#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P0A903 uniprotkb:P0AC02 intact:EBI-1129043|uniprotkb:P21167|uniprotkb:P76564|ensemblbacteria:AAC75530|ensemblbacteria:BAA16354 intact:EBI-1128087|uniprotkb:P77146|uniprotkb:Q47344|ensemblbacteria:AAC75644|ensemblbacteria:BAA16480 psi-mi:bamc_ecoli(display_long)|uniprotkb:bamC(gene name)|psi-mi:bamC(display_short)|uniprotkb:dapX(gene name synonym)|uniprotkb:nlpB(gene name synonym)|uniprotkb:JW2462(locus name)|uniprotkb:b2477(locus name) psi-mi:bamd_ecoli(display_long)|uniprotkb:bamD(gene name)|psi-mi:bamD(display_short)|uniprotkb:yfiO(gene name synonym)|uniprotkb:JW2577(locus name)|uniprotkb:b2595(locus name) psi-mi:"MI:0071"(molecular sieving) Kim et al. (2011) pubmed:21937441|imex:IM-17388 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6192431|imex:IM-17388-1 - - psi-mi:"MI:0500"(biological role) psi-mi:"MI:0500"(biological role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_416972.4|refseq:WP_001297320.1|ensemblbacteria:AAC75530(transcript)|ensemblbacteria:b2477(gene)|ensemblbacteria:BAA16354(gene)|ensemblbacteria:BAA16354(transcript)|go:"GO:0009986"(cell surface)|go:"GO:0042802"(identical protein binding)|go:"GO:0043165"(Gram-negative-bacterium-type cell outer membrane assembly)|go:"GO:0051205"(protein insertion into membrane)|go:"GO:1990063"(Bam protein complex)|interpro:IPR010653(NlpBDapX lipoprotein)|interpro:IPR014524(Lipoprotein, NlpB type)|interpro:IPR042268|rcsb pdb:2LAE|rcsb pdb:2LAF|rcsb pdb:2YH5|rcsb pdb:2YH6|rcsb pdb:3SNS|rcsb pdb:3TGO|rcsb pdb:5AYW|rcsb pdb:5D0O|rcsb pdb:5D0Q|rcsb pdb:5EKQ|rcsb pdb:5LJO|rcsb pdb:6LYQ|rcsb pdb:6LYR|rcsb pdb:6LYS|rcsb pdb:6LYU|rcsb pdb:6SN9|rcsb pdb:6SOB|rcsb pdb:6SOJ|rcsb pdb:6V05|rcsb pdb:7BNQ|rcsb pdb:7NBX|rcsb pdb:7NCS|rcsb pdb:7ND0|rcsb pdb:7NRI|dip:DIP-39898N refseq:NP_417086.1|refseq:WP_000197686.1|ensemblbacteria:AAC75644(transcript)|ensemblbacteria:b2595(gene)|ensemblbacteria:BAA16480(gene)|ensemblbacteria:BAA16480(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0043165"(Gram-negative-bacterium-type cell outer membrane assembly)|go:"GO:0051205"(protein insertion into membrane)|go:"GO:1990063"(Bam protein complex)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR017689(Outer membrane assembly lipoprotein YfiO)|interpro:IPR039565|rcsb pdb:2YHC|rcsb pdb:3Q5M|rcsb pdb:3TGO|rcsb pdb:5AYW|rcsb pdb:5D0O|rcsb pdb:5D0Q|rcsb pdb:5EKQ|rcsb pdb:5LJO|rcsb pdb:6LYQ|rcsb pdb:6LYR|rcsb pdb:6LYS|rcsb pdb:6LYU|rcsb pdb:6SN9|rcsb pdb:6SOB|rcsb pdb:6SOJ|rcsb pdb:6V05|rcsb pdb:7BNQ|rcsb pdb:7NBX|rcsb pdb:7NCS|rcsb pdb:7ND0|rcsb pdb:7NRI|dip:DIP-51120N - - - figure legend:FIGURE 1. Formation of the BamCD complex.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2012/07/11 2014/10/16 rogid:uKNUHaYcGu0iXXBHURmL+BBTe7k83333 rogid:2Hsq+7DzvFcudrc+kYWfz/s/OR483333 intact-crc:A8CD664638F656FE|rigid:QLylzjK3qpMbReRIjTgpO+LECMs false his tag:n-n|sufficient binding region:26-93 his tag:n-n|sufficient binding region:26-245 - - psi-mi:"MI:0818"(molecular weight estimation by coomasie staining) psi-mi:"MI:0818"(molecular weight estimation by coomasie staining) uniprotkb:P0AC02 uniprotkb:P0A903 intact:EBI-1128087|uniprotkb:P77146|uniprotkb:Q47344|ensemblbacteria:AAC75644|ensemblbacteria:BAA16480 intact:EBI-1129043|uniprotkb:P21167|uniprotkb:P76564|ensemblbacteria:AAC75530|ensemblbacteria:BAA16354 psi-mi:bamd_ecoli(display_long)|uniprotkb:bamD(gene name)|psi-mi:bamD(display_short)|uniprotkb:yfiO(gene name synonym)|uniprotkb:JW2577(locus name)|uniprotkb:b2595(locus name) psi-mi:bamc_ecoli(display_long)|uniprotkb:bamC(gene name)|psi-mi:bamC(display_short)|uniprotkb:dapX(gene name synonym)|uniprotkb:nlpB(gene name synonym)|uniprotkb:JW2462(locus name)|uniprotkb:b2477(locus name) psi-mi:"MI:0071"(molecular sieving) Kim et al. (2011) pubmed:21937441|imex:IM-17388 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6196433|imex:IM-17388-2 - - psi-mi:"MI:0500"(biological role) psi-mi:"MI:0500"(biological role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417086.1|refseq:WP_000197686.1|ensemblbacteria:AAC75644(transcript)|ensemblbacteria:b2595(gene)|ensemblbacteria:BAA16480(gene)|ensemblbacteria:BAA16480(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0043165"(Gram-negative-bacterium-type cell outer membrane assembly)|go:"GO:0051205"(protein insertion into membrane)|go:"GO:1990063"(Bam protein complex)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR017689(Outer membrane assembly lipoprotein YfiO)|interpro:IPR039565|rcsb pdb:2YHC|rcsb pdb:3Q5M|rcsb pdb:3TGO|rcsb pdb:5AYW|rcsb pdb:5D0O|rcsb pdb:5D0Q|rcsb pdb:5EKQ|rcsb pdb:5LJO|rcsb pdb:6LYQ|rcsb pdb:6LYR|rcsb pdb:6LYS|rcsb pdb:6LYU|rcsb pdb:6SN9|rcsb pdb:6SOB|rcsb pdb:6SOJ|rcsb pdb:6V05|rcsb pdb:7BNQ|rcsb pdb:7NBX|rcsb pdb:7NCS|rcsb pdb:7ND0|rcsb pdb:7NRI|dip:DIP-51120N refseq:NP_416972.4|refseq:WP_001297320.1|ensemblbacteria:AAC75530(transcript)|ensemblbacteria:b2477(gene)|ensemblbacteria:BAA16354(gene)|ensemblbacteria:BAA16354(transcript)|go:"GO:0009986"(cell surface)|go:"GO:0042802"(identical protein binding)|go:"GO:0043165"(Gram-negative-bacterium-type cell outer membrane assembly)|go:"GO:0051205"(protein insertion into membrane)|go:"GO:1990063"(Bam protein complex)|interpro:IPR010653(NlpBDapX lipoprotein)|interpro:IPR014524(Lipoprotein, NlpB type)|interpro:IPR042268|rcsb pdb:2LAE|rcsb pdb:2LAF|rcsb pdb:2YH5|rcsb pdb:2YH6|rcsb pdb:3SNS|rcsb pdb:3TGO|rcsb pdb:5AYW|rcsb pdb:5D0O|rcsb pdb:5D0Q|rcsb pdb:5EKQ|rcsb pdb:5LJO|rcsb pdb:6LYQ|rcsb pdb:6LYR|rcsb pdb:6LYS|rcsb pdb:6LYU|rcsb pdb:6SN9|rcsb pdb:6SOB|rcsb pdb:6SOJ|rcsb pdb:6V05|rcsb pdb:7BNQ|rcsb pdb:7NBX|rcsb pdb:7NCS|rcsb pdb:7ND0|rcsb pdb:7NRI|dip:DIP-39898N - - - figure legend:FIGURE 1. Formation of the BamCD complex|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2012/07/11 2014/10/16 rogid:2Hsq+7DzvFcudrc+kYWfz/s/OR483333 rogid:uKNUHaYcGu0iXXBHURmL+BBTe7k83333 intact-crc:5300E715857CF82A|rigid:QLylzjK3qpMbReRIjTgpO+LECMs false his tag:n-n|sufficient binding region:26-245 necessary binding region:26-98|his tag:c-c - - psi-mi:"MI:0818"(molecular weight estimation by coomasie staining) psi-mi:"MI:0818"(molecular weight estimation by coomasie staining) uniprotkb:P0AC02 uniprotkb:P0A903 intact:EBI-1128087|uniprotkb:P77146|uniprotkb:Q47344|ensemblbacteria:AAC75644|ensemblbacteria:BAA16480 intact:EBI-1129043|uniprotkb:P21167|uniprotkb:P76564|ensemblbacteria:AAC75530|ensemblbacteria:BAA16354 psi-mi:bamd_ecoli(display_long)|uniprotkb:bamD(gene name)|psi-mi:bamD(display_short)|uniprotkb:yfiO(gene name synonym)|uniprotkb:JW2577(locus name)|uniprotkb:b2595(locus name) psi-mi:bamc_ecoli(display_long)|uniprotkb:bamC(gene name)|psi-mi:bamC(display_short)|uniprotkb:dapX(gene name synonym)|uniprotkb:nlpB(gene name synonym)|uniprotkb:JW2462(locus name)|uniprotkb:b2477(locus name) psi-mi:"MI:0114"(x-ray crystallography) Kim et al. (2011) pubmed:21937441|imex:IM-17388 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6247848|pdbe:3TGO|imex:IM-17388-3 - - psi-mi:"MI:0500"(biological role) psi-mi:"MI:0500"(biological role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417086.1|refseq:WP_000197686.1|ensemblbacteria:AAC75644(transcript)|ensemblbacteria:b2595(gene)|ensemblbacteria:BAA16480(gene)|ensemblbacteria:BAA16480(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0043165"(Gram-negative-bacterium-type cell outer membrane assembly)|go:"GO:0051205"(protein insertion into membrane)|go:"GO:1990063"(Bam protein complex)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR017689(Outer membrane assembly lipoprotein YfiO)|interpro:IPR039565|rcsb pdb:2YHC|rcsb pdb:3Q5M|rcsb pdb:3TGO|rcsb pdb:5AYW|rcsb pdb:5D0O|rcsb pdb:5D0Q|rcsb pdb:5EKQ|rcsb pdb:5LJO|rcsb pdb:6LYQ|rcsb pdb:6LYR|rcsb pdb:6LYS|rcsb pdb:6LYU|rcsb pdb:6SN9|rcsb pdb:6SOB|rcsb pdb:6SOJ|rcsb pdb:6V05|rcsb pdb:7BNQ|rcsb pdb:7NBX|rcsb pdb:7NCS|rcsb pdb:7ND0|rcsb pdb:7NRI|dip:DIP-51120N refseq:NP_416972.4|refseq:WP_001297320.1|ensemblbacteria:AAC75530(transcript)|ensemblbacteria:b2477(gene)|ensemblbacteria:BAA16354(gene)|ensemblbacteria:BAA16354(transcript)|go:"GO:0009986"(cell surface)|go:"GO:0042802"(identical protein binding)|go:"GO:0043165"(Gram-negative-bacterium-type cell outer membrane assembly)|go:"GO:0051205"(protein insertion into membrane)|go:"GO:1990063"(Bam protein complex)|interpro:IPR010653(NlpBDapX lipoprotein)|interpro:IPR014524(Lipoprotein, NlpB type)|interpro:IPR042268|rcsb pdb:2LAE|rcsb pdb:2LAF|rcsb pdb:2YH5|rcsb pdb:2YH6|rcsb pdb:3SNS|rcsb pdb:3TGO|rcsb pdb:5AYW|rcsb pdb:5D0O|rcsb pdb:5D0Q|rcsb pdb:5EKQ|rcsb pdb:5LJO|rcsb pdb:6LYQ|rcsb pdb:6LYR|rcsb pdb:6LYS|rcsb pdb:6LYU|rcsb pdb:6SN9|rcsb pdb:6SOB|rcsb pdb:6SOJ|rcsb pdb:6V05|rcsb pdb:7BNQ|rcsb pdb:7NBX|rcsb pdb:7NCS|rcsb pdb:7ND0|rcsb pdb:7NRI|dip:DIP-39898N - - - figure legend:Figure 2, Figure 3|comment:"Although the full-length BamCD complex was used for crystallization, BamC was cleaved to a smaller fragment corresponding to BamCUN (Asp28–Ala217) in the crystallization drop during incubation. BamC has been previously shown to be susceptible to degradation in the linker region connecting the N- and C-terminal domains."|3d-resolution:2.9A|3d-r-factors:"R-Value: 0.181 (obs.), R-Free: 0.243"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2012/07/11 2014/10/16 rogid:2Hsq+7DzvFcudrc+kYWfz/s/OR483333 rogid:uKNUHaYcGu0iXXBHURmL+BBTe7k83333 intact-crc:FEB728D136A21498|rigid:QLylzjK3qpMbReRIjTgpO+LECMs false sufficient binding region:26-245 necessary binding region:28-217 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)