#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:Q02455	ensemblgenomes:YGR032W	intact:EBI-11009|ensemblfungi:YKR095W|uniprotkb:D6VXF5	intact:EBI-3952586	psi-mi:mlp1_yeast(display_long)|uniprotkb:MLP1(gene name)|psi-mi:MLP1(display_short)|uniprotkb:YKR095W(locus name)|uniprotkb:YKR415(orf name)|uniprotkb:Myosin-like protein 1(gene name synonym)	psi-mi:fks2_yeast_gene(display_short)|psi-mi:YGR032W(display_long)	psi-mi:"MI:0402"(chromatin immunoprecipitation assay)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952595|imex:IM-15753-21	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0250"(gene)	ensemblfungi:YKR095W(gene)|ensemblfungi:YKR095W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005643"(nuclear pore)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0034398"(telomere tethering at nuclear periphery)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0044615"(nuclear pore nuclear basket)|go:"GO:0071048"|go:"GO:0090204"(protein localization to nuclear pore)|go:"GO:0140586"(promoter-terminator loop anchoring activity)|go:"GO:1901925"(negative regulation of protein import into nucleus during spindle assembly checkpoint)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR012929(Tetratricopeptide, MLP1/MLP2-like)|refseq:NP_013021.1|sgd:S000001803|mint:Q02455|dip:DIP-6675N	-	-	-	-	figure legend:Fig. 1A|comment:Mlp1 associates with the FKS2 promoter and coding region|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:Zgi3tXX6VuWqZ8Knzh/jAHxCMzU559292	-	intact-crc:8BEB667006831609	false	ha tag:?-?	-	-	-	psi-mi:"MI:0088"(primer specific pcr)	psi-mi:"MI:0088"(primer specific pcr)
ensemblgenomes:YGR032W	uniprotkb:P09959	intact:EBI-3952586	intact:EBI-18641|uniprotkb:D6VYI6|ensemblfungi:YLR182W	psi-mi:fks2_yeast_gene(display_short)|psi-mi:YGR032W(display_long)	psi-mi:swi6_yeast(display_long)|uniprotkb:SWI6(gene name)|psi-mi:SWI6(display_short)|uniprotkb:YLR182W(locus name)|uniprotkb:L9470.8(orf name)|uniprotkb:Cell-cycle box factor subunit SWI6(gene name synonym)|uniprotkb:Trans-acting activator of HO endonuclease gene(gene name synonym)|uniprotkb:MBF subunit P90(gene name synonym)	psi-mi:"MI:0402"(chromatin immunoprecipitation assay)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952612|imex:IM-15753-23	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0250"(gene)	psi-mi:"MI:0326"(protein)	-	ensemblfungi:YLR182W(gene)|ensemblfungi:YLR182W_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0010845"(positive regulation of reciprocal meiotic recombination)|go:"GO:0030907"(MBF transcription complex)|go:"GO:0033309"(SBF transcription complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0071931"(positive regulation of transcription involved in G1/S transition of mitotic cell cycle)|interpro:IPR002110(Ankyrin)|interpro:IPR036770|interpro:IPR040822|rcsb pdb:1SW6|rcsb pdb:2XFV|rcsb pdb:5XW5|refseq:NP_013283.1|sgd:S000004172|dip:DIP-598N|mint:P09959	-	-	crc64:9B317FCACEEC493C	figure legend:Fig. 1A|comment:SWI6 associates with the FKS2 promoter region|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	-	rogid:rtovwtMGdOLKrOttgos4Ej9V160559292	intact-crc:40E35C740E400B0E	false	-	ha tag:?-?	-	-	psi-mi:"MI:0088"(primer specific pcr)	psi-mi:"MI:0088"(primer specific pcr)
uniprotkb:P25302	ensemblgenomes:YGR032W	intact:EBI-18626|ensemblfungi:YER111C|uniprotkb:D3DM17	intact:EBI-3952586	psi-mi:swi4_yeast(display_long)|uniprotkb:SWI4(gene name)|psi-mi:SWI4(display_short)|uniprotkb:ART1(gene name synonym)|uniprotkb:YER111C(locus name)|uniprotkb:Cell-cycle box factor subunit SWI4(gene name synonym)|uniprotkb:Protein ART1(gene name synonym)	psi-mi:fks2_yeast_gene(display_short)|psi-mi:YGR032W(display_long)	psi-mi:"MI:0402"(chromatin immunoprecipitation assay)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952605|imex:IM-15753-22	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0250"(gene)	ensemblfungi:YER111C(gene)|ensemblfungi:YER111C_mRNA(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0030907"(MBF transcription complex)|go:"GO:0033309"(SBF transcription complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0071931"(positive regulation of transcription involved in G1/S transition of mitotic cell cycle)|interpro:IPR002110(Ankyrin)|interpro:IPR003163(DNA-binding, yeast)|interpro:IPR018004|interpro:IPR029792|interpro:IPR036770|interpro:IPR036887|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|refseq:NP_011036.1|sgd:S000000913|dip:DIP-847N|mint:P25302	-	-	crc64:40EA2EA7732687A9	-	figure legend:Fig. 1A|comment:SWi4 associates with the FKS2 promoter region|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:LlB1EIrlcujhBYs6ipXPlRaWf+A559292	-	intact-crc:5F7BB099AA9C71C7	false	ha tag:?-?	-	-	-	psi-mi:"MI:0088"(primer specific pcr)	psi-mi:"MI:0088"(primer specific pcr)
ensemblgenomes:YGR032W	uniprotkb:Q00772	intact:EBI-3952586	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	psi-mi:fks2_yeast_gene(display_short)|psi-mi:YGR032W(display_long)	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:"MI:0402"(chromatin immunoprecipitation assay)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952588|imex:IM-15753-20	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0250"(gene)	psi-mi:"MI:0326"(protein)	-	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	-	-	crc64:559A3E0D3EBDE5F9	figure legend:Figs. 1A, 4F, 6F|comment:Mpk1 associates with the FKS2 promoter and coding region|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	-	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	intact-crc:7F50472F478DA021	false	-	ha tag:?-?|mutation decreasing interaction:191-191,193-193	-	-	psi-mi:"MI:0088"(primer specific pcr)	psi-mi:"MI:0088"(primer specific pcr)
ensemblgenomes:YPL256C	uniprotkb:P38351	intact:EBI-3952884	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	psi-mi:cg12_yeast_gene(display_short)|psi-mi:YPL256C(display_long)	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:"MI:0402"(chromatin immunoprecipitation assay)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952929|imex:IM-15753-24	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0250"(gene)	psi-mi:"MI:0326"(protein)	-	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	-	-	-	figure legend:Fig. 4|comment:paf-1 associates with the CLN2 promoter and the coding region|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	-	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	intact-crc:51E14B20EA1B7E27	false	-	ha tag:?-?	-	-	psi-mi:"MI:0088"(primer specific pcr)	psi-mi:"MI:0088"(primer specific pcr)
uniprotkb:P16370	ensemblgenomes:YPL256C	intact:EBI-15773|ensemblfungi:YIL021W|uniprotkb:D6VVQ8	intact:EBI-3952884	psi-mi:rpb3_yeast(display_long)|uniprotkb:YIL021W(locus name)|uniprotkb:RPB3(gene name)|psi-mi:RPB3(display_short)|uniprotkb:DNA-directed RNA polymerase II 45 kDa polypeptide(gene name synonym)|uniprotkb:B44.5(gene name synonym)	psi-mi:cg12_yeast_gene(display_short)|psi-mi:YPL256C(display_long)	psi-mi:"MI:0402"(chromatin immunoprecipitation assay)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952943|imex:IM-15753-25	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0250"(gene)	sgd:S000001283|rcsb pdb:3RZO|rcsb pdb:3S14|rcsb pdb:3S15|rcsb pdb:3S16|rcsb pdb:3RZD|rcsb pdb:3S17|rcsb pdb:3S1M|rcsb pdb:3S1N|rcsb pdb:3S1Q|rcsb pdb:3S1R|rcsb pdb:3S2D|rcsb pdb:3S2H|rcsb pdb:4A3B|rcsb pdb:4A3C|rcsb pdb:4A3D|rcsb pdb:4A3E|rcsb pdb:4A3F|rcsb pdb:4A3G|rcsb pdb:4A3I|rcsb pdb:4A3J|rcsb pdb:4A3K|rcsb pdb:4A3L|rcsb pdb:4A3M|rcsb pdb:4A93|rcsb pdb:4BBR|rcsb pdb:4BBS|rcsb pdb:4BXX|rcsb pdb:4BXZ|rcsb pdb:4BY1|rcsb pdb:4BY7|rcsb pdb:4V1M|rcsb pdb:4V1N|rcsb pdb:4V1O|rcsb pdb:4X67|rcsb pdb:4X6A|rcsb pdb:4Y52|rcsb pdb:4Y7N|rcsb pdb:5C3E|rcsb pdb:5C44|rcsb pdb:5C4J|rcsb pdb:5C4X|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5IP7|rcsb pdb:5IP9|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5OT2|rcsb pdb:5SVA|rcsb pdb:5U5Q|rcsb pdb:5VVR|rcsb pdb:5VVS|rcsb pdb:5W4U|rcsb pdb:5W51|rcsb pdb:6BLO|rcsb pdb:6BLP|rcsb pdb:6BM2|rcsb pdb:6BM4|rcsb pdb:6BQF|rcsb pdb:6GYK|rcsb pdb:6GYL|rcsb pdb:6GYM|rcsb pdb:6I84|rcsb pdb:6O6C|rcsb pdb:6UPX|rcsb pdb:5C4A|rcsb pdb:7KEF|rcsb pdb:6UPY|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|rcsb pdb:6UPZ|reactome:R-SCE-674695|rcsb pdb:6UQ0|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-6807505|reactome:R-SCE-72086|reactome:R-SCE-73776|rcsb pdb:6UQ1|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|reactome:R-SCE-9018519|rcsb pdb:6UQ2|rcsb pdb:6UQ3|rcsb pdb:7KED|rcsb pdb:7KEE|ensemblfungi:YIL021W(gene)|go:"GO:0001172"(transcription, RNA-templated)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0046872"(metal ion binding)|go:"GO:0046983"(protein dimerization activity)|interpro:IPR001514(DNA-directed RNA polymerase, 30-40 kDa subunit, conserved site)|interpro:IPR011262(DNA-directed RNA polymerase, insert)|interpro:IPR011263(DNA-directed RNA polymerase, RpoA/D/Rpb3-type)|interpro:IPR036603|interpro:IPR036643|rcsb pdb:1I3Q|rcsb pdb:1I50|rcsb pdb:1I6H|rcsb pdb:1K83|rcsb pdb:1NIK|rcsb pdb:1NT9|rcsb pdb:1PQV|rcsb pdb:1R5U|rcsb pdb:1R9S|rcsb pdb:1R9T|rcsb pdb:1SFO|rcsb pdb:1TWA|rcsb pdb:1TWC|rcsb pdb:1TWF|ensemblfungi:YIL021W_mRNA(transcript)|rcsb pdb:1TWH|rcsb pdb:1WCM|rcsb pdb:1Y1V|rcsb pdb:1Y1W|rcsb pdb:1Y1Y|rcsb pdb:1Y77|rcsb pdb:2B63|rcsb pdb:2B8K|rcsb pdb:2E2H|rcsb pdb:2E2I|rcsb pdb:2E2J|rcsb pdb:2JA5|rcsb pdb:2JA6|rcsb pdb:2JA7|rcsb pdb:2JA8|rcsb pdb:2NVQ|rcsb pdb:2NVT|rcsb pdb:2NVX|rcsb pdb:2NVY|rcsb pdb:2NVZ|rcsb pdb:2R7Z|rcsb pdb:2R92|rcsb pdb:2R93|rcsb pdb:2VUM|rcsb pdb:2YU9|rcsb pdb:3CQZ|rcsb pdb:3FKI|rcsb pdb:3GTG|rcsb pdb:3GTJ|rcsb pdb:1TWG|rcsb pdb:3GTK|rcsb pdb:3GTL|rcsb pdb:3GTM|rcsb pdb:3GTO|rcsb pdb:3GTP|rcsb pdb:3GTQ|rcsb pdb:3H3V|rcsb pdb:3HOU|rcsb pdb:3HOV|rcsb pdb:3HOW|rcsb pdb:3HOX|rcsb pdb:3HOY|rcsb pdb:3HOZ|rcsb pdb:3I4M|rcsb pdb:3I4N|rcsb pdb:3J0K|rcsb pdb:3J1N|rcsb pdb:3K1F|rcsb pdb:3K7A|rcsb pdb:3M3Y|rcsb pdb:3M4O|rcsb pdb:3PO2|rcsb pdb:3PO3|rcsb pdb:3QT1|refseq:NP_012243.3|dip:DIP-837N|mint:P16370	-	-	crc64:8E1D1E6BB7B51D89	-	figure legend:Fig. 4B|comment:paf-1 associates with the CLN2 promoter and the coding region|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:JMIGnvEpr4Scb2i5tqjqSV2wvEw559292	-	intact-crc:CD8BC5138AB02B04	false	ha tag:?-?	-	-	-	psi-mi:"MI:0088"(primer specific pcr)	psi-mi:"MI:0088"(primer specific pcr)
ensemblgenomes:YGR032W	uniprotkb:P16370	intact:EBI-3952586	intact:EBI-15773|ensemblfungi:YIL021W|uniprotkb:D6VVQ8	psi-mi:fks2_yeast_gene(display_short)|psi-mi:YGR032W(display_long)	psi-mi:rpb3_yeast(display_long)|uniprotkb:YIL021W(locus name)|uniprotkb:RPB3(gene name)|psi-mi:RPB3(display_short)|uniprotkb:DNA-directed RNA polymerase II 45 kDa polypeptide(gene name synonym)|uniprotkb:B44.5(gene name synonym)	psi-mi:"MI:0402"(chromatin immunoprecipitation assay)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952960|imex:IM-15753-26	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0250"(gene)	psi-mi:"MI:0326"(protein)	-	sgd:S000001283|rcsb pdb:3RZO|rcsb pdb:3S14|rcsb pdb:3S15|rcsb pdb:3S16|rcsb pdb:3RZD|rcsb pdb:3S17|rcsb pdb:3S1M|rcsb pdb:3S1N|rcsb pdb:3S1Q|rcsb pdb:3S1R|rcsb pdb:3S2D|rcsb pdb:3S2H|rcsb pdb:4A3B|rcsb pdb:4A3C|rcsb pdb:4A3D|rcsb pdb:4A3E|rcsb pdb:4A3F|rcsb pdb:4A3G|rcsb pdb:4A3I|rcsb pdb:4A3J|rcsb pdb:4A3K|rcsb pdb:4A3L|rcsb pdb:4A3M|rcsb pdb:4A93|rcsb pdb:4BBR|rcsb pdb:4BBS|rcsb pdb:4BXX|rcsb pdb:4BXZ|rcsb pdb:4BY1|rcsb pdb:4BY7|rcsb pdb:4V1M|rcsb pdb:4V1N|rcsb pdb:4V1O|rcsb pdb:4X67|rcsb pdb:4X6A|rcsb pdb:4Y52|rcsb pdb:4Y7N|rcsb pdb:5C3E|rcsb pdb:5C44|rcsb pdb:5C4J|rcsb pdb:5C4X|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5IP7|rcsb pdb:5IP9|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5OT2|rcsb pdb:5SVA|rcsb pdb:5U5Q|rcsb pdb:5VVR|rcsb pdb:5VVS|rcsb pdb:5W4U|rcsb pdb:5W51|rcsb pdb:6BLO|rcsb pdb:6BLP|rcsb pdb:6BM2|rcsb pdb:6BM4|rcsb pdb:6BQF|rcsb pdb:6GYK|rcsb pdb:6GYL|rcsb pdb:6GYM|rcsb pdb:6I84|rcsb pdb:6O6C|rcsb pdb:6UPX|rcsb pdb:5C4A|rcsb pdb:7KEF|rcsb pdb:6UPY|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|rcsb pdb:6UPZ|reactome:R-SCE-674695|rcsb pdb:6UQ0|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-6807505|reactome:R-SCE-72086|reactome:R-SCE-73776|rcsb pdb:6UQ1|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|reactome:R-SCE-9018519|rcsb pdb:6UQ2|rcsb pdb:6UQ3|rcsb pdb:7KED|rcsb pdb:7KEE|ensemblfungi:YIL021W(gene)|go:"GO:0001172"(transcription, RNA-templated)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0046872"(metal ion binding)|go:"GO:0046983"(protein dimerization activity)|interpro:IPR001514(DNA-directed RNA polymerase, 30-40 kDa subunit, conserved site)|interpro:IPR011262(DNA-directed RNA polymerase, insert)|interpro:IPR011263(DNA-directed RNA polymerase, RpoA/D/Rpb3-type)|interpro:IPR036603|interpro:IPR036643|rcsb pdb:1I3Q|rcsb pdb:1I50|rcsb pdb:1I6H|rcsb pdb:1K83|rcsb pdb:1NIK|rcsb pdb:1NT9|rcsb pdb:1PQV|rcsb pdb:1R5U|rcsb pdb:1R9S|rcsb pdb:1R9T|rcsb pdb:1SFO|rcsb pdb:1TWA|rcsb pdb:1TWC|rcsb pdb:1TWF|ensemblfungi:YIL021W_mRNA(transcript)|rcsb pdb:1TWH|rcsb pdb:1WCM|rcsb pdb:1Y1V|rcsb pdb:1Y1W|rcsb pdb:1Y1Y|rcsb pdb:1Y77|rcsb pdb:2B63|rcsb pdb:2B8K|rcsb pdb:2E2H|rcsb pdb:2E2I|rcsb pdb:2E2J|rcsb pdb:2JA5|rcsb pdb:2JA6|rcsb pdb:2JA7|rcsb pdb:2JA8|rcsb pdb:2NVQ|rcsb pdb:2NVT|rcsb pdb:2NVX|rcsb pdb:2NVY|rcsb pdb:2NVZ|rcsb pdb:2R7Z|rcsb pdb:2R92|rcsb pdb:2R93|rcsb pdb:2VUM|rcsb pdb:2YU9|rcsb pdb:3CQZ|rcsb pdb:3FKI|rcsb pdb:3GTG|rcsb pdb:3GTJ|rcsb pdb:1TWG|rcsb pdb:3GTK|rcsb pdb:3GTL|rcsb pdb:3GTM|rcsb pdb:3GTO|rcsb pdb:3GTP|rcsb pdb:3GTQ|rcsb pdb:3H3V|rcsb pdb:3HOU|rcsb pdb:3HOV|rcsb pdb:3HOW|rcsb pdb:3HOX|rcsb pdb:3HOY|rcsb pdb:3HOZ|rcsb pdb:3I4M|rcsb pdb:3I4N|rcsb pdb:3J0K|rcsb pdb:3J1N|rcsb pdb:3K1F|rcsb pdb:3K7A|rcsb pdb:3M3Y|rcsb pdb:3M4O|rcsb pdb:3PO2|rcsb pdb:3PO3|rcsb pdb:3QT1|refseq:NP_012243.3|dip:DIP-837N|mint:P16370	-	-	crc64:8E1D1E6BB7B51D89	figure legend:Fig. 4B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	-	rogid:JMIGnvEpr4Scb2i5tqjqSV2wvEw559292	intact-crc:520C90B9778F6DBB	false	-	-	-	-	psi-mi:"MI:0088"(primer specific pcr)	psi-mi:"MI:0088"(primer specific pcr)
ensemblgenomes:YGR032W	uniprotkb:P38351	intact:EBI-3952586	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	psi-mi:fks2_yeast_gene(display_short)|psi-mi:YGR032W(display_long)	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:"MI:0402"(chromatin immunoprecipitation assay)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952967|imex:IM-15753-27	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0250"(gene)	psi-mi:"MI:0326"(protein)	-	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	-	-	-	figure legend:Fig. 4E|comment:paf-1 associates with the fks2 promoter and the coding region|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	-	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	intact-crc:B6CC144DAD0D91E2	false	-	ha tag:?-?|mutation decreasing interaction:193-193,191-191	-	-	psi-mi:"MI:0088"(primer specific pcr)	psi-mi:"MI:0088"(primer specific pcr)
uniprotkb:Q00772	uniprotkb:Q02336	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name)	psi-mi:"MI:0018"(two hybrid)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952660|imex:IM-15753-7	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880	psi-mi:"MI:0469"(intact)	crc64:559A3E0D3EBDE5F9	crc64:9637E1EDBBED0AC3	figure legend:Fig. 3A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292	intact-crc:094623DE70CD5F7B|rigid:8CoX5L4BkEM8H27I+YXH4oxeE4I	false	-	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q03330	uniprotkb:Q00772	intact:EBI-7458|uniprotkb:Q6B165|uniprotkb:D6VV32|ensemblfungi:YGR252W	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	psi-mi:gcn5_yeast(display_long)|uniprotkb:YGR252W(locus name)|uniprotkb:GCN5(gene name)|psi-mi:GCN5(display_short)|uniprotkb:ADA4(gene name synonym)|uniprotkb:SWI9(gene name synonym)	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:"MI:0018"(two hybrid)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952656|imex:IM-15753-6	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_011768.1|sgd:S000003484|mint:Q03330|dip:DIP-710N|ensemblfungi:YGR252W(gene)|ensemblfungi:YGR252W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000775"(chromosome, centromeric region)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0004402"(histone acetyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0010484"(H3 histone acetyltransferase activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0140068"(histone crotonyltransferase activity)|interpro:IPR000182(GCN5-related N-acetyltransferase)|interpro:IPR001487(Bromodomain)|interpro:IPR016181(Acyl-CoA N-acyltransferase)|interpro:IPR018359|interpro:IPR036427|interpro:IPR037800|rcsb pdb:1E6I|rcsb pdb:1YGH|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880|reactome:R-SCE-9018519	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	psi-mi:"MI:0469"(intact)	crc64:3200730DDC7EF70D	crc64:559A3E0D3EBDE5F9	figure legend:Fig. 3A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:Y8SHidiW4dJo0oxEDksur8MC/L0559292	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	intact-crc:FD0674C872D84DDD|rigid:JqlrzWM9karc1FYw05636nf6mFs	false	-	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P38439	uniprotkb:Q00772	intact:EBI-10108|uniprotkb:D6W2I1|ensemblfungi:YOR123C	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	psi-mi:leo1_yeast(display_long)|uniprotkb:O3278(orf name)|uniprotkb:YOR3278C(orf name)|uniprotkb:YOR123C(locus name)|uniprotkb:LEO1(gene name)|psi-mi:LEO1(display_short)	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:"MI:0018"(two hybrid)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952652|imex:IM-15753-5	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_014766.1|sgd:S000005649|ensemblfungi:YOR123C(gene)|ensemblfungi:YOR123C_mRNA(transcript)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0006325"(chromatin organization)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0080182"(histone H3-K4 trimethylation)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR007149(Leo1-like protein)|go:"GO:0005634"(nucleus)|reactome:R-SCE-674695|reactome:R-SCE-75955|dip:DIP-4143N|mint:P38439	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	psi-mi:"MI:0469"(intact)	crc64:ABDE3D7D5A2C78A5	crc64:559A3E0D3EBDE5F9	figure legend:Fig. 3A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:qhB5pVP3l4WqXtp3JhmPsxEVHE0559292	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	intact-crc:0ACB62758FCC617F|rigid:roVQj+JgrHcSeF94CzGL6EZizSE	false	-	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q00772	uniprotkb:Q06697	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	intact:EBI-29913|uniprotkb:D6VZ54|ensemblfungi:YLR418C	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:cdc73_yeast(display_long)|uniprotkb:RNA polymerase-associated protein CDC73(gene name synonym)|uniprotkb:CDC73(gene name)|psi-mi:CDC73(display_short)|uniprotkb:YLR418C(locus name)	psi-mi:"MI:0018"(two hybrid)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952636|imex:IM-15753-1	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	refseq:NP_013522.1|sgd:S000004410|dip:DIP-1148N|mint:Q06697|ensemblfungi:YLR418C(gene)|ensemblfungi:YLR418C_mRNA(transcript)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034402"(recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007852(RNA polymerase II accessory factor, Cdc73)|interpro:IPR031336|interpro:IPR038103|rcsb pdb:3V46|rcsb pdb:4DM4|reactome:R-SCE-674695|reactome:R-SCE-75955	psi-mi:"MI:0469"(intact)	crc64:559A3E0D3EBDE5F9	crc64:9580B53EEFB75345	figure legend:Fig. 3A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	rogid:9d/PessN2v7cZ2ZuQW1vjTnjcaQ559292	intact-crc:0DDC07F00D9ED952|rigid:g6GAmeHehAzHPPmAZ3EVRK00kk8	false	sufficient binding region:1-328	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P53064	uniprotkb:Q00772	intact:EBI-16303|uniprotkb:P89115|ensemblfungi:YGL244W|uniprotkb:D6VV91	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	psi-mi:rtf1_yeast(display_long)|uniprotkb:RTF1(gene name)|psi-mi:RTF1(display_short)|uniprotkb:YGL244W(locus name)|uniprotkb:HRA458(orf name)|uniprotkb:CSL3(gene name synonym)	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:"MI:0018"(two hybrid)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952642|imex:IM-15753-3	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001160"(regulation of histone H3-K79 methylation)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR004343(Plus-3)|interpro:IPR036128|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|rcsb pdb:5E8B|go:"GO:0034402"(recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex)|go:"GO:0035327"|go:"GO:0042138"(meiotic DNA double-strand break formation)|rcsb pdb:5EMX|ensemblfungi:YGL244W(gene)|ensemblfungi:YGL244W_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_011270.1|sgd:S000003213|dip:DIP-4065N|mint:P53064	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	psi-mi:"MI:0469"(intact)	crc64:13AECCEC6D63CED4	crc64:559A3E0D3EBDE5F9	figure legend:Fig. 3A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:jPawNxTgh9wPA5Uxbn5QCUeDw9Q559292	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	intact-crc:7E34E3ABA0B50BB6|rigid:0/lnCM4nbSQmwGW8zTPRT/N7OnY	false	-	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q00772	uniprotkb:P38351	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:"MI:0018"(two hybrid)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952628|imex:IM-15753-2	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	psi-mi:"MI:0469"(intact)	crc64:559A3E0D3EBDE5F9	-	figure legend:Supp. fig 1, Fig. 3A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	intact-crc:DBE5276A741D1B7B|rigid:R9ejUwa3tKq1eRFvzDQeisxHwBw	false	ha tag:1-328	sufficient binding region:85-131	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q00772	uniprotkb:P89105	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	intact:EBI-5283|uniprotkb:O14409|uniprotkb:Q07332|uniprotkb:Q08292|uniprotkb:D6W1S4|ensemblfungi:YOL145C	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:ctr9_yeast(display_long)|uniprotkb:CTR9(gene name)|psi-mi:CTR9(display_short)|uniprotkb:CDP1(gene name synonym)|uniprotkb:Cln three-requiring protein 9(gene name synonym)|uniprotkb:Centromere-binding factor 1-dependent protein 1(gene name synonym)|uniprotkb:YOL145C(locus name)	psi-mi:"MI:0018"(two hybrid)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952648|imex:IM-15753-4	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	refseq:NP_014496.2|sgd:S000005505|dip:DIP-2814N|mint:P89105|ensemblfungi:YOL145C(gene)|ensemblfungi:YOL145C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0035327"|go:"GO:0045142"(triplex DNA binding)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0060260"(regulation of transcription initiation from RNA polymerase II promoter)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR031101|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955	psi-mi:"MI:0469"(intact)	crc64:559A3E0D3EBDE5F9	crc64:F794ECBAD26D4820	figure legend:Fig. 3A|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	rogid:85qAqldtQL8T7JBgNxrvAYtHhd0559292	intact-crc:F0D63E0A5F7160CF|rigid:vhsnc7+FtPfgmC2IANgqu+jayss	false	-	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P16370	uniprotkb:P38351	intact:EBI-15773|ensemblfungi:YIL021W|uniprotkb:D6VVQ8	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	psi-mi:rpb3_yeast(display_long)|uniprotkb:YIL021W(locus name)|uniprotkb:RPB3(gene name)|psi-mi:RPB3(display_short)|uniprotkb:DNA-directed RNA polymerase II 45 kDa polypeptide(gene name synonym)|uniprotkb:B44.5(gene name synonym)	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952874|imex:IM-15753-19	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000001283|rcsb pdb:3RZO|rcsb pdb:3S14|rcsb pdb:3S15|rcsb pdb:3S16|rcsb pdb:3RZD|rcsb pdb:3S17|rcsb pdb:3S1M|rcsb pdb:3S1N|rcsb pdb:3S1Q|rcsb pdb:3S1R|rcsb pdb:3S2D|rcsb pdb:3S2H|rcsb pdb:4A3B|rcsb pdb:4A3C|rcsb pdb:4A3D|rcsb pdb:4A3E|rcsb pdb:4A3F|rcsb pdb:4A3G|rcsb pdb:4A3I|rcsb pdb:4A3J|rcsb pdb:4A3K|rcsb pdb:4A3L|rcsb pdb:4A3M|rcsb pdb:4A93|rcsb pdb:4BBR|rcsb pdb:4BBS|rcsb pdb:4BXX|rcsb pdb:4BXZ|rcsb pdb:4BY1|rcsb pdb:4BY7|rcsb pdb:4V1M|rcsb pdb:4V1N|rcsb pdb:4V1O|rcsb pdb:4X67|rcsb pdb:4X6A|rcsb pdb:4Y52|rcsb pdb:4Y7N|rcsb pdb:5C3E|rcsb pdb:5C44|rcsb pdb:5C4J|rcsb pdb:5C4X|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5IP7|rcsb pdb:5IP9|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5OT2|rcsb pdb:5SVA|rcsb pdb:5U5Q|rcsb pdb:5VVR|rcsb pdb:5VVS|rcsb pdb:5W4U|rcsb pdb:5W51|rcsb pdb:6BLO|rcsb pdb:6BLP|rcsb pdb:6BM2|rcsb pdb:6BM4|rcsb pdb:6BQF|rcsb pdb:6GYK|rcsb pdb:6GYL|rcsb pdb:6GYM|rcsb pdb:6I84|rcsb pdb:6O6C|rcsb pdb:6UPX|rcsb pdb:5C4A|rcsb pdb:7KEF|rcsb pdb:6UPY|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|rcsb pdb:6UPZ|reactome:R-SCE-674695|rcsb pdb:6UQ0|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-6807505|reactome:R-SCE-72086|reactome:R-SCE-73776|rcsb pdb:6UQ1|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|reactome:R-SCE-9018519|rcsb pdb:6UQ2|rcsb pdb:6UQ3|rcsb pdb:7KED|rcsb pdb:7KEE|ensemblfungi:YIL021W(gene)|go:"GO:0001172"(transcription, RNA-templated)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0046872"(metal ion binding)|go:"GO:0046983"(protein dimerization activity)|interpro:IPR001514(DNA-directed RNA polymerase, 30-40 kDa subunit, conserved site)|interpro:IPR011262(DNA-directed RNA polymerase, insert)|interpro:IPR011263(DNA-directed RNA polymerase, RpoA/D/Rpb3-type)|interpro:IPR036603|interpro:IPR036643|rcsb pdb:1I3Q|rcsb pdb:1I50|rcsb pdb:1I6H|rcsb pdb:1K83|rcsb pdb:1NIK|rcsb pdb:1NT9|rcsb pdb:1PQV|rcsb pdb:1R5U|rcsb pdb:1R9S|rcsb pdb:1R9T|rcsb pdb:1SFO|rcsb pdb:1TWA|rcsb pdb:1TWC|rcsb pdb:1TWF|ensemblfungi:YIL021W_mRNA(transcript)|rcsb pdb:1TWH|rcsb pdb:1WCM|rcsb pdb:1Y1V|rcsb pdb:1Y1W|rcsb pdb:1Y1Y|rcsb pdb:1Y77|rcsb pdb:2B63|rcsb pdb:2B8K|rcsb pdb:2E2H|rcsb pdb:2E2I|rcsb pdb:2E2J|rcsb pdb:2JA5|rcsb pdb:2JA6|rcsb pdb:2JA7|rcsb pdb:2JA8|rcsb pdb:2NVQ|rcsb pdb:2NVT|rcsb pdb:2NVX|rcsb pdb:2NVY|rcsb pdb:2NVZ|rcsb pdb:2R7Z|rcsb pdb:2R92|rcsb pdb:2R93|rcsb pdb:2VUM|rcsb pdb:2YU9|rcsb pdb:3CQZ|rcsb pdb:3FKI|rcsb pdb:3GTG|rcsb pdb:3GTJ|rcsb pdb:1TWG|rcsb pdb:3GTK|rcsb pdb:3GTL|rcsb pdb:3GTM|rcsb pdb:3GTO|rcsb pdb:3GTP|rcsb pdb:3GTQ|rcsb pdb:3H3V|rcsb pdb:3HOU|rcsb pdb:3HOV|rcsb pdb:3HOW|rcsb pdb:3HOX|rcsb pdb:3HOY|rcsb pdb:3HOZ|rcsb pdb:3I4M|rcsb pdb:3I4N|rcsb pdb:3J0K|rcsb pdb:3J1N|rcsb pdb:3K1F|rcsb pdb:3K7A|rcsb pdb:3M3Y|rcsb pdb:3M4O|rcsb pdb:3PO2|rcsb pdb:3PO3|rcsb pdb:3QT1|refseq:NP_012243.3|dip:DIP-837N|mint:P16370	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	psi-mi:"MI:0469"(intact)	crc64:8E1D1E6BB7B51D89	-	figure legend:Supp. Fig 3|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:JMIGnvEpr4Scb2i5tqjqSV2wvEw559292	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	intact-crc:EC595EC0F52EC7B6|rigid:5R+MNsq2F93dC6HCq+a9sI0vdKc	false	zz tag:?-?|ha tag:?-?	flag tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q06697	uniprotkb:P38351	intact:EBI-29913|uniprotkb:D6VZ54|ensemblfungi:YLR418C	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	psi-mi:cdc73_yeast(display_long)|uniprotkb:RNA polymerase-associated protein CDC73(gene name synonym)|uniprotkb:CDC73(gene name)|psi-mi:CDC73(display_short)|uniprotkb:YLR418C(locus name)	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952864|imex:IM-15753-18	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013522.1|sgd:S000004410|dip:DIP-1148N|mint:Q06697|ensemblfungi:YLR418C(gene)|ensemblfungi:YLR418C_mRNA(transcript)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034402"(recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007852(RNA polymerase II accessory factor, Cdc73)|interpro:IPR031336|interpro:IPR038103|rcsb pdb:3V46|rcsb pdb:4DM4|reactome:R-SCE-674695|reactome:R-SCE-75955	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	psi-mi:"MI:0469"(intact)	crc64:9580B53EEFB75345	-	figure legend:Supp. Fig 3|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:9d/PessN2v7cZ2ZuQW1vjTnjcaQ559292	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	intact-crc:E54497C21ABEF893|rigid:4PuO8GAUoFfImxZy6LjaRfL71Jg	false	zz tag:?-?|ha tag:?-?	flag tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P89105	uniprotkb:P38351	intact:EBI-5283|uniprotkb:O14409|uniprotkb:Q07332|uniprotkb:Q08292|uniprotkb:D6W1S4|ensemblfungi:YOL145C	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	psi-mi:ctr9_yeast(display_long)|uniprotkb:CTR9(gene name)|psi-mi:CTR9(display_short)|uniprotkb:CDP1(gene name synonym)|uniprotkb:Cln three-requiring protein 9(gene name synonym)|uniprotkb:Centromere-binding factor 1-dependent protein 1(gene name synonym)|uniprotkb:YOL145C(locus name)	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952842|imex:IM-15753-17	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_014496.2|sgd:S000005505|dip:DIP-2814N|mint:P89105|ensemblfungi:YOL145C(gene)|ensemblfungi:YOL145C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0035327"|go:"GO:0045142"(triplex DNA binding)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0060260"(regulation of transcription initiation from RNA polymerase II promoter)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR031101|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	psi-mi:"MI:0469"(intact)	crc64:F794ECBAD26D4820	-	figure legend:Fig 3C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:85qAqldtQL8T7JBgNxrvAYtHhd0559292	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	intact-crc:1A0459EC71E1A889|rigid:pikMUH6LKNJLyAa0nKXsH4fyOP4	false	ha tag:?-?|zz tag:?-?	flag tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38351	uniprotkb:P53064	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	intact:EBI-16303|uniprotkb:P89115|ensemblfungi:YGL244W|uniprotkb:D6VV91	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:rtf1_yeast(display_long)|uniprotkb:RTF1(gene name)|psi-mi:RTF1(display_short)|uniprotkb:YGL244W(locus name)|uniprotkb:HRA458(orf name)|uniprotkb:CSL3(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952852|imex:IM-15753-16	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001160"(regulation of histone H3-K79 methylation)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR004343(Plus-3)|interpro:IPR036128|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|rcsb pdb:5E8B|go:"GO:0034402"(recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex)|go:"GO:0035327"|go:"GO:0042138"(meiotic DNA double-strand break formation)|rcsb pdb:5EMX|ensemblfungi:YGL244W(gene)|ensemblfungi:YGL244W_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_011270.1|sgd:S000003213|dip:DIP-4065N|mint:P53064	psi-mi:"MI:0469"(intact)	-	crc64:13AECCEC6D63CED4	figure legend:Fig 3C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	rogid:jPawNxTgh9wPA5Uxbn5QCUeDw9Q559292	intact-crc:1F605E9B7045780F|rigid:dKavp1gKbYJRsRvSTuHxtnLPVlA	false	flag tag:?-?	zz tag:?-?|ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38439	uniprotkb:P38351	intact:EBI-10108|uniprotkb:D6W2I1|ensemblfungi:YOR123C	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	psi-mi:leo1_yeast(display_long)|uniprotkb:O3278(orf name)|uniprotkb:YOR3278C(orf name)|uniprotkb:YOR123C(locus name)|uniprotkb:LEO1(gene name)|psi-mi:LEO1(display_short)	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952832|imex:IM-15753-15	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_014766.1|sgd:S000005649|ensemblfungi:YOR123C(gene)|ensemblfungi:YOR123C_mRNA(transcript)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0006325"(chromatin organization)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0080182"(histone H3-K4 trimethylation)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR007149(Leo1-like protein)|go:"GO:0005634"(nucleus)|reactome:R-SCE-674695|reactome:R-SCE-75955|dip:DIP-4143N|mint:P38439	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	psi-mi:"MI:0469"(intact)	crc64:ABDE3D7D5A2C78A5	-	figure legend:Supp. Fig 3|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:qhB5pVP3l4WqXtp3JhmPsxEVHE0559292	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	intact-crc:829A6FD3C6D5B6BE|rigid:XGB+5KYyl7Aheo2wToGT2j4PChs	false	ha tag:?-?|zz tag:?-?	flag tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q02336	uniprotkb:Q00772	intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name)	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952721|imex:IM-15753-8	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	psi-mi:"MI:0469"(intact)	crc64:9637E1EDBBED0AC3	crc64:559A3E0D3EBDE5F9	figure legend:Supp Fig. 2A|comment:Interaction not observed inrim1-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	intact-crc:0C463A5AA16FFE91|rigid:8CoX5L4BkEM8H27I+YXH4oxeE4I	false	ha tag:?-?	flag tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P53064	uniprotkb:P38351	intact:EBI-16303|uniprotkb:P89115|ensemblfungi:YGL244W|uniprotkb:D6VV91	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	psi-mi:rtf1_yeast(display_long)|uniprotkb:RTF1(gene name)|psi-mi:RTF1(display_short)|uniprotkb:YGL244W(locus name)|uniprotkb:HRA458(orf name)|uniprotkb:CSL3(gene name synonym)	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952812|imex:IM-15753-13	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001160"(regulation of histone H3-K79 methylation)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR004343(Plus-3)|interpro:IPR036128|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|rcsb pdb:5E8B|go:"GO:0034402"(recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex)|go:"GO:0035327"|go:"GO:0042138"(meiotic DNA double-strand break formation)|rcsb pdb:5EMX|ensemblfungi:YGL244W(gene)|ensemblfungi:YGL244W_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_011270.1|sgd:S000003213|dip:DIP-4065N|mint:P53064	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	psi-mi:"MI:0469"(intact)	crc64:13AECCEC6D63CED4	-	figure legend:Fig 3C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:jPawNxTgh9wPA5Uxbn5QCUeDw9Q559292	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	intact-crc:B2409D4F16F2B4A3|rigid:BVP/EYhn0s6tuJf9vIhcL+oUMd4	false	-	zz tag:?-?|ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P53064	uniprotkb:Q00772	intact:EBI-16303|uniprotkb:P89115|ensemblfungi:YGL244W|uniprotkb:D6VV91	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	psi-mi:rtf1_yeast(display_long)|uniprotkb:RTF1(gene name)|psi-mi:RTF1(display_short)|uniprotkb:YGL244W(locus name)|uniprotkb:HRA458(orf name)|uniprotkb:CSL3(gene name synonym)	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952812|imex:IM-15753-13	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001160"(regulation of histone H3-K79 methylation)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR004343(Plus-3)|interpro:IPR036128|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|rcsb pdb:5E8B|go:"GO:0034402"(recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex)|go:"GO:0035327"|go:"GO:0042138"(meiotic DNA double-strand break formation)|rcsb pdb:5EMX|ensemblfungi:YGL244W(gene)|ensemblfungi:YGL244W_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_011270.1|sgd:S000003213|dip:DIP-4065N|mint:P53064	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	psi-mi:"MI:0469"(intact)	crc64:13AECCEC6D63CED4	crc64:559A3E0D3EBDE5F9	figure legend:Fig 3C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:jPawNxTgh9wPA5Uxbn5QCUeDw9Q559292	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	intact-crc:B2409D4F16F2B4A3|rigid:BVP/EYhn0s6tuJf9vIhcL+oUMd4	false	-	-	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P89105	uniprotkb:Q00772	intact:EBI-5283|uniprotkb:O14409|uniprotkb:Q07332|uniprotkb:Q08292|uniprotkb:D6W1S4|ensemblfungi:YOL145C	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	psi-mi:ctr9_yeast(display_long)|uniprotkb:CTR9(gene name)|psi-mi:CTR9(display_short)|uniprotkb:CDP1(gene name synonym)|uniprotkb:Cln three-requiring protein 9(gene name synonym)|uniprotkb:Centromere-binding factor 1-dependent protein 1(gene name synonym)|uniprotkb:YOL145C(locus name)	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952782|imex:IM-15753-12	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_014496.2|sgd:S000005505|dip:DIP-2814N|mint:P89105|ensemblfungi:YOL145C(gene)|ensemblfungi:YOL145C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0035327"|go:"GO:0045142"(triplex DNA binding)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0060260"(regulation of transcription initiation from RNA polymerase II promoter)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR031101|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	psi-mi:"MI:0469"(intact)	crc64:F794ECBAD26D4820	crc64:559A3E0D3EBDE5F9	figure legend:Fig 3C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:85qAqldtQL8T7JBgNxrvAYtHhd0559292	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	intact-crc:0B8B9E2A7C9EE9C4|rigid:q0pMnhvdiPQeQoFE346uwiDwdHE	false	ha tag:?-?|zz tag:?-?	flag tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P89105	uniprotkb:P38351	intact:EBI-5283|uniprotkb:O14409|uniprotkb:Q07332|uniprotkb:Q08292|uniprotkb:D6W1S4|ensemblfungi:YOL145C	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	psi-mi:ctr9_yeast(display_long)|uniprotkb:CTR9(gene name)|psi-mi:CTR9(display_short)|uniprotkb:CDP1(gene name synonym)|uniprotkb:Cln three-requiring protein 9(gene name synonym)|uniprotkb:Centromere-binding factor 1-dependent protein 1(gene name synonym)|uniprotkb:YOL145C(locus name)	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952782|imex:IM-15753-12	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_014496.2|sgd:S000005505|dip:DIP-2814N|mint:P89105|ensemblfungi:YOL145C(gene)|ensemblfungi:YOL145C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0035327"|go:"GO:0045142"(triplex DNA binding)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0060260"(regulation of transcription initiation from RNA polymerase II promoter)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR031101|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	psi-mi:"MI:0469"(intact)	crc64:F794ECBAD26D4820	-	figure legend:Fig 3C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:85qAqldtQL8T7JBgNxrvAYtHhd0559292	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	intact-crc:0B8B9E2A7C9EE9C4|rigid:q0pMnhvdiPQeQoFE346uwiDwdHE	false	ha tag:?-?|zz tag:?-?	necessary binding region:97-100	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38439	uniprotkb:P38351	intact:EBI-10108|uniprotkb:D6W2I1|ensemblfungi:YOR123C	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	psi-mi:leo1_yeast(display_long)|uniprotkb:O3278(orf name)|uniprotkb:YOR3278C(orf name)|uniprotkb:YOR123C(locus name)|uniprotkb:LEO1(gene name)|psi-mi:LEO1(display_short)	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952799|imex:IM-15753-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_014766.1|sgd:S000005649|ensemblfungi:YOR123C(gene)|ensemblfungi:YOR123C_mRNA(transcript)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0006325"(chromatin organization)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0080182"(histone H3-K4 trimethylation)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR007149(Leo1-like protein)|go:"GO:0005634"(nucleus)|reactome:R-SCE-674695|reactome:R-SCE-75955|dip:DIP-4143N|mint:P38439	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	psi-mi:"MI:0469"(intact)	crc64:ABDE3D7D5A2C78A5	-	figure legend:Fig 3C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:qhB5pVP3l4WqXtp3JhmPsxEVHE0559292	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	intact-crc:46D7E1FAC19F597F|rigid:yb5YtAmC2mSm5LC/acH+G230/zc	false	ha tag:?-?|zz tag:?-?	-	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38439	uniprotkb:Q00772	intact:EBI-10108|uniprotkb:D6W2I1|ensemblfungi:YOR123C	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	psi-mi:leo1_yeast(display_long)|uniprotkb:O3278(orf name)|uniprotkb:YOR3278C(orf name)|uniprotkb:YOR123C(locus name)|uniprotkb:LEO1(gene name)|psi-mi:LEO1(display_short)	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952799|imex:IM-15753-11	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_014766.1|sgd:S000005649|ensemblfungi:YOR123C(gene)|ensemblfungi:YOR123C_mRNA(transcript)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0006325"(chromatin organization)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0080182"(histone H3-K4 trimethylation)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR007149(Leo1-like protein)|go:"GO:0005634"(nucleus)|reactome:R-SCE-674695|reactome:R-SCE-75955|dip:DIP-4143N|mint:P38439	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	psi-mi:"MI:0469"(intact)	crc64:ABDE3D7D5A2C78A5	crc64:559A3E0D3EBDE5F9	figure legend:Fig 3C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:qhB5pVP3l4WqXtp3JhmPsxEVHE0559292	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	intact-crc:46D7E1FAC19F597F|rigid:yb5YtAmC2mSm5LC/acH+G230/zc	false	ha tag:?-?|zz tag:?-?	-	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P38351	uniprotkb:Q00772	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952679|imex:IM-15753-10	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	psi-mi:"MI:0469"(intact)	-	crc64:559A3E0D3EBDE5F9	figure legend:Figs. 2A-C, 3B|agonist:Cell wall stress|comment:Interaction not observed in swi4-/- or swi6-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	intact-crc:2C705EB2132EA478|rigid:R9ejUwa3tKq1eRFvzDQeisxHwBw	false	flag tag:?-?|necessary binding region:97-100|mutation decreasing interaction:191-191,193-193	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q03330	uniprotkb:Q00772	intact:EBI-7458|uniprotkb:Q6B165|uniprotkb:D6VV32|ensemblfungi:YGR252W	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	psi-mi:gcn5_yeast(display_long)|uniprotkb:YGR252W(locus name)|uniprotkb:GCN5(gene name)|psi-mi:GCN5(display_short)|uniprotkb:ADA4(gene name synonym)|uniprotkb:SWI9(gene name synonym)	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952731|imex:IM-15753-9	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_011768.1|sgd:S000003484|mint:Q03330|dip:DIP-710N|ensemblfungi:YGR252W(gene)|ensemblfungi:YGR252W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000775"(chromosome, centromeric region)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0004402"(histone acetyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0010484"(H3 histone acetyltransferase activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0140068"(histone crotonyltransferase activity)|interpro:IPR000182(GCN5-related N-acetyltransferase)|interpro:IPR001487(Bromodomain)|interpro:IPR016181(Acyl-CoA N-acyltransferase)|interpro:IPR018359|interpro:IPR036427|interpro:IPR037800|rcsb pdb:1E6I|rcsb pdb:1YGH|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880|reactome:R-SCE-9018519	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	psi-mi:"MI:0469"(intact)	crc64:3200730DDC7EF70D	crc64:559A3E0D3EBDE5F9	figure legend:Supp Fig. 2B|comment:Interaction not observed inrim1-/- cells|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:Y8SHidiW4dJo0oxEDksur8MC/L0559292	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	intact-crc:6B3DCD08D5F3768E|rigid:JqlrzWM9karc1FYw05636nf6mFs	false	ha tag:?-?	-	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q06697	uniprotkb:Q00772	intact:EBI-29913|uniprotkb:D6VZ54|ensemblfungi:YLR418C	intact:EBI-17372|uniprotkb:D3DKX7|ensemblfungi:YHR030C	psi-mi:cdc73_yeast(display_long)|uniprotkb:RNA polymerase-associated protein CDC73(gene name synonym)|uniprotkb:CDC73(gene name)|psi-mi:CDC73(display_short)|uniprotkb:YLR418C(locus name)	psi-mi:slt2_yeast(display_long)|uniprotkb:YHR030C(locus name)|uniprotkb:SLT2(gene name)|psi-mi:SLT2(display_short)|uniprotkb:MPK1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952762|imex:IM-15753-14	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013522.1|sgd:S000004410|dip:DIP-1148N|mint:Q06697|ensemblfungi:YLR418C(gene)|ensemblfungi:YLR418C_mRNA(transcript)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034402"(recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007852(RNA polymerase II accessory factor, Cdc73)|interpro:IPR031336|interpro:IPR038103|rcsb pdb:3V46|rcsb pdb:4DM4|reactome:R-SCE-674695|reactome:R-SCE-75955	refseq:NP_011895.1|sgd:S000001072|ensemblfungi:YHR030C(gene)|ensemblfungi:YHR030C_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0008361"(regulation of cell size)|go:"GO:0009272"(fungal-type cell wall biogenesis)|go:"GO:0010447"(response to acidic pH)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0042306"(regulation of protein import into nucleus)|go:"GO:0043332"(mating projection tip)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0060256"(regulation of flocculation)|go:"GO:0090364"(regulation of proteasome assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-881907|dip:DIP-1448N|reactome:R-SCE-198765|reactome:R-SCE-4086398	psi-mi:"MI:0469"(intact)	crc64:9580B53EEFB75345	crc64:559A3E0D3EBDE5F9	figure legend:Fig 3C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:9d/PessN2v7cZ2ZuQW1vjTnjcaQ559292	rogid:1dJe7ldR8bi2mbvPugrkZAHrrVw559292	intact-crc:63B6D7B8BDBCA242|rigid:Q1ZyjWklT9mVJueiiVXtghYkwhM	false	zz tag:?-?|ha tag:?-?	flag tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q06697	uniprotkb:P38351	intact:EBI-29913|uniprotkb:D6VZ54|ensemblfungi:YLR418C	intact:EBI-12855|uniprotkb:Q9URC9|uniprotkb:D6VQS4|ensemblfungi:YBR279W	psi-mi:cdc73_yeast(display_long)|uniprotkb:RNA polymerase-associated protein CDC73(gene name synonym)|uniprotkb:CDC73(gene name)|psi-mi:CDC73(display_short)|uniprotkb:YLR418C(locus name)	psi-mi:paf1_yeast(display_long)|uniprotkb:PAF1(gene name)|psi-mi:PAF1(display_short)|uniprotkb:YBR279W(locus name)|uniprotkb:YBR2016(orf name)|uniprotkb:Protein PAF1(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kim et al. (2011)	pubmed:21376235|imex:IM-15753	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-3952762|imex:IM-15753-14	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_013522.1|sgd:S000004410|dip:DIP-1148N|mint:Q06697|ensemblfungi:YLR418C(gene)|ensemblfungi:YLR418C_mRNA(transcript)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034402"(recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007852(RNA polymerase II accessory factor, Cdc73)|interpro:IPR031336|interpro:IPR038103|rcsb pdb:3V46|rcsb pdb:4DM4|reactome:R-SCE-674695|reactome:R-SCE-75955	ensemblfungi:YBR279W(gene)|ensemblfungi:YBR279W_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0001015"(snoRNA transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006362"(transcription elongation from RNA polymerase I promoter)|go:"GO:0006364"(rRNA processing)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006383"(transcription by RNA polymerase III)|go:"GO:0016570"(histone modification)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0031126"("sno(s)RNA 3'-end processing")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035327"|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0070911"(global genome nucleotide-excision repair)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:1990269"(RNA polymerase II C-terminal domain phosphoserine binding)|go:"GO:2001163"(regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001165"(positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues)|go:"GO:2001166"(regulation of histone H2B ubiquitination)|go:"GO:2001173"(regulation of histone H2B conserved C-terminal lysine ubiquitination)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:2001255"(positive regulation of histone H3-K36 trimethylation)|interpro:IPR007133(RNA polymerase II-associated, Paf1)|rcsb pdb:5ZYP|reactome:R-SCE-674695|reactome:R-SCE-75955|refseq:NP_009838.1|sgd:S000000483|mint:P38351|dip:DIP-1149N	psi-mi:"MI:0469"(intact)	crc64:9580B53EEFB75345	-	figure legend:Fig 3C|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2011/05/25	2014/10/16	rogid:9d/PessN2v7cZ2ZuQW1vjTnjcaQ559292	rogid:k4kVCyYuA4w4+4OEroTkwhbxs6Q559292	intact-crc:63B6D7B8BDBCA242|rigid:Q1ZyjWklT9mVJueiiVXtghYkwhM	false	zz tag:?-?|ha tag:?-?	necessary binding region:97-100	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)