#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B intact:EBI-3959072 uniprotkb:Q9N3T2 - intact:EBI-318437|ensemblmetazoa:Y47G6A.8.1|ensemblmetazoa:Y47G6A.8.2 psi-mi:cttgaggcagagtcc(display_short)|psi-mi:EBI-3959072(display_long) psi-mi:fen1_caeel(display_long)|uniprotkb:Y47G6A.8(orf name)|uniprotkb:crn-1(gene name)|psi-mi:crn-1(display_short)|uniprotkb:Cell death-related nuclease 1(gene name synonym)|uniprotkb:Flap structure-specific endonuclease 1(gene name synonym) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:6239(caeel)|taxid:6239(Caenorhabditis elegans) psi-mi:"MI:0844"(phosphotransfer reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-3959151|imex:IM-16875-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0326"(protein) - refseq:NP_491168.1|wormbase:Y47G6A.8|reactome:R-CEL-69166|ensemblmetazoa:WBGene00000794(gene)|ensemblmetazoa:Y47G6A.8.1(transcript)|ensemblmetazoa:Y47G6A.8.2(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004523"(RNA-DNA hybrid ribonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006260"(DNA replication)|go:"GO:0006281"(DNA repair)|go:"GO:0006284"(base-excision repair)|go:"GO:0006309"(apoptotic DNA fragmentation)|go:"GO:0008409"(5'-3' exonuclease activity)|go:"GO:0017108"(5'-flap endonuclease activity)|go:"GO:0030145"(manganese ion binding)|go:"GO:0043137"(DNA replication, removal of RNA primer)|go:"GO:0048256"(flap endonuclease activity)|interpro:IPR006084("DNA repair protein (XPGC)/yeast Rad")|interpro:IPR006085(XPG N-terminal)|interpro:IPR006086(XPG I)|interpro:IPR008918(Helix-hairpin-helix motif, class 2)|interpro:IPR019974|interpro:IPR023426|interpro:IPR029060|interpro:IPR036279|reactome:R-CEL-5651801|dip:DIP-26974N|reactome:R-CEL-5685939 - - - figure legend:Fig 2D, 3D.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - rogid:T4RC9oK5ryCPQhp7SLqwnz+dQ/w6239 intact-crc:9124639BFACA1711 false - mutation disrupting interaction:233-234|mutation disrupting interaction:160-160 - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) intact:EBI-3959072 intact:EBI-3959069 - - psi-mi:cttgaggcagagtcc(display_short)|psi-mi:EBI-3959072(display_long) psi-mi:ggactctgcctcaagacggtagtcaacgtggtgtg(display_short)|psi-mi:EBI-3959069(display_long) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") psi-mi:"MI:0844"(phosphotransfer reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-3959151|imex:IM-16875-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0319"(deoxyribonucleic acid) - - - - - figure legend:Fig 2D, 3D.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - - intact-crc:9124639BFACA1711 false - - - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) intact:EBI-3959072 uniprotkb:Q95NM6 - intact:EBI-514727|ensemblmetazoa:C41D11.8.1 psi-mi:cttgaggcagagtcc(display_short)|psi-mi:EBI-3959072(display_long) psi-mi:nucg_caeel(display_long)|uniprotkb:Ced-3 protease suppressor 6(gene name synonym)|uniprotkb:cps-6(gene name)|psi-mi:cps-6(display_short)|uniprotkb:C41D11.8(orf name) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:6239(caeel)|taxid:6239(Caenorhabditis elegans) psi-mi:"MI:0844"(phosphotransfer reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-3959151|imex:IM-16875-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0840"(stimulator) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0326"(protein) - refseq:NP_491371.1|wormbase:C41D11.8|interpro:IPR018524|interpro:IPR001604(DNA/RNA non-specific endonuclease)|interpro:IPR020821|ensemblmetazoa:C41D11.8.1(transcript)|ensemblmetazoa:WBGene00000787(gene)|go:"GO:0000014"(single-stranded DNA endodeoxyribonuclease activity)|go:"GO:0000737"(DNA catabolic process, endonucleolytic)|go:"GO:0004519"(endonuclease activity)|go:"GO:0004520"(endodeoxyribonuclease activity)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0006309"(apoptotic DNA fragmentation)|go:"GO:0006401"(RNA catabolic process)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:5GKC|rcsb pdb:5GKP|rcsb pdb:3S5B|rcsb pdb:4QN0|interpro:IPR040255 - - - figure legend:Fig 2D, 3D.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - rogid:/Uve+VvpV/bNMZedVIvfebHjvwA6239 intact-crc:9124639BFACA1711 false - - - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) intact:EBI-3946149 intact:EBI-3959072 - - psi-mi:cacaccacgttgactaccgt_minus_1-4_nucleotides_at_3'_end(display_short)|psi-mi:EBI-3946149(display_long) psi-mi:cttgaggcagagtcc(display_short)|psi-mi:EBI-3959072(display_long) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-3959137|imex:IM-16875-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0319"(deoxyribonucleic acid) - - - - - figure legend:Fig 2C, 3D.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - - intact-crc:F61276D8D82E5A0C false - - - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) intact:EBI-3946149 uniprotkb:Q9N3T2 - intact:EBI-318437|ensemblmetazoa:Y47G6A.8.1|ensemblmetazoa:Y47G6A.8.2 psi-mi:cacaccacgttgactaccgt_minus_1-4_nucleotides_at_3'_end(display_short)|psi-mi:EBI-3946149(display_long) psi-mi:fen1_caeel(display_long)|uniprotkb:Y47G6A.8(orf name)|uniprotkb:crn-1(gene name)|psi-mi:crn-1(display_short)|uniprotkb:Cell death-related nuclease 1(gene name synonym)|uniprotkb:Flap structure-specific endonuclease 1(gene name synonym) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:6239(caeel)|taxid:6239(Caenorhabditis elegans) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-3959137|imex:IM-16875-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0326"(protein) - refseq:NP_491168.1|wormbase:Y47G6A.8|reactome:R-CEL-69166|ensemblmetazoa:WBGene00000794(gene)|ensemblmetazoa:Y47G6A.8.1(transcript)|ensemblmetazoa:Y47G6A.8.2(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004523"(RNA-DNA hybrid ribonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006260"(DNA replication)|go:"GO:0006281"(DNA repair)|go:"GO:0006284"(base-excision repair)|go:"GO:0006309"(apoptotic DNA fragmentation)|go:"GO:0008409"(5'-3' exonuclease activity)|go:"GO:0017108"(5'-flap endonuclease activity)|go:"GO:0030145"(manganese ion binding)|go:"GO:0043137"(DNA replication, removal of RNA primer)|go:"GO:0048256"(flap endonuclease activity)|interpro:IPR006084("DNA repair protein (XPGC)/yeast Rad")|interpro:IPR006085(XPG N-terminal)|interpro:IPR006086(XPG I)|interpro:IPR008918(Helix-hairpin-helix motif, class 2)|interpro:IPR019974|interpro:IPR023426|interpro:IPR029060|interpro:IPR036279|reactome:R-CEL-5651801|dip:DIP-26974N|reactome:R-CEL-5685939 - - - figure legend:Fig 2C, 3D.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - rogid:T4RC9oK5ryCPQhp7SLqwnz+dQ/w6239 intact-crc:F61276D8D82E5A0C false - mutation decreasing interaction:160-160|mutation disrupting interaction:233-234 - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) intact:EBI-3946149 intact:EBI-3959069 - - psi-mi:cacaccacgttgactaccgt_minus_1-4_nucleotides_at_3'_end(display_short)|psi-mi:EBI-3946149(display_long) psi-mi:ggactctgcctcaagacggtagtcaacgtggtgtg(display_short)|psi-mi:EBI-3959069(display_long) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-3959137|imex:IM-16875-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0319"(deoxyribonucleic acid) - - - - - figure legend:Fig 2C, 3D.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - - intact-crc:F61276D8D82E5A0C false - - - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) intact:EBI-3946149 uniprotkb:Q95NM6 - intact:EBI-514727|ensemblmetazoa:C41D11.8.1 psi-mi:cacaccacgttgactaccgt_minus_1-4_nucleotides_at_3'_end(display_short)|psi-mi:EBI-3946149(display_long) psi-mi:nucg_caeel(display_long)|uniprotkb:Ced-3 protease suppressor 6(gene name synonym)|uniprotkb:cps-6(gene name)|psi-mi:cps-6(display_short)|uniprotkb:C41D11.8(orf name) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:6239(caeel)|taxid:6239(Caenorhabditis elegans) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-3959137|imex:IM-16875-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0840"(stimulator) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0326"(protein) - refseq:NP_491371.1|wormbase:C41D11.8|interpro:IPR018524|interpro:IPR001604(DNA/RNA non-specific endonuclease)|interpro:IPR020821|ensemblmetazoa:C41D11.8.1(transcript)|ensemblmetazoa:WBGene00000787(gene)|go:"GO:0000014"(single-stranded DNA endodeoxyribonuclease activity)|go:"GO:0000737"(DNA catabolic process, endonucleolytic)|go:"GO:0004519"(endonuclease activity)|go:"GO:0004520"(endodeoxyribonuclease activity)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0006309"(apoptotic DNA fragmentation)|go:"GO:0006401"(RNA catabolic process)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:5GKC|rcsb pdb:5GKP|rcsb pdb:3S5B|rcsb pdb:4QN0|interpro:IPR040255 - - - figure legend:Fig 2C, 3D.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - rogid:/Uve+VvpV/bNMZedVIvfebHjvwA6239 intact-crc:F61276D8D82E5A0C false - - - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) intact:EBI-3946149 intact:EBI-3959072 - - psi-mi:cacaccacgttgactaccgt_minus_1-4_nucleotides_at_3'_end(display_short)|psi-mi:EBI-3946149(display_long) psi-mi:cttgaggcagagtcc(display_short)|psi-mi:EBI-3959072(display_long) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-3946053|imex:IM-16875-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0319"(deoxyribonucleic acid) - - - - - figure legend:Fig 2C, 3C.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - - intact-crc:6E91F92C077F92D3 false - - - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) intact:EBI-3946149 uniprotkb:Q9N3T2 - intact:EBI-318437|ensemblmetazoa:Y47G6A.8.1|ensemblmetazoa:Y47G6A.8.2 psi-mi:cacaccacgttgactaccgt_minus_1-4_nucleotides_at_3'_end(display_short)|psi-mi:EBI-3946149(display_long) psi-mi:fen1_caeel(display_long)|uniprotkb:Y47G6A.8(orf name)|uniprotkb:crn-1(gene name)|psi-mi:crn-1(display_short)|uniprotkb:Cell death-related nuclease 1(gene name synonym)|uniprotkb:Flap structure-specific endonuclease 1(gene name synonym) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:6239(caeel)|taxid:6239(Caenorhabditis elegans) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-3946053|imex:IM-16875-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0326"(protein) - refseq:NP_491168.1|wormbase:Y47G6A.8|reactome:R-CEL-69166|ensemblmetazoa:WBGene00000794(gene)|ensemblmetazoa:Y47G6A.8.1(transcript)|ensemblmetazoa:Y47G6A.8.2(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004523"(RNA-DNA hybrid ribonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006260"(DNA replication)|go:"GO:0006281"(DNA repair)|go:"GO:0006284"(base-excision repair)|go:"GO:0006309"(apoptotic DNA fragmentation)|go:"GO:0008409"(5'-3' exonuclease activity)|go:"GO:0017108"(5'-flap endonuclease activity)|go:"GO:0030145"(manganese ion binding)|go:"GO:0043137"(DNA replication, removal of RNA primer)|go:"GO:0048256"(flap endonuclease activity)|interpro:IPR006084("DNA repair protein (XPGC)/yeast Rad")|interpro:IPR006085(XPG N-terminal)|interpro:IPR006086(XPG I)|interpro:IPR008918(Helix-hairpin-helix motif, class 2)|interpro:IPR019974|interpro:IPR023426|interpro:IPR029060|interpro:IPR036279|reactome:R-CEL-5651801|dip:DIP-26974N|reactome:R-CEL-5685939 - - - figure legend:Fig 2C, 3C.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - rogid:T4RC9oK5ryCPQhp7SLqwnz+dQ/w6239 intact-crc:6E91F92C077F92D3 false - mutation decreasing interaction:160-160|mutation disrupting interaction:233-234 - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) intact:EBI-3946149 intact:EBI-3959069 - - psi-mi:cacaccacgttgactaccgt_minus_1-4_nucleotides_at_3'_end(display_short)|psi-mi:EBI-3946149(display_long) psi-mi:ggactctgcctcaagacggtagtcaacgtggtgtg(display_short)|psi-mi:EBI-3959069(display_long) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-3946053|imex:IM-16875-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0319"(deoxyribonucleic acid) - - - - - figure legend:Fig 2C, 3C.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - - intact-crc:6E91F92C077F92D3 false - - - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) intact:EBI-3946149 uniprotkb:Q95NM6 - intact:EBI-514727|ensemblmetazoa:C41D11.8.1 psi-mi:cacaccacgttgactaccgt_minus_1-4_nucleotides_at_3'_end(display_short)|psi-mi:EBI-3946149(display_long) psi-mi:nucg_caeel(display_long)|uniprotkb:Ced-3 protease suppressor 6(gene name synonym)|uniprotkb:cps-6(gene name)|psi-mi:cps-6(display_short)|uniprotkb:C41D11.8(orf name) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:6239(caeel)|taxid:6239(Caenorhabditis elegans) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-3946053|imex:IM-16875-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0840"(stimulator) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0326"(protein) - refseq:NP_491371.1|wormbase:C41D11.8|interpro:IPR018524|interpro:IPR001604(DNA/RNA non-specific endonuclease)|interpro:IPR020821|ensemblmetazoa:C41D11.8.1(transcript)|ensemblmetazoa:WBGene00000787(gene)|go:"GO:0000014"(single-stranded DNA endodeoxyribonuclease activity)|go:"GO:0000737"(DNA catabolic process, endonucleolytic)|go:"GO:0004519"(endonuclease activity)|go:"GO:0004520"(endodeoxyribonuclease activity)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0006309"(apoptotic DNA fragmentation)|go:"GO:0006401"(RNA catabolic process)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:5GKC|rcsb pdb:5GKP|rcsb pdb:3S5B|rcsb pdb:4QN0|interpro:IPR040255 - - - figure legend:Fig 2C, 3C.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - rogid:/Uve+VvpV/bNMZedVIvfebHjvwA6239 intact-crc:6E91F92C077F92D3 false - - - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) intact:EBI-3959168 uniprotkb:Q9N3T2 - intact:EBI-318437|ensemblmetazoa:Y47G6A.8.1|ensemblmetazoa:Y47G6A.8.2 psi-mi:cacgttgactaccgtc(display_short)|psi-mi:EBI-3959168(display_long) psi-mi:fen1_caeel(display_long)|uniprotkb:Y47G6A.8(orf name)|uniprotkb:crn-1(gene name)|psi-mi:crn-1(display_short)|uniprotkb:Cell death-related nuclease 1(gene name synonym)|uniprotkb:Flap structure-specific endonuclease 1(gene name synonym) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:6239(caeel)|taxid:6239(Caenorhabditis elegans) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-3946137|imex:IM-16875-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0326"(protein) - refseq:NP_491168.1|wormbase:Y47G6A.8|reactome:R-CEL-69166|ensemblmetazoa:WBGene00000794(gene)|ensemblmetazoa:Y47G6A.8.1(transcript)|ensemblmetazoa:Y47G6A.8.2(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004523"(RNA-DNA hybrid ribonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006260"(DNA replication)|go:"GO:0006281"(DNA repair)|go:"GO:0006284"(base-excision repair)|go:"GO:0006309"(apoptotic DNA fragmentation)|go:"GO:0008409"(5'-3' exonuclease activity)|go:"GO:0017108"(5'-flap endonuclease activity)|go:"GO:0030145"(manganese ion binding)|go:"GO:0043137"(DNA replication, removal of RNA primer)|go:"GO:0048256"(flap endonuclease activity)|interpro:IPR006084("DNA repair protein (XPGC)/yeast Rad")|interpro:IPR006085(XPG N-terminal)|interpro:IPR006086(XPG I)|interpro:IPR008918(Helix-hairpin-helix motif, class 2)|interpro:IPR019974|interpro:IPR023426|interpro:IPR029060|interpro:IPR036279|reactome:R-CEL-5651801|dip:DIP-26974N|reactome:R-CEL-5685939 - - - figure legend:Fig 2B|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - rogid:T4RC9oK5ryCPQhp7SLqwnz+dQ/w6239 intact-crc:09EA253BC064B13F false - mutation decreasing interaction:160-160|mutation disrupting interaction:233-234 - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) intact:EBI-3959168 intact:EBI-3946067 - - psi-mi:cacgttgactaccgtc(display_short)|psi-mi:EBI-3959168(display_long) psi-mi:gatgtcaagcagtcctaactttgaggcagtcc(display_short)|psi-mi:EBI-3946067(display_long) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-3946137|imex:IM-16875-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0319"(deoxyribonucleic acid) - - - - - figure legend:Fig 2B|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - - intact-crc:09EA253BC064B13F false - - - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) intact:EBI-3959168 intact:EBI-3959164 - - psi-mi:cacgttgactaccgtc(display_short)|psi-mi:EBI-3959168(display_long) psi-mi:ggactctgcctcaagacggtagtcaacgtg(display_short)|psi-mi:EBI-3959164(display_long) psi-mi:"MI:0415"(enzymatic study) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-3946137|imex:IM-16875-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0319"(deoxyribonucleic acid) psi-mi:"MI:0319"(deoxyribonucleic acid) - - - - - figure legend:Fig 2B|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 - - intact-crc:09EA253BC064B13F false - - - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) uniprotkb:Q9N3T2 uniprotkb:Q95NM6 intact:EBI-318437|ensemblmetazoa:Y47G6A.8.1|ensemblmetazoa:Y47G6A.8.2 intact:EBI-514727|ensemblmetazoa:C41D11.8.1 psi-mi:fen1_caeel(display_long)|uniprotkb:Y47G6A.8(orf name)|uniprotkb:crn-1(gene name)|psi-mi:crn-1(display_short)|uniprotkb:Cell death-related nuclease 1(gene name synonym)|uniprotkb:Flap structure-specific endonuclease 1(gene name synonym) psi-mi:nucg_caeel(display_long)|uniprotkb:Ced-3 protease suppressor 6(gene name synonym)|uniprotkb:cps-6(gene name)|psi-mi:cps-6(display_short)|uniprotkb:C41D11.8(orf name) psi-mi:"MI:0096"(pull down) Parrish et al. (2003) pubmed:12840007|imex:IM-16875 taxid:6239(caeel)|taxid:6239(Caenorhabditis elegans) taxid:6239(caeel)|taxid:6239(Caenorhabditis elegans) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-3946017|imex:IM-16875-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_491168.1|wormbase:Y47G6A.8|reactome:R-CEL-69166|ensemblmetazoa:WBGene00000794(gene)|ensemblmetazoa:Y47G6A.8.1(transcript)|ensemblmetazoa:Y47G6A.8.2(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004523"(RNA-DNA hybrid ribonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006260"(DNA replication)|go:"GO:0006281"(DNA repair)|go:"GO:0006284"(base-excision repair)|go:"GO:0006309"(apoptotic DNA fragmentation)|go:"GO:0008409"(5'-3' exonuclease activity)|go:"GO:0017108"(5'-flap endonuclease activity)|go:"GO:0030145"(manganese ion binding)|go:"GO:0043137"(DNA replication, removal of RNA primer)|go:"GO:0048256"(flap endonuclease activity)|interpro:IPR006084("DNA repair protein (XPGC)/yeast Rad")|interpro:IPR006085(XPG N-terminal)|interpro:IPR006086(XPG I)|interpro:IPR008918(Helix-hairpin-helix motif, class 2)|interpro:IPR019974|interpro:IPR023426|interpro:IPR029060|interpro:IPR036279|reactome:R-CEL-5651801|dip:DIP-26974N|reactome:R-CEL-5685939 refseq:NP_491371.1|wormbase:C41D11.8|interpro:IPR018524|interpro:IPR001604(DNA/RNA non-specific endonuclease)|interpro:IPR020821|ensemblmetazoa:C41D11.8.1(transcript)|ensemblmetazoa:WBGene00000787(gene)|go:"GO:0000014"(single-stranded DNA endodeoxyribonuclease activity)|go:"GO:0000737"(DNA catabolic process, endonucleolytic)|go:"GO:0004519"(endonuclease activity)|go:"GO:0004520"(endodeoxyribonuclease activity)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0006309"(apoptotic DNA fragmentation)|go:"GO:0006401"(RNA catabolic process)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:5GKC|rcsb pdb:5GKP|rcsb pdb:3S5B|rcsb pdb:4QN0|interpro:IPR040255 - - - figure legend:Fig 2A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2011/05/20 2014/10/16 rogid:T4RC9oK5ryCPQhp7SLqwnz+dQ/w6239 rogid:/Uve+VvpV/bNMZedVIvfebHjvwA6239 intact-crc:BDB62549BA32A1F6|rigid:HG26W+FxlGbBs+g4bELUeolXdY4 false glutathione s tranferase tag:?-?|sufficient binding region:21-382 35s radiolabel:?-?|sufficient binding region:21-308 - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography)