#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q07478 uniprotkb:P33441 intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 intact:EBI-10841|ensemblfungi:YML062C|uniprotkb:D6VZB1 psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:mft1_yeast(display_long)|uniprotkb:YML062C(locus name)|uniprotkb:MFT1(gene name)|psi-mi:MFT1(display_short)|uniprotkb:Mitochondrial fusion target protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531130|imex:IM-20423-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 go:"GO:0006397"(mRNA processing)|ensemblfungi:YML062C(gene)|ensemblfungi:YML062C_mRNA(transcript)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR008501(Protein of unknown function DUF783)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|refseq:NP_013649.1|sgd:S000004527|mint:P33441|dip:DIP-4537N - crc64:AB3605A8C38A560C crc64:45A775F8C1DA3E29 figure legend:Fig. 1A, Supp. Fig. 1|comment:"Purification of Sub2 from yeast strains lacking single THO-complex components (hpr1, mft1 and thp2) causes a complete loss of interaction of the remaining subunits of the THO complex, including Tex1."|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 rogid:QFj+JFK+eAlExAo8oPxdoeJOpNY559292 intact-crc:B630089589D2E77E|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q07478 uniprotkb:P53851 intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 intact:EBI-29234|uniprotkb:D6W0U0|ensemblfungi:YNL253W psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:tex1_yeast(display_long)|uniprotkb:Trex component 1(gene name synonym)|uniprotkb:YNL253W(locus name)|uniprotkb:N0860(orf name)|uniprotkb:TEX1(gene name)|psi-mi:TEX1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531130|imex:IM-20423-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 refseq:NP_014146.1|sgd:S000005197|dip:DIP-2820N|mint:P53851|ensemblfungi:YNL253W(gene)|ensemblfungi:YNL253W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0003729"(mRNA binding)|go:"GO:0006406"(mRNA export from nucleus)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR040132|rcsb pdb:7APX|rcsb pdb:7AQO - crc64:AB3605A8C38A560C crc64:B481B305BB01A8A8 figure legend:Fig. 1A, Supp. Fig. 1|comment:"Purification of Sub2 from yeast strains lacking single THO-complex components (hpr1, mft1 and thp2) causes a complete loss of interaction of the remaining subunits of the THO complex, including Tex1."|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 rogid:2YGHinIHu32o2dahLt/l3Fr8ORs559292 intact-crc:B630089589D2E77E|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q07478 uniprotkb:O13539 intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 intact:EBI-30898|uniprotkb:D3DLB6|ensemblfungi:YHR167W psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:thp2_yeast(display_long)|uniprotkb:THP2(gene name)|psi-mi:THP2(display_short)|uniprotkb:YHR167W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531130|imex:IM-20423-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 refseq:NP_012037.1|sgd:S000001210|dip:DIP-4246N|mint:O13539|ensemblfungi:YHR167W(gene)|ensemblfungi:YHR167W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|interpro:IPR018557|rcsb pdb:7APX|rcsb pdb:7LUV - crc64:AB3605A8C38A560C crc64:16EFA6F464507C57 figure legend:Fig. 1A, Supp. Fig. 1|comment:"Purification of Sub2 from yeast strains lacking single THO-complex components (hpr1, mft1 and thp2) causes a complete loss of interaction of the remaining subunits of the THO complex, including Tex1."|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 rogid:SaTSL6jLwX1hTVCqvU8ZNR96r8U559292 intact-crc:B630089589D2E77E|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q07478 uniprotkb:P53552 intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 intact:EBI-15475|uniprotkb:D6W142|ensemblfungi:YNL139C psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:tho2_yeast(display_long)|uniprotkb:RLR1(gene name synonym)|uniprotkb:THO complex subunit RLR1(gene name synonym)|uniprotkb:LDB5(gene name synonym)|uniprotkb:THO2(gene name)|psi-mi:THO2(display_short)|uniprotkb:Low dye-binding protein 5(gene name synonym)|uniprotkb:Zinc-regulated gene 13 protein(gene name synonym)|uniprotkb:ZRG13(gene name synonym)|uniprotkb:N1209(orf name)|uniprotkb:N1835(orf name)|uniprotkb:YNL139C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531130|imex:IM-20423-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 sgd:S000005083|refseq:NP_014260.3|ensemblfungi:YNL139C(gene)|ensemblfungi:YNL139C_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0034063"(stress granule assembly)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021418|interpro:IPR021726|interpro:IPR032302|interpro:IPR040007|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|dip:DIP-6265N|mint:P53552 - crc64:AB3605A8C38A560C crc64:5F1993C3726EF298 figure legend:Fig. 1A, Supp. Fig. 1|comment:"Purification of Sub2 from yeast strains lacking single THO-complex components (hpr1, mft1 and thp2) causes a complete loss of interaction of the remaining subunits of the THO complex, including Tex1."|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 rogid:C1TncamocGADLGOOJ40Zua4UkYU559292 intact-crc:B630089589D2E77E|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q07478 uniprotkb:Q12159 intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 intact:EBI-29516|uniprotkb:D6VT14|ensemblfungi:YDR381W psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:yra1_yeast(display_long)|uniprotkb:YRA1(gene name)|psi-mi:YRA1(display_short)|uniprotkb:D9481.2(orf name)|uniprotkb:D9509.1(orf name)|uniprotkb:YDR381W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531130|imex:IM-20423-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 refseq:NP_010669.1|sgd:S000002789|dip:DIP-1791N|mint:Q12159|ensemblfungi:YDR381W(gene)|ensemblfungi:YDR381W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0003723"(RNA binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0043462"(regulation of ATP-dependent activity)|go:"GO:1902281"(negative regulation of RNA helicase activity)|go:"GO:1990119"(RNA helicase inhibitor activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034357|interpro:IPR035979|rcsb pdb:5SUP - crc64:AB3605A8C38A560C crc64:480B5B6DC0D14BE9 figure legend:Fig. 1A, Supp. Fig. 1|comment:"Purification of Sub2 from yeast strains lacking single THO-complex components (hpr1, mft1 and thp2) causes a complete loss of interaction of the remaining subunits of the THO complex, including Tex1."|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 rogid:pLiU4X4uQRi7nw6fxaSJW7Ppum4559292 intact-crc:B630089589D2E77E|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q07478 uniprotkb:P17629 intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 intact:EBI-8526|uniprotkb:Q03918|uniprotkb:D6VSC1|ensemblfungi:YDR138W psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:hpr1_yeast(display_long)|uniprotkb:HPR1(gene name)|psi-mi:HPR1(display_short)|uniprotkb:YDR138W(locus name)|uniprotkb:YD9302.14(orf name)|uniprotkb:Hyperrecombination protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531130|imex:IM-20423-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 refseq:NP_010422.1|sgd:S000002545|mint:P17629|dip:DIP-6266N|ensemblfungi:YDR138W(gene)|ensemblfungi:YDR138W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021861|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV - crc64:AB3605A8C38A560C crc64:CBD92432F099AD22 figure legend:Fig. 1A, Supp. Fig. 1|comment:"Purification of Sub2 from yeast strains lacking single THO-complex components (hpr1, mft1 and thp2) causes a complete loss of interaction of the remaining subunits of the THO complex, including Tex1."|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 rogid:7P/07YrijkKMlCOGGes6+v/eLkE559292 intact-crc:B630089589D2E77E|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q07478 uniprotkb:P53851 intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 intact:EBI-29234|uniprotkb:D6W0U0|ensemblfungi:YNL253W psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:tex1_yeast(display_long)|uniprotkb:Trex component 1(gene name synonym)|uniprotkb:YNL253W(locus name)|uniprotkb:N0860(orf name)|uniprotkb:TEX1(gene name)|psi-mi:TEX1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531141|imex:IM-20423-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 refseq:NP_014146.1|sgd:S000005197|dip:DIP-2820N|mint:P53851|ensemblfungi:YNL253W(gene)|ensemblfungi:YNL253W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0003729"(mRNA binding)|go:"GO:0006406"(mRNA export from nucleus)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR040132|rcsb pdb:7APX|rcsb pdb:7AQO - crc64:AB3605A8C38A560C crc64:B481B305BB01A8A8 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 rogid:2YGHinIHu32o2dahLt/l3Fr8ORs559292 intact-crc:E18C4E144F0DBA5E|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q07478 uniprotkb:O13539 intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 intact:EBI-30898|uniprotkb:D3DLB6|ensemblfungi:YHR167W psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:thp2_yeast(display_long)|uniprotkb:THP2(gene name)|psi-mi:THP2(display_short)|uniprotkb:YHR167W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531141|imex:IM-20423-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 refseq:NP_012037.1|sgd:S000001210|dip:DIP-4246N|mint:O13539|ensemblfungi:YHR167W(gene)|ensemblfungi:YHR167W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|interpro:IPR018557|rcsb pdb:7APX|rcsb pdb:7LUV - crc64:AB3605A8C38A560C crc64:16EFA6F464507C57 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 rogid:SaTSL6jLwX1hTVCqvU8ZNR96r8U559292 intact-crc:E18C4E144F0DBA5E|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q07478 uniprotkb:P33441 intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 intact:EBI-10841|ensemblfungi:YML062C|uniprotkb:D6VZB1 psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:mft1_yeast(display_long)|uniprotkb:YML062C(locus name)|uniprotkb:MFT1(gene name)|psi-mi:MFT1(display_short)|uniprotkb:Mitochondrial fusion target protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531141|imex:IM-20423-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 go:"GO:0006397"(mRNA processing)|ensemblfungi:YML062C(gene)|ensemblfungi:YML062C_mRNA(transcript)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR008501(Protein of unknown function DUF783)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|refseq:NP_013649.1|sgd:S000004527|mint:P33441|dip:DIP-4537N - crc64:AB3605A8C38A560C crc64:45A775F8C1DA3E29 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 rogid:QFj+JFK+eAlExAo8oPxdoeJOpNY559292 intact-crc:E18C4E144F0DBA5E|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q07478 uniprotkb:Q12159 intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 intact:EBI-29516|uniprotkb:D6VT14|ensemblfungi:YDR381W psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:yra1_yeast(display_long)|uniprotkb:YRA1(gene name)|psi-mi:YRA1(display_short)|uniprotkb:D9481.2(orf name)|uniprotkb:D9509.1(orf name)|uniprotkb:YDR381W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531141|imex:IM-20423-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 refseq:NP_010669.1|sgd:S000002789|dip:DIP-1791N|mint:Q12159|ensemblfungi:YDR381W(gene)|ensemblfungi:YDR381W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0003723"(RNA binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0043462"(regulation of ATP-dependent activity)|go:"GO:1902281"(negative regulation of RNA helicase activity)|go:"GO:1990119"(RNA helicase inhibitor activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034357|interpro:IPR035979|rcsb pdb:5SUP - crc64:AB3605A8C38A560C crc64:480B5B6DC0D14BE9 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 rogid:pLiU4X4uQRi7nw6fxaSJW7Ppum4559292 intact-crc:E18C4E144F0DBA5E|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q07478 uniprotkb:P17629 intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 intact:EBI-8526|uniprotkb:Q03918|uniprotkb:D6VSC1|ensemblfungi:YDR138W psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:hpr1_yeast(display_long)|uniprotkb:HPR1(gene name)|psi-mi:HPR1(display_short)|uniprotkb:YDR138W(locus name)|uniprotkb:YD9302.14(orf name)|uniprotkb:Hyperrecombination protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531141|imex:IM-20423-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 refseq:NP_010422.1|sgd:S000002545|mint:P17629|dip:DIP-6266N|ensemblfungi:YDR138W(gene)|ensemblfungi:YDR138W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021861|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV - crc64:AB3605A8C38A560C crc64:CBD92432F099AD22 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 rogid:7P/07YrijkKMlCOGGes6+v/eLkE559292 intact-crc:E18C4E144F0DBA5E|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q07478 uniprotkb:P53552 intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 intact:EBI-15475|uniprotkb:D6W142|ensemblfungi:YNL139C psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:tho2_yeast(display_long)|uniprotkb:RLR1(gene name synonym)|uniprotkb:THO complex subunit RLR1(gene name synonym)|uniprotkb:LDB5(gene name synonym)|uniprotkb:THO2(gene name)|psi-mi:THO2(display_short)|uniprotkb:Low dye-binding protein 5(gene name synonym)|uniprotkb:Zinc-regulated gene 13 protein(gene name synonym)|uniprotkb:ZRG13(gene name synonym)|uniprotkb:N1209(orf name)|uniprotkb:N1835(orf name)|uniprotkb:YNL139C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531141|imex:IM-20423-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 sgd:S000005083|refseq:NP_014260.3|ensemblfungi:YNL139C(gene)|ensemblfungi:YNL139C_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0034063"(stress granule assembly)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021418|interpro:IPR021726|interpro:IPR032302|interpro:IPR040007|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|dip:DIP-6265N|mint:P53552 - crc64:AB3605A8C38A560C crc64:5F1993C3726EF298 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 rogid:C1TncamocGADLGOOJ40Zua4UkYU559292 intact-crc:E18C4E144F0DBA5E|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P53552 uniprotkb:Q12159 intact:EBI-15475|uniprotkb:D6W142|ensemblfungi:YNL139C intact:EBI-29516|uniprotkb:D6VT14|ensemblfungi:YDR381W psi-mi:tho2_yeast(display_long)|uniprotkb:RLR1(gene name synonym)|uniprotkb:THO complex subunit RLR1(gene name synonym)|uniprotkb:LDB5(gene name synonym)|uniprotkb:THO2(gene name)|psi-mi:THO2(display_short)|uniprotkb:Low dye-binding protein 5(gene name synonym)|uniprotkb:Zinc-regulated gene 13 protein(gene name synonym)|uniprotkb:ZRG13(gene name synonym)|uniprotkb:N1209(orf name)|uniprotkb:N1835(orf name)|uniprotkb:YNL139C(locus name) psi-mi:yra1_yeast(display_long)|uniprotkb:YRA1(gene name)|psi-mi:YRA1(display_short)|uniprotkb:D9481.2(orf name)|uniprotkb:D9509.1(orf name)|uniprotkb:YDR381W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531152|imex:IM-20423-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000005083|refseq:NP_014260.3|ensemblfungi:YNL139C(gene)|ensemblfungi:YNL139C_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0034063"(stress granule assembly)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021418|interpro:IPR021726|interpro:IPR032302|interpro:IPR040007|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|dip:DIP-6265N|mint:P53552 refseq:NP_010669.1|sgd:S000002789|dip:DIP-1791N|mint:Q12159|ensemblfungi:YDR381W(gene)|ensemblfungi:YDR381W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0003723"(RNA binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0043462"(regulation of ATP-dependent activity)|go:"GO:1902281"(negative regulation of RNA helicase activity)|go:"GO:1990119"(RNA helicase inhibitor activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034357|interpro:IPR035979|rcsb pdb:5SUP - crc64:5F1993C3726EF298 crc64:480B5B6DC0D14BE9 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:C1TncamocGADLGOOJ40Zua4UkYU559292 rogid:pLiU4X4uQRi7nw6fxaSJW7Ppum4559292 intact-crc:3FB89D4985F4C8E5|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P53552 uniprotkb:O13539 intact:EBI-15475|uniprotkb:D6W142|ensemblfungi:YNL139C intact:EBI-30898|uniprotkb:D3DLB6|ensemblfungi:YHR167W psi-mi:tho2_yeast(display_long)|uniprotkb:RLR1(gene name synonym)|uniprotkb:THO complex subunit RLR1(gene name synonym)|uniprotkb:LDB5(gene name synonym)|uniprotkb:THO2(gene name)|psi-mi:THO2(display_short)|uniprotkb:Low dye-binding protein 5(gene name synonym)|uniprotkb:Zinc-regulated gene 13 protein(gene name synonym)|uniprotkb:ZRG13(gene name synonym)|uniprotkb:N1209(orf name)|uniprotkb:N1835(orf name)|uniprotkb:YNL139C(locus name) psi-mi:thp2_yeast(display_long)|uniprotkb:THP2(gene name)|psi-mi:THP2(display_short)|uniprotkb:YHR167W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531152|imex:IM-20423-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000005083|refseq:NP_014260.3|ensemblfungi:YNL139C(gene)|ensemblfungi:YNL139C_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0034063"(stress granule assembly)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021418|interpro:IPR021726|interpro:IPR032302|interpro:IPR040007|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|dip:DIP-6265N|mint:P53552 refseq:NP_012037.1|sgd:S000001210|dip:DIP-4246N|mint:O13539|ensemblfungi:YHR167W(gene)|ensemblfungi:YHR167W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|interpro:IPR018557|rcsb pdb:7APX|rcsb pdb:7LUV - crc64:5F1993C3726EF298 crc64:16EFA6F464507C57 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:C1TncamocGADLGOOJ40Zua4UkYU559292 rogid:SaTSL6jLwX1hTVCqvU8ZNR96r8U559292 intact-crc:3FB89D4985F4C8E5|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P53552 uniprotkb:P53851 intact:EBI-15475|uniprotkb:D6W142|ensemblfungi:YNL139C intact:EBI-29234|uniprotkb:D6W0U0|ensemblfungi:YNL253W psi-mi:tho2_yeast(display_long)|uniprotkb:RLR1(gene name synonym)|uniprotkb:THO complex subunit RLR1(gene name synonym)|uniprotkb:LDB5(gene name synonym)|uniprotkb:THO2(gene name)|psi-mi:THO2(display_short)|uniprotkb:Low dye-binding protein 5(gene name synonym)|uniprotkb:Zinc-regulated gene 13 protein(gene name synonym)|uniprotkb:ZRG13(gene name synonym)|uniprotkb:N1209(orf name)|uniprotkb:N1835(orf name)|uniprotkb:YNL139C(locus name) psi-mi:tex1_yeast(display_long)|uniprotkb:Trex component 1(gene name synonym)|uniprotkb:YNL253W(locus name)|uniprotkb:N0860(orf name)|uniprotkb:TEX1(gene name)|psi-mi:TEX1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531152|imex:IM-20423-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000005083|refseq:NP_014260.3|ensemblfungi:YNL139C(gene)|ensemblfungi:YNL139C_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0034063"(stress granule assembly)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021418|interpro:IPR021726|interpro:IPR032302|interpro:IPR040007|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|dip:DIP-6265N|mint:P53552 refseq:NP_014146.1|sgd:S000005197|dip:DIP-2820N|mint:P53851|ensemblfungi:YNL253W(gene)|ensemblfungi:YNL253W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0003729"(mRNA binding)|go:"GO:0006406"(mRNA export from nucleus)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR040132|rcsb pdb:7APX|rcsb pdb:7AQO - crc64:5F1993C3726EF298 crc64:B481B305BB01A8A8 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:C1TncamocGADLGOOJ40Zua4UkYU559292 rogid:2YGHinIHu32o2dahLt/l3Fr8ORs559292 intact-crc:3FB89D4985F4C8E5|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P53552 uniprotkb:Q07478 intact:EBI-15475|uniprotkb:D6W142|ensemblfungi:YNL139C intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 psi-mi:tho2_yeast(display_long)|uniprotkb:RLR1(gene name synonym)|uniprotkb:THO complex subunit RLR1(gene name synonym)|uniprotkb:LDB5(gene name synonym)|uniprotkb:THO2(gene name)|psi-mi:THO2(display_short)|uniprotkb:Low dye-binding protein 5(gene name synonym)|uniprotkb:Zinc-regulated gene 13 protein(gene name synonym)|uniprotkb:ZRG13(gene name synonym)|uniprotkb:N1209(orf name)|uniprotkb:N1835(orf name)|uniprotkb:YNL139C(locus name) psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531152|imex:IM-20423-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000005083|refseq:NP_014260.3|ensemblfungi:YNL139C(gene)|ensemblfungi:YNL139C_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0034063"(stress granule assembly)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021418|interpro:IPR021726|interpro:IPR032302|interpro:IPR040007|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|dip:DIP-6265N|mint:P53552 sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 - crc64:5F1993C3726EF298 crc64:AB3605A8C38A560C figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:C1TncamocGADLGOOJ40Zua4UkYU559292 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 intact-crc:3FB89D4985F4C8E5|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P53552 uniprotkb:P33441 intact:EBI-15475|uniprotkb:D6W142|ensemblfungi:YNL139C intact:EBI-10841|ensemblfungi:YML062C|uniprotkb:D6VZB1 psi-mi:tho2_yeast(display_long)|uniprotkb:RLR1(gene name synonym)|uniprotkb:THO complex subunit RLR1(gene name synonym)|uniprotkb:LDB5(gene name synonym)|uniprotkb:THO2(gene name)|psi-mi:THO2(display_short)|uniprotkb:Low dye-binding protein 5(gene name synonym)|uniprotkb:Zinc-regulated gene 13 protein(gene name synonym)|uniprotkb:ZRG13(gene name synonym)|uniprotkb:N1209(orf name)|uniprotkb:N1835(orf name)|uniprotkb:YNL139C(locus name) psi-mi:mft1_yeast(display_long)|uniprotkb:YML062C(locus name)|uniprotkb:MFT1(gene name)|psi-mi:MFT1(display_short)|uniprotkb:Mitochondrial fusion target protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531152|imex:IM-20423-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000005083|refseq:NP_014260.3|ensemblfungi:YNL139C(gene)|ensemblfungi:YNL139C_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0034063"(stress granule assembly)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021418|interpro:IPR021726|interpro:IPR032302|interpro:IPR040007|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|dip:DIP-6265N|mint:P53552 go:"GO:0006397"(mRNA processing)|ensemblfungi:YML062C(gene)|ensemblfungi:YML062C_mRNA(transcript)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR008501(Protein of unknown function DUF783)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|refseq:NP_013649.1|sgd:S000004527|mint:P33441|dip:DIP-4537N - crc64:5F1993C3726EF298 crc64:45A775F8C1DA3E29 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:C1TncamocGADLGOOJ40Zua4UkYU559292 rogid:QFj+JFK+eAlExAo8oPxdoeJOpNY559292 intact-crc:3FB89D4985F4C8E5|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P53552 uniprotkb:P17629 intact:EBI-15475|uniprotkb:D6W142|ensemblfungi:YNL139C intact:EBI-8526|uniprotkb:Q03918|uniprotkb:D6VSC1|ensemblfungi:YDR138W psi-mi:tho2_yeast(display_long)|uniprotkb:RLR1(gene name synonym)|uniprotkb:THO complex subunit RLR1(gene name synonym)|uniprotkb:LDB5(gene name synonym)|uniprotkb:THO2(gene name)|psi-mi:THO2(display_short)|uniprotkb:Low dye-binding protein 5(gene name synonym)|uniprotkb:Zinc-regulated gene 13 protein(gene name synonym)|uniprotkb:ZRG13(gene name synonym)|uniprotkb:N1209(orf name)|uniprotkb:N1835(orf name)|uniprotkb:YNL139C(locus name) psi-mi:hpr1_yeast(display_long)|uniprotkb:HPR1(gene name)|psi-mi:HPR1(display_short)|uniprotkb:YDR138W(locus name)|uniprotkb:YD9302.14(orf name)|uniprotkb:Hyperrecombination protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531152|imex:IM-20423-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000005083|refseq:NP_014260.3|ensemblfungi:YNL139C(gene)|ensemblfungi:YNL139C_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0034063"(stress granule assembly)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021418|interpro:IPR021726|interpro:IPR032302|interpro:IPR040007|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|dip:DIP-6265N|mint:P53552 refseq:NP_010422.1|sgd:S000002545|mint:P17629|dip:DIP-6266N|ensemblfungi:YDR138W(gene)|ensemblfungi:YDR138W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021861|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV - crc64:5F1993C3726EF298 crc64:CBD92432F099AD22 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:C1TncamocGADLGOOJ40Zua4UkYU559292 rogid:7P/07YrijkKMlCOGGes6+v/eLkE559292 intact-crc:3FB89D4985F4C8E5|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P17629 uniprotkb:Q12159 intact:EBI-8526|uniprotkb:Q03918|uniprotkb:D6VSC1|ensemblfungi:YDR138W intact:EBI-29516|uniprotkb:D6VT14|ensemblfungi:YDR381W psi-mi:hpr1_yeast(display_long)|uniprotkb:HPR1(gene name)|psi-mi:HPR1(display_short)|uniprotkb:YDR138W(locus name)|uniprotkb:YD9302.14(orf name)|uniprotkb:Hyperrecombination protein 1(gene name synonym) psi-mi:yra1_yeast(display_long)|uniprotkb:YRA1(gene name)|psi-mi:YRA1(display_short)|uniprotkb:D9481.2(orf name)|uniprotkb:D9509.1(orf name)|uniprotkb:YDR381W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531161|imex:IM-20423-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010422.1|sgd:S000002545|mint:P17629|dip:DIP-6266N|ensemblfungi:YDR138W(gene)|ensemblfungi:YDR138W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021861|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV refseq:NP_010669.1|sgd:S000002789|dip:DIP-1791N|mint:Q12159|ensemblfungi:YDR381W(gene)|ensemblfungi:YDR381W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0003723"(RNA binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0043462"(regulation of ATP-dependent activity)|go:"GO:1902281"(negative regulation of RNA helicase activity)|go:"GO:1990119"(RNA helicase inhibitor activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034357|interpro:IPR035979|rcsb pdb:5SUP - crc64:CBD92432F099AD22 crc64:480B5B6DC0D14BE9 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:7P/07YrijkKMlCOGGes6+v/eLkE559292 rogid:pLiU4X4uQRi7nw6fxaSJW7Ppum4559292 intact-crc:4EE8AE8A86D9360F|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P17629 uniprotkb:O13539 intact:EBI-8526|uniprotkb:Q03918|uniprotkb:D6VSC1|ensemblfungi:YDR138W intact:EBI-30898|uniprotkb:D3DLB6|ensemblfungi:YHR167W psi-mi:hpr1_yeast(display_long)|uniprotkb:HPR1(gene name)|psi-mi:HPR1(display_short)|uniprotkb:YDR138W(locus name)|uniprotkb:YD9302.14(orf name)|uniprotkb:Hyperrecombination protein 1(gene name synonym) psi-mi:thp2_yeast(display_long)|uniprotkb:THP2(gene name)|psi-mi:THP2(display_short)|uniprotkb:YHR167W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531161|imex:IM-20423-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010422.1|sgd:S000002545|mint:P17629|dip:DIP-6266N|ensemblfungi:YDR138W(gene)|ensemblfungi:YDR138W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021861|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV refseq:NP_012037.1|sgd:S000001210|dip:DIP-4246N|mint:O13539|ensemblfungi:YHR167W(gene)|ensemblfungi:YHR167W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|interpro:IPR018557|rcsb pdb:7APX|rcsb pdb:7LUV - crc64:CBD92432F099AD22 crc64:16EFA6F464507C57 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:7P/07YrijkKMlCOGGes6+v/eLkE559292 rogid:SaTSL6jLwX1hTVCqvU8ZNR96r8U559292 intact-crc:4EE8AE8A86D9360F|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P17629 uniprotkb:Q07478 intact:EBI-8526|uniprotkb:Q03918|uniprotkb:D6VSC1|ensemblfungi:YDR138W intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 psi-mi:hpr1_yeast(display_long)|uniprotkb:HPR1(gene name)|psi-mi:HPR1(display_short)|uniprotkb:YDR138W(locus name)|uniprotkb:YD9302.14(orf name)|uniprotkb:Hyperrecombination protein 1(gene name synonym) psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531161|imex:IM-20423-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010422.1|sgd:S000002545|mint:P17629|dip:DIP-6266N|ensemblfungi:YDR138W(gene)|ensemblfungi:YDR138W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021861|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 - crc64:CBD92432F099AD22 crc64:AB3605A8C38A560C figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:7P/07YrijkKMlCOGGes6+v/eLkE559292 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 intact-crc:4EE8AE8A86D9360F|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P17629 uniprotkb:P53552 intact:EBI-8526|uniprotkb:Q03918|uniprotkb:D6VSC1|ensemblfungi:YDR138W intact:EBI-15475|uniprotkb:D6W142|ensemblfungi:YNL139C psi-mi:hpr1_yeast(display_long)|uniprotkb:HPR1(gene name)|psi-mi:HPR1(display_short)|uniprotkb:YDR138W(locus name)|uniprotkb:YD9302.14(orf name)|uniprotkb:Hyperrecombination protein 1(gene name synonym) psi-mi:tho2_yeast(display_long)|uniprotkb:RLR1(gene name synonym)|uniprotkb:THO complex subunit RLR1(gene name synonym)|uniprotkb:LDB5(gene name synonym)|uniprotkb:THO2(gene name)|psi-mi:THO2(display_short)|uniprotkb:Low dye-binding protein 5(gene name synonym)|uniprotkb:Zinc-regulated gene 13 protein(gene name synonym)|uniprotkb:ZRG13(gene name synonym)|uniprotkb:N1209(orf name)|uniprotkb:N1835(orf name)|uniprotkb:YNL139C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531161|imex:IM-20423-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010422.1|sgd:S000002545|mint:P17629|dip:DIP-6266N|ensemblfungi:YDR138W(gene)|ensemblfungi:YDR138W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021861|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV sgd:S000005083|refseq:NP_014260.3|ensemblfungi:YNL139C(gene)|ensemblfungi:YNL139C_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0034063"(stress granule assembly)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021418|interpro:IPR021726|interpro:IPR032302|interpro:IPR040007|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|dip:DIP-6265N|mint:P53552 - crc64:CBD92432F099AD22 crc64:5F1993C3726EF298 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:7P/07YrijkKMlCOGGes6+v/eLkE559292 rogid:C1TncamocGADLGOOJ40Zua4UkYU559292 intact-crc:4EE8AE8A86D9360F|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P17629 uniprotkb:P53851 intact:EBI-8526|uniprotkb:Q03918|uniprotkb:D6VSC1|ensemblfungi:YDR138W intact:EBI-29234|uniprotkb:D6W0U0|ensemblfungi:YNL253W psi-mi:hpr1_yeast(display_long)|uniprotkb:HPR1(gene name)|psi-mi:HPR1(display_short)|uniprotkb:YDR138W(locus name)|uniprotkb:YD9302.14(orf name)|uniprotkb:Hyperrecombination protein 1(gene name synonym) psi-mi:tex1_yeast(display_long)|uniprotkb:Trex component 1(gene name synonym)|uniprotkb:YNL253W(locus name)|uniprotkb:N0860(orf name)|uniprotkb:TEX1(gene name)|psi-mi:TEX1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531161|imex:IM-20423-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010422.1|sgd:S000002545|mint:P17629|dip:DIP-6266N|ensemblfungi:YDR138W(gene)|ensemblfungi:YDR138W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021861|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV refseq:NP_014146.1|sgd:S000005197|dip:DIP-2820N|mint:P53851|ensemblfungi:YNL253W(gene)|ensemblfungi:YNL253W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0003729"(mRNA binding)|go:"GO:0006406"(mRNA export from nucleus)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR040132|rcsb pdb:7APX|rcsb pdb:7AQO - crc64:CBD92432F099AD22 crc64:B481B305BB01A8A8 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:7P/07YrijkKMlCOGGes6+v/eLkE559292 rogid:2YGHinIHu32o2dahLt/l3Fr8ORs559292 intact-crc:4EE8AE8A86D9360F|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P17629 uniprotkb:P33441 intact:EBI-8526|uniprotkb:Q03918|uniprotkb:D6VSC1|ensemblfungi:YDR138W intact:EBI-10841|ensemblfungi:YML062C|uniprotkb:D6VZB1 psi-mi:hpr1_yeast(display_long)|uniprotkb:HPR1(gene name)|psi-mi:HPR1(display_short)|uniprotkb:YDR138W(locus name)|uniprotkb:YD9302.14(orf name)|uniprotkb:Hyperrecombination protein 1(gene name synonym) psi-mi:mft1_yeast(display_long)|uniprotkb:YML062C(locus name)|uniprotkb:MFT1(gene name)|psi-mi:MFT1(display_short)|uniprotkb:Mitochondrial fusion target protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531161|imex:IM-20423-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010422.1|sgd:S000002545|mint:P17629|dip:DIP-6266N|ensemblfungi:YDR138W(gene)|ensemblfungi:YDR138W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021861|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV go:"GO:0006397"(mRNA processing)|ensemblfungi:YML062C(gene)|ensemblfungi:YML062C_mRNA(transcript)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR008501(Protein of unknown function DUF783)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|refseq:NP_013649.1|sgd:S000004527|mint:P33441|dip:DIP-4537N - crc64:CBD92432F099AD22 crc64:45A775F8C1DA3E29 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:7P/07YrijkKMlCOGGes6+v/eLkE559292 rogid:QFj+JFK+eAlExAo8oPxdoeJOpNY559292 intact-crc:4EE8AE8A86D9360F|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P33441 uniprotkb:P53851 intact:EBI-10841|ensemblfungi:YML062C|uniprotkb:D6VZB1 intact:EBI-29234|uniprotkb:D6W0U0|ensemblfungi:YNL253W psi-mi:mft1_yeast(display_long)|uniprotkb:YML062C(locus name)|uniprotkb:MFT1(gene name)|psi-mi:MFT1(display_short)|uniprotkb:Mitochondrial fusion target protein 1(gene name synonym) psi-mi:tex1_yeast(display_long)|uniprotkb:Trex component 1(gene name synonym)|uniprotkb:YNL253W(locus name)|uniprotkb:N0860(orf name)|uniprotkb:TEX1(gene name)|psi-mi:TEX1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531174|imex:IM-20423-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0006397"(mRNA processing)|ensemblfungi:YML062C(gene)|ensemblfungi:YML062C_mRNA(transcript)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR008501(Protein of unknown function DUF783)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|refseq:NP_013649.1|sgd:S000004527|mint:P33441|dip:DIP-4537N refseq:NP_014146.1|sgd:S000005197|dip:DIP-2820N|mint:P53851|ensemblfungi:YNL253W(gene)|ensemblfungi:YNL253W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0003729"(mRNA binding)|go:"GO:0006406"(mRNA export from nucleus)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR040132|rcsb pdb:7APX|rcsb pdb:7AQO - crc64:45A775F8C1DA3E29 crc64:B481B305BB01A8A8 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:QFj+JFK+eAlExAo8oPxdoeJOpNY559292 rogid:2YGHinIHu32o2dahLt/l3Fr8ORs559292 intact-crc:61CCFDA44B0BBAD5|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P33441 uniprotkb:P17629 intact:EBI-10841|ensemblfungi:YML062C|uniprotkb:D6VZB1 intact:EBI-8526|uniprotkb:Q03918|uniprotkb:D6VSC1|ensemblfungi:YDR138W psi-mi:mft1_yeast(display_long)|uniprotkb:YML062C(locus name)|uniprotkb:MFT1(gene name)|psi-mi:MFT1(display_short)|uniprotkb:Mitochondrial fusion target protein 1(gene name synonym) psi-mi:hpr1_yeast(display_long)|uniprotkb:HPR1(gene name)|psi-mi:HPR1(display_short)|uniprotkb:YDR138W(locus name)|uniprotkb:YD9302.14(orf name)|uniprotkb:Hyperrecombination protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531174|imex:IM-20423-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0006397"(mRNA processing)|ensemblfungi:YML062C(gene)|ensemblfungi:YML062C_mRNA(transcript)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR008501(Protein of unknown function DUF783)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|refseq:NP_013649.1|sgd:S000004527|mint:P33441|dip:DIP-4537N refseq:NP_010422.1|sgd:S000002545|mint:P17629|dip:DIP-6266N|ensemblfungi:YDR138W(gene)|ensemblfungi:YDR138W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021861|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV - crc64:45A775F8C1DA3E29 crc64:CBD92432F099AD22 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:QFj+JFK+eAlExAo8oPxdoeJOpNY559292 rogid:7P/07YrijkKMlCOGGes6+v/eLkE559292 intact-crc:61CCFDA44B0BBAD5|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P33441 uniprotkb:O13539 intact:EBI-10841|ensemblfungi:YML062C|uniprotkb:D6VZB1 intact:EBI-30898|uniprotkb:D3DLB6|ensemblfungi:YHR167W psi-mi:mft1_yeast(display_long)|uniprotkb:YML062C(locus name)|uniprotkb:MFT1(gene name)|psi-mi:MFT1(display_short)|uniprotkb:Mitochondrial fusion target protein 1(gene name synonym) psi-mi:thp2_yeast(display_long)|uniprotkb:THP2(gene name)|psi-mi:THP2(display_short)|uniprotkb:YHR167W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531174|imex:IM-20423-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0006397"(mRNA processing)|ensemblfungi:YML062C(gene)|ensemblfungi:YML062C_mRNA(transcript)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR008501(Protein of unknown function DUF783)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|refseq:NP_013649.1|sgd:S000004527|mint:P33441|dip:DIP-4537N refseq:NP_012037.1|sgd:S000001210|dip:DIP-4246N|mint:O13539|ensemblfungi:YHR167W(gene)|ensemblfungi:YHR167W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|interpro:IPR018557|rcsb pdb:7APX|rcsb pdb:7LUV - crc64:45A775F8C1DA3E29 crc64:16EFA6F464507C57 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:QFj+JFK+eAlExAo8oPxdoeJOpNY559292 rogid:SaTSL6jLwX1hTVCqvU8ZNR96r8U559292 intact-crc:61CCFDA44B0BBAD5|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P33441 uniprotkb:Q12159 intact:EBI-10841|ensemblfungi:YML062C|uniprotkb:D6VZB1 intact:EBI-29516|uniprotkb:D6VT14|ensemblfungi:YDR381W psi-mi:mft1_yeast(display_long)|uniprotkb:YML062C(locus name)|uniprotkb:MFT1(gene name)|psi-mi:MFT1(display_short)|uniprotkb:Mitochondrial fusion target protein 1(gene name synonym) psi-mi:yra1_yeast(display_long)|uniprotkb:YRA1(gene name)|psi-mi:YRA1(display_short)|uniprotkb:D9481.2(orf name)|uniprotkb:D9509.1(orf name)|uniprotkb:YDR381W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531174|imex:IM-20423-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0006397"(mRNA processing)|ensemblfungi:YML062C(gene)|ensemblfungi:YML062C_mRNA(transcript)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR008501(Protein of unknown function DUF783)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|refseq:NP_013649.1|sgd:S000004527|mint:P33441|dip:DIP-4537N refseq:NP_010669.1|sgd:S000002789|dip:DIP-1791N|mint:Q12159|ensemblfungi:YDR381W(gene)|ensemblfungi:YDR381W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0003723"(RNA binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0043462"(regulation of ATP-dependent activity)|go:"GO:1902281"(negative regulation of RNA helicase activity)|go:"GO:1990119"(RNA helicase inhibitor activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034357|interpro:IPR035979|rcsb pdb:5SUP - crc64:45A775F8C1DA3E29 crc64:480B5B6DC0D14BE9 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:QFj+JFK+eAlExAo8oPxdoeJOpNY559292 rogid:pLiU4X4uQRi7nw6fxaSJW7Ppum4559292 intact-crc:61CCFDA44B0BBAD5|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P33441 uniprotkb:Q07478 intact:EBI-10841|ensemblfungi:YML062C|uniprotkb:D6VZB1 intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 psi-mi:mft1_yeast(display_long)|uniprotkb:YML062C(locus name)|uniprotkb:MFT1(gene name)|psi-mi:MFT1(display_short)|uniprotkb:Mitochondrial fusion target protein 1(gene name synonym) psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531174|imex:IM-20423-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0006397"(mRNA processing)|ensemblfungi:YML062C(gene)|ensemblfungi:YML062C_mRNA(transcript)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR008501(Protein of unknown function DUF783)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|refseq:NP_013649.1|sgd:S000004527|mint:P33441|dip:DIP-4537N sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 - crc64:45A775F8C1DA3E29 crc64:AB3605A8C38A560C figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:QFj+JFK+eAlExAo8oPxdoeJOpNY559292 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 intact-crc:61CCFDA44B0BBAD5|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P33441 uniprotkb:P53552 intact:EBI-10841|ensemblfungi:YML062C|uniprotkb:D6VZB1 intact:EBI-15475|uniprotkb:D6W142|ensemblfungi:YNL139C psi-mi:mft1_yeast(display_long)|uniprotkb:YML062C(locus name)|uniprotkb:MFT1(gene name)|psi-mi:MFT1(display_short)|uniprotkb:Mitochondrial fusion target protein 1(gene name synonym) psi-mi:tho2_yeast(display_long)|uniprotkb:RLR1(gene name synonym)|uniprotkb:THO complex subunit RLR1(gene name synonym)|uniprotkb:LDB5(gene name synonym)|uniprotkb:THO2(gene name)|psi-mi:THO2(display_short)|uniprotkb:Low dye-binding protein 5(gene name synonym)|uniprotkb:Zinc-regulated gene 13 protein(gene name synonym)|uniprotkb:ZRG13(gene name synonym)|uniprotkb:N1209(orf name)|uniprotkb:N1835(orf name)|uniprotkb:YNL139C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531174|imex:IM-20423-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0006397"(mRNA processing)|ensemblfungi:YML062C(gene)|ensemblfungi:YML062C_mRNA(transcript)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR008501(Protein of unknown function DUF783)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|refseq:NP_013649.1|sgd:S000004527|mint:P33441|dip:DIP-4537N sgd:S000005083|refseq:NP_014260.3|ensemblfungi:YNL139C(gene)|ensemblfungi:YNL139C_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0034063"(stress granule assembly)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021418|interpro:IPR021726|interpro:IPR032302|interpro:IPR040007|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|dip:DIP-6265N|mint:P53552 - crc64:45A775F8C1DA3E29 crc64:5F1993C3726EF298 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:QFj+JFK+eAlExAo8oPxdoeJOpNY559292 rogid:C1TncamocGADLGOOJ40Zua4UkYU559292 intact-crc:61CCFDA44B0BBAD5|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O13539 uniprotkb:Q12159 intact:EBI-30898|uniprotkb:D3DLB6|ensemblfungi:YHR167W intact:EBI-29516|uniprotkb:D6VT14|ensemblfungi:YDR381W psi-mi:thp2_yeast(display_long)|uniprotkb:THP2(gene name)|psi-mi:THP2(display_short)|uniprotkb:YHR167W(locus name) psi-mi:yra1_yeast(display_long)|uniprotkb:YRA1(gene name)|psi-mi:YRA1(display_short)|uniprotkb:D9481.2(orf name)|uniprotkb:D9509.1(orf name)|uniprotkb:YDR381W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531185|imex:IM-20423-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012037.1|sgd:S000001210|dip:DIP-4246N|mint:O13539|ensemblfungi:YHR167W(gene)|ensemblfungi:YHR167W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|interpro:IPR018557|rcsb pdb:7APX|rcsb pdb:7LUV refseq:NP_010669.1|sgd:S000002789|dip:DIP-1791N|mint:Q12159|ensemblfungi:YDR381W(gene)|ensemblfungi:YDR381W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0003723"(RNA binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0043462"(regulation of ATP-dependent activity)|go:"GO:1902281"(negative regulation of RNA helicase activity)|go:"GO:1990119"(RNA helicase inhibitor activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034357|interpro:IPR035979|rcsb pdb:5SUP - crc64:16EFA6F464507C57 crc64:480B5B6DC0D14BE9 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:SaTSL6jLwX1hTVCqvU8ZNR96r8U559292 rogid:pLiU4X4uQRi7nw6fxaSJW7Ppum4559292 intact-crc:CFE91E615B946DF6|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O13539 uniprotkb:P33441 intact:EBI-30898|uniprotkb:D3DLB6|ensemblfungi:YHR167W intact:EBI-10841|ensemblfungi:YML062C|uniprotkb:D6VZB1 psi-mi:thp2_yeast(display_long)|uniprotkb:THP2(gene name)|psi-mi:THP2(display_short)|uniprotkb:YHR167W(locus name) psi-mi:mft1_yeast(display_long)|uniprotkb:YML062C(locus name)|uniprotkb:MFT1(gene name)|psi-mi:MFT1(display_short)|uniprotkb:Mitochondrial fusion target protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531185|imex:IM-20423-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012037.1|sgd:S000001210|dip:DIP-4246N|mint:O13539|ensemblfungi:YHR167W(gene)|ensemblfungi:YHR167W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|interpro:IPR018557|rcsb pdb:7APX|rcsb pdb:7LUV go:"GO:0006397"(mRNA processing)|ensemblfungi:YML062C(gene)|ensemblfungi:YML062C_mRNA(transcript)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR008501(Protein of unknown function DUF783)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|refseq:NP_013649.1|sgd:S000004527|mint:P33441|dip:DIP-4537N - crc64:16EFA6F464507C57 crc64:45A775F8C1DA3E29 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:SaTSL6jLwX1hTVCqvU8ZNR96r8U559292 rogid:QFj+JFK+eAlExAo8oPxdoeJOpNY559292 intact-crc:CFE91E615B946DF6|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O13539 uniprotkb:P53851 intact:EBI-30898|uniprotkb:D3DLB6|ensemblfungi:YHR167W intact:EBI-29234|uniprotkb:D6W0U0|ensemblfungi:YNL253W psi-mi:thp2_yeast(display_long)|uniprotkb:THP2(gene name)|psi-mi:THP2(display_short)|uniprotkb:YHR167W(locus name) psi-mi:tex1_yeast(display_long)|uniprotkb:Trex component 1(gene name synonym)|uniprotkb:YNL253W(locus name)|uniprotkb:N0860(orf name)|uniprotkb:TEX1(gene name)|psi-mi:TEX1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531185|imex:IM-20423-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012037.1|sgd:S000001210|dip:DIP-4246N|mint:O13539|ensemblfungi:YHR167W(gene)|ensemblfungi:YHR167W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|interpro:IPR018557|rcsb pdb:7APX|rcsb pdb:7LUV refseq:NP_014146.1|sgd:S000005197|dip:DIP-2820N|mint:P53851|ensemblfungi:YNL253W(gene)|ensemblfungi:YNL253W_mRNA(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0003729"(mRNA binding)|go:"GO:0006406"(mRNA export from nucleus)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|interpro:IPR040132|rcsb pdb:7APX|rcsb pdb:7AQO - crc64:16EFA6F464507C57 crc64:B481B305BB01A8A8 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:SaTSL6jLwX1hTVCqvU8ZNR96r8U559292 rogid:2YGHinIHu32o2dahLt/l3Fr8ORs559292 intact-crc:CFE91E615B946DF6|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O13539 uniprotkb:P53552 intact:EBI-30898|uniprotkb:D3DLB6|ensemblfungi:YHR167W intact:EBI-15475|uniprotkb:D6W142|ensemblfungi:YNL139C psi-mi:thp2_yeast(display_long)|uniprotkb:THP2(gene name)|psi-mi:THP2(display_short)|uniprotkb:YHR167W(locus name) psi-mi:tho2_yeast(display_long)|uniprotkb:RLR1(gene name synonym)|uniprotkb:THO complex subunit RLR1(gene name synonym)|uniprotkb:LDB5(gene name synonym)|uniprotkb:THO2(gene name)|psi-mi:THO2(display_short)|uniprotkb:Low dye-binding protein 5(gene name synonym)|uniprotkb:Zinc-regulated gene 13 protein(gene name synonym)|uniprotkb:ZRG13(gene name synonym)|uniprotkb:N1209(orf name)|uniprotkb:N1835(orf name)|uniprotkb:YNL139C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531185|imex:IM-20423-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012037.1|sgd:S000001210|dip:DIP-4246N|mint:O13539|ensemblfungi:YHR167W(gene)|ensemblfungi:YHR167W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|interpro:IPR018557|rcsb pdb:7APX|rcsb pdb:7LUV sgd:S000005083|refseq:NP_014260.3|ensemblfungi:YNL139C(gene)|ensemblfungi:YNL139C_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0034063"(stress granule assembly)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021418|interpro:IPR021726|interpro:IPR032302|interpro:IPR040007|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|dip:DIP-6265N|mint:P53552 - crc64:16EFA6F464507C57 crc64:5F1993C3726EF298 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:SaTSL6jLwX1hTVCqvU8ZNR96r8U559292 rogid:C1TncamocGADLGOOJ40Zua4UkYU559292 intact-crc:CFE91E615B946DF6|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O13539 uniprotkb:P17629 intact:EBI-30898|uniprotkb:D3DLB6|ensemblfungi:YHR167W intact:EBI-8526|uniprotkb:Q03918|uniprotkb:D6VSC1|ensemblfungi:YDR138W psi-mi:thp2_yeast(display_long)|uniprotkb:THP2(gene name)|psi-mi:THP2(display_short)|uniprotkb:YHR167W(locus name) psi-mi:hpr1_yeast(display_long)|uniprotkb:HPR1(gene name)|psi-mi:HPR1(display_short)|uniprotkb:YDR138W(locus name)|uniprotkb:YD9302.14(orf name)|uniprotkb:Hyperrecombination protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531185|imex:IM-20423-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012037.1|sgd:S000001210|dip:DIP-4246N|mint:O13539|ensemblfungi:YHR167W(gene)|ensemblfungi:YHR167W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|interpro:IPR018557|rcsb pdb:7APX|rcsb pdb:7LUV refseq:NP_010422.1|sgd:S000002545|mint:P17629|dip:DIP-6266N|ensemblfungi:YDR138W(gene)|ensemblfungi:YDR138W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|interpro:IPR021861|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV - crc64:16EFA6F464507C57 crc64:CBD92432F099AD22 figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:SaTSL6jLwX1hTVCqvU8ZNR96r8U559292 rogid:7P/07YrijkKMlCOGGes6+v/eLkE559292 intact-crc:CFE91E615B946DF6|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O13539 uniprotkb:Q07478 intact:EBI-30898|uniprotkb:D3DLB6|ensemblfungi:YHR167W intact:EBI-18500|ensemblfungi:YDL084W|uniprotkb:D6VRR5 psi-mi:thp2_yeast(display_long)|uniprotkb:THP2(gene name)|psi-mi:THP2(display_short)|uniprotkb:YHR167W(locus name) psi-mi:sub2_yeast(display_long)|uniprotkb:SUB2(gene name)|psi-mi:SUB2(display_short)|uniprotkb:Suppressor of BRR1 protein 2(gene name synonym)|uniprotkb:YDL084W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531185|imex:IM-20423-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012037.1|sgd:S000001210|dip:DIP-4246N|mint:O13539|ensemblfungi:YHR167W(gene)|ensemblfungi:YHR167W_mRNA(transcript)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0000446"(nucleoplasmic THO complex)|go:"GO:0000723"(telomere maintenance)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0006310"(DNA recombination)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0034063"(stress granule assembly)|interpro:IPR018557|rcsb pdb:7APX|rcsb pdb:7LUV sgd:S000002242|refseq:NP_010199.1|ensemblfungi:YDL084W(gene)|rcsb pdb:5SUP|rcsb pdb:5SUQ|rcsb pdb:7APX|rcsb pdb:7AQO|rcsb pdb:7LUV|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006283"(transcription-coupled nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0031124"(mRNA 3'-end processing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|ensemblfungi:YDL084W_mRNA(transcript)|dip:DIP-5343N|mint:Q07478 - crc64:16EFA6F464507C57 crc64:AB3605A8C38A560C figure legend:Fig. 1A|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2010/01/15 2014/10/16 rogid:SaTSL6jLwX1hTVCqvU8ZNR96r8U559292 rogid:jIWYSXKwdexLISR24GhAf0aZvuU559292 intact-crc:CFE91E615B946DF6|rigid:NKD4VycUQryerr1SO4CFn7jUJJI false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q13838 uniprotkb:Q8NI27 intact:EBI-348622|uniprotkb:B0S8C0|uniprotkb:Q5STB8|uniprotkb:O43496|uniprotkb:Q0EFA1|uniprotkb:Q2L6F9|uniprotkb:Q53GL9|uniprotkb:Q5RJ64|uniprotkb:Q5RJ66|uniprotkb:Q5ST94|uniprotkb:Q5STB4|uniprotkb:Q5STB5|uniprotkb:Q5STB7|uniprotkb:Q5STU4|uniprotkb:Q5STU5|uniprotkb:Q5STU6|uniprotkb:Q5STU8|uniprotkb:Q71V76|ensembl:ENSP00000373000|ensembl:ENSP00000379475|ensembl:ENSP00000383151|ensembl:ENSP00000383152|ensembl:ENSP00000387994|ensembl:ENSP00000388880|ensembl:ENSP00000390999|ensembl:ENSP00000391463|ensembl:ENSP00000393712|ensembl:ENSP00000394160|ensembl:ENSP00000398775|ensembl:ENSP00000399030|ensembl:ENSP00000400326|ensembl:ENSP00000404695|ensembl:ENSP00000405560|ensembl:ENSP00000407419|ensembl:ENSP00000411136|ensembl:ENSP00000411853|ensembl:ENSP00000416269 intact:EBI-1755078|intact:EBI-2802903|uniprotkb:A6NM50|uniprotkb:Q9H8I6|uniprotkb:Q5JZ12|uniprotkb:Q6IN92|ensembl:ENSP00000245838|ensembl:ENSP00000347959 psi-mi:dx39b_human(display_long)|uniprotkb:UAP56(gene name synonym)|uniprotkb:DDX39B(gene name)|psi-mi:DDX39B(display_short)|uniprotkb:DEAD box protein UAP56(gene name synonym)|uniprotkb:56 kDa U2AF65-associated protein(gene name synonym)|uniprotkb:ATP-dependent RNA helicase p47(gene name synonym)|uniprotkb:HLA-B-associated transcript 1 protein(gene name synonym)|uniprotkb:BAT1(gene name synonym) psi-mi:thoc2_human(display_long)|uniprotkb:hTREX120(gene name synonym)|uniprotkb:THOC2(gene name)|psi-mi:THOC2(display_short)|uniprotkb:CXorf3(gene name synonym) psi-mi:"MI:0096"(pull down) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531206|imex:IM-20423-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004631.1|refseq:NP_542165.1|ensembl:ENSG00000198563(gene)|ensembl:ENSG00000215425(gene)|ensembl:ENSG00000225073(gene)|ensembl:ENSG00000225859(gene)|ensembl:ENSG00000229496(gene)|ensembl:ENSG00000230624(gene)|ensembl:ENSG00000235439(gene)|ensembl:ENST00000383508(transcript)|ensembl:ENST00000396172(transcript)|ensembl:ENST00000400295(transcript)|ensembl:ENST00000400296(transcript)|ensembl:ENST00000412106(transcript)|ensembl:ENST00000412330(transcript)|ensembl:ENST00000413678(transcript)|ensembl:ENST00000414440(transcript)|ensembl:ENST00000415689(transcript)|ensembl:ENST00000416863(transcript)|ensembl:ENST00000430784(transcript)|ensembl:ENST00000431360(transcript)|ensembl:ENST00000441425(transcript)|ensembl:ENST00000445218(transcript)|ensembl:ENST00000448296(transcript)|ensembl:ENST00000453138(transcript)|ensembl:ENST00000456476(transcript)|ensembl:ENST00000456666(transcript)|ensembl:ENST00000458640(transcript)|go:"GO:0000245"(spliceosomal complex assembly)|go:"GO:0000346"(transcription export complex)|go:"GO:0001889"(liver development)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005737"(cytoplasm)|go:"GO:0006405"(RNA export from nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0008380"(RNA splicing)|go:"GO:0010501"(RNA secondary structure unwinding)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0030621"(U4 snRNA binding)|go:"GO:0032786"(positive regulation of DNA-templated transcription, elongation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043008"(ATP-dependent protein binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0046784"(viral mRNA export from host cell nucleus)|go:"GO:0061051"(positive regulation of cell growth involved in cardiac muscle cell development)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1904707"(positive regulation of vascular associated smooth muscle cell proliferation)|go:"GO:2000002"(negative regulation of DNA damage checkpoint)|go:"GO:2000573"(positive regulation of DNA biosynthetic process)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|mint:Q13838|rcsb pdb:1T5I|rcsb pdb:1T6N|rcsb pdb:1XTI|rcsb pdb:1XTJ|rcsb pdb:1XTK|rcsb pdb:7APK|reactome:R-HSA-159236|reactome:R-HSA-72187|reactome:R-HSA-73856|reactome:R-HSA-9013418 refseq:NP_001075019.1|ensembl:ENSG00000125676(gene)|ensembl:ENST00000245838(transcript)|ensembl:ENST00000355725(transcript)|go:"GO:0000346"(transcription export complex)|go:"GO:0000347"(THO complex)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006397"(mRNA processing)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0008380"(RNA splicing)|go:"GO:0010977"(negative regulation of neuron projection development)|go:"GO:0016607"(nuclear speck)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0046784"(viral mRNA export from host cell nucleus)|go:"GO:0048666"(neuron development)|go:"GO:0048699"(generation of neurons)|interpro:IPR021418|interpro:IPR021726|interpro:IPR032302|interpro:IPR040007|mint:Q8NI27|rcsb pdb:7APK|reactome:R-HSA-159236|reactome:R-HSA-72187|reactome:R-HSA-73856 go:"GO:0005634"(nucleus) - - figure legend:Fig. 1D, 1E|comment:The interaction is not abolished by RNase treatment.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2010/01/15 2014/10/16 rogid:Cl/rf1oq31fZbLHC2foUXu9MBOE9606 rogid:GJCI/aEu/upu9s/gMVJvt56PXP89606 intact-crc:5FE5A46976251F06|rigid:nxsyZQSuYExuet/t80/bO1b99GA false glutathione s tranferase tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q13838 uniprotkb:Q96FV9 intact:EBI-348622|uniprotkb:B0S8C0|uniprotkb:Q5STB8|uniprotkb:O43496|uniprotkb:Q0EFA1|uniprotkb:Q2L6F9|uniprotkb:Q53GL9|uniprotkb:Q5RJ64|uniprotkb:Q5RJ66|uniprotkb:Q5ST94|uniprotkb:Q5STB4|uniprotkb:Q5STB5|uniprotkb:Q5STB7|uniprotkb:Q5STU4|uniprotkb:Q5STU5|uniprotkb:Q5STU6|uniprotkb:Q5STU8|uniprotkb:Q71V76|ensembl:ENSP00000373000|ensembl:ENSP00000379475|ensembl:ENSP00000383151|ensembl:ENSP00000383152|ensembl:ENSP00000387994|ensembl:ENSP00000388880|ensembl:ENSP00000390999|ensembl:ENSP00000391463|ensembl:ENSP00000393712|ensembl:ENSP00000394160|ensembl:ENSP00000398775|ensembl:ENSP00000399030|ensembl:ENSP00000400326|ensembl:ENSP00000404695|ensembl:ENSP00000405560|ensembl:ENSP00000407419|ensembl:ENSP00000411136|ensembl:ENSP00000411853|ensembl:ENSP00000416269 intact:EBI-1765605|uniprotkb:Q15219|uniprotkb:B2RBP6|uniprotkb:Q64I72|uniprotkb:Q64I73|intact:EBI-28984554|ensembl:ENSP00000261600 psi-mi:dx39b_human(display_long)|uniprotkb:UAP56(gene name synonym)|uniprotkb:DDX39B(gene name)|psi-mi:DDX39B(display_short)|uniprotkb:DEAD box protein UAP56(gene name synonym)|uniprotkb:56 kDa U2AF65-associated protein(gene name synonym)|uniprotkb:ATP-dependent RNA helicase p47(gene name synonym)|uniprotkb:HLA-B-associated transcript 1 protein(gene name synonym)|uniprotkb:BAT1(gene name synonym) psi-mi:thoc1_human(display_long)|uniprotkb:hTREX84(gene name synonym)|uniprotkb:THOC1(gene name)|psi-mi:THOC1(display_short)|uniprotkb:HPR1(gene name synonym)|uniprotkb:Nuclear matrix protein p84(gene name synonym) psi-mi:"MI:0096"(pull down) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531206|imex:IM-20423-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004631.1|refseq:NP_542165.1|ensembl:ENSG00000198563(gene)|ensembl:ENSG00000215425(gene)|ensembl:ENSG00000225073(gene)|ensembl:ENSG00000225859(gene)|ensembl:ENSG00000229496(gene)|ensembl:ENSG00000230624(gene)|ensembl:ENSG00000235439(gene)|ensembl:ENST00000383508(transcript)|ensembl:ENST00000396172(transcript)|ensembl:ENST00000400295(transcript)|ensembl:ENST00000400296(transcript)|ensembl:ENST00000412106(transcript)|ensembl:ENST00000412330(transcript)|ensembl:ENST00000413678(transcript)|ensembl:ENST00000414440(transcript)|ensembl:ENST00000415689(transcript)|ensembl:ENST00000416863(transcript)|ensembl:ENST00000430784(transcript)|ensembl:ENST00000431360(transcript)|ensembl:ENST00000441425(transcript)|ensembl:ENST00000445218(transcript)|ensembl:ENST00000448296(transcript)|ensembl:ENST00000453138(transcript)|ensembl:ENST00000456476(transcript)|ensembl:ENST00000456666(transcript)|ensembl:ENST00000458640(transcript)|go:"GO:0000245"(spliceosomal complex assembly)|go:"GO:0000346"(transcription export complex)|go:"GO:0001889"(liver development)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005737"(cytoplasm)|go:"GO:0006405"(RNA export from nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0008380"(RNA splicing)|go:"GO:0010501"(RNA secondary structure unwinding)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0030621"(U4 snRNA binding)|go:"GO:0032786"(positive regulation of DNA-templated transcription, elongation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043008"(ATP-dependent protein binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0046784"(viral mRNA export from host cell nucleus)|go:"GO:0061051"(positive regulation of cell growth involved in cardiac muscle cell development)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1904707"(positive regulation of vascular associated smooth muscle cell proliferation)|go:"GO:2000002"(negative regulation of DNA damage checkpoint)|go:"GO:2000573"(positive regulation of DNA biosynthetic process)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|mint:Q13838|rcsb pdb:1T5I|rcsb pdb:1T6N|rcsb pdb:1XTI|rcsb pdb:1XTJ|rcsb pdb:1XTK|rcsb pdb:7APK|reactome:R-HSA-159236|reactome:R-HSA-72187|reactome:R-HSA-73856|reactome:R-HSA-9013418 refseq:NP_005122.2|ensembl:ENSP00000261600|ensembl:ENSG00000079134(gene)|ensembl:ENST00000261600(transcript)|go:"GO:0000018"(regulation of DNA recombination)|go:"GO:0000346"(transcription export complex)|go:"GO:0000347"(THO complex)|go:"GO:0000445"(THO complex part of transcription export complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006396"(RNA processing)|go:"GO:0006397"(mRNA processing)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0006915"(apoptotic process)|go:"GO:0007165"(signal transduction)|go:"GO:0008380"(RNA splicing)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0031297"(replication fork processing)|go:"GO:0032784"(regulation of DNA-templated transcription, elongation)|go:"GO:0032786"(positive regulation of DNA-templated transcription, elongation)|go:"GO:0046784"(viral mRNA export from host cell nucleus)|go:"GO:0048297"(negative regulation of isotype switching to IgA isotypes)|go:"GO:2000002"(negative regulation of DNA damage checkpoint)|interpro:IPR000488(Death)|interpro:IPR011029(DEATH-like)|interpro:IPR021861|mint:Q96FV9|rcsb pdb:1WXP|rcsb pdb:7APK|reactome:R-HSA-159236|reactome:R-HSA-72187|reactome:R-HSA-73856 go:"GO:0005634"(nucleus) - - figure legend:Fig. 1D, 1E|comment:The interaction is not abolished by RNase treatment.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2010/01/15 2014/10/16 rogid:Cl/rf1oq31fZbLHC2foUXu9MBOE9606 rogid:D+lk5iFzcmd1bQRa2cx/nUyq4sI9606 intact-crc:5FE5A46976251F06|rigid:nxsyZQSuYExuet/t80/bO1b99GA false glutathione s tranferase tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q13838 uniprotkb:Q86V81 intact:EBI-348622|uniprotkb:B0S8C0|uniprotkb:Q5STB8|uniprotkb:O43496|uniprotkb:Q0EFA1|uniprotkb:Q2L6F9|uniprotkb:Q53GL9|uniprotkb:Q5RJ64|uniprotkb:Q5RJ66|uniprotkb:Q5ST94|uniprotkb:Q5STB4|uniprotkb:Q5STB5|uniprotkb:Q5STB7|uniprotkb:Q5STU4|uniprotkb:Q5STU5|uniprotkb:Q5STU6|uniprotkb:Q5STU8|uniprotkb:Q71V76|ensembl:ENSP00000373000|ensembl:ENSP00000379475|ensembl:ENSP00000383151|ensembl:ENSP00000383152|ensembl:ENSP00000387994|ensembl:ENSP00000388880|ensembl:ENSP00000390999|ensembl:ENSP00000391463|ensembl:ENSP00000393712|ensembl:ENSP00000394160|ensembl:ENSP00000398775|ensembl:ENSP00000399030|ensembl:ENSP00000400326|ensembl:ENSP00000404695|ensembl:ENSP00000405560|ensembl:ENSP00000407419|ensembl:ENSP00000411136|ensembl:ENSP00000411853|ensembl:ENSP00000416269 intact:EBI-347640|uniprotkb:O43672 psi-mi:dx39b_human(display_long)|uniprotkb:UAP56(gene name synonym)|uniprotkb:DDX39B(gene name)|psi-mi:DDX39B(display_short)|uniprotkb:DEAD box protein UAP56(gene name synonym)|uniprotkb:56 kDa U2AF65-associated protein(gene name synonym)|uniprotkb:ATP-dependent RNA helicase p47(gene name synonym)|uniprotkb:HLA-B-associated transcript 1 protein(gene name synonym)|uniprotkb:BAT1(gene name synonym) psi-mi:thoc4_human(display_long)|uniprotkb:ALYREF(gene name)|psi-mi:ALYREF(display_short)|uniprotkb:ALY(gene name synonym)|uniprotkb:Ally of AML-1 and LEF-1(gene name synonym)|uniprotkb:Aly/REF export factor(gene name synonym)|uniprotkb:BEF(gene name synonym)|uniprotkb:THOC4(gene name synonym)|uniprotkb:Transcriptional coactivator Aly/REF(gene name synonym)|uniprotkb:bZIP-enhancing factor BEF(gene name synonym) psi-mi:"MI:0096"(pull down) Strasser et al. (2002) pubmed:11979277|imex:IM-20423 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2531206|imex:IM-20423-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004631.1|refseq:NP_542165.1|ensembl:ENSG00000198563(gene)|ensembl:ENSG00000215425(gene)|ensembl:ENSG00000225073(gene)|ensembl:ENSG00000225859(gene)|ensembl:ENSG00000229496(gene)|ensembl:ENSG00000230624(gene)|ensembl:ENSG00000235439(gene)|ensembl:ENST00000383508(transcript)|ensembl:ENST00000396172(transcript)|ensembl:ENST00000400295(transcript)|ensembl:ENST00000400296(transcript)|ensembl:ENST00000412106(transcript)|ensembl:ENST00000412330(transcript)|ensembl:ENST00000413678(transcript)|ensembl:ENST00000414440(transcript)|ensembl:ENST00000415689(transcript)|ensembl:ENST00000416863(transcript)|ensembl:ENST00000430784(transcript)|ensembl:ENST00000431360(transcript)|ensembl:ENST00000441425(transcript)|ensembl:ENST00000445218(transcript)|ensembl:ENST00000448296(transcript)|ensembl:ENST00000453138(transcript)|ensembl:ENST00000456476(transcript)|ensembl:ENST00000456666(transcript)|ensembl:ENST00000458640(transcript)|go:"GO:0000245"(spliceosomal complex assembly)|go:"GO:0000346"(transcription export complex)|go:"GO:0001889"(liver development)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005737"(cytoplasm)|go:"GO:0006405"(RNA export from nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0008380"(RNA splicing)|go:"GO:0010501"(RNA secondary structure unwinding)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0030621"(U4 snRNA binding)|go:"GO:0032786"(positive regulation of DNA-templated transcription, elongation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043008"(ATP-dependent protein binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0046784"(viral mRNA export from host cell nucleus)|go:"GO:0061051"(positive regulation of cell growth involved in cardiac muscle cell development)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1904707"(positive regulation of vascular associated smooth muscle cell proliferation)|go:"GO:2000002"(negative regulation of DNA damage checkpoint)|go:"GO:2000573"(positive regulation of DNA biosynthetic process)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|mint:Q13838|rcsb pdb:1T5I|rcsb pdb:1T6N|rcsb pdb:1XTI|rcsb pdb:1XTJ|rcsb pdb:1XTK|rcsb pdb:7APK|reactome:R-HSA-159236|reactome:R-HSA-72187|reactome:R-HSA-73856|reactome:R-HSA-9013418 refseq:NP_005773.3|mint:Q86V81|dip:DIP-32711N|go:"GO:0000018"(regulation of DNA recombination)|go:"GO:0000346"(transcription export complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0001649"(osteoblast differentiation)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006405"(RNA export from nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016020"(membrane)|go:"GO:0016607"(nuclear speck)|go:"GO:0031297"(replication fork processing)|go:"GO:0032786"(positive regulation of DNA-templated transcription, elongation)|go:"GO:0046784"(viral mRNA export from host cell nucleus)|go:"GO:0062153"(C5-methylcytidine-containing RNA binding)|go:"GO:0070062"(extracellular exosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|rcsb pdb:3ULH|reactome:R-HSA-159227|reactome:R-HSA-159230|reactome:R-HSA-159231|reactome:R-HSA-159236|reactome:R-HSA-72163|reactome:R-HSA-72187|reactome:R-HSA-73856|interpro:IPR025715 go:"GO:0005634"(nucleus) - - figure legend:Fig. 1D, 1E|comment:The interaction is not abolished by RNase treatment.|dataset:Apoptosis - Interactions involving proteins with a function related to apoptosis|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2010/01/15 2014/10/16 rogid:Cl/rf1oq31fZbLHC2foUXu9MBOE9606 rogid:beNqQmz9NZk8EdpXoQs0lIxOvTk9606 intact-crc:5FE5A46976251F06|rigid:nxsyZQSuYExuet/t80/bO1b99GA false glutathione s tranferase tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry)