C-terminal)|interpro:IPR006671(Cyclin, N-terminal)|interpro:IPR036915|interpro:IPR039361|ensemblplants:AT4G03270(gene)|ensemblplants:AT4G03270.1(transcript)|go:"GO:0000079"(regulation of cyclin-dependent protein serine/threonine kinase activity)|go:"GO:0000307"(cyclin-dependent protein kinase holoenzyme complex)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016538"(cyclin-dependent protein serine/threonine kinase regulator activity)|go:"GO:0044772"(mitotic cell cycle phase transition)|go:"GO:0051301"(cell division) refseq:NP_190986.1|interpro:IPR011009(Protein kinase-like)|interpro:IPR000719(Protein kinase, core)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0030332"(cyclin binding)|go:"GO:0032875"(regulation of DNA endoreduplication)|go:"GO:0042023"(DNA endoreduplication)|go:"GO:0048825"(cotyledon development)|go:"GO:0051301"(cell division)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1902806"(regulation of cell cycle G1/S phase transition)|go:"GO:2000037"(regulation of stomatal complex patterning)|ensemblplants:AT3G54180(gene)|ensemblplants:AT3G54180.1(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000307"(cyclin-dependent protein kinase holoenzyme complex)|go:"GO:0004693"(cyclin-dependent protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008353"(RNA polymerase II CTD heptapeptide repeat kinase activity)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0010376"(stomatal complex formation)|go:"GO:0010389"(regulation of G2/M transition of mitotic cell cycle)|go:"GO:0010444"(guard mother cell differentiation) - - - figure legend:Fig. 3C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-protoplast)|taxid:3702(Arabidopsis thaliana) - 2012/09/21 2014/10/16 rogid:ia06NFo1PmbwENPcGcKNjeHRFAo3702 rogid:JWptOA0cTHhGhwxS20usuPQ2vvA3702 intact-crc:5F7FC90F9E9568E4|rigid:QqkNiB3Wn7vb2/HoTIL4X9dMyLs false ha tag:?-? myc tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot)