#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:P0A850	uniprotkb:P02413	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-543017|uniprotkb:Q2M6W6|ensemblbacteria:AAC76326|ensemblbacteria:BAE77990	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl15_ecoli(display_long)|uniprotkb:rplO(gene name)|psi-mi:rplO(display_short)|uniprotkb:Large ribosomal subunit protein uL15(gene name synonym)|uniprotkb:JW3263(locus name)|uniprotkb:b3301(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6QDW|rcsb pdb:6QUL|rcsb pdb:6S0K|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6PCT|rcsb pdb:6PCS|rcsb pdb:6WDC|ensemblbacteria:AAC76326(transcript)|ensemblbacteria:b3301(gene)|ensemblbacteria:BAE77990(gene)|ensemblbacteria:BAE77990(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:5AFI|rcsb pdb:5AKA|rcsb pdb:5GAD|rcsb pdb:5GAE|rcsb pdb:5GAF|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|refseq:NP_417760.1|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4UY8|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:3JCN|rcsb pdb:4V6Z|rcsb pdb:4V70|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR001196(Ribosomal protein L15)|interpro:IPR005749(Ribosomal protein L15, bacterial-type)|interpro:IPR021131|interpro:IPR030878|interpro:IPR036227|rcsb pdb:1ML5|rcsb pdb:2J28|rcsb pdb:2RDO|rcsb pdb:3BBX|rcsb pdb:3J5L|rcsb pdb:3J7Z|rcsb pdb:3J8G|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4V71|rcsb pdb:4WWW|rcsb pdb:5MGP|rcsb pdb:5NCO|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6DNC|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GBZ|rcsb pdb:6GC0|rcsb pdb:6GC4|rcsb pdb:6GC6|rcsb pdb:6GC7|rcsb pdb:6GC8|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I0Y|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6PC5|rcsb pdb:6PC6|rcsb pdb:6PC7|rcsb pdb:6PC8|rcsb pdb:6PCH|rcsb pdb:6PCQ|rcsb pdb:6PCR|refseq:WP_001238914.1|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6WYV|rcsb pdb:6XZ7|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6YS3|rcsb pdb:6YSR|rcsb pdb:6YSS|rcsb pdb:6YST|rcsb pdb:6YSU|rcsb pdb:6ZTJ|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7BL2|rcsb pdb:7BL3|rcsb pdb:7BL4|rcsb pdb:7BL5|rcsb pdb:7BL6|rcsb pdb:7BV8|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|dip:DIP-10752N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:ALpjkEugfGvTElyhCTXVYRPMcg883333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A6Q3	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-369375|uniprotkb:P18391|uniprotkb:Q59383|ensemblbacteria:AAC74040|ensemblbacteria:BAA35712	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:faba_ecoli(display_long)|uniprotkb:fabA(gene name)|psi-mi:fabA(display_short)|uniprotkb:Beta-hydroxydecanoyl thioester dehydrase(gene name synonym)|uniprotkb:3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA(gene name synonym)|uniprotkb:Trans-2-decenoyl-[acyl-carrier-protein] isomerase(gene name synonym)|uniprotkb:JW0937(locus name)|uniprotkb:b0954(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:WP_000227927.1|refseq:NP_415474.1|ensemblbacteria:AAC74040(transcript)|ensemblbacteria:b0954(gene)|ensemblbacteria:BAA35712(gene)|go:"GO:0004317"(3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006633"(fatty acid biosynthetic process)|go:"GO:0008610"(lipid biosynthetic process)|go:"GO:0008659"("(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity")|go:"GO:0008693"(3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity)|go:"GO:0034017"(trans-2-decenoyl-acyl-carrier-protein isomerase activity)|go:"GO:0047451"(3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity)|interpro:IPR010083("Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA")|interpro:IPR013114("Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ")|interpro:IPR029069|rcsb pdb:1MKA|rcsb pdb:1MKB|rcsb pdb:4KEH|ensemblbacteria:BAA35712(transcript)|dip:DIP-31864N	go:"GO:0005737"(cytoplasm)	-	crc64:DFC508352D2DCF2C	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:FFbdgOuo35JLG2J2KZf2hCaKz6M83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0AG82	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-555320|uniprotkb:P06128|uniprotkb:P76744|uniprotkb:Q2M846|ensemblbacteria:AAC76751|ensemblbacteria:BAE77560	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:psts_ecoli(display_long)|uniprotkb:pstS(gene name)|psi-mi:pstS(display_short)|uniprotkb:phoS(gene name synonym)|uniprotkb:b3728(locus name)|uniprotkb:JW3706(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_418184.1|refseq:WP_000867146.1|dip:DIP-48241N|ensemblbacteria:AAC76751(transcript)|ensemblbacteria:b3728(gene)|ensemblbacteria:BAE77560(gene)|ensemblbacteria:BAE77560(transcript)|go:"GO:0006817"(phosphate ion transport)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009314"(response to radiation)|go:"GO:0010921"(regulation of phosphatase activity)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0035435"(phosphate ion transmembrane transport)|go:"GO:0042301"(phosphate ion binding)|interpro:IPR005673(Periplasmic phosphate binding protein)|interpro:IPR024370|rcsb pdb:1A40|rcsb pdb:1A54|rcsb pdb:1A55|rcsb pdb:1IXG|rcsb pdb:1IXH|rcsb pdb:1IXI|rcsb pdb:1OIB|rcsb pdb:1PBP|rcsb pdb:1QUI|rcsb pdb:1QUJ|rcsb pdb:1QUK|rcsb pdb:1QUL|rcsb pdb:2ABH|go:"GO:0043190"("ATP-binding cassette (ABC) transporter complex")	go:"GO:0005737"(cytoplasm)	-	crc64:867DA7199C2C87ED	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:1y1EbgzweOrMXFPTOA3LUOUiE0083333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P33136	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-1121664|ensemblbacteria:AAC74132|ensemblbacteria:BAA35846	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:opgg_ecoli(display_long)|uniprotkb:mdoG(gene name)|psi-mi:mdoG(display_short)|uniprotkb:opgG(gene name synonym)|uniprotkb:b1048(locus name)|uniprotkb:JW1035(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	ensemblbacteria:AAC74132(transcript)|ensemblbacteria:b1048(gene)|ensemblbacteria:BAA35846(gene)|ensemblbacteria:BAA35846(transcript)|go:"GO:0003824"(catalytic activity)|go:"GO:0006970"(response to osmotic stress)|go:"GO:0030246"(carbohydrate binding)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0051274"(beta-glucan biosynthetic process)|interpro:IPR007444(Glucan biosynthesis, periplasmic, MdoG C-terminal)|interpro:IPR011013(Glycoside hydrolase-type carbohydrate-binding)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR014438(Glucan biosynthesis, periplasmic, MdoG)|interpro:IPR014718(Glycoside hydrolase-type carbohydrate-binding, subgroup)|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR023704|rcsb pdb:1TXK|refseq:WP_001343212.1|refseq:NP_415566.1|dip:DIP-10177N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:6BEfomcSN4tFgRXEfssL7Ze8ops83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0AGJ5	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-547368|uniprotkb:P33635|uniprotkb:P76999|ensemblbacteria:AAC75634|ensemblbacteria:BAA16467	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:yfif_ecoli(display_long)|uniprotkb:yfiF(gene name)|psi-mi:yfiF(display_short)|uniprotkb:b2581(locus name)|uniprotkb:JW2565(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417076.1|refseq:WP_000997403.1|ensemblbacteria:AAC75634(transcript)|ensemblbacteria:b2581(gene)|ensemblbacteria:BAA16467(gene)|ensemblbacteria:BAA16467(transcript)|go:"GO:0001510"(RNA methylation)|go:"GO:0003723"(RNA binding)|go:"GO:0005829"(cytosol)|go:"GO:0006396"(RNA processing)|go:"GO:0008173"(RNA methyltransferase activity)|interpro:IPR001537(tRNA/rRNA methyltransferase, SpoU)|interpro:IPR004441(RNA methyltransferase TrmH, group 3)|interpro:IPR013123(RNA 2-O ribose methyltransferase, substrate binding)|interpro:IPR016479(tRNA/rRNA methyltransferase, YfiF, predicted)|interpro:IPR029026|interpro:IPR029028|interpro:IPR029064|dip:DIP-47835N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:AbXApPA5OdwTHQrq0VpBzJsc9dk83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P69741	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-552619|uniprotkb:Q2M9J8|uniprotkb:Q46847|ensemblbacteria:AAC76033|ensemblbacteria:BAE77058	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:mbht_ecoli(display_long)|uniprotkb:yghV(gene name synonym)|uniprotkb:Membrane-bound hydrogenase 2 small subunit(gene name synonym)|uniprotkb:NiFe hydrogenase(gene name synonym)|uniprotkb:hybO(gene name)|psi-mi:hybO(display_short)|uniprotkb:b2997(locus name)|uniprotkb:JW2965(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417471.1|refseq:WP_000145410.1|ensemblbacteria:AAC76033(transcript)|ensemblbacteria:b2997(gene)|ensemblbacteria:BAE77058(gene)|ensemblbacteria:BAE77058(transcript)|go:"GO:0008901"(ferredoxin hydrogenase activity)|go:"GO:0009055"(electron transfer activity)|go:"GO:0009061"(anaerobic respiration)|go:"GO:0009375"(ferredoxin hydrogenase complex)|go:"GO:0016020"(membrane)|go:"GO:0031236"(extrinsic component of periplasmic side of plasma membrane)|go:"GO:0033748"("hydrogenase (acceptor) activity")|go:"GO:0042597"(periplasmic space)|go:"GO:0044569"([Ni-Fe] hydrogenase complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0051536"(iron-sulfur cluster binding)|go:"GO:0051538"(3 iron, 4 sulfur cluster binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR001821([Ni-Fe]-hydrogenase, small subunit)|interpro:IPR006137(NADH ubiquinone oxidoreductase, 20 kDa subunit)|interpro:IPR006311(Twin-arginine translocation pathway signal)|interpro:IPR019546|interpro:IPR027394|interpro:IPR037024|interpro:IPR037148|rcsb pdb:6EHQ|rcsb pdb:6EHS|rcsb pdb:6EN9|rcsb pdb:6G7M|rcsb pdb:6GAM|rcsb pdb:6GAN|rcsb pdb:6SYO|rcsb pdb:6SYX|rcsb pdb:6SZD|rcsb pdb:6SZK|dip:DIP-36024N	go:"GO:0005737"(cytoplasm)	-	crc64:C5821096BBAF9C66	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:q3mPMVF7Qd4HSkzFGtPodT7/4Bo83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0ADQ2	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-543390|uniprotkb:P32148|uniprotkb:Q2M8I5|ensemblbacteria:AAD13450|ensemblbacteria:BAE77421	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:faby_ecoli(display_long)|uniprotkb:fabY(gene name)|psi-mi:fabY(display_short)|uniprotkb:yiiD(gene name synonym)|uniprotkb:JW3859(locus name)|uniprotkb:b3888(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_418324.1|ensemblbacteria:AAD13450(transcript)|ensemblbacteria:b3888(gene)|ensemblbacteria:BAE77421(gene)|ensemblbacteria:BAE77421(transcript)|go:"GO:0004343"(glucosamine 6-phosphate N-acetyltransferase activity)|go:"GO:0006048"(UDP-N-acetylglucosamine biosynthetic process)|go:"GO:0006633"(fatty acid biosynthetic process)|go:"GO:0016747"(acyltransferase activity, transferring groups other than amino-acyl groups)|interpro:IPR000182(GCN5-related N-acetyltransferase)|interpro:IPR012660(Thioesterase, putative)|interpro:IPR016181(Acyl-CoA N-acyltransferase)|interpro:IPR029069|interpro:IPR039143|dip:DIP-48207N	go:"GO:0005737"(cytoplasm)	-	caution:This sequence has been withdrawn from Uniprot.|crc64:42411FE2B0D21175	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:Lko8pT9egD1E/Xwa/qoyA8o8d/U83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0AFD1	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-1117136|uniprotkb:P33601|ensemblbacteria:AAC75345|ensemblbacteria:BAA16114	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:nuoe_ecoli(display_long)|uniprotkb:nuoE(gene name)|psi-mi:nuoE(display_short)|uniprotkb:b2285(locus name)|uniprotkb:JW2280(locus name)|uniprotkb:NADH dehydrogenase I subunit E(gene name synonym)|uniprotkb:NDH-1 subunit E(gene name synonym)|uniprotkb:NUO5(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:WP_000545042.1|refseq:NP_416788.1|go:"GO:0051537"(2 iron, 2 sulfur cluster binding)|interpro:IPR002023("NADH dehydrogenase (ubiquinone), 24 kDa subunit")|interpro:IPR036249|interpro:IPR041921|interpro:IPR042128|go:"GO:0046872"(metal ion binding)|go:"GO:0048038"(quinone binding)|ensemblbacteria:AAC75345(transcript)|ensemblbacteria:b2285(gene)|ensemblbacteria:BAA16114(gene)|ensemblbacteria:BAA16114(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0016491"(oxidoreductase activity)|go:"GO:0030964"(NADH dehydrogenase complex)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|dip:DIP-35917N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:Q6cIFsVIF/P+aGlmGPmWeYm59jM83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P69828	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-552766|uniprotkb:P37187|uniprotkb:P76413|uniprotkb:P94757|uniprotkb:P97243|ensemblbacteria:AAC75155|ensemblbacteria:BAA15957|ensemblbacteria:BAA15964	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:ptka_ecoli(display_long)|uniprotkb:gatA(gene name)|psi-mi:gatA(display_short)|uniprotkb:EIIB-Gat(gene name synonym)|uniprotkb:Galactitol-specific phosphotransferase enzyme IIA component(gene name synonym)|uniprotkb:JW2078/JW2081(locus name)|uniprotkb:b2094(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_416597.1|refseq:WP_000182899.1|dip:DIP-47900N|ensemblbacteria:AAC75155(transcript)|ensemblbacteria:b2094(gene)|ensemblbacteria:BAA15957(gene)|ensemblbacteria:BAA15957(transcript)|ensemblbacteria:BAA15964(gene)|ensemblbacteria:BAA15964(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0009401"(phosphoenolpyruvate-dependent sugar phosphotransferase system)|go:"GO:0015796"(galactitol transport)|go:"GO:0016301"(kinase activity)|go:"GO:0019402"(galactitol metabolic process)|go:"GO:0030295"(protein kinase activator activity)|go:"GO:0032412"(regulation of ion transmembrane transporter activity)|go:"GO:0090584"(protein-phosphocysteine-galactitol-phosphotransferase system transporter activity)|interpro:IPR002178(Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2)|interpro:IPR016152(Phosphotransferase/anion transporter)	go:"GO:0005737"(cytoplasm)	-	caution:This sequence has been withdrawn from Uniprot.|crc64:1A760676BE5FB61D	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:O+FBijucZ+ffo0yyZHAjNE4exRY83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A6F1	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-546107|ensemblbacteria:AAC73143|ensemblbacteria:BAB96601|uniprotkb:P00907	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:cara_ecoli(display_long)|uniprotkb:carA(gene name)|psi-mi:carA(display_short)|uniprotkb:pyrA(gene name synonym)|uniprotkb:b0032(locus name)|uniprotkb:Carbamoyl-phosphate synthetase glutamine chain(gene name synonym)|uniprotkb:JW0030(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	ensemblbacteria:AAC73143(transcript)|ensemblbacteria:b0032(gene)|ensemblbacteria:BAB96601(gene)|ensemblbacteria:BAB96601(transcript)|go:"GO:0004088"("carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005951"(carbamoyl-phosphate synthase complex)|go:"GO:0006207"('de novo' pyrimidine nucleobase biosynthetic process)|go:"GO:0006526"(arginine biosynthetic process)|go:"GO:0006541"(glutamine metabolic process)|go:"GO:0006807"(nitrogen compound metabolic process)|go:"GO:0044205"('de novo' UMP biosynthetic process)|interpro:IPR002474(Carbamoyl phosphate synthase, small subunit, N-terminal)|interpro:IPR006274(Carbamoyl phosphate synthase, small subunit)|interpro:IPR017926|interpro:IPR029062|interpro:IPR035686|interpro:IPR036480|rcsb pdb:1A9X|rcsb pdb:1BXR|rcsb pdb:1C30|rcsb pdb:1C3O|rcsb pdb:1CE8|rcsb pdb:1CS0|rcsb pdb:1JDB|rcsb pdb:1KEE|rcsb pdb:1M6V|rcsb pdb:1T36|refseq:NP_414573.1|refseq:WP_000597260.1|dip:DIP-35412N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:R50k6IyBn3KrvO5c5PElb0GX/lk83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P00968	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-546118|ensemblbacteria:AAC73144|ensemblbacteria:BAB96602	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:carb_ecoli(display_long)|uniprotkb:carB(gene name)|psi-mi:carB(display_short)|uniprotkb:pyrA(gene name synonym)|uniprotkb:b0033(locus name)|uniprotkb:Carbamoyl-phosphate synthetase ammonia chain(gene name synonym)|uniprotkb:JW0031(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	ensemblbacteria:AAC73144(transcript)|ensemblbacteria:b0033(gene)|ensemblbacteria:BAB96602(gene)|ensemblbacteria:BAB96602(transcript)|go:"GO:0000166"(nucleotide binding)|go:"GO:0004087"("carbamoyl-phosphate synthase (ammonia) activity")|go:"GO:0004088"("carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005951"(carbamoyl-phosphate synthase complex)|go:"GO:0006526"(arginine biosynthetic process)|go:"GO:0006541"(glutamine metabolic process)|go:"GO:0006807"(nitrogen compound metabolic process)|go:"GO:0008652"(cellular amino acid biosynthetic process)|go:"GO:0016597"(amino acid binding)|go:"GO:0019856"(pyrimidine nucleobase biosynthetic process)|go:"GO:0044205"('de novo' UMP biosynthetic process)|go:"GO:0046872"(metal ion binding)|interpro:IPR005479(Carbamoyl phosphate synthetase, large subunit, ATP-binding)|interpro:IPR005480(Carbamoyl phosphate synthetase, large subunit, oligomerisation)|interpro:IPR005483(Carbamoyl phosphate synthase, large subunit)|interpro:IPR006275(Carbamoyl phosphate synthase, large subunit, glutamine-dependent)|interpro:IPR011607(MGS-like)|interpro:IPR011761(ATP-grasp fold)|interpro:IPR016185(PreATP-grasp-like fold)|interpro:IPR033937|interpro:IPR036897|interpro:IPR036914|rcsb pdb:1A9X|rcsb pdb:1BXR|rcsb pdb:1C30|rcsb pdb:1C3O|rcsb pdb:1CE8|rcsb pdb:1CS0|rcsb pdb:1JDB|rcsb pdb:1KEE|rcsb pdb:1M6V|rcsb pdb:1T36|refseq:NP_414574.1|refseq:WP_001126348.1|dip:DIP-1025N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:v4ATo4+Ge+q27kVj8F36bTEu2Gw83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P23331	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-370240|uniprotkb:Q0H0G7|ensemblbacteria:AAC74320|ensemblbacteria:BAA36118	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:kith_ecoli(display_long)|uniprotkb:tdk(gene name)|psi-mi:tdk(display_short)|uniprotkb:b1238(locus name)|uniprotkb:JW1226(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_415754.1|interpro:IPR001267(Thymidine kinase)|interpro:IPR020633|refseq:WP_000068077.1|ensemblbacteria:AAC74320(transcript)|ensemblbacteria:b1238(gene)|ensemblbacteria:BAA36118(gene)|ensemblbacteria:BAA36118(transcript)|go:"GO:0004797"(thymidine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0036198"(dTMP salvage)|go:"GO:0042802"(identical protein binding)|go:"GO:0046104"(thymidine metabolic process)|go:"GO:0071897"(DNA biosynthetic process)|interpro:IPR027417	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:2quPV5IZjIIBPcEDQR8C8mU9Edc83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P32664	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-2463443|uniprotkb:Q2M8T3|uniprotkb:Q6BEX6|ensemblbacteria:AAT48238|ensemblbacteria:BAE77323	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:nudc_ecoli(display_long)|uniprotkb:nudC(gene name)|psi-mi:nudC(display_short)|uniprotkb:yjaD(gene name synonym)|uniprotkb:b3996(locus name)|uniprotkb:JW5548(locus name)|uniprotkb:NADH pyrophosphatase(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:WP_000373940.1|refseq:YP_026280.1|interpro:IPR022925|interpro:IPR020084|interpro:IPR000086(NUDIX hydrolase, core)|interpro:IPR015797(NUDIX)|interpro:IPR015376(Zinc ribbon, NADH pyrophosphatase)|rcsb pdb:1VK6|rcsb pdb:2GB5|rcsb pdb:5ISY|rcsb pdb:5IW4|rcsb pdb:5IW5|ensemblbacteria:AAT48238(transcript)|ensemblbacteria:b3996(gene)|ensemblbacteria:BAE77323(gene)|ensemblbacteria:BAE77323(transcript)|go:"GO:0000210"(NAD+ diphosphatase activity)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0005829"(cytosol)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0006734"(NADH metabolic process)|go:"GO:0006742"(NADP catabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0019677"(NAD catabolic process)|go:"GO:0030145"(manganese ion binding)|go:"GO:0034661"(ncRNA catabolic process)|go:"GO:0035529"(NADH pyrophosphatase activity)|go:"GO:0048255"(mRNA stabilization)|go:"GO:0110153"("RNA NAD-cap (NMN-forming) hydrolase activity")|go:"GO:0110155"(NAD-cap decapping)	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:HcF8iubXnHFJ1fSXC4yslfk9w7I83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A7Y0	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-557336|uniprotkb:P06141|uniprotkb:P05797|uniprotkb:Q2MAG3|ensemblbacteria:AAC75620|ensemblbacteria:BAE76743	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rnc_ecoli(display_long)|uniprotkb:Ribonuclease III(gene name synonym)|uniprotkb:rnc(gene name)|psi-mi:rnc(display_short)|uniprotkb:b2567(locus name)|uniprotkb:JW2551(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417062.1|refseq:WP_001068343.1|dip:DIP-48223N|ensemblbacteria:AAC75620(transcript)|ensemblbacteria:b2567(gene)|ensemblbacteria:BAE76743(gene)|ensemblbacteria:BAE76743(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0004525"(ribonuclease III activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0006396"(RNA processing)|go:"GO:0006397"(mRNA processing)|go:"GO:0008033"(tRNA processing)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0019843"(rRNA binding)|go:"GO:0019899"(enzyme binding)|interpro:IPR000999(Ribonuclease III)|interpro:IPR011907(Ribonuclease III, bacterial)|interpro:IPR014720(Double-stranded RNA-binding-like)|interpro:IPR036389	go:"GO:0005737"(cytoplasm)	-	crc64:D9E2858F2E0AA3A5	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:ZEF1CfUw5uFjTfuIMli/MsXeBo083333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P00561	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-549097|uniprotkb:Q47659|uniprotkb:Q6LEL0|ensemblbacteria:AAC73113|ensemblbacteria:BAB96579	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:ak1h_ecoli(display_long)|uniprotkb:thrA(gene name)|psi-mi:thrA(display_short)|uniprotkb:thrA1(gene name synonym)|uniprotkb:thrA2(gene name synonym)|uniprotkb:b0002(locus name)|uniprotkb:JW0001(locus name)|uniprotkb:Aspartokinase I/homoserine dehydrogenase I(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_414543.1|refseq:WP_001264707.1|dip:DIP-2907N|ensemblbacteria:AAC73113(transcript)|ensemblbacteria:b0002(gene)|ensemblbacteria:BAB96579(gene)|ensemblbacteria:BAB96579(transcript)|go:"GO:0004072"(aspartate kinase activity)|go:"GO:0004412"(homoserine dehydrogenase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0009088"(threonine biosynthetic process)|go:"GO:0009089"(lysine biosynthetic process via diaminopimelate)|go:"GO:0009090"(homoserine biosynthetic process)|go:"GO:0050661"(NADP binding)|interpro:IPR001048(Aspartate/glutamate/uridylate kinase)|interpro:IPR001341(Aspartate kinase region)|interpro:IPR001342(Homoserine dehydrogenase, catalytic)|interpro:IPR002912(Amino acid-binding ACT)|interpro:IPR005106(Aspartate/homoserine dehydrogenase, NAD-binding)|interpro:IPR011147(Bifunctional aspartokinase/homoserine dehydrogenase I)|interpro:IPR019811|interpro:IPR027795|interpro:IPR036291|interpro:IPR036393|interpro:IPR041743|rcsb pdb:6MX1|interpro:IPR018042	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:PE6b47P4/D5kokcokmDWjbQXM1k83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P45425	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-2463425|uniprotkb:Q2M8Z1|ensemblbacteria:AAC76254|ensemblbacteria:BAE77265	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:nank_ecoli(display_long)|uniprotkb:nanK(gene name)|psi-mi:nanK(display_short)|uniprotkb:yhcI(gene name synonym)|uniprotkb:N-acetyl-D-mannosamine kinase(gene name synonym)|uniprotkb:ManNAc kinase(gene name synonym)|uniprotkb:b3222(locus name)|uniprotkb:JW5538(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:WP_000209011.1|refseq:NP_417689.4|dip:DIP-12282N|ensemblbacteria:AAC76254(transcript)|ensemblbacteria:b3222(gene)|ensemblbacteria:BAE77265(gene)|ensemblbacteria:BAE77265(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0006051"(N-acetylmannosamine metabolic process)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009384"(N-acylmannosamine kinase activity)|go:"GO:0019262"(N-acetylneuraminate catabolic process)|interpro:IPR000600(ROK)|interpro:IPR023945|interpro:IPR043129|rcsb pdb:2AA4	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:NhXO8W/lTnP3Kf1eeiHyfUaECYA83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P45578	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-562313|ensemblbacteria:AAC75734|ensemblbacteria:BAA16549|uniprotkb:P77134|uniprotkb:P77805	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:luxs_ecoli(display_long)|uniprotkb:ygaG(gene name synonym)|uniprotkb:Autoinducer-2 production protein LuxS(gene name synonym)|uniprotkb:AI-2 synthesis protein(gene name synonym)|uniprotkb:luxS(gene name)|psi-mi:luxS(display_short)|uniprotkb:b2687(locus name)|uniprotkb:JW2662(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417172.1|ensemblbacteria:AAC75734(transcript)|ensemblbacteria:b2687(gene)|ensemblbacteria:BAA16549(gene)|ensemblbacteria:BAA16549(transcript)|go:"GO:0005506"(iron ion binding)|go:"GO:0005829"(cytosol)|go:"GO:0009372"(quorum sensing)|go:"GO:0019284"(L-methionine salvage from S-adenosylmethionine)|go:"GO:0043768"(S-ribosylhomocysteine lyase activity)|interpro:IPR003815("S-ribosylhomocysteinase (LuxS)")|interpro:IPR011249(Metalloenzyme, LuxS/M16 peptidase-like, metal-binding)|interpro:IPR037005|refseq:WP_001130211.1|dip:DIP-10131N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:JzX27iCH2rG5FRbGnAJ6Q8atsI483333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P77791	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-561926|ensemblbacteria:AAC73561|ensemblbacteria:BAE76238|uniprotkb:Q2MBW8	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:maa_ecoli(display_long)|uniprotkb:ylaD(gene name synonym)|uniprotkb:Maltose transacetylase(gene name synonym)|uniprotkb:maa(gene name)|psi-mi:maa(display_short)|uniprotkb:b0459(locus name)|uniprotkb:JW0448(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_414992.1|ensemblbacteria:AAC73561(transcript)|ensemblbacteria:b0459(gene)|ensemblbacteria:BAE76238(gene)|ensemblbacteria:BAE76238(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008374"(O-acyltransferase activity)|go:"GO:0008925"(maltose O-acetyltransferase activity)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|interpro:IPR001451(Bacterial transferase hexapeptide repeat)|interpro:IPR011004(Trimeric LpxA-like)|interpro:IPR018357|interpro:IPR024688|rcsb pdb:1OCX|rcsb pdb:6AG8|refseq:WP_000102564.1|dip:DIP-10140N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:18JM+DVn3fEXwSP+t7Daldsr9NU83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0AFI7	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-1120324|uniprotkb:P28225|ensemblbacteria:AAC74710|ensemblbacteria:BAA15399	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:pdxh_ecoli(display_long)|uniprotkb:PNP/PMP oxidase(gene name synonym)|uniprotkb:Pyridoxal 5'-phosphate synthase(gene name synonym)|uniprotkb:pdxH(gene name)|psi-mi:pdxH(display_short)|uniprotkb:b1638(locus name)|uniprotkb:JW1630(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:WP_001282319.1|ensemblbacteria:AAC74710(transcript)|ensemblbacteria:b1638(gene)|ensemblbacteria:BAA15399(gene)|ensemblbacteria:BAA15399(transcript)|go:"GO:0004733"(pyridoxamine-phosphate oxidase activity)|go:"GO:0005829"(cytosol)|go:"GO:0008615"(pyridoxine biosynthetic process)|go:"GO:0010181"(FMN binding)|go:"GO:0016491"(oxidoreductase activity)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036001"('de novo' pyridoxal 5'-phosphate biosynthetic process)|go:"GO:0042301"(phosphate ion binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042823"(pyridoxal phosphate biosynthetic process)|go:"GO:1902444"(riboflavin binding)|interpro:IPR000659(Pyridoxamine 5'-phosphate oxidase)|interpro:IPR011576(Pyridoxamine 5'-phosphate oxidase-related, FMN-binding core)|interpro:IPR012349(FMN-binding split barrel)|interpro:IPR019576|interpro:IPR019740|rcsb pdb:1DNL|rcsb pdb:1G76|rcsb pdb:1G77|rcsb pdb:1G78|rcsb pdb:1G79|rcsb pdb:1JNW|rcsb pdb:1WV4|refseq:NP_416155.1|dip:DIP-48024N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:XaVpDFiO5Kf2hTn+7dcpfx857e883333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P18335	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-906975|uniprotkb:Q2M725|ensemblbacteria:AAC76384|ensemblbacteria:BAE77931	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:argd_ecoli(display_long)|uniprotkb:argD(gene name)|psi-mi:argD(display_short)|uniprotkb:dapC(gene name synonym)|uniprotkb:dtu(gene name synonym)|uniprotkb:b3359(locus name)|uniprotkb:JW3322(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417818.1|refseq:WP_000963792.1|dip:DIP-9138N|ensemblbacteria:AAC76384(transcript)|ensemblbacteria:b3359(gene)|ensemblbacteria:BAE77931(gene)|ensemblbacteria:BAE77931(transcript)|go:"GO:0003992"("N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity")|go:"GO:0005737"(cytoplasm)|go:"GO:0009016"(succinyldiaminopimelate transaminase activity)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0033359"(lysine biosynthetic process via diaminopimelate and N-succinyl-2-amino-6-ketopimelate)|go:"GO:0042450"(arginine biosynthetic process via ornithine)|go:"GO:0042802"(identical protein binding)|interpro:IPR004636(Acetylornithine and succinylornithine aminotransferase)|interpro:IPR005814(Aminotransferase class-III)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015422(Pyridoxal phosphate-dependent transferase, major region, subdomain 2)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR017652(Succinylornithine transaminase family)	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:s/LzEV60gzNoEX5JgQbaULkqRRI83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P07464	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-1115948|uniprotkb:P77862|uniprotkb:Q2MC82|ensemblbacteria:AAC73445|ensemblbacteria:BAE76124	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:thga_ecoli(display_long)|uniprotkb:Thiogalactoside acetyltransferase(gene name synonym)|uniprotkb:lacA(gene name)|psi-mi:lacA(display_short)|uniprotkb:Thiogalactoside transacetylase(gene name synonym)|uniprotkb:JW0333(locus name)|uniprotkb:b0342(locus name)|uniprotkb:"Acetyl-CoA:galactoside 6-O-acetyltransferase"(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:WP_001335915.1|ensemblbacteria:AAC73445(transcript)|ensemblbacteria:b0342(gene)|ensemblbacteria:BAE76124(gene)|ensemblbacteria:BAE76124(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005989"(lactose biosynthetic process)|go:"GO:0008870"(galactoside O-acetyltransferase activity)|go:"GO:0042802"(identical protein binding)|interpro:IPR001451(Bacterial transferase hexapeptide repeat)|interpro:IPR011004(Trimeric LpxA-like)|interpro:IPR018357|interpro:IPR024688|interpro:IPR039369|rcsb pdb:1KQA|rcsb pdb:1KRR|rcsb pdb:1KRU|rcsb pdb:1KRV|refseq:NP_414876.1|dip:DIP-10078N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:/vnj2RjstCQxySD+6C2FMEkurFE83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A9S3	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-1127517|uniprotkb:P37190|uniprotkb:P76410|ensemblbacteria:AAC75152|ensemblbacteria:BAA15954	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:gatd_ecoli(display_long)|uniprotkb:gatD(gene name)|psi-mi:gatD(display_short)|uniprotkb:b2091(locus name)|uniprotkb:JW2075(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_416594.1|refseq:WP_000844219.1|ensemblbacteria:AAC75152(transcript)|ensemblbacteria:b2091(gene)|ensemblbacteria:BAA15954(gene)|ensemblbacteria:BAA15954(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008868"(galactitol-1-phosphate 5-dehydrogenase activity)|go:"GO:0019404"(galactitol catabolic process)|go:"GO:0042802"(identical protein binding)|interpro:IPR002328(Alcohol dehydrogenase, zinc-containing, conserved site)|interpro:IPR013149(Alcohol dehydrogenase, zinc-binding)|interpro:IPR013154(Alcohol dehydrogenase GroES-like)|interpro:IPR020843|interpro:IPR036291|rcsb pdb:4A2C|rcsb pdb:4UEJ|rcsb pdb:4UEK|rcsb pdb:4UEO|interpro:IPR011032(GroES-like)|dip:DIP-47890N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:5bykEQIPcN0iMv//4e5XeUZAj4U83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P22106	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-549123|ensemblbacteria:AAC73768|ensemblbacteria:BAA35317	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:asnb_ecoli(display_long)|uniprotkb:asnB(gene name)|psi-mi:asnB(display_short)|uniprotkb:b0674(locus name)|uniprotkb:JW0660(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_415200.1|refseq:WP_000337077.1|dip:DIP-9177N|ensemblbacteria:AAC73768(transcript)|ensemblbacteria:b0674(gene)|ensemblbacteria:BAA35317(gene)|ensemblbacteria:BAA35317(transcript)|go:"GO:0004066"("asparagine synthase (glutamine-hydrolyzing) activity")|go:"GO:0004071"(aspartate-ammonia ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006529"(asparagine biosynthetic process)|go:"GO:0006541"(glutamine metabolic process)|go:"GO:0008652"(cellular amino acid biosynthetic process)|go:"GO:0009063"(cellular amino acid catabolic process)|go:"GO:0016597"(amino acid binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0070981"(L-asparagine biosynthetic process)|interpro:IPR001962(Asparagine synthase)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR017932|interpro:IPR029055|interpro:IPR033738|rcsb pdb:1CT9|interpro:IPR006426(Asparagine synthase, glutamine-hydrolyzing)	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:w4miWscKhGi3Hr3YObMqrzc8ovw83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P36659	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-546131|uniprotkb:P77250|ensemblbacteria:AAC74085|ensemblbacteria:BAA36142	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:cbpa_ecoli(display_long)|uniprotkb:cbpA(gene name)|psi-mi:cbpA(display_short)|uniprotkb:b1000(locus name)|uniprotkb:JW0985(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	ensemblbacteria:AAC74085(transcript)|ensemblbacteria:b1000(gene)|ensemblbacteria:BAA36142(gene)|ensemblbacteria:BAA36142(transcript)|go:"GO:0003681"(bent DNA binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0009295"(nucleoid)|go:"GO:0042026"(protein refolding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051085"(chaperone cofactor-dependent protein refolding)|interpro:IPR001623(Heat shock protein DnaJ, N-terminal)|interpro:IPR002939(Chaperone DnaJ, C-terminal)|interpro:IPR008971(HSP40/DnaJ peptide-binding)|interpro:IPR018253|interpro:IPR023859|interpro:IPR036869|rcsb pdb:2KQX|rcsb pdb:3UCS|refseq:NP_415520.1|refseq:WP_000420621.1|dip:DIP-9249N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:au+UJDfafMe2T7uxIWJWTkCJZkk83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A9S5	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-2463396|uniprotkb:P32665|uniprotkb:P78132|uniprotkb:Q2M8P1|ensemblbacteria:AAC76927|ensemblbacteria:BAE77365	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:glda_ecoli(display_long)|uniprotkb:gldA(gene name)|psi-mi:gldA(display_short)|uniprotkb:b3945(locus name)|uniprotkb:JW5556(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:WP_000374004.1|refseq:NP_418380.4|dip:DIP-47916N|ensemblbacteria:AAC76927(transcript)|ensemblbacteria:b3945(gene)|ensemblbacteria:BAE77365(gene)|ensemblbacteria:BAE77365(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008888"(glycerol dehydrogenase [NAD+] activity)|go:"GO:0019147"("(R)-aminopropanol dehydrogenase activity")|go:"GO:0019588"(anaerobic glycerol catabolic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0051596"(methylglyoxal catabolic process)|interpro:IPR001670(Iron-containing alcohol dehydrogenase)|interpro:IPR016205(Glycerol dehydrogenase)|interpro:IPR018211|rcsb pdb:5ZXL	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:QohhxdZrvbzO2ZFJ4gNnEVZfAf083333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A998	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-908962|uniprotkb:P23887|ensemblbacteria:AAC74975|ensemblbacteria:BAA15728	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:ftna_ecoli(display_long)|uniprotkb:Ferritin-1(gene name synonym)|uniprotkb:ftnA(gene name)|psi-mi:ftnA(display_short)|uniprotkb:ftn(gene name synonym)|uniprotkb:gen-165(gene name synonym)|uniprotkb:rsgA(gene name synonym)|uniprotkb:b1905(locus name)|uniprotkb:JW1893(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_416418.1|refseq:WP_000917208.1|dip:DIP-36198N|ensemblbacteria:AAC74975(transcript)|ensemblbacteria:b1905(gene)|ensemblbacteria:BAA15728(gene)|ensemblbacteria:BAA15728(transcript)|go:"GO:0004322"(ferroxidase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006826"(iron ion transport)|go:"GO:0006880"(intracellular sequestering of iron ion)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008198"(ferrous iron binding)|go:"GO:0008199"(ferric iron binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0071281"(cellular response to iron ion)|interpro:IPR001519(Ferritin, N-terminal)|interpro:IPR008331(Ferritin and Dps)|interpro:IPR009040(Ferritin-like)|interpro:IPR009078(Ferritin/ribonucleotide reductase-like)|interpro:IPR012347(Ferritin-related)|interpro:IPR041719|rcsb pdb:1EUM|rcsb pdb:4XGS|rcsb pdb:4ZTT	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:63nrf86plgjkM3XdW/8DuuuBvU883333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A6V8	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-1128729|uniprotkb:P46880|uniprotkb:P78276|ensemblbacteria:AAC75447|ensemblbacteria:BAA16258	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:glk_ecoli(display_long)|uniprotkb:glk(gene name)|psi-mi:glk(display_short)|uniprotkb:b2388(locus name)|uniprotkb:JW2385(locus name)|uniprotkb:Glucose kinase(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_416889.1|interpro:IPR003836(Glucokinase)|refseq:WP_000170346.1|go:"GO:0005524"(ATP binding)|go:"GO:0005536"(glucose binding)|go:"GO:0005829"(cytosol)|go:"GO:0006096"(glycolytic process)|go:"GO:0004340"(glucokinase activity)|ensemblbacteria:AAC75447(transcript)|ensemblbacteria:b2388(gene)|ensemblbacteria:BAA16258(gene)|ensemblbacteria:BAA16258(transcript)|interpro:IPR043129	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:1O77nAQW4MBCchkNtsDLakhJx2883333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:Q46893	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-1130148|uniprotkb:Q2MA82|ensemblbacteria:AAC75789|ensemblbacteria:BAE76824	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:ispd_ecoli(display_long)|uniprotkb:ispD(gene name)|psi-mi:ispD(display_short)|uniprotkb:b2747(locus name)|uniprotkb:JW2717(locus name)|uniprotkb:ygbP(gene name synonym)|uniprotkb:4-diphosphocytidyl-2C-methyl-D-erythritol synthase(gene name synonym)|uniprotkb:MEP cytidylyltransferase(gene name synonym)|uniprotkb:CDP-ME synthase(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417227.1|interpro:IPR001228(4-diphosphocytidyl-2C-methyl-D-erythritol synthase)|interpro:IPR018294|rcsb pdb:1H3M|rcsb pdb:1I52|rcsb pdb:1INI|rcsb pdb:1INJ|rcsb pdb:1VGT|rcsb pdb:1VGU|rcsb pdb:3N9W|refseq:WP_000246138.1|ensemblbacteria:AAC75789(transcript)|ensemblbacteria:b2747(gene)|ensemblbacteria:BAE76824(gene)|ensemblbacteria:BAE76824(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0005829"(cytosol)|go:"GO:0016114"(terpenoid biosynthetic process)|go:"GO:0019288"(isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0050518"(2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity)|interpro:IPR034683|interpro:IPR029044	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:ZowxorbZFRFQxYtgH46cPmVX0Hs83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P06987	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-1126930|uniprotkb:P78077|ensemblbacteria:AAC75083|ensemblbacteria:BAA15853	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:his7_ecoli(display_long)|uniprotkb:hisB(gene name)|psi-mi:hisB(display_short)|uniprotkb:b2022(locus name)|uniprotkb:JW2004(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_416526.4|refseq:WP_000080105.1|ensemblbacteria:AAC75083(transcript)|ensemblbacteria:b2022(gene)|ensemblbacteria:BAA15853(gene)|ensemblbacteria:BAA15853(transcript)|go:"GO:0000105"(histidine biosynthetic process)|go:"GO:0004401"(histidinol-phosphatase activity)|go:"GO:0004424"(imidazoleglycerol-phosphate dehydratase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR000807(Imidazole glycerol-phosphate dehydratase)|interpro:IPR005954(Histidinol-phosphatase)|interpro:IPR006543(Histidinol-phosphate phosphatase)|interpro:IPR006549(HAD-superfamily hydrolase, subfamily IIIA)|interpro:IPR013954(Polynucleotide kinase 3 phosphatase, central region)|interpro:IPR020565|interpro:IPR020566|interpro:IPR020568|interpro:IPR023214|interpro:IPR036412|interpro:IPR038494|dip:DIP-9901N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:GX4ZPzYvCxBQmHmKGVxwa72rxC883333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P09053	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-2463377|uniprotkb:Q2M7N5|uniprotkb:Q6BF21|ensemblbacteria:AAT48193|ensemblbacteria:BAE77721	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:avta_ecoli(display_long)|uniprotkb:avtA(gene name)|psi-mi:avtA(display_short)|uniprotkb:Alanine--valine transaminase(gene name synonym)|uniprotkb:Transaminase C(gene name synonym)|uniprotkb:b3572(locus name)|uniprotkb:JW5652(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:WP_000144363.1|refseq:YP_026231.1|interpro:IPR004839(Aminotransferase, class I and II)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|ensemblbacteria:AAT48193(transcript)|ensemblbacteria:b3572(gene)|ensemblbacteria:BAE77721(gene)|ensemblbacteria:BAE77721(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008483"(transaminase activity)|go:"GO:0009042"(valine-pyruvate transaminase activity)|go:"GO:0009099"(valine biosynthetic process)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0030632"(D-alanine biosynthetic process)|go:"GO:1901605"(alpha-amino acid metabolic process)	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:DtkGPjnCb6sAmDq1HaEmP5OEcDk83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P06612	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-544172|ensemblbacteria:AAC74356|ensemblbacteria:BAA14811	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:top1_ecoli(display_long)|uniprotkb:topA(gene name)|psi-mi:topA(display_short)|uniprotkb:supX(gene name synonym)|uniprotkb:b1274(locus name)|uniprotkb:DNA topoisomerase I(gene name synonym)|uniprotkb:Omega-protein(gene name synonym)|uniprotkb:Relaxing enzyme(gene name synonym)|uniprotkb:Untwisting enzyme(gene name synonym)|uniprotkb:Swivelase(gene name synonym)|uniprotkb:JW1266(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_415790.1|ensemblbacteria:AAC74356(transcript)|ensemblbacteria:b1274(gene)|ensemblbacteria:BAA14811(gene)|ensemblbacteria:BAA14811(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003916"(DNA topoisomerase activity)|go:"GO:0003917"("DNA topoisomerase type I (single strand cut, ATP-independent) activity")|go:"GO:0005694"(chromosome)|go:"GO:0005829"(cytosol)|go:"GO:0006265"(DNA topological change)|go:"GO:0046872"(metal ion binding)|interpro:IPR000380(DNA topoisomerase, type IA, core)|interpro:IPR003601(DNA topoisomerase, type IA, domain 2)|interpro:IPR003602(DNA topoisomerase, type IA, DNA-binding)|interpro:IPR005733(DNA topoisomerase I, bacterial-type)|interpro:IPR006171(TOPRIM)|interpro:IPR013263(DNA topoisomerase I, zinc ribbon-like, bacterial-type)|interpro:IPR013497(DNA topoisomerase, type IA, central)|interpro:IPR013498(DNA topoisomerase, type IA, zn finger)|interpro:IPR013824(DNA topoisomerase, type IA, central region, subdomain 1)|interpro:IPR013825(DNA topoisomerase, type IA, central region, subdomain 2)|interpro:IPR013826(DNA topoisomerase, type IA, central region, subdomain 3)|interpro:IPR023405|interpro:IPR023406|interpro:IPR028612|interpro:IPR034149|rcsb pdb:1CY0|rcsb pdb:1CY1|rcsb pdb:1CY2|rcsb pdb:1CY4|rcsb pdb:1CY6|rcsb pdb:1CY7|rcsb pdb:1CY8|rcsb pdb:1CY9|rcsb pdb:1CYY|rcsb pdb:1ECL|rcsb pdb:1MW8|rcsb pdb:1MW9|rcsb pdb:1YUA|rcsb pdb:3PWT|rcsb pdb:3PX7|rcsb pdb:4RUL|refseq:WP_001297122.1|dip:DIP-11011N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:jSRFocyetCQEySCbO3VTJT83Ilo83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P05523	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-1124490|uniprotkb:Q2M7U9|ensemblbacteria:AAC76659|ensemblbacteria:BAE77657	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:fpg_ecoli(display_long)|uniprotkb:mutM(gene name)|psi-mi:mutM(display_short)|uniprotkb:fpg(gene name synonym)|uniprotkb:b3635(locus name)|uniprotkb:JW3610(locus name)|uniprotkb:"DNA-(apurinic or apyrimidinic site) lyase MutM"(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:WP_001114543.1|go:"GO:0140078"("class I DNA-(apurinic or apyrimidinic site) endonuclease activity")|interpro:IPR000214(DNA glycosylase/AP lyase, zinc finger domain)|interpro:IPR010663(DNA glycosylase/AP lyase and isoleucyl tRNA synthetase, zinc finger domain)|interpro:IPR010979(Ribosomal protein S13-like, H2TH)|interpro:IPR012319(DNA glycosylase/AP lyase, catalytic domain)|interpro:IPR015886(DNA glycosylase/AP lyase, H2TH DNA-binding)|interpro:IPR015887(DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site)|interpro:IPR020629|interpro:IPR035937|rcsb pdb:1K82|refseq:NP_418092.1|ensemblbacteria:AAC76659(transcript)|ensemblbacteria:b3635(gene)|ensemblbacteria:BAE77657(gene)|ensemblbacteria:BAE77657(transcript)|go:"GO:0000703"(oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003906"("DNA-(apurinic or apyrimidinic site) endonuclease activity")|go:"GO:0004519"(endonuclease activity)|go:"GO:0006284"(base-excision repair)|go:"GO:0006285"(base-excision repair, AP site formation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008534"(oxidized purine nucleobase lesion DNA N-glycosylase activity)|go:"GO:0019104"(DNA N-glycosylase activity)|go:"GO:0034039"(8-oxo-7,8-dihydroguanine DNA N-glycosylase activity)|go:"GO:0046872"(metal ion binding)|dip:DIP-10286N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:6JdiVhqDoiSH9mY/a9PENv8GmbU83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P23003	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-559079|uniprotkb:Q2M8R0|ensemblbacteria:AAC76947|ensemblbacteria:BAE77346	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:trma_ecoli(display_long)|uniprotkb:trmA(gene name)|psi-mi:trmA(display_short)|uniprotkb:"tRNA(m5U54)-methyltransferase"(gene name synonym)|uniprotkb:"tRNA (uracil(54)-C(5))-methyltransferase"(gene name synonym)|uniprotkb:"tmRNA (uracil(341)-C(5))-methyltransferase"(gene name synonym)|uniprotkb:JW3937(locus name)|uniprotkb:b3965(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_418400.1|refseq:WP_000187022.1|dip:DIP-11031N|ensemblbacteria:AAC76947(transcript)|ensemblbacteria:b3965(gene)|ensemblbacteria:BAE77346(gene)|ensemblbacteria:BAE77346(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0005829"(cytosol)|go:"GO:0019843"(rRNA binding)|go:"GO:0030488"(tRNA methylation)|go:"GO:0030697"("S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity")|interpro:IPR010280("(Uracil-5)-methyltransferase")|interpro:IPR011869("tRNA (uracil-5-)-methyltransferase")|interpro:IPR029063|interpro:IPR030390|interpro:IPR030391|rcsb pdb:3BT7	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:yMeAHo1h4LmVO+Fb9gu6UdQzOFc83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A7M2	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-543024|uniprotkb:P02428|uniprotkb:Q2M7V1|ensemblbacteria:AAC76661|ensemblbacteria:BAE77655	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl28_ecoli(display_long)|uniprotkb:rpmB(gene name)|psi-mi:rpmB(display_short)|uniprotkb:Large ribosomal subunit protein bL28(gene name synonym)|uniprotkb:JW3612(locus name)|uniprotkb:b3637(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	rcsb pdb:6YSU|rcsb pdb:6ZTJ|rcsb pdb:6ZTL|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7BL2|rcsb pdb:7BL3|rcsb pdb:7BL4|rcsb pdb:7BL5|rcsb pdb:7BL6|rcsb pdb:7BV8|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4UY8|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:5U9F|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:5AFI|rcsb pdb:5GAD|rcsb pdb:5GAE|rcsb pdb:5GAF|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5MGP|rcsb pdb:5NCO|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|ensemblbacteria:AAC76661(transcript)|ensemblbacteria:b3637(gene)|ensemblbacteria:BAE77655(gene)|ensemblbacteria:BAE77655(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR001383(Ribosomal protein L28)|interpro:IPR026569|interpro:IPR034704|interpro:IPR037147|rcsb pdb:3J5L|rcsb pdb:3J7Z|rcsb pdb:3J8G|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GBZ|rcsb pdb:6GC0|rcsb pdb:6GC4|rcsb pdb:6GC8|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I0Y|rcsb pdb:6I7V|rcsb pdb:6O9K|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6QDW|rcsb pdb:6QUL|rcsb pdb:6S0K|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XZ7|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6YS3|rcsb pdb:6YSR|rcsb pdb:6YSS|refseq:NP_418094.1|refseq:WP_000091955.1|dip:DIP-35745N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:3DurBWVtEZ5NZmoesx2Ff3+2eyI83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0AG67	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-546520|uniprotkb:P02349|uniprotkb:P77352|ensemblbacteria:AAC73997|ensemblbacteria:BAA35655	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rs1_ecoli(display_long)|uniprotkb:rpsA(gene name)|psi-mi:rpsA(display_short)|uniprotkb:ssyF(gene name synonym)|uniprotkb:b0911(locus name)|uniprotkb:JW0894(locus name)|uniprotkb:Bacteriophage Q beta RNA-directed RNA polymerase subunit I(gene name synonym)|uniprotkb:Small ribosomal subunit protein bS1(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	ensemblbacteria:AAC73997(transcript)|ensemblbacteria:b0911(gene)|ensemblbacteria:BAA35655(gene)|ensemblbacteria:BAA35655(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0006412"(translation)|go:"GO:0016020"(membrane)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:2000766"(negative regulation of cytoplasmic translation)|interpro:IPR000110(Ribosomal protein S1)|interpro:IPR003029(S1, RNA binding)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR022967|interpro:IPR035104|refseq:NP_415431.1|refseq:WP_000140327.1|rcsb pdb:2BH8|rcsb pdb:2KHI|rcsb pdb:2KHJ|rcsb pdb:4Q7J|rcsb pdb:4R71|rcsb pdb:5XQ5|rcsb pdb:6BU8|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6ZTJ|mint:P0AG67|dip:DIP-35884N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:lezIhvXXLGSyuaFA2vbsdoH1+JU83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0ADY7	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-548773|uniprotkb:P02414|uniprotkb:Q2M6X8|ensemblbacteria:AAC76338|ensemblbacteria:BAE77978	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl16_ecoli(display_long)|uniprotkb:rplP(gene name)|psi-mi:rplP(display_short)|uniprotkb:Large ribosomal subunit protein uL16(gene name synonym)|uniprotkb:JW3275(locus name)|uniprotkb:b3313(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	rcsb pdb:5GAE|refseq:NP_417772.1|refseq:WP_000941212.1|dip:DIP-35976N|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:5AFI|rcsb pdb:4V6T|rcsb pdb:5AKA|rcsb pdb:5GAD|ensemblbacteria:AAC76338(transcript)|ensemblbacteria:b3313(gene)|ensemblbacteria:BAE77978(gene)|ensemblbacteria:BAE77978(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000049"(tRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR000114(Ribosomal protein L16)|interpro:IPR016180(Ribosomal protein L10e/L16)|interpro:IPR020798|interpro:IPR036920|rcsb pdb:2J28|rcsb pdb:2RDO|rcsb pdb:3BBX|rcsb pdb:3J5L|rcsb pdb:3J7Z|rcsb pdb:3J8G|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4UY8|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:3JCD|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6QDW|rcsb pdb:6QUL|rcsb pdb:6S0K|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VU3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6VYQ|rcsb pdb:6VYR|rcsb pdb:6VYS|rcsb pdb:6VYT|rcsb pdb:6VYU|rcsb pdb:6VYW|rcsb pdb:6VYX|rcsb pdb:6VYY|rcsb pdb:6VYZ|rcsb pdb:6VZ2|rcsb pdb:6VZ3|rcsb pdb:6VZ5|rcsb pdb:6VZ7|rcsb pdb:6VZJ|rcsb pdb:6WD0|rcsb pdb:6WD1|rcsb pdb:6WD2|rcsb pdb:6WD3|rcsb pdb:6WD4|rcsb pdb:6WD5|rcsb pdb:6WD6|rcsb pdb:6WD7|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5MGP|rcsb pdb:5NCO|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4H|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GBZ|rcsb pdb:6GC8|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I0Y|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6OGF|rcsb pdb:6OGG|rcsb pdb:6OGI|rcsb pdb:6OM6|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OSK|rcsb pdb:6OSQ|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:5GAF|rcsb pdb:6Q97|rcsb pdb:6WD8|rcsb pdb:6WD9|rcsb pdb:6WDA|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNW|rcsb pdb:6X6T|rcsb pdb:6X7F|rcsb pdb:6X7K|rcsb pdb:6X9Q|rcsb pdb:6XDQ|rcsb pdb:6XDR|rcsb pdb:6XGF|rcsb pdb:6XII|rcsb pdb:6XIJ|rcsb pdb:6XZ7|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6YSR|rcsb pdb:6YSS|rcsb pdb:6YST|rcsb pdb:6YSU|rcsb pdb:6ZTJ|rcsb pdb:6ZTL|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7BL4|rcsb pdb:7BL5|rcsb pdb:7BL6|rcsb pdb:7BV8|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:YzTBODIdS+3kizWZ9+4Z8JkQNDY83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A7U3	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-544015|uniprotkb:P02375|uniprotkb:Q2M6Y1|ensemblbacteria:AAC76341|ensemblbacteria:BAE77975	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rs19_ecoli(display_long)|uniprotkb:rpsS(gene name)|psi-mi:rpsS(display_short)|uniprotkb:Small ribosomal subunit protein uS19(gene name synonym)|uniprotkb:JW3278(locus name)|uniprotkb:b3316(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417775.1|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)|interpro:IPR002222(Ribosomal protein S19/S15)|interpro:IPR005732(Ribosomal protein S19, bacterial-type)|interpro:IPR020934|interpro:IPR023575|rcsb pdb:1M5G|rcsb pdb:2YKR|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4A2I|rcsb pdb:4ADV|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5AFI|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5ME0|rcsb pdb:5ME1|rcsb pdb:5MGP|rcsb pdb:5MY1|rcsb pdb:5NO2|rcsb pdb:5NO3|rcsb pdb:5NO4|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5UZ4|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6W6K|rcsb pdb:6W77|rcsb pdb:6W7M|rcsb pdb:6W7N|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XE0|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6ZTL|rcsb pdb:7B5K|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|ensemblbacteria:BAE77975(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000049"(tRNA binding)|ensemblbacteria:AAC76341(transcript)|ensemblbacteria:b3316(gene)|ensemblbacteria:BAE77975(gene)|refseq:WP_001138117.1|dip:DIP-47904N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:GsjD8kiBe8MZVE79WrfWhnp+Xcw83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P68679	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-546099|uniprotkb:P02379|uniprotkb:Q2M9E0|uniprotkb:Q8ZI69|ensemblbacteria:AAC76101|ensemblbacteria:BAE77116	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rs21_ecoli(display_long)|uniprotkb:rpsU(gene name)|psi-mi:rpsU(display_short)|uniprotkb:Small ribosomal subunit protein bS21(gene name synonym)|uniprotkb:JW3037(locus name)|uniprotkb:b3065(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417537.1|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6C4I|rcsb pdb:6DNC|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Y69|rcsb pdb:6ZTL|rcsb pdb:7B5K|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|refseq:WP_001144069.1|ensemblbacteria:AAC76101(transcript)|ensemblbacteria:b3065(gene)|ensemblbacteria:BAE77116(gene)|ensemblbacteria:BAE77116(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)|interpro:IPR001911(Ribosomal protein S21)|interpro:IPR018278|interpro:IPR038380|rcsb pdb:2YKR|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4A2I|rcsb pdb:4ADV|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:3JBU|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5AFI|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNV|rcsb pdb:6Q97|rcsb pdb:6WNW|rcsb pdb:6XE0|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5ME0|rcsb pdb:5ME1|rcsb pdb:5MGP|rcsb pdb:5J88|rcsb pdb:5MY1|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|dip:DIP-47839N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:fhuNBqH/nLX/CnVp/Ee32xD7Sz483333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A7R5	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-544602|uniprotkb:P02364|uniprotkb:Q2M6Y6|ensemblbacteria:AAC76346|ensemblbacteria:BAE77970	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rs10_ecoli(display_long)|uniprotkb:rpsJ(gene name)|psi-mi:rpsJ(display_short)|uniprotkb:nusE(gene name synonym)|uniprotkb:b3321(locus name)|uniprotkb:JW3283(locus name)|uniprotkb:Small ribosomal subunit protein uS10(gene name synonym)|uniprotkb:Transcription termination/antitermination protein NusE(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417780.1|ensemblbacteria:AAC76346(transcript)|ensemblbacteria:b3321(gene)|ensemblbacteria:BAE77970(gene)|ensemblbacteria:BAE77970(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0001072"(transcription antitermination factor activity, RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|go:"GO:0015935"(small ribosomal subunit)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0031564"(transcription antitermination)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR001848(Ribosomal protein S10)|interpro:IPR018268|interpro:IPR027486|interpro:IPR036838|rcsb pdb:1M5G|rcsb pdb:2KVQ|rcsb pdb:2YKR|go:"GO:0005829"(cytosol)|rcsb pdb:3D3B|rcsb pdb:3D3C|rcsb pdb:3IMQ|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:3W1Y|rcsb pdb:4A2I|rcsb pdb:4ADV|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|refseq:WP_001181004.1|rcsb pdb:6W6K|rcsb pdb:6W77|rcsb pdb:6W7M|rcsb pdb:6W7N|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XE0|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6ZTL|rcsb pdb:7B5K|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5AFI|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5ME0|rcsb pdb:5ME1|rcsb pdb:5MGP|rcsb pdb:5MS0|rcsb pdb:5MY1|rcsb pdb:5NO2|rcsb pdb:5NO3|rcsb pdb:5NO4|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5UZ4|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I7V|rcsb pdb:6NQB|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6TQN|rcsb pdb:6TQO|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|rcsb pdb:7JSZ|dip:DIP-35797N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:hbRDdDB06JklBUlfmY4c80cobao83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0AG59	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-543971|uniprotkb:P02370|ensemblbacteria:AAC76332|ensemblbacteria:BAE77984|uniprotkb:Q2M6X2	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rs14_ecoli(display_long)|uniprotkb:rpsN(gene name)|psi-mi:rpsN(display_short)|uniprotkb:Small ribosomal subunit protein uS14(gene name synonym)|uniprotkb:JW3269(locus name)|uniprotkb:b3307(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417766.1|ensemblbacteria:AAC76332(transcript)|ensemblbacteria:b3307(gene)|ensemblbacteria:BAE77984(gene)|ensemblbacteria:BAE77984(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|go:"GO:0015935"(small ribosomal subunit)|go:"GO:0019843"(rRNA binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)|interpro:IPR001209(Ribosomal protein S14)|interpro:IPR018271|interpro:IPR023036|rcsb pdb:1M5G|rcsb pdb:2YKR|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4A2I|rcsb pdb:4ADV|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5AFI|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5ME0|rcsb pdb:5ME1|rcsb pdb:5MGP|rcsb pdb:5MY1|rcsb pdb:5NO2|rcsb pdb:5NO3|rcsb pdb:5NO4|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5UZ4|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I7V|rcsb pdb:6NQB|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6W6K|rcsb pdb:6W77|rcsb pdb:6W7M|rcsb pdb:6W7N|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XE0|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6ZTL|rcsb pdb:7B5K|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|refseq:WP_001118930.1|dip:DIP-35805N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:y2cf48cKQBXudXk3ScewAVxOEO083333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A7J3	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-546827|uniprotkb:P02408|uniprotkb:Q2M8S1|ensemblbacteria:AAC76959|ensemblbacteria:BAE77335	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl10_ecoli(display_long)|uniprotkb:rplJ(gene name)|psi-mi:rplJ(display_short)|uniprotkb:50S ribosomal protein L8(gene name synonym)|uniprotkb:Large ribosomal subunit protein uL10(gene name synonym)|uniprotkb:JW3948(locus name)|uniprotkb:b3985(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_418412.1|refseq:WP_001207201.1|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XZ7|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:7BL5|rcsb pdb:7BV8|rcsb pdb:7JSZ|rcsb pdb:7JT2|rcsb pdb:7JT3|ensemblbacteria:AAC76959(transcript)|ensemblbacteria:b3985(gene)|ensemblbacteria:BAE77335(gene)|ensemblbacteria:BAE77335(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0015934"(large ribosomal subunit)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0043022"(ribosome binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|interpro:IPR001790(Ribosomal protein L10)|interpro:IPR002363(Ribosomal protein L10, eubacterial, conserved site)|interpro:IPR022973|interpro:IPR043141|rcsb pdb:3J7Z|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JCJ|rcsb pdb:4UY8|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6V|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:5AFI|rcsb pdb:5GAD|rcsb pdb:5GAE|rcsb pdb:5GAF|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5NCO|rcsb pdb:5NP6|rcsb pdb:5O2R|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6HRM|rcsb pdb:6I0Y|rcsb pdb:6O9K|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|dip:DIP-35816N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:h4WfEKX+/n2ZRMYtCA2Y6Ff2UcI83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P61175	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-542255|uniprotkb:P02423|uniprotkb:Q2M6Y0|ensemblbacteria:AAC76340|ensemblbacteria:BAE77976	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl22_ecoli(display_long)|uniprotkb:rplV(gene name)|psi-mi:rplV(display_short)|uniprotkb:eryB(gene name synonym)|uniprotkb:b3315(locus name)|uniprotkb:JW3277(locus name)|uniprotkb:Large ribosomal subunit protein uL22(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	rcsb pdb:6OUO|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6QDW|rcsb pdb:6QUL|rcsb pdb:6S0K|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6OT3|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XZ7|rcsb pdb:3J5L|rcsb pdb:3J7Z|rcsb pdb:3J8G|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:3BBX|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4UY8|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GBZ|rcsb pdb:6GC0|rcsb pdb:6GC4|rcsb pdb:6GC6|rcsb pdb:6GC7|rcsb pdb:6GC8|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I0Y|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:5UYQ|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V4V|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:5GAE|rcsb pdb:5GAF|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5GAD|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5MGP|rcsb pdb:5NCO|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5LZE|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|ensemblbacteria:AAC76340(transcript)|ensemblbacteria:b3315(gene)|ensemblbacteria:BAE77976(gene)|ensemblbacteria:BAE77976(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0015934"(large ribosomal subunit)|go:"GO:0019843"(rRNA binding)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0042255"(ribosome assembly)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0046677"(response to antibiotic)|interpro:IPR001063(Ribosomal protein L22/L17)|interpro:IPR005727(Ribosomal protein L22, bacterial-type)|interpro:IPR018260|interpro:IPR036394|rcsb pdb:2J28|rcsb pdb:2RDO|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:4V7A|rcsb pdb:5AFI|rcsb pdb:5AKA|refseq:NP_417774.1|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6YS3|rcsb pdb:6YSR|rcsb pdb:6YSS|rcsb pdb:6YST|rcsb pdb:6YSU|rcsb pdb:6ZTJ|rcsb pdb:6ZTL|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7BL2|rcsb pdb:7BL3|rcsb pdb:7BL4|rcsb pdb:6XZA|rcsb pdb:7BL5|rcsb pdb:7BL6|rcsb pdb:7BV8|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|rcsb pdb:7JSS|refseq:WP_000447529.1|dip:DIP-35983N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:xOklnITBM+rT+TyK+RLrCfG1rTc83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0AG44	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-544558|uniprotkb:P02416|uniprotkb:Q2M6V9|ensemblbacteria:AAC76319|ensemblbacteria:BAE77997	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl17_ecoli(display_long)|uniprotkb:rplQ(gene name)|psi-mi:rplQ(display_short)|uniprotkb:Large ribosomal subunit protein bL17(gene name synonym)|uniprotkb:JW3256(locus name)|uniprotkb:b3294(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417753.1|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5MGP|rcsb pdb:5NCO|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GBZ|rcsb pdb:6GC0|rcsb pdb:6GC4|rcsb pdb:6GC6|rcsb pdb:6GC7|rcsb pdb:6GC8|rcsb pdb:6GWT|rcsb pdb:6GXM|ensemblbacteria:AAC76319(transcript)|ensemblbacteria:b3294(gene)|ensemblbacteria:BAE77997(gene)|ensemblbacteria:BAE77997(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0015934"(large ribosomal subunit)|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR000456(Ribosomal protein L17)|rcsb pdb:2J28|rcsb pdb:2RDO|rcsb pdb:3BBX|rcsb pdb:3J5L|rcsb pdb:3J7Z|rcsb pdb:3J8G|rcsb pdb:3J9Y|interpro:IPR036373|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4UY8|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:5AFI|rcsb pdb:5AKA|rcsb pdb:5GAD|rcsb pdb:5GAE|rcsb pdb:5GAF|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|rcsb pdb:7BV8|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I0Y|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6QDW|rcsb pdb:6QUL|rcsb pdb:6S0K|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XZ7|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6YS3|rcsb pdb:6YSR|rcsb pdb:6YSS|rcsb pdb:6YST|rcsb pdb:6YSU|rcsb pdb:6ZTJ|rcsb pdb:6ZTL|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7BL2|rcsb pdb:7BL3|rcsb pdb:7BL4|rcsb pdb:7BL5|rcsb pdb:7BL6|rcsb pdb:6GXN|refseq:WP_001216368.1|dip:DIP-35801N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:T4mk+i5Wg9p1l+pJBLPWBsu1Zd083333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A910	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-371347|uniprotkb:P02934|ensemblbacteria:AAC74043|ensemblbacteria:BAA35715	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:ompa_ecoli(display_long)|uniprotkb:ompA(gene name)|psi-mi:ompA(display_short)|uniprotkb:tolG(gene name synonym)|uniprotkb:tut(gene name synonym)|uniprotkb:con(gene name synonym)|uniprotkb:Outer membrane protein II*(gene name synonym)|uniprotkb:b0957(locus name)|uniprotkb:JW0940(locus name)|uniprotkb:Outer membrane porin A(gene name synonym)|uniprotkb:Outer membrane protein 3A(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:Outer membrane protein d(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:WP_000750416.1|refseq:NP_415477.1|ensemblbacteria:AAC74043(transcript)|ensemblbacteria:b0957(gene)|ensemblbacteria:BAA35715(gene)|ensemblbacteria:BAA35715(transcript)|go:"GO:0000746"(conjugation)|go:"GO:0006811"(ion transport)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0009597"(detection of virus)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019867"(outer membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046930"(pore complex)|interpro:IPR000498(Outer membrane protein, OmpA-like, transmembrane region)|interpro:IPR002368(Outer membrane protein, OmpA)|interpro:IPR006664(Outer membrane protein, bacterial)|interpro:IPR006690(Outer membrane protein, OmpA-like, conserved site)|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR036737|rcsb pdb:1BXW|rcsb pdb:1G90|rcsb pdb:1QJP|rcsb pdb:2GE4|rcsb pdb:2JMM|rcsb pdb:2MQE|rcsb pdb:3JBU|rcsb pdb:5M2Q|rcsb pdb:6ITC|rcsb pdb:6LYR|interpro:IPR006665(Outer membrane protein, OmpA/MotB, C-terminal)|mint:P0A910|dip:DIP-31879N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:CxKbAqrjV2AUC+f7xNFm73aceRs83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0AFG6	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-558621|uniprotkb:P07016|ensemblbacteria:AAC73821|ensemblbacteria:BAA35393	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:odo2_ecoli(display_long)|uniprotkb:Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex(gene name synonym)|uniprotkb:b0727(locus name)|uniprotkb:sucB(gene name)|psi-mi:sucB(display_short)|uniprotkb:JW0716(locus name)|uniprotkb:2-oxoglutarate dehydrogenase complex component E2(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_415255.1|refseq:WP_000099823.1|dip:DIP-35787N|ensemblbacteria:AAC73821(transcript)|ensemblbacteria:b0727(gene)|ensemblbacteria:BAA35393(gene)|ensemblbacteria:BAA35393(transcript)|go:"GO:0004149"(dihydrolipoyllysine-residue succinyltransferase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0031405"(lipoic acid binding)|go:"GO:0033512"(L-lysine catabolic process to acetyl-CoA via saccharopine)|go:"GO:0045252"(oxoglutarate dehydrogenase complex)|interpro:IPR000089(Biotin/lipoyl attachment)|interpro:IPR001078(Catalytic domain of components of various dehydrogenase complexes)|interpro:IPR003016(2-oxo acid dehydrogenase, lipoyl-binding site)|interpro:IPR004167(E3 binding)|interpro:IPR006255(Dihydrolipoamide succinyltransferase)|interpro:IPR011053(Single hybrid motif)|interpro:IPR023213|interpro:IPR036625|rcsb pdb:1BAL|rcsb pdb:1BBL|rcsb pdb:1C4T|rcsb pdb:1E2O|rcsb pdb:1PMR|rcsb pdb:1SCZ|rcsb pdb:1W4H|rcsb pdb:2BTG|rcsb pdb:2BTH|rcsb pdb:2WXC|rcsb pdb:6PBR	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:yP5LncLPg87gxj5eCsEIGKAfbOU83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0AA10	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-543801|ensemblbacteria:AAC76263|ensemblbacteria:BAE77274|uniprotkb:P02410|uniprotkb:Q2M8Y2	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl13_ecoli(display_long)|uniprotkb:rplM(gene name)|psi-mi:rplM(display_short)|uniprotkb:Large ribosomal subunit protein uL13(gene name synonym)|uniprotkb:JW3200(locus name)|uniprotkb:b3231(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	rcsb pdb:2J28|rcsb pdb:2RDO|rcsb pdb:3BBX|rcsb pdb:3IY9|rcsb pdb:3J5L|rcsb pdb:3J7Z|rcsb pdb:3J8G|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|ensemblbacteria:AAC76263(transcript)|ensemblbacteria:b3231(gene)|ensemblbacteria:BAE77274(gene)|ensemblbacteria:BAE77274(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0006412"(translation)|go:"GO:0008270"(zinc ion binding)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|interpro:IPR005822(Ribosomal protein L13)|interpro:IPR005823(Ribosomal protein L13, bacterial-type)|interpro:IPR023563|interpro:IPR036899|rcsb pdb:1ML5|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4UY8|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|refseq:NP_417698.1|refseq:WP_000847559.1|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GBZ|rcsb pdb:6GC0|rcsb pdb:6GC4|rcsb pdb:6GC6|rcsb pdb:6GC7|rcsb pdb:6GC8|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I0Y|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6PC5|rcsb pdb:6PC7|rcsb pdb:6PC8|rcsb pdb:6PCH|rcsb pdb:6PCQ|rcsb pdb:6PCR|rcsb pdb:6PCS|rcsb pdb:6PCT|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6QDW|rcsb pdb:6QUL|rcsb pdb:6S0K|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6PC6|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6WYV|rcsb pdb:6XZ7|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6YS3|rcsb pdb:6YSR|rcsb pdb:6YSS|rcsb pdb:6YST|rcsb pdb:6YSU|rcsb pdb:6ZTJ|rcsb pdb:6ZTL|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7BL2|rcsb pdb:6WDI|rcsb pdb:7BL3|rcsb pdb:7BL4|rcsb pdb:7BL5|rcsb pdb:7BL6|rcsb pdb:7BV8|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|dip:DIP-47837N|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:5AFI|rcsb pdb:5AKA|rcsb pdb:5GAD|rcsb pdb:5GAE|rcsb pdb:5GAF|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5MGP|rcsb pdb:5NCO|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:z77fcwIBr2DCHbFKdrqVqN1bibU83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A698	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-552091|uniprotkb:P07671|uniprotkb:P76788|uniprotkb:Q2M6P6|ensemblbacteria:AAC77028|ensemblbacteria:BAE78060	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:uvra_ecoli(display_long)|uniprotkb:uvrA(gene name)|psi-mi:uvrA(display_short)|uniprotkb:dinE(gene name synonym)|uniprotkb:b4058(locus name)|uniprotkb:Excinuclease ABC subunit A(gene name synonym)|uniprotkb:JW4019(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_418482.1|refseq:WP_000357740.1|dip:DIP-35876N|ensemblbacteria:AAC77028(transcript)|ensemblbacteria:b4058(gene)|ensemblbacteria:BAE78060(gene)|ensemblbacteria:BAE78060(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009314"(response to radiation)|go:"GO:0009380"(excinuclease repair complex)|go:"GO:0009381"(excinuclease ABC activity)|go:"GO:0009432"(SOS response)|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|go:"GO:0042802"(identical protein binding)|interpro:IPR003439(ABC transporter-like)|interpro:IPR004602(Excinuclease ABC, A subunit)|interpro:IPR017871|interpro:IPR027417|interpro:IPR041102|interpro:IPR041552|rcsb pdb:4DFC	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:OKjfkRoH1Hiss54GfWRhLI6MPcg83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P60723	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-545597|uniprotkb:P02388|uniprotkb:Q2M6Y4|ensemblbacteria:AAC76344|ensemblbacteria:BAE77972	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl4_ecoli(display_long)|uniprotkb:b3319(locus name)|uniprotkb:rplD(gene name)|psi-mi:rplD(display_short)|uniprotkb:eryA(gene name synonym)|uniprotkb:JW3281(locus name)|uniprotkb:Large ribosomal subunit protein uL4(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417778.1|refseq:WP_000424395.1|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5MGP|rcsb pdb:5NCO|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GBZ|rcsb pdb:6GC0|rcsb pdb:6GC4|rcsb pdb:6GC6|rcsb pdb:6GC7|rcsb pdb:6GC8|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I0Y|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6PC5|rcsb pdb:6PC6|rcsb pdb:6PC7|rcsb pdb:6PC8|rcsb pdb:6PCH|rcsb pdb:6PCQ|rcsb pdb:6PCR|rcsb pdb:6PCS|rcsb pdb:6PCT|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6QDW|rcsb pdb:6QUL|rcsb pdb:6S0K|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6WYV|rcsb pdb:6XZ7|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6YS3|rcsb pdb:6YSR|rcsb pdb:6YSS|rcsb pdb:6YST|rcsb pdb:6YSU|rcsb pdb:6ZTJ|rcsb pdb:6ZTL|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7BL2|rcsb pdb:7BL3|rcsb pdb:7BL4|rcsb pdb:7BL5|rcsb pdb:7BL6|rcsb pdb:7BV8|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|ensemblbacteria:AAC76344(transcript)|ensemblbacteria:b3319(gene)|ensemblbacteria:BAE77972(gene)|ensemblbacteria:BAE77972(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006412"(translation)|go:"GO:0015934"(large ribosomal subunit)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030371"(translation repressor activity)|go:"GO:0042255"(ribosome assembly)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046677"(response to antibiotic)|go:"GO:0060698"(endoribonuclease inhibitor activity)|go:"GO:0060702"(negative regulation of endoribonuclease activity)|interpro:IPR002136(Ribosomal protein L4/L1e)|interpro:IPR013005(Ribosomal protein L4/L1e, bacterial-type)|interpro:IPR023574|rcsb pdb:2J28|rcsb pdb:2RDO|rcsb pdb:3BBX|rcsb pdb:3J5L|rcsb pdb:3J7Z|rcsb pdb:3J8G|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4UY8|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:5AFI|rcsb pdb:5AKA|rcsb pdb:5GAD|rcsb pdb:5GAE|rcsb pdb:5GAF|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|mint:P60723|dip:DIP-35791N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:WbrrBL3Ukhk6HXXIMUNfobKFMQw83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A7V0	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-543439|uniprotkb:P02351|uniprotkb:Q9R2E5|ensemblbacteria:AAC73280|ensemblbacteria:BAB96744	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rs2_ecoli(display_long)|uniprotkb:rpsB(gene name)|psi-mi:rpsB(display_short)|uniprotkb:Small ribosomal subunit protein uS2(gene name synonym)|uniprotkb:JW0164(locus name)|uniprotkb:b0169(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	ensemblbacteria:AAC73280(transcript)|ensemblbacteria:b0169(gene)|ensemblbacteria:BAB96744(gene)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003735"(structural constituent of ribosome)|ensemblbacteria:BAB96744(transcript)|go:"GO:0006412"(translation)|go:"GO:0008270"(zinc ion binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)|interpro:IPR001865(Ribosomal protein S2)|interpro:IPR005706(Ribosomal protein S2, bacterial-type)|interpro:IPR018130|interpro:IPR023591|rcsb pdb:1M5G|rcsb pdb:2YKR|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4A2I|rcsb pdb:4ADV|rcsb pdb:4ODL|rcsb pdb:4ODM|rcsb pdb:4ODN|rcsb pdb:4ODP|rcsb pdb:4TOI|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5AFI|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5ME0|rcsb pdb:5ME1|rcsb pdb:5MGP|rcsb pdb:5MY1|rcsb pdb:5NO3|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|refseq:NP_414711.1|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5UZ4|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I7V|rcsb pdb:6NQB|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6W7M|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XE0|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6ZTL|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|refseq:WP_000246882.1|dip:DIP-6877N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:+rNceVa94GFWlokB2Om+ih4jRP883333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A7K2	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-543702|ensemblbacteria:AAC76960|ensemblbacteria:BAE77334|uniprotkb:P02392|uniprotkb:Q2M8S2	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl7_ecoli(display_long)|uniprotkb:rplL(gene name)|psi-mi:rplL(display_short)|uniprotkb:L8(gene name synonym)|uniprotkb:Large ribosomal subunit protein bL12(gene name synonym)|uniprotkb:JW3949(locus name)|uniprotkb:b3986(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	interpro:IPR014719(Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like)|interpro:IPR036235|rcsb pdb:1CTF|rcsb pdb:1RQS|rcsb pdb:1RQT|rcsb pdb:1RQU|rcsb pdb:1RQV|rcsb pdb:2BCW|rcsb pdb:3J7Z|rcsb pdb:4UY8|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V5M|rcsb pdb:4V5N|rcsb pdb:4V7B|rcsb pdb:4V7D|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9O|rcsb pdb:5KCS|rcsb pdb:6I0Y|ensemblbacteria:AAC76960(transcript)|ensemblbacteria:b3986(gene)|ensemblbacteria:BAE77334(gene)|ensemblbacteria:BAE77334(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0015934"(large ribosomal subunit)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043022"(ribosome binding)|interpro:IPR000206(Ribosomal protein L7/L12)|interpro:IPR008932(Ribosomal protein L7/L12, oligomerisation)|interpro:IPR013823(Ribosomal protein L7/L12, C-terminal)|refseq:NP_418413.1|refseq:WP_000028878.1|dip:DIP-36009N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:fEzQn7LbikWPzhGMEK/zsTIN2o883333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0AG30	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-545468|uniprotkb:P03002|uniprotkb:Q2M891|uniprotkb:Q48357|ensemblbacteria:AAC76788|ensemblbacteria:BAE77515	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rho_ecoli(display_long)|uniprotkb:rho(gene name)|psi-mi:rho(display_short)|uniprotkb:nitA(gene name synonym)|uniprotkb:psuA(gene name synonym)|uniprotkb:rnsC(gene name synonym)|uniprotkb:sbaA(gene name synonym)|uniprotkb:tsu(gene name synonym)|uniprotkb:b3783(locus name)|uniprotkb:ATP-dependent helicase Rho(gene name synonym)|uniprotkb:JW3756(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_418230.1|refseq:WP_001054527.1|ensemblbacteria:AAC76788(transcript)|ensemblbacteria:b3783(gene)|ensemblbacteria:BAE77515(gene)|ensemblbacteria:BAE77515(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0016020"(membrane)|go:"GO:0016787"(hydrolase activity)|go:"GO:0042802"(identical protein binding)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004665(Transcription termination factor Rho)|interpro:IPR011112(Rho termination factor, N-terminal)|interpro:IPR011113(Rho termination factor, RNA-binding)|interpro:IPR011129(Cold shock protein)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR027417|interpro:IPR036269|interpro:IPR041703|rcsb pdb:1A62|rcsb pdb:1A63|rcsb pdb:1A8V|rcsb pdb:1PV4|rcsb pdb:1PVO|rcsb pdb:1XPO|rcsb pdb:1XPR|rcsb pdb:1XPU|rcsb pdb:2A8V|rcsb pdb:2HT1|rcsb pdb:3ICE|rcsb pdb:5JJI|rcsb pdb:5JJK|rcsb pdb:5JJL|rcsb pdb:6DUQ|rcsb pdb:6WA8|rcsb pdb:6XAS|rcsb pdb:6XAV|mint:P0AG30|dip:DIP-35363N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:sT9eClXyp1/idgeBsqw6ZP8J1FM83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0C8J8	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-550954|uniprotkb:P76414|intact:EBI-9148602|uniprotkb:P37191|ensemblbacteria:AAC75156|ensemblbacteria:BAA15965	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:gatz_ecoli(display_long)|uniprotkb:gatZ(gene name)|psi-mi:gatZ(display_short)|uniprotkb:b2095(locus name)|uniprotkb:JW2082(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_416598.1|refseq:WP_000853883.1|dip:DIP-48243N|ensemblbacteria:AAC75156(transcript)|ensemblbacteria:b2095(gene)|ensemblbacteria:BAA15965(gene)|ensemblbacteria:BAA15965(transcript)|go:"GO:0003824"(catalytic activity)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0009401"(phosphoenolpyruvate-dependent sugar phosphotransferase system)|go:"GO:0019404"(galactitol catabolic process)|go:"GO:2001059"(D-tagatose 6-phosphate catabolic process)|interpro:IPR012062(D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit AgaZ)|interpro:IPR013785(Aldolase-type TIM barrel)|interpro:IPR023436	go:"GO:0005737"(cytoplasm)	-	caution:This sequence has been withdrawn from Uniprot.|crc64:258D25D832E42580	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:8ZWBXZiqVKLX9dXLlk7eYwqKgNk83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A7V3	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-544851|uniprotkb:P02352|uniprotkb:Q2M6X9|ensemblbacteria:AAC76339|ensemblbacteria:BAE77977	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rs3_ecoli(display_long)|uniprotkb:rpsC(gene name)|psi-mi:rpsC(display_short)|uniprotkb:Small ribosomal subunit protein uS3(gene name synonym)|uniprotkb:JW3276(locus name)|uniprotkb:b3314(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417773.1|ensemblbacteria:AAC76339(transcript)|ensemblbacteria:b3314(gene)|ensemblbacteria:BAE77977(gene)|ensemblbacteria:BAE77977(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)|interpro:IPR001351(Ribosomal protein S3, C-terminal)|interpro:IPR004044(K Homology, type 2)|interpro:IPR004087(K Homology)|interpro:IPR005704(Ribosomal protein S3, bacterial)|interpro:IPR009019(K Homology, prokaryotic type)|interpro:IPR015946(K homology-like, alpha/beta)|interpro:IPR018280|interpro:IPR036419|rcsb pdb:1M5G|rcsb pdb:2YKR|refseq:WP_000529945.1|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4A2I|rcsb pdb:4ADV|rcsb pdb:4ODQ|rcsb pdb:4U1U|rcsb pdb:4V5H|rcsb pdb:4U1V|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4U20|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4U24|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4U25|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4U26|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4U27|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V47|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5AFI|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:4V48|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I7V|rcsb pdb:6NQB|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6W6K|rcsb pdb:6W77|rcsb pdb:6W7M|rcsb pdb:6W7N|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XE0|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6H4N|rcsb pdb:6ZTL|rcsb pdb:7B5K|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|rcsb pdb:6Y69|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5ME0|rcsb pdb:5ME1|rcsb pdb:5MGP|rcsb pdb:5MY1|rcsb pdb:5NO4|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U4J|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5UZ4|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|mint:P0A7V3|dip:DIP-35807N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:qpeqIQuClTo6Ay10uD3uflaVjcs83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0AC41	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-371263|uniprotkb:P10444|uniprotkb:P78282|ensemblbacteria:AAC73817|ensemblbacteria:BAA35390	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:sdha_ecoli(display_long)|uniprotkb:sdhA(gene name)|psi-mi:sdhA(display_short)|uniprotkb:b0723(locus name)|uniprotkb:JW0713(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:WP_000775540.1|refseq:NP_415251.1|ensemblbacteria:AAC73817(transcript)|ensemblbacteria:b0723(gene)|ensemblbacteria:BAA35390(gene)|ensemblbacteria:BAA35390(transcript)|go:"GO:0000104"(succinate dehydrogenase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0008177"("succinate dehydrogenase (ubiquinone) activity")|go:"GO:0009055"(electron transfer activity)|go:"GO:0009060"(aerobic respiration)|go:"GO:0009061"(anaerobic respiration)|go:"GO:0045282"(plasma membrane succinate dehydrogenase complex)|go:"GO:0050660"(flavin adenine dinucleotide binding)|interpro:IPR003952(Fumarate reductase/succinate dehydrogenase, FAD-binding site)|interpro:IPR003953(Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal)|interpro:IPR011281(Succinate dehydrogenase, flavoprotein subunit)|interpro:IPR014006(Succinate dehydrogenase or fumarate reductase, flavoprotein subunit)|interpro:IPR015939(Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal)|interpro:IPR027477|interpro:IPR036188|interpro:IPR037099|rcsb pdb:1NEK|rcsb pdb:1NEN|rcsb pdb:2ACZ|rcsb pdb:2AD0|rcsb pdb:2WDQ|rcsb pdb:2WDR|rcsb pdb:2WDV|rcsb pdb:2WP9|rcsb pdb:2WS3|rcsb pdb:2WU2|rcsb pdb:2WU5|rcsb pdb:7JZ2|mint:P0AC41|dip:DIP-31877N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:azW24uHg/gcOkCSv0XNuI1NhadY83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A7X3	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-546072|uniprotkb:P02363|uniprotkb:Q2M8Y3|ensemblbacteria:AAC76262|ensemblbacteria:BAE77273	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rs9_ecoli(display_long)|uniprotkb:rpsI(gene name)|psi-mi:rpsI(display_short)|uniprotkb:Small ribosomal subunit protein uS9(gene name synonym)|uniprotkb:JW3199(locus name)|uniprotkb:b3230(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417697.1|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|interpro:IPR023035|rcsb pdb:1M5G|rcsb pdb:2YKR|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4A2I|rcsb pdb:4ADV|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V66|ensemblbacteria:AAC76262(transcript)|ensemblbacteria:b3230(gene)|ensemblbacteria:BAE77273(gene)|ensemblbacteria:BAE77273(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0015935"(small ribosomal subunit)|go:"GO:0022627"(cytosolic small ribosomal subunit)|interpro:IPR000754(Ribosomal protein S9)|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR020568|interpro:IPR020574|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V74|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5AFI|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|refseq:WP_000829818.1|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5ME0|rcsb pdb:5ME1|rcsb pdb:5MGP|rcsb pdb:5MY1|rcsb pdb:5NO2|rcsb pdb:5NO3|rcsb pdb:5NO4|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6W6K|rcsb pdb:6W77|rcsb pdb:6W7M|rcsb pdb:6W7N|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XE0|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6ZTL|rcsb pdb:7B5K|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|dip:DIP-35799N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:eR/WXFtBzEhghnTbDCiVFo8dnU883333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A9X4	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-371008|uniprotkb:P13519|uniprotkb:P76678|uniprotkb:Q2M8W3|ensemblbacteria:AAC76283|ensemblbacteria:BAE77293	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:mreb_ecoli(display_long)|uniprotkb:mreB(gene name)|psi-mi:mreB(display_short)|uniprotkb:envB(gene name synonym)|uniprotkb:rodY(gene name synonym)|uniprotkb:b3251(locus name)|uniprotkb:JW3220(locus name)|uniprotkb:Actin-like MreB protein(gene name synonym)|uniprotkb:Rod shape-determining protein MreB(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417717.2|refseq:WP_000913396.1|ensemblbacteria:AAC76283(transcript)|ensemblbacteria:b3251(gene)|ensemblbacteria:BAE77293(gene)|ensemblbacteria:BAE77293(transcript)|go:"GO:0000902"(cell morphogenesis)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0031226"(intrinsic component of plasma membrane)|go:"GO:0051782"(negative regulation of cell division)|go:"GO:0051983"(regulation of chromosome segregation)|go:"GO:0099513"(polymeric cytoskeletal fiber)|interpro:IPR004753(Cell shape determining protein MreB/Mrl)|interpro:IPR043129|go:"GO:0043093"(FtsZ-dependent cytokinesis)|go:"GO:0042802"(identical protein binding)|mint:P0A9X4|dip:DIP-31874N	go:"GO:0005737"(cytoplasm)	-	crc64:1393696D8CDAEF93	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:JUXJrtkaV0FqFAg4vDeiie+mkOo83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A7L0	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-543771|uniprotkb:P02384|uniprotkb:Q2M8S0|ensemblbacteria:AAC76958|ensemblbacteria:BAE77336	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl1_ecoli(display_long)|uniprotkb:rplA(gene name)|psi-mi:rplA(display_short)|uniprotkb:Large ribosomal subunit protein uL1(gene name synonym)|uniprotkb:JW3947(locus name)|uniprotkb:b3984(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_418411.1|refseq:WP_001096684.1|ensemblbacteria:AAC76958(transcript)|ensemblbacteria:b3984(gene)|ensemblbacteria:BAE77336(gene)|ensemblbacteria:BAE77336(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000049"(tRNA binding)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0045947"(negative regulation of translational initiation)|interpro:IPR002143(Ribosomal protein L1)|interpro:IPR005878(Ribosomal protein L1, bacterial-type)|interpro:IPR016095(Ribosomal protein L1, 3-layer alpha/beta-sandwich)|interpro:IPR023673|interpro:IPR023674|rcsb pdb:4V5H|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6K|interpro:IPR028364|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:1ML5|rcsb pdb:2RDO|rcsb pdb:3J46|rcsb pdb:3J5S|rcsb pdb:3J8G|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:487D|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:1EG0|rcsb pdb:4V4V|rcsb pdb:4V4W|dip:DIP-35746N|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4WOI|rcsb pdb:5ADY|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:6BU8|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:7JSZ	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:SDyoEYtquixLGCdVegAmQdyeFG883333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P02359	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-543074|ensemblbacteria:BAE77950|uniprotkb:Q2M706|ensemblbacteria:AAC76366	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rs7_ecoli(display_long)|uniprotkb:rpsG(gene name)|psi-mi:rpsG(display_short)|uniprotkb:Small ribosomal subunit protein uS7(gene name synonym)|uniprotkb:JW3303(locus name)|uniprotkb:b3341(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	ensemblbacteria:BAE77950(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000049"(tRNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0006412"(translation)|go:"GO:0016020"(membrane)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)|interpro:IPR000235(Ribosomal protein S7)|interpro:IPR005717(Ribosomal protein S7, bacterial-type)|interpro:IPR020606|interpro:IPR023798|interpro:IPR036823|ensemblbacteria:AAC76366(transcript)|ensemblbacteria:b3341(gene)|ensemblbacteria:BAE77950(gene)|rcsb pdb:1M5G|rcsb pdb:1ML5|rcsb pdb:2YKR|rcsb pdb:3J5S|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4A2I|rcsb pdb:4ADV|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5AFI|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5ME0|rcsb pdb:5ME1|rcsb pdb:5MGP|rcsb pdb:5MY1|rcsb pdb:5NO2|rcsb pdb:5NO3|rcsb pdb:5NO4|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5UZ4|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|refseq:NP_417800.1|refseq:WP_001138045.1|rcsb pdb:1EG0|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6W7M|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XE0|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6ZTJ|rcsb pdb:6ZTL|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|rcsb pdb:6OUO|dip:DIP-10783N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:r5wLLoX3XcQcaPbQESsYwbsFxc483333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P62399	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-545956|uniprotkb:P02389|uniprotkb:Q2M6X3|ensemblbacteria:AAC76333|ensemblbacteria:BAE77983	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl5_ecoli(display_long)|uniprotkb:rplE(gene name)|psi-mi:rplE(display_short)|uniprotkb:Large ribosomal subunit protein uL5(gene name synonym)|uniprotkb:JW3270(locus name)|uniprotkb:b3308(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	ensemblbacteria:AAC76333(transcript)|ensemblbacteria:b3308(gene)|ensemblbacteria:BAE77983(gene)|refseq:NP_417767.1|ensemblbacteria:BAE77983(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000049"(tRNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:5AFI|rcsb pdb:5AKA|rcsb pdb:5GAD|rcsb pdb:5GAE|rcsb pdb:4V7C|rcsb pdb:5GAF|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GBZ|rcsb pdb:6GC0|rcsb pdb:6GC4|rcsb pdb:6GC8|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I0Y|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6QDW|rcsb pdb:6QUL|rcsb pdb:6S0K|rcsb pdb:5NCO|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5JTE|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5MGP|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XZ7|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6YS3|rcsb pdb:6YSR|rcsb pdb:6YSS|rcsb pdb:6YST|rcsb pdb:6YSU|rcsb pdb:6ZTJ|rcsb pdb:6ZTL|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7BL2|rcsb pdb:7BL3|rcsb pdb:7BL4|rcsb pdb:7BL5|rcsb pdb:7BL6|rcsb pdb:7BV8|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:6WDC|go:"GO:0006412"(translation)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR002132(Ribosomal protein L5)|interpro:IPR020929|interpro:IPR020930|interpro:IPR022803|interpro:IPR031309|interpro:IPR031310|rcsb pdb:1ML5|rcsb pdb:2J28|rcsb pdb:2RDO|rcsb pdb:3BBX|rcsb pdb:3J5L|rcsb pdb:3J5S|rcsb pdb:3J7Z|rcsb pdb:3J8G|rcsb pdb:3J9Y|go:"GO:0005829"(cytosol)|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|rcsb pdb:7JSZ|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4UY8|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:3J9Z|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V6D|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|refseq:WP_001096200.1|dip:DIP-35914N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:aJDm9ZIs4cMcxTad9fwTMM67xU883333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A7R9	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-548800|uniprotkb:P02366|uniprotkb:Q2M6W2|ensemblbacteria:AAC76322|ensemblbacteria:BAE77994	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rs11_ecoli(display_long)|uniprotkb:rpsK(gene name)|psi-mi:rpsK(display_short)|uniprotkb:Small ribosomal subunit protein uS11(gene name synonym)|uniprotkb:JW3259(locus name)|uniprotkb:b3297(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417756.1|refseq:WP_001029684.1|dip:DIP-47838N|rcsb pdb:6Y69|rcsb pdb:6ZTL|rcsb pdb:7B5K|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|rcsb pdb:6XZB|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5AFI|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:4V66|ensemblbacteria:AAC76322(transcript)|ensemblbacteria:b3297(gene)|ensemblbacteria:BAE77994(gene)|ensemblbacteria:BAE77994(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0048027"(mRNA 5'-UTR binding)|go:"GO:0070181"(small ribosomal subunit rRNA binding)|interpro:IPR001971(Ribosomal protein S11)|interpro:IPR018102|interpro:IPR019981|interpro:IPR036967|rcsb pdb:1M5G|rcsb pdb:2YKR|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4A2I|rcsb pdb:4ADV|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5ME0|rcsb pdb:5ME1|rcsb pdb:5MGP|rcsb pdb:5MY1|rcsb pdb:5NO2|rcsb pdb:5NO3|rcsb pdb:5NO4|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I7V|rcsb pdb:6O7K|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OSK|rcsb pdb:6OSQ|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:5IT8|rcsb pdb:6OUO|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VU3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6VZ3|rcsb pdb:6VZ5|rcsb pdb:6VZ7|rcsb pdb:6VZJ|rcsb pdb:6W6K|rcsb pdb:6W77|rcsb pdb:6W7M|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XE0|rcsb pdb:6XZA	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:8tlfp8p62+nKKYjgksTkOJl/G/s83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0ADY3	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-545605|uniprotkb:P02411|uniprotkb:Q2M6X5|ensemblbacteria:AAC76335|ensemblbacteria:BAE77981	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl14_ecoli(display_long)|uniprotkb:rplN(gene name)|psi-mi:rplN(display_short)|uniprotkb:Large ribosomal subunit protein uL14(gene name synonym)|uniprotkb:JW3272(locus name)|uniprotkb:b3310(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417769.1|refseq:WP_000613955.1|ensemblbacteria:AAC76335(transcript)|ensemblbacteria:b3310(gene)|ensemblbacteria:BAE77981(gene)|ensemblbacteria:BAE77981(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|interpro:IPR000218(Ribosomal protein L14b/L23e)|interpro:IPR005745(Ribosomal protein L14, bacterial-type)|interpro:IPR019972|interpro:IPR036853|rcsb pdb:1ML5|rcsb pdb:2J28|rcsb pdb:2RDO|rcsb pdb:3BBX|rcsb pdb:3IY9|rcsb pdb:3IZZ|rcsb pdb:3J5L|rcsb pdb:3J7Z|rcsb pdb:3J8G|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:487D|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4UY8|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:7JT3|rcsb pdb:7JT2|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5MGP|rcsb pdb:5NCO|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GBZ|rcsb pdb:6GC0|rcsb pdb:6GC4|rcsb pdb:6GC6|rcsb pdb:6GC7|rcsb pdb:6GC8|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6I0Y|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6QDW|rcsb pdb:6QUL|rcsb pdb:6S0K|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XZ7|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6YS3|rcsb pdb:6YSR|rcsb pdb:6YSS|rcsb pdb:6YST|rcsb pdb:6HRM|rcsb pdb:6YSU|rcsb pdb:6ZTJ|rcsb pdb:6ZTL|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7BL2|rcsb pdb:7BL3|rcsb pdb:7BL4|rcsb pdb:7BL5|rcsb pdb:7BL6|rcsb pdb:7BV8|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:5AFI|rcsb pdb:5AKA|rcsb pdb:5GAD|rcsb pdb:5GAE|rcsb pdb:5GAF|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|dip:DIP-35798N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:PrAzPEr6gtt0rUVouYoMcQ4LZtw83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A6J5	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-1113690|uniprotkb:P29011|ensemblbacteria:AAC74273|ensemblbacteria:BAA36044	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:dada_ecoli(display_long)|uniprotkb:dadA(gene name)|psi-mi:dadA(display_short)|uniprotkb:dadR(gene name synonym)|uniprotkb:b1189(locus name)|uniprotkb:JW1178(locus name)|uniprotkb:D-alanine dehydrogenase(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_415707.1|refseq:WP_001266908.1|ensemblbacteria:AAC74273(transcript)|ensemblbacteria:b1189(gene)|ensemblbacteria:BAA36044(gene)|ensemblbacteria:BAA36044(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0008718"(D-amino-acid dehydrogenase activity)|go:"GO:0016491"(oxidoreductase activity)|go:"GO:0019480"(L-alanine oxidation to pyruvate via D-alanine)|go:"GO:0055130"(D-alanine catabolic process)|interpro:IPR006076(FAD dependent oxidoreductase)|interpro:IPR023080|interpro:IPR036188|dip:DIP-6852N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:yCoYN/jMP7RN17G3KeckQQkh1dg83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A7W1	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-543949|ensemblbacteria:AAC76328|ensemblbacteria:BAE77988|uniprotkb:O54299|uniprotkb:P02356|uniprotkb:Q2M6W8	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rs5_ecoli(display_long)|uniprotkb:rpsE(gene name)|psi-mi:rpsE(display_short)|uniprotkb:spc(gene name synonym)|uniprotkb:b3303(locus name)|uniprotkb:JW3265(locus name)|uniprotkb:Small ribosomal subunit protein uS5(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417762.1|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0046677"(response to antibiotic)|go:"GO:1990145"(maintenance of translational fidelity)|interpro:IPR000851(Ribosomal protein S5)|interpro:IPR005324(Ribosomal protein S5, C-terminal)|interpro:IPR005712(Ribosomal protein S5, bacterial-type)|interpro:IPR013810(Ribosomal protein S5, N-terminal)|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR018192|interpro:IPR020568|rcsb pdb:1EG0|rcsb pdb:1M5G|rcsb pdb:2YKR|rcsb pdb:3J9Y|ensemblbacteria:AAC76328(transcript)|ensemblbacteria:b3303(gene)|ensemblbacteria:BAE77988(gene)|ensemblbacteria:BAE77988(transcript)|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3J9Z|refseq:WP_000940121.1|rcsb pdb:6ZTL|rcsb pdb:7B5K|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4A2I|rcsb pdb:4ADV|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5AFI|mint:P0A7W1|dip:DIP-10781N|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5ME0|rcsb pdb:5ME1|rcsb pdb:5MGP|rcsb pdb:5MY1|rcsb pdb:5NO2|rcsb pdb:5NO3|rcsb pdb:5NO4|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U4J|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5UZ4|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6DNC|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I7V|rcsb pdb:6NQB|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6W6K|rcsb pdb:6W77|rcsb pdb:6W7M|rcsb pdb:6W7N|rcsb pdb:6W7W|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XE0|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:Zk9R5pUCj4G0SUd9gk6QJU6BjNw83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0ACP1	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-550498|uniprotkb:P21168|ensemblbacteria:AAC73191|ensemblbacteria:BAB96648	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:cra_ecoli(display_long)|uniprotkb:cra(gene name)|psi-mi:cra(display_short)|uniprotkb:Fructose repressor(gene name synonym)|uniprotkb:fruC(gene name synonym)|uniprotkb:fruR(gene name synonym)|uniprotkb:shl(gene name synonym)|uniprotkb:JW0078(locus name)|uniprotkb:b0080(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_414622.1|refseq:WP_000762401.1|dip:DIP-35838N|ensemblbacteria:AAC73191(transcript)|ensemblbacteria:b0080(gene)|ensemblbacteria:BAB96648(gene)|ensemblbacteria:BAB96648(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000986"|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0009750"(response to fructose)|go:"GO:0042802"(identical protein binding)|go:"GO:2000142"(regulation of DNA-templated transcription, initiation)|interpro:IPR000843(Bacterial regulatory protein, LacI)|interpro:IPR001761(Periplasmic binding protein/LacI transcriptional regulator)|interpro:IPR010982(Lambda repressor-like, DNA-binding)|interpro:IPR012781(D-fructose-responsive transcription factor)|interpro:IPR028082|rcsb pdb:1UXC|rcsb pdb:1UXD|rcsb pdb:2IKS	go:"GO:0005737"(cytoplasm)	-	caution:This sequence has been withdrawn from Uniprot.|crc64:503AE935CC2EC0C8	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:Q1TXpzBpPqcHJDHH2/F5cndX54k83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P60438	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-542200|uniprotkb:P02386|uniprotkb:Q2M6Y5|ensemblbacteria:BAE77971|ensemblbacteria:AAC76345	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl3_ecoli(display_long)|uniprotkb:rplC(gene name)|psi-mi:rplC(display_short)|uniprotkb:Large ribosomal subunit protein uL3(gene name synonym)|uniprotkb:JW3282(locus name)|uniprotkb:b3320(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:NP_417779.1|ensemblbacteria:AAC76345(transcript)|ensemblbacteria:b3320(gene)|ensemblbacteria:BAE77971(gene)|ensemblbacteria:BAE77971(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR000597(Ribosomal protein L3)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR019926|interpro:IPR019927|rcsb pdb:1ML5|rcsb pdb:2J28|rcsb pdb:2RDO|rcsb pdb:3BBX|rcsb pdb:3J5L|rcsb pdb:3J7Z|rcsb pdb:3J8G|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:3JCN|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4UY8|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:5AFI|rcsb pdb:5AKA|rcsb pdb:5GAD|rcsb pdb:5GAE|rcsb pdb:5GAF|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5MGP|rcsb pdb:5NCO|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4H|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6GC4|rcsb pdb:6GC6|rcsb pdb:6GC7|rcsb pdb:6GC8|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I0Y|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6OGF|rcsb pdb:6OGG|rcsb pdb:6OGI|rcsb pdb:6OM6|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OSK|rcsb pdb:6OSQ|rcsb pdb:6ENJ|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6PC5|rcsb pdb:6PC6|rcsb pdb:6PC7|rcsb pdb:6PC8|rcsb pdb:6PCH|rcsb pdb:6PCQ|rcsb pdb:6PCR|rcsb pdb:6PCS|rcsb pdb:6PCT|rcsb pdb:6PJ6|rcsb pdb:6ENU|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6QDW|rcsb pdb:6QUL|rcsb pdb:6S0K|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VU3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6VYQ|rcsb pdb:6VYR|rcsb pdb:6VYS|rcsb pdb:6VYT|rcsb pdb:6VYU|rcsb pdb:6VYW|rcsb pdb:6VYX|rcsb pdb:6VYY|rcsb pdb:6VYZ|rcsb pdb:6VZ2|rcsb pdb:6VZ3|rcsb pdb:6VZ5|rcsb pdb:6VZ7|rcsb pdb:6VZJ|rcsb pdb:6WD0|rcsb pdb:6WD1|rcsb pdb:6WD2|rcsb pdb:6WD3|rcsb pdb:6WD4|rcsb pdb:6WD5|rcsb pdb:6WD6|rcsb pdb:6WD7|rcsb pdb:6WD8|rcsb pdb:6WD9|rcsb pdb:6GBZ|rcsb pdb:6WDA|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6GC0|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XGF|rcsb pdb:6WYV|rcsb pdb:6XII|rcsb pdb:6XIJ|rcsb pdb:6XZ7|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6YS3|rcsb pdb:6YSR|rcsb pdb:6YSS|rcsb pdb:6YST|rcsb pdb:6YSU|rcsb pdb:6ZTJ|rcsb pdb:6X6T|rcsb pdb:6ZTL|rcsb pdb:6X7F|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7BL2|rcsb pdb:7BL3|rcsb pdb:7BL4|rcsb pdb:7BL5|rcsb pdb:6X7K|rcsb pdb:6X9Q|rcsb pdb:6XDQ|rcsb pdb:6XDR|rcsb pdb:7BL6|rcsb pdb:7BV8|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|refseq:WP_000579833.1|dip:DIP-10744N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:OUnepC9ctxr+wgSyKIs3242XtNk83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0AG55	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-546389|uniprotkb:P02390|uniprotkb:Q2M6X0|ensemblbacteria:AAC76330|ensemblbacteria:BAE77986	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl6_ecoli(display_long)|uniprotkb:rplF(gene name)|psi-mi:rplF(display_short)|uniprotkb:Large ribosomal subunit protein uL6(gene name synonym)|uniprotkb:JW3267(locus name)|uniprotkb:b3305(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	rcsb pdb:3JCN|rcsb pdb:487D|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4UY8|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:3JCJ|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7C|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:5AFI|rcsb pdb:5AKA|rcsb pdb:5GAD|rcsb pdb:5GAE|rcsb pdb:5GAF|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:6GC0|rcsb pdb:6GC4|rcsb pdb:6GC6|rcsb pdb:6GC8|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I0Y|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6QDW|rcsb pdb:6QUL|rcsb pdb:6S0K|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XZ7|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6YS3|rcsb pdb:6YSR|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:6YSS|rcsb pdb:6YST|rcsb pdb:6YSU|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:6ZTJ|rcsb pdb:6ZTL|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7BL2|rcsb pdb:7BL3|rcsb pdb:7BL4|rcsb pdb:7BL5|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:7BL6|rcsb pdb:7BV8|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GBZ|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5MGP|rcsb pdb:5NCO|rcsb pdb:5NP6|rcsb pdb:5KCS|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|refseq:NP_417764.1|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0046677"(response to antibiotic)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|interpro:IPR000702(Ribosomal protein L6)|interpro:IPR002358(Ribosomal protein L6, conserved site-1)|interpro:IPR019906|interpro:IPR020040|interpro:IPR036789|rcsb pdb:1EG0|rcsb pdb:1ML5|rcsb pdb:2J28|rcsb pdb:2RDO|rcsb pdb:3BBX|rcsb pdb:3J5L|rcsb pdb:3J7Z|rcsb pdb:3J8G|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|go:"GO:0002181"(cytoplasmic translation)|rcsb pdb:3JCD|rcsb pdb:3JCE|refseq:WP_000091945.1|ensemblbacteria:AAC76330(transcript)|ensemblbacteria:b3305(gene)|ensemblbacteria:BAE77986(gene)|ensemblbacteria:BAE77986(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|dip:DIP-35860N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:CaafCVjDObotW2gT2NDzHa7ptgU83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P60422	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-543515|uniprotkb:P02387|uniprotkb:Q2M6Y2|ensemblbacteria:AAC76342|ensemblbacteria:BAE77974	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rl2_ecoli(display_long)|uniprotkb:rplB(gene name)|psi-mi:rplB(display_short)|uniprotkb:Large ribosomal subunit protein uL2(gene name synonym)|uniprotkb:JW3279(locus name)|uniprotkb:b3317(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463360|imex:IM-12086-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:487D|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4UY8|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|ensemblbacteria:AAC76342(transcript)|ensemblbacteria:b3317(gene)|ensemblbacteria:BAE77974(gene)|ensemblbacteria:BAE77974(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4H|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GBZ|rcsb pdb:6GC0|rcsb pdb:6GC4|rcsb pdb:6GC6|rcsb pdb:6GC8|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I0Y|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6OGF|rcsb pdb:5AKA|rcsb pdb:5GAD|rcsb pdb:5GAE|rcsb pdb:5GAF|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5MGP|rcsb pdb:5NCO|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016740"(transferase activity)|go:"GO:0019843"(rRNA binding)|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR002171(Ribosomal protein L2)|interpro:IPR005880(Ribosomal protein L2, bacterial-type)|interpro:IPR008991(Translation protein SH3-like)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR014722(Translation protein SH3-like, subgroup)|interpro:IPR014726(Ribosomal protein L2, domain 3)|interpro:IPR022666|interpro:IPR022669|interpro:IPR022671|rcsb pdb:2J28|rcsb pdb:2RDO|rcsb pdb:3BBX|rcsb pdb:3J5L|rcsb pdb:3J7Z|rcsb pdb:3J8G|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:5AFI|rcsb pdb:6QDW|rcsb pdb:6QUL|rcsb pdb:6S0K|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VU3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6VYQ|rcsb pdb:6VYR|rcsb pdb:6VYS|rcsb pdb:6VYT|rcsb pdb:6VYU|rcsb pdb:6VYW|rcsb pdb:6VYX|rcsb pdb:6VYY|rcsb pdb:6VYZ|rcsb pdb:6VZ2|rcsb pdb:6VZ3|rcsb pdb:6VZ5|rcsb pdb:6VZ7|rcsb pdb:6VZJ|rcsb pdb:6WD0|rcsb pdb:6WD1|rcsb pdb:6WD2|rcsb pdb:6WD3|rcsb pdb:6WD4|rcsb pdb:6WD5|rcsb pdb:6WD6|rcsb pdb:6WD7|rcsb pdb:6WD8|rcsb pdb:6WD9|rcsb pdb:6WDA|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6WYV|rcsb pdb:6X6T|rcsb pdb:6X7F|rcsb pdb:6OGG|rcsb pdb:6OGI|rcsb pdb:6OM6|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6PC5|rcsb pdb:6PC6|rcsb pdb:6PC7|rcsb pdb:6PC8|rcsb pdb:6PCH|rcsb pdb:6PCQ|rcsb pdb:6PCR|rcsb pdb:6PCS|rcsb pdb:6PCT|rcsb pdb:6Q98|rcsb pdb:6Q9A|refseq:NP_417776.1|rcsb pdb:6X7K|rcsb pdb:6X9Q|rcsb pdb:6XDQ|rcsb pdb:6XDR|rcsb pdb:6XGF|rcsb pdb:6XII|rcsb pdb:6XIJ|rcsb pdb:6XZ7|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6YS3|rcsb pdb:6YSR|rcsb pdb:6YSS|rcsb pdb:6YST|rcsb pdb:6YSU|rcsb pdb:6ZTJ|rcsb pdb:6ZTL|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7BL2|rcsb pdb:7BL3|rcsb pdb:7BL4|rcsb pdb:7BL5|rcsb pdb:7BL6|rcsb pdb:7BV8|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|rcsb pdb:7K00|refseq:WP_000301864.1|dip:DIP-35747N	go:"GO:0005737"(cytoplasm)	-	-	comment:AfsC protein was identified but has not been shown to exist in in strain MC4100 - it is a plasmid protein in pathogenic strains - so has not been included on this list.|figure legend:Fig 1A, Table 1, Supp. Table 1|comment:Complexes purified from cytosolic lysates|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:zBVODxTU/DGhZWyFaDT5VwWQOEI83333	intact-crc:6352C4503470801C|rigid:8uFgnO10r1Kb+XhlP22x4ratp/o	false	his tag:c-c	-	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P02359	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-543074|ensemblbacteria:BAE77950|uniprotkb:Q2M706|ensemblbacteria:AAC76366	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:rs7_ecoli(display_long)|uniprotkb:rpsG(gene name)|psi-mi:rpsG(display_short)|uniprotkb:Small ribosomal subunit protein uS7(gene name synonym)|uniprotkb:JW3303(locus name)|uniprotkb:b3341(locus name)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463592|imex:IM-12086-3	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	ensemblbacteria:BAE77950(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000049"(tRNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0006412"(translation)|go:"GO:0016020"(membrane)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)|interpro:IPR000235(Ribosomal protein S7)|interpro:IPR005717(Ribosomal protein S7, bacterial-type)|interpro:IPR020606|interpro:IPR023798|interpro:IPR036823|ensemblbacteria:AAC76366(transcript)|ensemblbacteria:b3341(gene)|ensemblbacteria:BAE77950(gene)|rcsb pdb:1M5G|rcsb pdb:1ML5|rcsb pdb:2YKR|rcsb pdb:3J5S|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:4A2I|rcsb pdb:4ADV|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:4V50|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:4V7B|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V85|rcsb pdb:4V89|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5AFI|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5ME0|rcsb pdb:5ME1|rcsb pdb:5MGP|rcsb pdb:5MY1|rcsb pdb:5NO2|rcsb pdb:5NO3|rcsb pdb:5NO4|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5UZ4|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENF|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6O9K|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|refseq:NP_417800.1|refseq:WP_001138045.1|rcsb pdb:1EG0|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6SZS|rcsb pdb:6TBV|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6W7M|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6XE0|rcsb pdb:6XZA|rcsb pdb:6XZB|rcsb pdb:6Y69|rcsb pdb:6ZTJ|rcsb pdb:6ZTL|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|rcsb pdb:6OUO|dip:DIP-10783N	psi-mi:"MI:0469"(intact)	-	-	figure legend:Supp. Fig. 2|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:r5wLLoX3XcQcaPbQESsYwbsFxc483333	intact-crc:A676AC1A3D3F9F9E|rigid:p5CDH6tP2rYV3VvVnxngvpnh/t4	false	-	his tag:c-c	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P0A850	uniprotkb:P0A910	intact:EBI-544862|uniprotkb:P15299|uniprotkb:P22257|uniprotkb:P77603|uniprotkb:Q2MBZ0|ensemblbacteria:AAC73539|ensemblbacteria:BAE76216	intact:EBI-371347|uniprotkb:P02934|ensemblbacteria:AAC74043|ensemblbacteria:BAA35715	psi-mi:tig_ecoli(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:JW0426(locus name)|uniprotkb:b0436(locus name)	psi-mi:ompa_ecoli(display_long)|uniprotkb:ompA(gene name)|psi-mi:ompA(display_short)|uniprotkb:tolG(gene name synonym)|uniprotkb:tut(gene name synonym)|uniprotkb:con(gene name synonym)|uniprotkb:Outer membrane protein II*(gene name synonym)|uniprotkb:b0957(locus name)|uniprotkb:JW0940(locus name)|uniprotkb:Outer membrane porin A(gene name synonym)|uniprotkb:Outer membrane protein 3A(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:Outer membrane protein d(gene name synonym)	psi-mi:"MI:0096"(pull down)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463599|imex:IM-12086-4	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_414970.1|refseq:WP_001198386.1|ensemblbacteria:AAC73539(transcript)|ensemblbacteria:b0436(gene)|ensemblbacteria:BAE76216(gene)|ensemblbacteria:BAE76216(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0009408"(response to heat)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|interpro:IPR027304|interpro:IPR036611|interpro:IPR037041|rcsb pdb:1L1P|rcsb pdb:1OMS|rcsb pdb:1P9Y|rcsb pdb:1W26|rcsb pdb:1W2B|rcsb pdb:2MLX|rcsb pdb:2MLY|rcsb pdb:2MLZ|rcsb pdb:2VRH|rcsb pdb:4URD|rcsb pdb:5OWI|rcsb pdb:5OWJ|rcsb pdb:5ZR0|rcsb pdb:6D6S|rcsb pdb:7D6Z|rcsb pdb:7D80|dip:DIP-36226N	refseq:WP_000750416.1|refseq:NP_415477.1|ensemblbacteria:AAC74043(transcript)|ensemblbacteria:b0957(gene)|ensemblbacteria:BAA35715(gene)|ensemblbacteria:BAA35715(transcript)|go:"GO:0000746"(conjugation)|go:"GO:0006811"(ion transport)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0009597"(detection of virus)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019867"(outer membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046930"(pore complex)|interpro:IPR000498(Outer membrane protein, OmpA-like, transmembrane region)|interpro:IPR002368(Outer membrane protein, OmpA)|interpro:IPR006664(Outer membrane protein, bacterial)|interpro:IPR006690(Outer membrane protein, OmpA-like, conserved site)|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR036737|rcsb pdb:1BXW|rcsb pdb:1G90|rcsb pdb:1QJP|rcsb pdb:2GE4|rcsb pdb:2JMM|rcsb pdb:2MQE|rcsb pdb:3JBU|rcsb pdb:5M2Q|rcsb pdb:6ITC|rcsb pdb:6LYR|interpro:IPR006665(Outer membrane protein, OmpA/MotB, C-terminal)|mint:P0A910|dip:DIP-31879N	psi-mi:"MI:0469"(intact)	-	-	figure legend:Supp. Fig. 2|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/10/14	2014/10/16	rogid:EbLq+XWCsGgpDeC7vB++QNkf+KM83333	rogid:CxKbAqrjV2AUC+f7xNFm73aceRs83333	intact-crc:53BA5E4F0D41FC23|rigid:2qn412Y/+bqSUcR1t1sVbBd5fHc	false	-	his tag:c-c	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P38526	uniprotkb:Q9WZF8	intact:EBI-2463521|ensemblbacteria:AAD36571	intact:EBI-2463534|ensemblbacteria:AAD35776	psi-mi:rs7_thema(display_long)|uniprotkb:rpsG(gene name)|psi-mi:rpsG(display_short)|uniprotkb:TM_1504(locus name)	psi-mi:tig_thema(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:TM_0694(locus name)	psi-mi:"MI:0028"(cosedimentation in solution)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:243274(thema)|taxid:243274("Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)")	taxid:243274(thema)|taxid:243274("Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463551|imex:IM-12086-1	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_229304.1|interpro:IPR000235(Ribosomal protein S7)|interpro:IPR005717(Ribosomal protein S7, bacterial-type)|interpro:IPR020606|interpro:IPR023798|rcsb pdb:3GTY|refseq:WP_004081843.1|interpro:IPR036823|ensemblbacteria:AAD36571(transcript)|ensemblbacteria:TM_1504(gene)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000049"(tRNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005840"(ribosome)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)	interpro:IPR027304|refseq:NP_228503.1|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|rcsb pdb:2NSA|rcsb pdb:2NSB|rcsb pdb:2NSC|rcsb pdb:3GTY|rcsb pdb:3GU0|refseq:WP_004081061.1|rcsb pdb:6J0A|interpro:IPR037041|interpro:IPR036611|interpro:IPR036953|ensemblbacteria:AAD35776(transcript)|ensemblbacteria:TM_0694(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0015031"(protein transport)|go:"GO:0032784"(regulation of DNA-templated transcription, elongation)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)	psi-mi:"MI:0469"(intact)	-	-	figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2009/10/14	2014/10/16	rogid:jHptGQGq0OI9ZVArhn1MkeoMXs8243274	rogid:EbHcZf1e3o+xolnVVXh6iEBAQig243274	intact-crc:18D2245EDFE4CF19|rigid:G+6tuWsygibpxoHiMae2tjMG3BI	false	-	-	1	1	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P38526	uniprotkb:Q9WZF8	intact:EBI-2463521|ensemblbacteria:AAD36571	intact:EBI-2463534|ensemblbacteria:AAD35776	psi-mi:rs7_thema(display_long)|uniprotkb:rpsG(gene name)|psi-mi:rpsG(display_short)|uniprotkb:TM_1504(locus name)	psi-mi:tig_thema(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:TM_0694(locus name)	psi-mi:"MI:0114"(x-ray crystallography)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:243274(thema)|taxid:243274("Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)")	taxid:243274(thema)|taxid:243274("Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)")	psi-mi:"MI:0407"(direct interaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463576|wwpdb:3GTY|imex:IM-12086-5	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_229304.1|interpro:IPR000235(Ribosomal protein S7)|interpro:IPR005717(Ribosomal protein S7, bacterial-type)|interpro:IPR020606|interpro:IPR023798|rcsb pdb:3GTY|refseq:WP_004081843.1|interpro:IPR036823|ensemblbacteria:AAD36571(transcript)|ensemblbacteria:TM_1504(gene)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000049"(tRNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005840"(ribosome)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)	interpro:IPR027304|refseq:NP_228503.1|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|rcsb pdb:2NSA|rcsb pdb:2NSB|rcsb pdb:2NSC|rcsb pdb:3GTY|rcsb pdb:3GU0|refseq:WP_004081061.1|rcsb pdb:6J0A|interpro:IPR037041|interpro:IPR036611|interpro:IPR036953|ensemblbacteria:AAD35776(transcript)|ensemblbacteria:TM_0694(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0015031"(protein transport)|go:"GO:0032784"(regulation of DNA-templated transcription, elongation)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)	-	-	-	figure legend:Supp. Table 3, Supp. Table 4|3d-resolution:3.3A|3d-r-factors:Rworking=25.7%, Rfree=32.8%|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2009/10/14	2014/10/16	rogid:jHptGQGq0OI9ZVArhn1MkeoMXs8243274	rogid:EbHcZf1e3o+xolnVVXh6iEBAQig243274	intact-crc:6822FABE174BB445|rigid:G+6tuWsygibpxoHiMae2tjMG3BI	false	sufficient binding region:9-155	-	1	1	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P38526	uniprotkb:Q9WZF8	intact:EBI-2463521|ensemblbacteria:AAD36571	intact:EBI-2463534|ensemblbacteria:AAD35776	psi-mi:rs7_thema(display_long)|uniprotkb:rpsG(gene name)|psi-mi:rpsG(display_short)|uniprotkb:TM_1504(locus name)	psi-mi:tig_thema(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:TM_0694(locus name)	psi-mi:"MI:0107"(surface plasmon resonance)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:243274(thema)|taxid:243274("Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)")	taxid:243274(thema)|taxid:243274("Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)")	psi-mi:"MI:0407"(direct interaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463612|imex:IM-12086-6	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_229304.1|interpro:IPR000235(Ribosomal protein S7)|interpro:IPR005717(Ribosomal protein S7, bacterial-type)|interpro:IPR020606|interpro:IPR023798|rcsb pdb:3GTY|refseq:WP_004081843.1|interpro:IPR036823|ensemblbacteria:AAD36571(transcript)|ensemblbacteria:TM_1504(gene)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000049"(tRNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005840"(ribosome)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)	interpro:IPR027304|refseq:NP_228503.1|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|rcsb pdb:2NSA|rcsb pdb:2NSB|rcsb pdb:2NSC|rcsb pdb:3GTY|rcsb pdb:3GU0|refseq:WP_004081061.1|rcsb pdb:6J0A|interpro:IPR037041|interpro:IPR036611|interpro:IPR036953|ensemblbacteria:AAD35776(transcript)|ensemblbacteria:TM_0694(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0015031"(protein transport)|go:"GO:0032784"(regulation of DNA-templated transcription, elongation)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)	psi-mi:"MI:0469"(intact)	-	-	figure legend:Supp. Fig. 5B|kinetics:ka = 5.03 x 103 M-1s-1, kd = 1.75 x 10-2 s-1 and KD = 3.5 10-6 M.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2009/10/14	2014/10/16	rogid:jHptGQGq0OI9ZVArhn1MkeoMXs8243274	rogid:EbHcZf1e3o+xolnVVXh6iEBAQig243274	intact-crc:B0B0942A8117FA8C|rigid:G+6tuWsygibpxoHiMae2tjMG3BI	false	-	-	1	1	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q9WZF8	uniprotkb:P38526	intact:EBI-2463534|ensemblbacteria:AAD35776	intact:EBI-2463521|ensemblbacteria:AAD36571	psi-mi:tig_thema(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:TM_0694(locus name)	psi-mi:rs7_thema(display_long)|uniprotkb:rpsG(gene name)|psi-mi:rpsG(display_short)|uniprotkb:TM_1504(locus name)	psi-mi:"MI:0030"(cross-linking study)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:243274(thema)|taxid:243274("Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)")	taxid:243274(thema)|taxid:243274("Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)")	psi-mi:"MI:0407"(direct interaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463625|imex:IM-12086-7	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR027304|refseq:NP_228503.1|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|rcsb pdb:2NSA|rcsb pdb:2NSB|rcsb pdb:2NSC|rcsb pdb:3GTY|rcsb pdb:3GU0|refseq:WP_004081061.1|rcsb pdb:6J0A|interpro:IPR037041|interpro:IPR036611|interpro:IPR036953|ensemblbacteria:AAD35776(transcript)|ensemblbacteria:TM_0694(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0015031"(protein transport)|go:"GO:0032784"(regulation of DNA-templated transcription, elongation)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)	refseq:NP_229304.1|interpro:IPR000235(Ribosomal protein S7)|interpro:IPR005717(Ribosomal protein S7, bacterial-type)|interpro:IPR020606|interpro:IPR023798|rcsb pdb:3GTY|refseq:WP_004081843.1|interpro:IPR036823|ensemblbacteria:AAD36571(transcript)|ensemblbacteria:TM_1504(gene)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000049"(tRNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005840"(ribosome)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)	psi-mi:"MI:0469"(intact)	-	-	figure legend:Supp. Fig. 13C|comment:N-terminal deletion mutants of TIG reduced the size of, not did not completely inhibit, complex formation.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2009/10/14	2014/10/16	rogid:EbHcZf1e3o+xolnVVXh6iEBAQig243274	rogid:jHptGQGq0OI9ZVArhn1MkeoMXs8243274	intact-crc:B777EC5DEF82D218|rigid:G+6tuWsygibpxoHiMae2tjMG3BI	false	-	sufficient binding region:9-155	1	1	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q9WZF8	uniprotkb:P38526	intact:EBI-2463534|ensemblbacteria:AAD35776	intact:EBI-2463521|ensemblbacteria:AAD36571	psi-mi:tig_thema(display_long)|uniprotkb:tig(gene name)|psi-mi:tig(display_short)|uniprotkb:PPIase(gene name synonym)|uniprotkb:TM_0694(locus name)	psi-mi:rs7_thema(display_long)|uniprotkb:rpsG(gene name)|psi-mi:rpsG(display_short)|uniprotkb:TM_1504(locus name)	psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis)	Martinez-Hackert et al. (2009)	imex:IM-12086|pubmed:19737520	taxid:243274(thema)|taxid:243274("Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)")	taxid:243274(thema)|taxid:243274("Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2463639|imex:IM-12086-8	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR027304|refseq:NP_228503.1|interpro:IPR005215(Trigger factor)|interpro:IPR008880(Trigger factor, C-terminal, bacterial)|interpro:IPR008881(Trigger factor, ribosome-binding, bacterial)|rcsb pdb:2NSA|rcsb pdb:2NSB|rcsb pdb:2NSC|rcsb pdb:3GTY|rcsb pdb:3GU0|refseq:WP_004081061.1|rcsb pdb:6J0A|interpro:IPR037041|interpro:IPR036611|interpro:IPR036953|ensemblbacteria:AAD35776(transcript)|ensemblbacteria:TM_0694(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0015031"(protein transport)|go:"GO:0032784"(regulation of DNA-templated transcription, elongation)|go:"GO:0043022"(ribosome binding)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051083"('de novo' cotranslational protein folding)|go:"GO:0051301"(cell division)|go:"GO:0061077"(chaperone-mediated protein folding)	refseq:NP_229304.1|interpro:IPR000235(Ribosomal protein S7)|interpro:IPR005717(Ribosomal protein S7, bacterial-type)|interpro:IPR020606|interpro:IPR023798|rcsb pdb:3GTY|refseq:WP_004081843.1|interpro:IPR036823|ensemblbacteria:AAD36571(transcript)|ensemblbacteria:TM_1504(gene)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0000049"(tRNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005840"(ribosome)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022627"(cytosolic small ribosomal subunit)	psi-mi:"MI:0469"(intact)	-	-	figure legend:Supp. Fig. 13B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2009/10/14	2014/10/16	rogid:EbHcZf1e3o+xolnVVXh6iEBAQig243274	rogid:jHptGQGq0OI9ZVArhn1MkeoMXs8243274	intact-crc:752B8F0D890D74D5|rigid:G+6tuWsygibpxoHiMae2tjMG3BI	false	mutation disrupting interaction:269-269,273-273,266-266	sufficient binding region:9-155	1	1	psi-mi:"MI:0816"(molecular weight estimation by staining)	psi-mi:"MI:0816"(molecular weight estimation by staining)