#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P32776 uniprotkb:P06839 intact:EBI-19146|uniprotkb:E9P948|uniprotkb:D6VSU0|ensemblfungi:YDR311W intact:EBI-14762|ensemblfungi:YER171W|uniprotkb:D3DM79 psi-mi:tfb1_yeast(display_long)|uniprotkb:TFB1(gene name)|psi-mi:TFB1(display_short)|uniprotkb:RNA polymerase II transcription factor B p73 subunit(gene name synonym)|uniprotkb:RNA polymerase II transcription factor B 73 kDa subunit(gene name synonym)|uniprotkb:RNA polymerase II transcription factor B subunit 1(gene name synonym)|uniprotkb:D9740.3(orf name)|uniprotkb:YDR311W(locus name) psi-mi:rad3_yeast(display_long)|uniprotkb:RAD3(gene name)|psi-mi:RAD3(display_short)|uniprotkb:REM1(gene name synonym)|uniprotkb:DNA repair helicase RAD3(gene name synonym)|uniprotkb:RNA polymerase II transcription factor B subunit RAD3(gene name synonym)|uniprotkb:YER171W(locus name) psi-mi:"MI:0096"(pull down) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410659|imex:IM-20338-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002719|ensemblfungi:YDR311W(gene)|ensemblfungi:YDR311W_mRNA(transcript)|go:"GO:0000112"(nucleotide-excision repair factor 3 complex)|go:"GO:0000439"(transcription factor TFIIH core complex)|go:"GO:0005634"(nucleus)|go:"GO:0005675"(transcription factor TFIIH holo complex)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0010314"(phosphatidylinositol-5-phosphate binding)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0070816"(phosphorylation of RNA polymerase II C-terminal domain)|interpro:IPR005607(BSD)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013876(TFIIH p62 subunit, N-terminal)|interpro:IPR027079|interpro:IPR035925|rcsb pdb:1Y5O|rcsb pdb:2GS0|rcsb pdb:2K2U|rcsb pdb:2L2I|rcsb pdb:2LOX|rcsb pdb:2M14|rcsb pdb:2MKR|rcsb pdb:2N0Y|rcsb pdb:2N23|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5URN|rcsb pdb:6GYM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-5696395|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-72086|reactome:R-SCE-73772|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|refseq:NP_010597.3|dip:DIP-1702N|mint:P32776 sgd:S000000973|ensemblfungi:YER171W(gene)|refseq:NP_011098.3|ensemblfungi:YER171W_mRNA(transcript)|go:"GO:0000112"(nucleotide-excision repair factor 3 complex)|go:"GO:0000439"(transcription factor TFIIH core complex)|go:"GO:0000717"(nucleotide-excision repair, DNA duplex unwinding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005675"(transcription factor TFIIH holo complex)|go:"GO:0005829"(cytosol)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0009411"(response to UV)|go:"GO:0010525"(regulation of transposition, RNA-mediated)|go:"GO:0033683"(nucleotide-excision repair, DNA incision)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045951"(positive regulation of mitotic recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|go:"GO:0070816"(phosphorylation of RNA polymerase II C-terminal domain)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001945(Xeroderma pigmentosum group D protein)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR006554(Helicase-like, DEXD box c2 type)|interpro:IPR006555(Helicase, ATP-dependent, c2 type)|interpro:IPR010614(DEAD2)|interpro:IPR010643(Protein of unknown function DUF1227)|interpro:IPR013020("DNA helicase (DNA repair), Rad3 type")|interpro:IPR014013(Helicase, superfamily 1 and 2, ATP-binding, DinG/Rad3-type)|interpro:IPR027417|interpro:IPR042493|rcsb pdb:5FMF|rcsb pdb:5OQJ|rcsb pdb:5OQM|go:"GO:0000019"(regulation of mitotic recombination)|rcsb pdb:5SVA|rcsb pdb:6GYM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|reactome:R-SCE-113418|reactome:R-SCE-5696395|rcsb pdb:7O75|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-72086|reactome:R-SCE-73772|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|dip:DIP-2425N|mint:P06839 - crc64:DAE369FE90A224F8 crc64:978BCA01751949B4 figure legend:Fig. 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/08/14 2014/10/16 rogid:se+ssALbdhXBSmWq07fKDAaxEHk559292 rogid:LNq4nTBI7aG+e2N6xMcc9OgQMUo559292 intact-crc:B609B58F96ED9EAD|rigid:wEioW6Szk9Hq3meQSijOKZ98vG8 false his tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P32776 uniprotkb:Q00578 intact:EBI-19146|uniprotkb:E9P948|uniprotkb:D6VSU0|ensemblfungi:YDR311W intact:EBI-14683|uniprotkb:D6VVE4|ensemblfungi:YIL143C psi-mi:tfb1_yeast(display_long)|uniprotkb:TFB1(gene name)|psi-mi:TFB1(display_short)|uniprotkb:RNA polymerase II transcription factor B p73 subunit(gene name synonym)|uniprotkb:RNA polymerase II transcription factor B 73 kDa subunit(gene name synonym)|uniprotkb:RNA polymerase II transcription factor B subunit 1(gene name synonym)|uniprotkb:D9740.3(orf name)|uniprotkb:YDR311W(locus name) psi-mi:rad25_yeast(display_long)|uniprotkb:YIL143C(locus name)|uniprotkb:SSL2(gene name)|psi-mi:SSL2(display_short)|uniprotkb:RAD25(gene name synonym)|uniprotkb:UVS112(gene name synonym)|uniprotkb:LOM3(gene name synonym)|uniprotkb:Suppressor of stem-loop mutation 2(gene name synonym)|uniprotkb:DNA repair helicase RAD25(gene name synonym)|uniprotkb:RNA polymerase II transcription factor B subunit SSL2(gene name synonym) psi-mi:"MI:0096"(pull down) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410659|imex:IM-20338-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002719|ensemblfungi:YDR311W(gene)|ensemblfungi:YDR311W_mRNA(transcript)|go:"GO:0000112"(nucleotide-excision repair factor 3 complex)|go:"GO:0000439"(transcription factor TFIIH core complex)|go:"GO:0005634"(nucleus)|go:"GO:0005675"(transcription factor TFIIH holo complex)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0010314"(phosphatidylinositol-5-phosphate binding)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0070816"(phosphorylation of RNA polymerase II C-terminal domain)|interpro:IPR005607(BSD)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013876(TFIIH p62 subunit, N-terminal)|interpro:IPR027079|interpro:IPR035925|rcsb pdb:1Y5O|rcsb pdb:2GS0|rcsb pdb:2K2U|rcsb pdb:2L2I|rcsb pdb:2LOX|rcsb pdb:2M14|rcsb pdb:2MKR|rcsb pdb:2N0Y|rcsb pdb:2N23|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5URN|rcsb pdb:6GYM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-5696395|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-72086|reactome:R-SCE-73772|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|refseq:NP_010597.3|dip:DIP-1702N|mint:P32776 refseq:NP_012123.1|sgd:S000001405|ensemblfungi:YIL143C(gene)|ensemblfungi:YIL143C_mRNA(transcript)|go:"GO:0000019"(regulation of mitotic recombination)|go:"GO:0000112"(nucleotide-excision repair factor 3 complex)|go:"GO:0000439"(transcription factor TFIIH core complex)|go:"GO:0001111"(promoter clearance from RNA polymerase II promoter)|go:"GO:0001113"(transcription open complex formation at RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005675"(transcription factor TFIIH holo complex)|go:"GO:0005829"(cytosol)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006367"(transcription initiation from RNA polymerase II promoter)|go:"GO:0010525"(regulation of transposition, RNA-mediated)|go:"GO:0015616"(DNA translocase activity)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0032508"(DNA duplex unwinding)|go:"GO:0033683"(nucleotide-excision repair, DNA incision)|go:"GO:0043138"(3'-5' DNA helicase activity)|go:"GO:0070816"(phosphorylation of RNA polymerase II C-terminal domain)|go:"GO:0097550"(transcription preinitiation complex)|go:"GO:0005634"(nucleus)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001161("Xeroderma pigmentosum group B protein (XP-B)")|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR006935(Restriction endonuclease, type I, R subunit/Type III, Res subunit)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR032438|interpro:IPR032830|rcsb pdb:5FMF|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5SVA|rcsb pdb:6GYM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-5696395|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-72086|reactome:R-SCE-73772|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|dip:DIP-731N|mint:Q00578 - crc64:DAE369FE90A224F8 crc64:FA4013E8156FE1C5 figure legend:Fig. 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/08/14 2014/10/16 rogid:se+ssALbdhXBSmWq07fKDAaxEHk559292 rogid:YtV99gfzqhICf6nFYLAhh3Kg0C0559292 intact-crc:B609B58F96ED9EAD|rigid:wEioW6Szk9Hq3meQSijOKZ98vG8 false his tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P32776 uniprotkb:Q04673 intact:EBI-19146|uniprotkb:E9P948|uniprotkb:D6VSU0|ensemblfungi:YDR311W intact:EBI-18198|uniprotkb:E9P8Y6|uniprotkb:D6VY07|ensemblfungi:YLR005W psi-mi:tfb1_yeast(display_long)|uniprotkb:TFB1(gene name)|psi-mi:TFB1(display_short)|uniprotkb:RNA polymerase II transcription factor B p73 subunit(gene name synonym)|uniprotkb:RNA polymerase II transcription factor B 73 kDa subunit(gene name synonym)|uniprotkb:RNA polymerase II transcription factor B subunit 1(gene name synonym)|uniprotkb:D9740.3(orf name)|uniprotkb:YDR311W(locus name) psi-mi:ssl1_yeast(display_long)|uniprotkb:SSL1(gene name)|psi-mi:SSL1(display_short)|uniprotkb:RNA polymerase II transcription factor B subunit SSL1(gene name synonym)|uniprotkb:Suppressor of stem-loop protein 1(gene name synonym)|uniprotkb:YLR005W(locus name) psi-mi:"MI:0096"(pull down) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410659|imex:IM-20338-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002719|ensemblfungi:YDR311W(gene)|ensemblfungi:YDR311W_mRNA(transcript)|go:"GO:0000112"(nucleotide-excision repair factor 3 complex)|go:"GO:0000439"(transcription factor TFIIH core complex)|go:"GO:0005634"(nucleus)|go:"GO:0005675"(transcription factor TFIIH holo complex)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0010314"(phosphatidylinositol-5-phosphate binding)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0070816"(phosphorylation of RNA polymerase II C-terminal domain)|interpro:IPR005607(BSD)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013876(TFIIH p62 subunit, N-terminal)|interpro:IPR027079|interpro:IPR035925|rcsb pdb:1Y5O|rcsb pdb:2GS0|rcsb pdb:2K2U|rcsb pdb:2L2I|rcsb pdb:2LOX|rcsb pdb:2M14|rcsb pdb:2MKR|rcsb pdb:2N0Y|rcsb pdb:2N23|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5URN|rcsb pdb:6GYM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-5696395|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-72086|reactome:R-SCE-73772|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|refseq:NP_010597.3|dip:DIP-1702N|mint:P32776 refseq:NP_013105.1|sgd:S000003995|ensemblfungi:YLR005W(gene)|ensemblfungi:YLR005W_mRNA(transcript)|go:"GO:0000112"(nucleotide-excision repair factor 3 complex)|go:"GO:0000439"(transcription factor TFIIH core complex)|go:"GO:0005675"(transcription factor TFIIH holo complex)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070816"(phosphorylation of RNA polymerase II C-terminal domain)|interpro:IPR002035(von Willebrand factor, type A)|interpro:IPR004595(TFIIH C1-like, C-terminal)|interpro:IPR012170(TFIIH basal transcription factor complex, subunit SSL1)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036465|rcsb pdb:4WFQ|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:6GYM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-5696395|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-72086|reactome:R-SCE-73772|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|interpro:IPR007198(Ssl1-like)|dip:DIP-2435N|mint:Q04673 - crc64:DAE369FE90A224F8 crc64:57ADCB630B790B4F figure legend:Fig. 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/08/14 2014/10/16 rogid:se+ssALbdhXBSmWq07fKDAaxEHk559292 rogid:NHwOfK411BNm3qDMqpfaQ7rbmRc559292 intact-crc:B609B58F96ED9EAD|rigid:wEioW6Szk9Hq3meQSijOKZ98vG8 false his tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P06839 uniprotkb:Q04673 intact:EBI-14762|ensemblfungi:YER171W|uniprotkb:D3DM79 intact:EBI-18198|uniprotkb:E9P8Y6|uniprotkb:D6VY07|ensemblfungi:YLR005W psi-mi:rad3_yeast(display_long)|uniprotkb:RAD3(gene name)|psi-mi:RAD3(display_short)|uniprotkb:REM1(gene name synonym)|uniprotkb:DNA repair helicase RAD3(gene name synonym)|uniprotkb:RNA polymerase II transcription factor B subunit RAD3(gene name synonym)|uniprotkb:YER171W(locus name) psi-mi:ssl1_yeast(display_long)|uniprotkb:SSL1(gene name)|psi-mi:SSL1(display_short)|uniprotkb:RNA polymerase II transcription factor B subunit SSL1(gene name synonym)|uniprotkb:Suppressor of stem-loop protein 1(gene name synonym)|uniprotkb:YLR005W(locus name) psi-mi:"MI:0071"(molecular sieving) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410674|imex:IM-20338-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000000973|ensemblfungi:YER171W(gene)|refseq:NP_011098.3|ensemblfungi:YER171W_mRNA(transcript)|go:"GO:0000112"(nucleotide-excision repair factor 3 complex)|go:"GO:0000439"(transcription factor TFIIH core complex)|go:"GO:0000717"(nucleotide-excision repair, DNA duplex unwinding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005675"(transcription factor TFIIH holo complex)|go:"GO:0005829"(cytosol)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0009411"(response to UV)|go:"GO:0010525"(regulation of transposition, RNA-mediated)|go:"GO:0033683"(nucleotide-excision repair, DNA incision)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045951"(positive regulation of mitotic recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|go:"GO:0070816"(phosphorylation of RNA polymerase II C-terminal domain)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001945(Xeroderma pigmentosum group D protein)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR006554(Helicase-like, DEXD box c2 type)|interpro:IPR006555(Helicase, ATP-dependent, c2 type)|interpro:IPR010614(DEAD2)|interpro:IPR010643(Protein of unknown function DUF1227)|interpro:IPR013020("DNA helicase (DNA repair), Rad3 type")|interpro:IPR014013(Helicase, superfamily 1 and 2, ATP-binding, DinG/Rad3-type)|interpro:IPR027417|interpro:IPR042493|rcsb pdb:5FMF|rcsb pdb:5OQJ|rcsb pdb:5OQM|go:"GO:0000019"(regulation of mitotic recombination)|rcsb pdb:5SVA|rcsb pdb:6GYM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|reactome:R-SCE-113418|reactome:R-SCE-5696395|rcsb pdb:7O75|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-72086|reactome:R-SCE-73772|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|dip:DIP-2425N|mint:P06839 refseq:NP_013105.1|sgd:S000003995|ensemblfungi:YLR005W(gene)|ensemblfungi:YLR005W_mRNA(transcript)|go:"GO:0000112"(nucleotide-excision repair factor 3 complex)|go:"GO:0000439"(transcription factor TFIIH core complex)|go:"GO:0005675"(transcription factor TFIIH holo complex)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070816"(phosphorylation of RNA polymerase II C-terminal domain)|interpro:IPR002035(von Willebrand factor, type A)|interpro:IPR004595(TFIIH C1-like, C-terminal)|interpro:IPR012170(TFIIH basal transcription factor complex, subunit SSL1)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036465|rcsb pdb:4WFQ|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:6GYM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-5696395|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-72086|reactome:R-SCE-73772|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|interpro:IPR007198(Ssl1-like)|dip:DIP-2435N|mint:Q04673 - crc64:978BCA01751949B4 crc64:57ADCB630B790B4F figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/08/14 2014/10/16 rogid:LNq4nTBI7aG+e2N6xMcc9OgQMUo559292 rogid:NHwOfK411BNm3qDMqpfaQ7rbmRc559292 intact-crc:A1CF6EAAF11CF731|rigid:VFZ7V4GYHRUf8QlRVvvHP4q5kXo false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P06839 uniprotkb:P32776 intact:EBI-14762|ensemblfungi:YER171W|uniprotkb:D3DM79 intact:EBI-19146|uniprotkb:E9P948|uniprotkb:D6VSU0|ensemblfungi:YDR311W psi-mi:rad3_yeast(display_long)|uniprotkb:RAD3(gene name)|psi-mi:RAD3(display_short)|uniprotkb:REM1(gene name synonym)|uniprotkb:DNA repair helicase RAD3(gene name synonym)|uniprotkb:RNA polymerase II transcription factor B subunit RAD3(gene name synonym)|uniprotkb:YER171W(locus name) psi-mi:tfb1_yeast(display_long)|uniprotkb:TFB1(gene name)|psi-mi:TFB1(display_short)|uniprotkb:RNA polymerase II transcription factor B p73 subunit(gene name synonym)|uniprotkb:RNA polymerase II transcription factor B 73 kDa subunit(gene name synonym)|uniprotkb:RNA polymerase II transcription factor B subunit 1(gene name synonym)|uniprotkb:D9740.3(orf name)|uniprotkb:YDR311W(locus name) psi-mi:"MI:0071"(molecular sieving) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410674|imex:IM-20338-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000000973|ensemblfungi:YER171W(gene)|refseq:NP_011098.3|ensemblfungi:YER171W_mRNA(transcript)|go:"GO:0000112"(nucleotide-excision repair factor 3 complex)|go:"GO:0000439"(transcription factor TFIIH core complex)|go:"GO:0000717"(nucleotide-excision repair, DNA duplex unwinding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005675"(transcription factor TFIIH holo complex)|go:"GO:0005829"(cytosol)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0009411"(response to UV)|go:"GO:0010525"(regulation of transposition, RNA-mediated)|go:"GO:0033683"(nucleotide-excision repair, DNA incision)|go:"GO:0043139"(5'-3' DNA helicase activity)|go:"GO:0045951"(positive regulation of mitotic recombination)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|go:"GO:0070816"(phosphorylation of RNA polymerase II C-terminal domain)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001945(Xeroderma pigmentosum group D protein)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR006554(Helicase-like, DEXD box c2 type)|interpro:IPR006555(Helicase, ATP-dependent, c2 type)|interpro:IPR010614(DEAD2)|interpro:IPR010643(Protein of unknown function DUF1227)|interpro:IPR013020("DNA helicase (DNA repair), Rad3 type")|interpro:IPR014013(Helicase, superfamily 1 and 2, ATP-binding, DinG/Rad3-type)|interpro:IPR027417|interpro:IPR042493|rcsb pdb:5FMF|rcsb pdb:5OQJ|rcsb pdb:5OQM|go:"GO:0000019"(regulation of mitotic recombination)|rcsb pdb:5SVA|rcsb pdb:6GYM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|reactome:R-SCE-113418|reactome:R-SCE-5696395|rcsb pdb:7O75|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-72086|reactome:R-SCE-73772|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|dip:DIP-2425N|mint:P06839 sgd:S000002719|ensemblfungi:YDR311W(gene)|ensemblfungi:YDR311W_mRNA(transcript)|go:"GO:0000112"(nucleotide-excision repair factor 3 complex)|go:"GO:0000439"(transcription factor TFIIH core complex)|go:"GO:0005634"(nucleus)|go:"GO:0005675"(transcription factor TFIIH holo complex)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0010314"(phosphatidylinositol-5-phosphate binding)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0070816"(phosphorylation of RNA polymerase II C-terminal domain)|interpro:IPR005607(BSD)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013876(TFIIH p62 subunit, N-terminal)|interpro:IPR027079|interpro:IPR035925|rcsb pdb:1Y5O|rcsb pdb:2GS0|rcsb pdb:2K2U|rcsb pdb:2L2I|rcsb pdb:2LOX|rcsb pdb:2M14|rcsb pdb:2MKR|rcsb pdb:2N0Y|rcsb pdb:2N23|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5URN|rcsb pdb:6GYM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O4K|rcsb pdb:7O4L|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-113418|reactome:R-SCE-5696395|reactome:R-SCE-674695|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-6796648|reactome:R-SCE-72086|reactome:R-SCE-73772|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-75955|reactome:R-SCE-76042|reactome:R-SCE-77075|refseq:NP_010597.3|dip:DIP-1702N|mint:P32776 - crc64:978BCA01751949B4 crc64:DAE369FE90A224F8 figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/08/14 2014/10/16 rogid:LNq4nTBI7aG+e2N6xMcc9OgQMUo559292 rogid:se+ssALbdhXBSmWq07fKDAaxEHk559292 intact-crc:A1CF6EAAF11CF731|rigid:VFZ7V4GYHRUf8QlRVvvHP4q5kXo false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P06838 uniprotkb:P28519 intact:EBI-14637|uniprotkb:D6W0J0|ensemblfungi:YML095C intact:EBI-14641|uniprotkb:D6W026|ensemblfungi:YMR201C psi-mi:rad10_yeast(display_long)|uniprotkb:YML095C(locus name)|uniprotkb:RAD10(gene name)|psi-mi:RAD10(display_short) psi-mi:rad14_yeast(display_long)|uniprotkb:YM8325.02C(orf name)|uniprotkb:YMR201C(locus name)|uniprotkb:RAD14(gene name)|psi-mi:RAD14(display_short) psi-mi:"MI:0071"(molecular sieving) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410680|imex:IM-20338-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013614.1|sgd:S000004560|ensemblfungi:YML095C(gene)|ensemblfungi:YML095C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:0070522"(ERCC4-ERCC1 complex)|go:"GO:0070914"(UV-damage excision repair)|interpro:IPR004579(DNA repair protein rad10)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|go:"GO:0000735"(removal of nonhomologous ends)|dip:DIP-1545N|mint:P06838 refseq:NP_013928.1|sgd:S000004814|reactome:R-SCE-6782135|ensemblfungi:YMR201C(gene)|ensemblfungi:YMR201C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000715"(nucleotide-excision repair, DNA damage recognition)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006284"(base-excision repair)|go:"GO:0008270"(zinc ion binding)|go:"GO:0033683"(nucleotide-excision repair, DNA incision)|go:"GO:0070914"(UV-damage excision repair)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR000465(XPA)|interpro:IPR009061(Putative DNA binding)|interpro:IPR022652|interpro:IPR022656|interpro:IPR022658|interpro:IPR037129|rcsb pdb:5A39|rcsb pdb:5A3D|rcsb pdb:5G32|rcsb pdb:5G33|rcsb pdb:5G34|rcsb pdb:5G35|rcsb pdb:5LCL|rcsb pdb:5LCM|reactome:R-SCE-5696395|reactome:R-SCE-6781823|dip:DIP-1896N|mint:P28519 - crc64:26891AD9CA1E3E2B crc64:A90FA9CAA6F3EA52 figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/08/14 2014/10/16 rogid:HuIiO90qNTbc/EU4wnsunA1WoMI559292 rogid:Sl/UtzvA/TKpvV7NnH/6XSXdvuE559292 intact-crc:56B50FD92BDAD64E|rigid:yNbV0mTHzlaiWmMU5mG38zt4ZdQ false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P06838 uniprotkb:P06777 intact:EBI-14637|uniprotkb:D6W0J0|ensemblfungi:YML095C intact:EBI-14752|uniprotkb:D6W3Z0|ensemblfungi:YPL022W psi-mi:rad10_yeast(display_long)|uniprotkb:YML095C(locus name)|uniprotkb:RAD10(gene name)|psi-mi:RAD10(display_short) psi-mi:rad1_yeast(display_long)|uniprotkb:YPL022W(locus name)|uniprotkb:RAD1(gene name)|psi-mi:RAD1(display_short) psi-mi:"MI:0071"(molecular sieving) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410680|imex:IM-20338-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013614.1|sgd:S000004560|ensemblfungi:YML095C(gene)|ensemblfungi:YML095C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:0070522"(ERCC4-ERCC1 complex)|go:"GO:0070914"(UV-damage excision repair)|interpro:IPR004579(DNA repair protein rad10)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|go:"GO:0000735"(removal of nonhomologous ends)|dip:DIP-1545N|mint:P06838 refseq:NP_015303.1|sgd:S000005943|ensemblfungi:YPL022W(gene)|ensemblfungi:YPL022W_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000712"(resolution of meiotic recombination intermediates)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000735"(removal of nonhomologous ends)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR006166(DNA repair nuclease, XPF-type/Helicase)|interpro:IPR006167(DNA repair protein)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|reactome:R-SCE-6782135|go:"GO:0004520"(endodeoxyribonuclease activity)|dip:DIP-2424N|mint:P06777 - crc64:26891AD9CA1E3E2B crc64:06FDA601F3F59B10 figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/08/14 2014/10/16 rogid:HuIiO90qNTbc/EU4wnsunA1WoMI559292 rogid:7L6RpWb8IxXAlO/CW7G1svlR+Og559292 intact-crc:56B50FD92BDAD64E|rigid:yNbV0mTHzlaiWmMU5mG38zt4ZdQ false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P06777 uniprotkb:P06838 intact:EBI-14752|uniprotkb:D6W3Z0|ensemblfungi:YPL022W intact:EBI-14637|uniprotkb:D6W0J0|ensemblfungi:YML095C psi-mi:rad1_yeast(display_long)|uniprotkb:YPL022W(locus name)|uniprotkb:RAD1(gene name)|psi-mi:RAD1(display_short) psi-mi:rad10_yeast(display_long)|uniprotkb:YML095C(locus name)|uniprotkb:RAD10(gene name)|psi-mi:RAD10(display_short) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410692|imex:IM-20338-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015303.1|sgd:S000005943|ensemblfungi:YPL022W(gene)|ensemblfungi:YPL022W_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000712"(resolution of meiotic recombination intermediates)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000735"(removal of nonhomologous ends)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR006166(DNA repair nuclease, XPF-type/Helicase)|interpro:IPR006167(DNA repair protein)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|reactome:R-SCE-6782135|go:"GO:0004520"(endodeoxyribonuclease activity)|dip:DIP-2424N|mint:P06777 refseq:NP_013614.1|sgd:S000004560|ensemblfungi:YML095C(gene)|ensemblfungi:YML095C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:0070522"(ERCC4-ERCC1 complex)|go:"GO:0070914"(UV-damage excision repair)|interpro:IPR004579(DNA repair protein rad10)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|go:"GO:0000735"(removal of nonhomologous ends)|dip:DIP-1545N|mint:P06838 - crc64:06FDA601F3F59B10 crc64:26891AD9CA1E3E2B figure legend:Fig. 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/08/14 2014/10/16 rogid:7L6RpWb8IxXAlO/CW7G1svlR+Og559292 rogid:HuIiO90qNTbc/EU4wnsunA1WoMI559292 intact-crc:D1B5CD65E28FC6B4|rigid:yNbV0mTHzlaiWmMU5mG38zt4ZdQ false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P06777 uniprotkb:P28519 intact:EBI-14752|uniprotkb:D6W3Z0|ensemblfungi:YPL022W intact:EBI-14641|uniprotkb:D6W026|ensemblfungi:YMR201C psi-mi:rad1_yeast(display_long)|uniprotkb:YPL022W(locus name)|uniprotkb:RAD1(gene name)|psi-mi:RAD1(display_short) psi-mi:rad14_yeast(display_long)|uniprotkb:YM8325.02C(orf name)|uniprotkb:YMR201C(locus name)|uniprotkb:RAD14(gene name)|psi-mi:RAD14(display_short) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410692|imex:IM-20338-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015303.1|sgd:S000005943|ensemblfungi:YPL022W(gene)|ensemblfungi:YPL022W_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000712"(resolution of meiotic recombination intermediates)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000735"(removal of nonhomologous ends)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR006166(DNA repair nuclease, XPF-type/Helicase)|interpro:IPR006167(DNA repair protein)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|reactome:R-SCE-6782135|go:"GO:0004520"(endodeoxyribonuclease activity)|dip:DIP-2424N|mint:P06777 refseq:NP_013928.1|sgd:S000004814|reactome:R-SCE-6782135|ensemblfungi:YMR201C(gene)|ensemblfungi:YMR201C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000715"(nucleotide-excision repair, DNA damage recognition)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006284"(base-excision repair)|go:"GO:0008270"(zinc ion binding)|go:"GO:0033683"(nucleotide-excision repair, DNA incision)|go:"GO:0070914"(UV-damage excision repair)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR000465(XPA)|interpro:IPR009061(Putative DNA binding)|interpro:IPR022652|interpro:IPR022656|interpro:IPR022658|interpro:IPR037129|rcsb pdb:5A39|rcsb pdb:5A3D|rcsb pdb:5G32|rcsb pdb:5G33|rcsb pdb:5G34|rcsb pdb:5G35|rcsb pdb:5LCL|rcsb pdb:5LCM|reactome:R-SCE-5696395|reactome:R-SCE-6781823|dip:DIP-1896N|mint:P28519 - crc64:06FDA601F3F59B10 crc64:A90FA9CAA6F3EA52 figure legend:Fig. 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/08/14 2014/10/16 rogid:7L6RpWb8IxXAlO/CW7G1svlR+Og559292 rogid:Sl/UtzvA/TKpvV7NnH/6XSXdvuE559292 intact-crc:D1B5CD65E28FC6B4|rigid:yNbV0mTHzlaiWmMU5mG38zt4ZdQ false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P06838 uniprotkb:P28519 intact:EBI-14637|uniprotkb:D6W0J0|ensemblfungi:YML095C intact:EBI-14641|uniprotkb:D6W026|ensemblfungi:YMR201C psi-mi:rad10_yeast(display_long)|uniprotkb:YML095C(locus name)|uniprotkb:RAD10(gene name)|psi-mi:RAD10(display_short) psi-mi:rad14_yeast(display_long)|uniprotkb:YM8325.02C(orf name)|uniprotkb:YMR201C(locus name)|uniprotkb:RAD14(gene name)|psi-mi:RAD14(display_short) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410698|imex:IM-20338-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013614.1|sgd:S000004560|ensemblfungi:YML095C(gene)|ensemblfungi:YML095C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:0070522"(ERCC4-ERCC1 complex)|go:"GO:0070914"(UV-damage excision repair)|interpro:IPR004579(DNA repair protein rad10)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|go:"GO:0000735"(removal of nonhomologous ends)|dip:DIP-1545N|mint:P06838 refseq:NP_013928.1|sgd:S000004814|reactome:R-SCE-6782135|ensemblfungi:YMR201C(gene)|ensemblfungi:YMR201C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000715"(nucleotide-excision repair, DNA damage recognition)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006284"(base-excision repair)|go:"GO:0008270"(zinc ion binding)|go:"GO:0033683"(nucleotide-excision repair, DNA incision)|go:"GO:0070914"(UV-damage excision repair)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR000465(XPA)|interpro:IPR009061(Putative DNA binding)|interpro:IPR022652|interpro:IPR022656|interpro:IPR022658|interpro:IPR037129|rcsb pdb:5A39|rcsb pdb:5A3D|rcsb pdb:5G32|rcsb pdb:5G33|rcsb pdb:5G34|rcsb pdb:5G35|rcsb pdb:5LCL|rcsb pdb:5LCM|reactome:R-SCE-5696395|reactome:R-SCE-6781823|dip:DIP-1896N|mint:P28519 - crc64:26891AD9CA1E3E2B crc64:A90FA9CAA6F3EA52 figure legend:Fig. 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/08/14 2014/10/16 rogid:HuIiO90qNTbc/EU4wnsunA1WoMI559292 rogid:Sl/UtzvA/TKpvV7NnH/6XSXdvuE559292 intact-crc:2CB0B2B016932A45|rigid:yNbV0mTHzlaiWmMU5mG38zt4ZdQ false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P06838 uniprotkb:P06777 intact:EBI-14637|uniprotkb:D6W0J0|ensemblfungi:YML095C intact:EBI-14752|uniprotkb:D6W3Z0|ensemblfungi:YPL022W psi-mi:rad10_yeast(display_long)|uniprotkb:YML095C(locus name)|uniprotkb:RAD10(gene name)|psi-mi:RAD10(display_short) psi-mi:rad1_yeast(display_long)|uniprotkb:YPL022W(locus name)|uniprotkb:RAD1(gene name)|psi-mi:RAD1(display_short) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410698|imex:IM-20338-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013614.1|sgd:S000004560|ensemblfungi:YML095C(gene)|ensemblfungi:YML095C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:0070522"(ERCC4-ERCC1 complex)|go:"GO:0070914"(UV-damage excision repair)|interpro:IPR004579(DNA repair protein rad10)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|go:"GO:0000735"(removal of nonhomologous ends)|dip:DIP-1545N|mint:P06838 refseq:NP_015303.1|sgd:S000005943|ensemblfungi:YPL022W(gene)|ensemblfungi:YPL022W_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000712"(resolution of meiotic recombination intermediates)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000735"(removal of nonhomologous ends)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR006166(DNA repair nuclease, XPF-type/Helicase)|interpro:IPR006167(DNA repair protein)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|reactome:R-SCE-6782135|go:"GO:0004520"(endodeoxyribonuclease activity)|dip:DIP-2424N|mint:P06777 - crc64:26891AD9CA1E3E2B crc64:06FDA601F3F59B10 figure legend:Fig. 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/08/14 2014/10/16 rogid:HuIiO90qNTbc/EU4wnsunA1WoMI559292 rogid:7L6RpWb8IxXAlO/CW7G1svlR+Og559292 intact-crc:2CB0B2B016932A45|rigid:yNbV0mTHzlaiWmMU5mG38zt4ZdQ false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P28519 uniprotkb:P06777 intact:EBI-14641|uniprotkb:D6W026|ensemblfungi:YMR201C intact:EBI-14752|uniprotkb:D6W3Z0|ensemblfungi:YPL022W psi-mi:rad14_yeast(display_long)|uniprotkb:YM8325.02C(orf name)|uniprotkb:YMR201C(locus name)|uniprotkb:RAD14(gene name)|psi-mi:RAD14(display_short) psi-mi:rad1_yeast(display_long)|uniprotkb:YPL022W(locus name)|uniprotkb:RAD1(gene name)|psi-mi:RAD1(display_short) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410704|imex:IM-20338-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013928.1|sgd:S000004814|reactome:R-SCE-6782135|ensemblfungi:YMR201C(gene)|ensemblfungi:YMR201C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000715"(nucleotide-excision repair, DNA damage recognition)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006284"(base-excision repair)|go:"GO:0008270"(zinc ion binding)|go:"GO:0033683"(nucleotide-excision repair, DNA incision)|go:"GO:0070914"(UV-damage excision repair)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR000465(XPA)|interpro:IPR009061(Putative DNA binding)|interpro:IPR022652|interpro:IPR022656|interpro:IPR022658|interpro:IPR037129|rcsb pdb:5A39|rcsb pdb:5A3D|rcsb pdb:5G32|rcsb pdb:5G33|rcsb pdb:5G34|rcsb pdb:5G35|rcsb pdb:5LCL|rcsb pdb:5LCM|reactome:R-SCE-5696395|reactome:R-SCE-6781823|dip:DIP-1896N|mint:P28519 refseq:NP_015303.1|sgd:S000005943|ensemblfungi:YPL022W(gene)|ensemblfungi:YPL022W_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000712"(resolution of meiotic recombination intermediates)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000735"(removal of nonhomologous ends)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR006166(DNA repair nuclease, XPF-type/Helicase)|interpro:IPR006167(DNA repair protein)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|reactome:R-SCE-6782135|go:"GO:0004520"(endodeoxyribonuclease activity)|dip:DIP-2424N|mint:P06777 - crc64:A90FA9CAA6F3EA52 crc64:06FDA601F3F59B10 figure legend:Fig. 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/08/14 2014/10/16 rogid:Sl/UtzvA/TKpvV7NnH/6XSXdvuE559292 rogid:7L6RpWb8IxXAlO/CW7G1svlR+Og559292 intact-crc:18A33066109DEDDB|rigid:yNbV0mTHzlaiWmMU5mG38zt4ZdQ false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P28519 uniprotkb:P06838 intact:EBI-14641|uniprotkb:D6W026|ensemblfungi:YMR201C intact:EBI-14637|uniprotkb:D6W0J0|ensemblfungi:YML095C psi-mi:rad14_yeast(display_long)|uniprotkb:YM8325.02C(orf name)|uniprotkb:YMR201C(locus name)|uniprotkb:RAD14(gene name)|psi-mi:RAD14(display_short) psi-mi:rad10_yeast(display_long)|uniprotkb:YML095C(locus name)|uniprotkb:RAD10(gene name)|psi-mi:RAD10(display_short) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410704|imex:IM-20338-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013928.1|sgd:S000004814|reactome:R-SCE-6782135|ensemblfungi:YMR201C(gene)|ensemblfungi:YMR201C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000715"(nucleotide-excision repair, DNA damage recognition)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006284"(base-excision repair)|go:"GO:0008270"(zinc ion binding)|go:"GO:0033683"(nucleotide-excision repair, DNA incision)|go:"GO:0070914"(UV-damage excision repair)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR000465(XPA)|interpro:IPR009061(Putative DNA binding)|interpro:IPR022652|interpro:IPR022656|interpro:IPR022658|interpro:IPR037129|rcsb pdb:5A39|rcsb pdb:5A3D|rcsb pdb:5G32|rcsb pdb:5G33|rcsb pdb:5G34|rcsb pdb:5G35|rcsb pdb:5LCL|rcsb pdb:5LCM|reactome:R-SCE-5696395|reactome:R-SCE-6781823|dip:DIP-1896N|mint:P28519 refseq:NP_013614.1|sgd:S000004560|ensemblfungi:YML095C(gene)|ensemblfungi:YML095C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:0070522"(ERCC4-ERCC1 complex)|go:"GO:0070914"(UV-damage excision repair)|interpro:IPR004579(DNA repair protein rad10)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|go:"GO:0000735"(removal of nonhomologous ends)|dip:DIP-1545N|mint:P06838 - crc64:A90FA9CAA6F3EA52 crc64:26891AD9CA1E3E2B figure legend:Fig. 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/08/14 2014/10/16 rogid:Sl/UtzvA/TKpvV7NnH/6XSXdvuE559292 rogid:HuIiO90qNTbc/EU4wnsunA1WoMI559292 intact-crc:18A33066109DEDDB|rigid:yNbV0mTHzlaiWmMU5mG38zt4ZdQ false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P06777 uniprotkb:P28519 intact:EBI-14752|uniprotkb:D6W3Z0|ensemblfungi:YPL022W intact:EBI-14641|uniprotkb:D6W026|ensemblfungi:YMR201C psi-mi:rad1_yeast(display_long)|uniprotkb:YPL022W(locus name)|uniprotkb:RAD1(gene name)|psi-mi:RAD1(display_short) psi-mi:rad14_yeast(display_long)|uniprotkb:YM8325.02C(orf name)|uniprotkb:YMR201C(locus name)|uniprotkb:RAD14(gene name)|psi-mi:RAD14(display_short) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410716|imex:IM-20338-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015303.1|sgd:S000005943|ensemblfungi:YPL022W(gene)|ensemblfungi:YPL022W_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000712"(resolution of meiotic recombination intermediates)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000735"(removal of nonhomologous ends)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR006166(DNA repair nuclease, XPF-type/Helicase)|interpro:IPR006167(DNA repair protein)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|reactome:R-SCE-6782135|go:"GO:0004520"(endodeoxyribonuclease activity)|dip:DIP-2424N|mint:P06777 refseq:NP_013928.1|sgd:S000004814|reactome:R-SCE-6782135|ensemblfungi:YMR201C(gene)|ensemblfungi:YMR201C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000715"(nucleotide-excision repair, DNA damage recognition)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006284"(base-excision repair)|go:"GO:0008270"(zinc ion binding)|go:"GO:0033683"(nucleotide-excision repair, DNA incision)|go:"GO:0070914"(UV-damage excision repair)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR000465(XPA)|interpro:IPR009061(Putative DNA binding)|interpro:IPR022652|interpro:IPR022656|interpro:IPR022658|interpro:IPR037129|rcsb pdb:5A39|rcsb pdb:5A3D|rcsb pdb:5G32|rcsb pdb:5G33|rcsb pdb:5G34|rcsb pdb:5G35|rcsb pdb:5LCL|rcsb pdb:5LCM|reactome:R-SCE-5696395|reactome:R-SCE-6781823|dip:DIP-1896N|mint:P28519 - crc64:06FDA601F3F59B10 crc64:A90FA9CAA6F3EA52 figure legend:Fig. 5|comment:Levels of RAD14 coprecipitated with RAD1 increases when RAD10 is present, suggesting that a Rad1-Rad10 complex recruits Rad14.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2009/08/14 2014/10/16 rogid:7L6RpWb8IxXAlO/CW7G1svlR+Og559292 rogid:Sl/UtzvA/TKpvV7NnH/6XSXdvuE559292 intact-crc:84B2005EA707D9B9|rigid:m/tzJImcA9IQFSQdQvSPrafhaGg false - 35s radiolabel:?-? - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) uniprotkb:P06838 uniprotkb:P28519 intact:EBI-14637|uniprotkb:D6W0J0|ensemblfungi:YML095C intact:EBI-14641|uniprotkb:D6W026|ensemblfungi:YMR201C psi-mi:rad10_yeast(display_long)|uniprotkb:YML095C(locus name)|uniprotkb:RAD10(gene name)|psi-mi:RAD10(display_short) psi-mi:rad14_yeast(display_long)|uniprotkb:YM8325.02C(orf name)|uniprotkb:YMR201C(locus name)|uniprotkb:RAD14(gene name)|psi-mi:RAD14(display_short) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410723|imex:IM-20338-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013614.1|sgd:S000004560|ensemblfungi:YML095C(gene)|ensemblfungi:YML095C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:0070522"(ERCC4-ERCC1 complex)|go:"GO:0070914"(UV-damage excision repair)|interpro:IPR004579(DNA repair protein rad10)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|go:"GO:0000735"(removal of nonhomologous ends)|dip:DIP-1545N|mint:P06838 refseq:NP_013928.1|sgd:S000004814|reactome:R-SCE-6782135|ensemblfungi:YMR201C(gene)|ensemblfungi:YMR201C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000715"(nucleotide-excision repair, DNA damage recognition)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006284"(base-excision repair)|go:"GO:0008270"(zinc ion binding)|go:"GO:0033683"(nucleotide-excision repair, DNA incision)|go:"GO:0070914"(UV-damage excision repair)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR000465(XPA)|interpro:IPR009061(Putative DNA binding)|interpro:IPR022652|interpro:IPR022656|interpro:IPR022658|interpro:IPR037129|rcsb pdb:5A39|rcsb pdb:5A3D|rcsb pdb:5G32|rcsb pdb:5G33|rcsb pdb:5G34|rcsb pdb:5G35|rcsb pdb:5LCL|rcsb pdb:5LCM|reactome:R-SCE-5696395|reactome:R-SCE-6781823|dip:DIP-1896N|mint:P28519 - crc64:26891AD9CA1E3E2B crc64:A90FA9CAA6F3EA52 figure legend:Fig. 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2009/08/14 2014/10/16 rogid:HuIiO90qNTbc/EU4wnsunA1WoMI559292 rogid:Sl/UtzvA/TKpvV7NnH/6XSXdvuE559292 intact-crc:F0B387E69BBE23D9|rigid:yNbV0mTHzlaiWmMU5mG38zt4ZdQ false - 35s radiolabel:?-? - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) uniprotkb:P06838 uniprotkb:P06777 intact:EBI-14637|uniprotkb:D6W0J0|ensemblfungi:YML095C intact:EBI-14752|uniprotkb:D6W3Z0|ensemblfungi:YPL022W psi-mi:rad10_yeast(display_long)|uniprotkb:YML095C(locus name)|uniprotkb:RAD10(gene name)|psi-mi:RAD10(display_short) psi-mi:rad1_yeast(display_long)|uniprotkb:YPL022W(locus name)|uniprotkb:RAD1(gene name)|psi-mi:RAD1(display_short) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Guzder et al. (1996) pubmed:8621533|imex:IM-20338 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2410723|imex:IM-20338-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013614.1|sgd:S000004560|ensemblfungi:YML095C(gene)|ensemblfungi:YML095C_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:0070522"(ERCC4-ERCC1 complex)|go:"GO:0070914"(UV-damage excision repair)|interpro:IPR004579(DNA repair protein rad10)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|go:"GO:0000735"(removal of nonhomologous ends)|dip:DIP-1545N|mint:P06838 refseq:NP_015303.1|sgd:S000005943|ensemblfungi:YPL022W(gene)|ensemblfungi:YPL022W_mRNA(transcript)|go:"GO:0000110"(nucleotide-excision repair factor 1 complex)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000712"(resolution of meiotic recombination intermediates)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000735"(removal of nonhomologous ends)|go:"GO:0000736"(double-strand break repair via single-strand annealing, removal of nonhomologous ends)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006277"(DNA amplification)|go:"GO:0006296"(nucleotide-excision repair, DNA incision, 5'-to lesion)|go:"GO:0006312"(mitotic recombination)|go:"GO:1901255"(nucleotide-excision repair involved in interstrand cross-link repair)|interpro:IPR006166(DNA repair nuclease, XPF-type/Helicase)|interpro:IPR006167(DNA repair protein)|interpro:IPR010994(RuvA domain 2-like)|interpro:IPR011335(Restriction endonuclease, type II-like, core)|reactome:R-SCE-6782135|go:"GO:0004520"(endodeoxyribonuclease activity)|dip:DIP-2424N|mint:P06777 - crc64:26891AD9CA1E3E2B crc64:06FDA601F3F59B10 figure legend:Fig. 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2009/08/14 2014/10/16 rogid:HuIiO90qNTbc/EU4wnsunA1WoMI559292 rogid:7L6RpWb8IxXAlO/CW7G1svlR+Og559292 intact-crc:F0B387E69BBE23D9|rigid:yNbV0mTHzlaiWmMU5mG38zt4ZdQ false - - - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography)