#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:P39081	uniprotkb:Q08685	intact:EBI-12980|uniprotkb:Q04932|uniprotkb:D6VSL0|ensemblfungi:YDR228C	intact:EBI-29732|uniprotkb:D6W2V1|ensemblfungi:YOR250C	psi-mi:pcf11_yeast(display_long)|uniprotkb:PCF11(gene name)|psi-mi:PCF11(display_short)|uniprotkb:YDR228C(locus name)|uniprotkb:YD9934.13C(orf name)|uniprotkb:protein 1 of CF I(gene name synonym)	psi-mi:clp1_yeast(display_long)|uniprotkb:CLP1(gene name)|psi-mi:CLP1(display_short)|uniprotkb:YOR250C(locus name)	psi-mi:"MI:0114"(x-ray crystallography)	Noble et al. (2007)	pubmed:17151076|imex:IM-16852	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0407"(direct interaction)	psi-mi:"MI:0486"(UniProt)	intact:EBI-3649111|wwpdb:2npi|imex:IM-16852-1	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000002636|ensemblfungi:YDR228C(gene)|ensemblfungi:YDR228C_mRNA(transcript)|refseq:NP_010514.3|go:"GO:0000993"(RNA polymerase II complex binding)|dip:DIP-944N|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0030846"("termination of RNA polymerase II transcription, poly(A)-coupled")|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR021605|rcsb pdb:1SZ9|rcsb pdb:1SZA|rcsb pdb:2BF0|rcsb pdb:2NAX|rcsb pdb:2NPI|rcsb pdb:4C0B|rcsb pdb:4C0H|rcsb pdb:4OI4|rcsb pdb:5M9Z	refseq:NP_014893.1|sgd:S000005776|dip:DIP-1487N|mint:Q08685|ensemblfungi:YOR250C(gene)|ensemblfungi:YOR250C_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0006388"(tRNA splicing, via endonucleolytic cleavage and ligation)|go:"GO:0006396"(RNA processing)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0051731"(polynucleotide 5'-hydroxyl-kinase activity)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR010655(Pre-mRNA cleavage complex II Clp1)|interpro:IPR027417|interpro:IPR028606|interpro:IPR032319|interpro:IPR032324|interpro:IPR038238|interpro:IPR038239|rcsb pdb:2NPI|rcsb pdb:4C0B|rcsb pdb:4C0H|rcsb pdb:4OI4	-	crc64:66F91BA9577E82F1	crc64:B00F7659E83090DA	3d-resolution:2.95 A|3d-r-factors:R-value 0.250  R-free 0.303|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2011/03/02	2014/10/16	rogid:NT0NGp2ly1eBgnP0a3SbaAxU0ok559292	rogid:WiC5KIjGJ6qTn+XuPdCL9J/eYeo559292	intact-crc:67110F4B5FAE8F8C|rigid:H/LbnMks0Zmajvv8dl33rWynUJ0	false	sufficient binding region:454-563	-	1	1	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
chebi:"CHEBI:15422"	uniprotkb:Q08685	intact:EBI-1108845|chebi:"CHEBI:40938"|chebi:"CHEBI:10841"|chebi:"CHEBI:10789"|chebi:"CHEBI:2359"|chebi:"CHEBI:13236"|chebi:"CHEBI:22249"	intact:EBI-29732|uniprotkb:D6W2V1|ensemblfungi:YOR250C	psi-mi:atp(display_short)|psi-mi:"CHEBI:15422"(display_long)|intact:Adenosine 5'-triphosphate(synonym)|intact:Adenosine triphosphate(synonym)|intact:ADENOSINE-5'-TRIPHOSPHATE(synonym)|intact:Adephos(synonym)|intact:Adetol(synonym)|intact:Adynol(synonym)|intact:Atipi(synonym)|intact:ATP(synonym)|intact:Atriphos(synonym)|intact:Cardenosine(synonym)|intact:Fosfobion(synonym)|intact:Glucobasin(synonym)|intact:H4atp(synonym)|intact:Myotriphos(synonym)|intact:Triadenyl(synonym)|intact:Triphosphaden(synonym)|intact:"adenosine 5'-(tetrahydrogen triphosphate)"(iupac name)	psi-mi:clp1_yeast(display_long)|uniprotkb:CLP1(gene name)|psi-mi:CLP1(display_short)|uniprotkb:YOR250C(locus name)	psi-mi:"MI:0091"(chromatography technology)	Noble et al. (2007)	pubmed:17151076|imex:IM-16852	taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)")	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0407"(direct interaction)	psi-mi:"MI:0486"(UniProt)	intact:EBI-3649155|imex:IM-16852-3	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0328"(small molecule)	psi-mi:"MI:0326"(protein)	-	refseq:NP_014893.1|sgd:S000005776|dip:DIP-1487N|mint:Q08685|ensemblfungi:YOR250C(gene)|ensemblfungi:YOR250C_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0006388"(tRNA splicing, via endonucleolytic cleavage and ligation)|go:"GO:0006396"(RNA processing)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0051731"(polynucleotide 5'-hydroxyl-kinase activity)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR010655(Pre-mRNA cleavage complex II Clp1)|interpro:IPR027417|interpro:IPR028606|interpro:IPR032319|interpro:IPR032324|interpro:IPR038238|interpro:IPR038239|rcsb pdb:2NPI|rcsb pdb:4C0B|rcsb pdb:4C0H|rcsb pdb:4OI4	-	-	crc64:B00F7659E83090DA	figure legend:fig 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2011/03/02	2014/10/16	-	rogid:WiC5KIjGJ6qTn+XuPdCL9J/eYeo559292	intact-crc:50C8C630FDF7C980	false	-	-	1	1	psi-mi:"MI:0815"(confirmation by molecular weight)	psi-mi:"MI:0815"(confirmation by molecular weight)
chebi:"CHEBI:15422"	uniprotkb:Q08685	intact:EBI-1108845|chebi:"CHEBI:40938"|chebi:"CHEBI:10841"|chebi:"CHEBI:10789"|chebi:"CHEBI:2359"|chebi:"CHEBI:13236"|chebi:"CHEBI:22249"	intact:EBI-29732|uniprotkb:D6W2V1|ensemblfungi:YOR250C	psi-mi:atp(display_short)|psi-mi:"CHEBI:15422"(display_long)|intact:Adenosine 5'-triphosphate(synonym)|intact:Adenosine triphosphate(synonym)|intact:ADENOSINE-5'-TRIPHOSPHATE(synonym)|intact:Adephos(synonym)|intact:Adetol(synonym)|intact:Adynol(synonym)|intact:Atipi(synonym)|intact:ATP(synonym)|intact:Atriphos(synonym)|intact:Cardenosine(synonym)|intact:Fosfobion(synonym)|intact:Glucobasin(synonym)|intact:H4atp(synonym)|intact:Myotriphos(synonym)|intact:Triadenyl(synonym)|intact:Triphosphaden(synonym)|intact:"adenosine 5'-(tetrahydrogen triphosphate)"(iupac name)	psi-mi:clp1_yeast(display_long)|uniprotkb:CLP1(gene name)|psi-mi:CLP1(display_short)|uniprotkb:YOR250C(locus name)	psi-mi:"MI:0091"(chromatography technology)	Noble et al. (2007)	pubmed:17151076|imex:IM-16852	taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)")	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-3650828|imex:IM-16852-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0328"(small molecule)	psi-mi:"MI:0326"(protein)	-	refseq:NP_014893.1|sgd:S000005776|dip:DIP-1487N|mint:Q08685|ensemblfungi:YOR250C(gene)|ensemblfungi:YOR250C_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0006388"(tRNA splicing, via endonucleolytic cleavage and ligation)|go:"GO:0006396"(RNA processing)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0051731"(polynucleotide 5'-hydroxyl-kinase activity)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR010655(Pre-mRNA cleavage complex II Clp1)|interpro:IPR027417|interpro:IPR028606|interpro:IPR032319|interpro:IPR032324|interpro:IPR038238|interpro:IPR038239|rcsb pdb:2NPI|rcsb pdb:4C0B|rcsb pdb:4C0H|rcsb pdb:4OI4	-	-	crc64:B00F7659E83090DA	figure legend:fig 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2011/03/02	2014/10/16	-	rogid:WiC5KIjGJ6qTn+XuPdCL9J/eYeo559292	intact-crc:6C3E11C48A6112A6	false	-	-	1	1	psi-mi:"MI:0815"(confirmation by molecular weight)	psi-mi:"MI:0815"(confirmation by molecular weight)
chebi:"CHEBI:15422"	uniprotkb:P39081	intact:EBI-1108845|chebi:"CHEBI:40938"|chebi:"CHEBI:10841"|chebi:"CHEBI:10789"|chebi:"CHEBI:2359"|chebi:"CHEBI:13236"|chebi:"CHEBI:22249"	intact:EBI-12980|uniprotkb:Q04932|uniprotkb:D6VSL0|ensemblfungi:YDR228C	psi-mi:atp(display_short)|psi-mi:"CHEBI:15422"(display_long)|intact:Adenosine 5'-triphosphate(synonym)|intact:Adenosine triphosphate(synonym)|intact:ADENOSINE-5'-TRIPHOSPHATE(synonym)|intact:Adephos(synonym)|intact:Adetol(synonym)|intact:Adynol(synonym)|intact:Atipi(synonym)|intact:ATP(synonym)|intact:Atriphos(synonym)|intact:Cardenosine(synonym)|intact:Fosfobion(synonym)|intact:Glucobasin(synonym)|intact:H4atp(synonym)|intact:Myotriphos(synonym)|intact:Triadenyl(synonym)|intact:Triphosphaden(synonym)|intact:"adenosine 5'-(tetrahydrogen triphosphate)"(iupac name)	psi-mi:pcf11_yeast(display_long)|uniprotkb:PCF11(gene name)|psi-mi:PCF11(display_short)|uniprotkb:YDR228C(locus name)|uniprotkb:YD9934.13C(orf name)|uniprotkb:protein 1 of CF I(gene name synonym)	psi-mi:"MI:0091"(chromatography technology)	Noble et al. (2007)	pubmed:17151076|imex:IM-16852	taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)")	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-3650828|imex:IM-16852-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0328"(small molecule)	psi-mi:"MI:0326"(protein)	-	sgd:S000002636|ensemblfungi:YDR228C(gene)|ensemblfungi:YDR228C_mRNA(transcript)|refseq:NP_010514.3|go:"GO:0000993"(RNA polymerase II complex binding)|dip:DIP-944N|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0030846"("termination of RNA polymerase II transcription, poly(A)-coupled")|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR021605|rcsb pdb:1SZ9|rcsb pdb:1SZA|rcsb pdb:2BF0|rcsb pdb:2NAX|rcsb pdb:2NPI|rcsb pdb:4C0B|rcsb pdb:4C0H|rcsb pdb:4OI4|rcsb pdb:5M9Z	-	-	crc64:66F91BA9577E82F1	figure legend:fig 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2011/03/02	2014/10/16	-	rogid:NT0NGp2ly1eBgnP0a3SbaAxU0ok559292	intact-crc:6C3E11C48A6112A6	false	-	-	1	1	psi-mi:"MI:0815"(confirmation by molecular weight)	psi-mi:"MI:0815"(confirmation by molecular weight)