#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:P60281	uniprotkb:A0R561	intact:EBI-2408357|uniprotkb:A0QS65|uniprotkb:I7G3Q0|ensemblbacteria:ABK70312|ensemblbacteria:AFP37801	intact:EBI-2408339|ensemblbacteria:ABK72642|ensemblbacteria:AFP42350	psi-mi:rpob_mycs2(display_long)|uniprotkb:rpoB(gene name)|psi-mi:rpoB(display_short)|uniprotkb:Transcriptase subunit beta(gene name synonym)|uniprotkb:RNA polymerase subunit beta(gene name synonym)|uniprotkb:MSMEG_1367(locus name)|uniprotkb:MSMEI_1328(locus name)	psi-mi:card_mycs2(display_long)|uniprotkb:carD(gene name)|psi-mi:carD(display_short)|uniprotkb:MSMEG_6077(locus name)|uniprotkb:MSMEI_5917(locus name)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Stallings et al. (2009)	imex:IM-12202|pubmed:19596241	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2408347|imex:IM-12202-2	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	rcsb pdb:6EYD|rcsb pdb:6F6W|rcsb pdb:6DCF|interpro:IPR037033|interpro:IPR037034|refseq:YP_885753.1|interpro:IPR010243(DNA-directed RNA polymerase, beta subunit, bacterial-type)|interpro:IPR019462|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|rcsb pdb:5TW1|refseq:WP_011727628.1|rcsb pdb:5VI8|rcsb pdb:5VI5|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6CCE|rcsb pdb:6CCV|interpro:IPR042107|rcsb pdb:6VVS|rcsb pdb:6VVT|rcsb pdb:6VVV|rcsb pdb:6YXU|rcsb pdb:6YYS|rcsb pdb:6Z11|ensemblbacteria:ABK70312(transcript)|ensemblbacteria:AFP37801(transcript)|ensemblbacteria:MSMEG_1367(gene)|ensemblbacteria:MSMEI_1328(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046677"(response to antibiotic)	interpro:IPR003711(Transcription factor CarD)|refseq:YP_890299.1|refseq:WP_011731020.1|interpro:IPR042215|interpro:IPR036101|ensemblbacteria:ABK72642(transcript)|ensemblbacteria:AFP42350(transcript)|ensemblbacteria:MSMEG_6077(gene)|ensemblbacteria:MSMEI_5917(gene)	psi-mi:"MI:0469"(intact)	-	-	figure legend:Fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	-	2009/08/06	2014/10/16	rogid:mUxhD0oab8mFtPElhEZK1+eRm7g246196	rogid:ZT1SHU0Vcex3ByQ/jOHlFf3avkM246196	intact-crc:B91292C3E31B71CF|rigid:WOxuzA86SuyV29CjppwK7XA58WA	false	-	ha tag:?-?	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:A0R561	uniprotkb:P0A8V2	intact:EBI-2408339|ensemblbacteria:ABK72642|ensemblbacteria:AFP42350	intact:EBI-544996|uniprotkb:P00575|uniprotkb:P00576|uniprotkb:P78242|uniprotkb:Q2M8S3|ensemblbacteria:AAC76961|ensemblbacteria:BAE77333	psi-mi:card_mycs2(display_long)|uniprotkb:carD(gene name)|psi-mi:carD(display_short)|uniprotkb:MSMEG_6077(locus name)|uniprotkb:MSMEI_5917(locus name)	psi-mi:rpob_ecoli(display_long)|uniprotkb:rpoB(gene name)|psi-mi:rpoB(display_short)|uniprotkb:groN(gene name synonym)|uniprotkb:nitB(gene name synonym)|uniprotkb:rif(gene name synonym)|uniprotkb:ron(gene name synonym)|uniprotkb:stl(gene name synonym)|uniprotkb:stv(gene name synonym)|uniprotkb:tabD(gene name synonym)|uniprotkb:b3987(locus name)|uniprotkb:Transcriptase subunit beta(gene name synonym)|uniprotkb:RNA polymerase subunit beta(gene name synonym)|uniprotkb:JW3950(locus name)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Stallings et al. (2009)	imex:IM-12202|pubmed:19596241	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2408491|imex:IM-12202-1	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR003711(Transcription factor CarD)|refseq:YP_890299.1|refseq:WP_011731020.1|interpro:IPR042215|interpro:IPR036101|ensemblbacteria:ABK72642(transcript)|ensemblbacteria:AFP42350(transcript)|ensemblbacteria:MSMEG_6077(gene)|ensemblbacteria:MSMEI_5917(gene)	refseq:NP_418414.1|refseq:WP_000263098.1|ensemblbacteria:AAC76961(transcript)|ensemblbacteria:b3987(gene)|ensemblbacteria:BAE77333(gene)|ensemblbacteria:BAE77333(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0016020"(membrane)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046677"(response to antibiotic)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR010243(DNA-directed RNA polymerase, beta subunit, bacterial-type)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR019462|interpro:IPR037033|interpro:IPR037034|interpro:IPR042107|rcsb pdb:3IYD|rcsb pdb:3LTI|rcsb pdb:3LU0|rcsb pdb:3T72|rcsb pdb:3TBI|rcsb pdb:4JK1|rcsb pdb:4JK2|rcsb pdb:4KMU|rcsb pdb:4KN4|rcsb pdb:4KN7|rcsb pdb:4MEX|rcsb pdb:4MEY|rcsb pdb:4S20|rcsb pdb:4XSX|rcsb pdb:4XSY|rcsb pdb:4XSZ|rcsb pdb:4YG2|rcsb pdb:4YLN|rcsb pdb:4YLO|rcsb pdb:4YLP|rcsb pdb:4ZH2|rcsb pdb:4ZH3|rcsb pdb:4ZH4|rcsb pdb:5BYH|rcsb pdb:5EZK|rcsb pdb:5IPL|rcsb pdb:5IPM|rcsb pdb:5IPN|rcsb pdb:5MS0|rcsb pdb:5MY1|rcsb pdb:5NSR|rcsb pdb:5NSS|rcsb pdb:5NWT|rcsb pdb:5UAC|rcsb pdb:6GH5|rcsb pdb:6GH6|rcsb pdb:6JBQ|rcsb pdb:6JNX|rcsb pdb:6K4Y|rcsb pdb:6KJ6|rcsb pdb:6LDI|rcsb pdb:6N4C|rcsb pdb:6N57|rcsb pdb:6N58|rcsb pdb:6N60|rcsb pdb:6N61|rcsb pdb:6OMF|rcsb pdb:6OUL|rcsb pdb:6P18|rcsb pdb:6P19|rcsb pdb:6P1K|rcsb pdb:6PSQ|rcsb pdb:6PSR|rcsb pdb:6PSS|rcsb pdb:6PST|rcsb pdb:6PSU|rcsb pdb:6PSV|rcsb pdb:6PSW|rcsb pdb:6R9B|rcsb pdb:6R9G|rcsb pdb:6RH3|rcsb pdb:6RI7|rcsb pdb:6RI9|rcsb pdb:6RIN|rcsb pdb:6RIP|rcsb pdb:6TQN|rcsb pdb:6TQO|rcsb pdb:6UTV|rcsb pdb:6VJS|rcsb pdb:6WMU|rcsb pdb:6X2F|rcsb pdb:6X2N|rcsb pdb:6X43|rcsb pdb:6X4W|rcsb pdb:6X4Y|rcsb pdb:6X50|rcsb pdb:6XAS|rcsb pdb:6XAV|rcsb pdb:6Z9P|rcsb pdb:6Z9Q|rcsb pdb:6Z9R|rcsb pdb:6Z9S|rcsb pdb:6Z9T|rcsb pdb:6ZTL|rcsb pdb:7ADB|rcsb pdb:7ADC|rcsb pdb:7ADD|rcsb pdb:7ADE|rcsb pdb:7C17|rcsb pdb:7C97|rcsb pdb:7CHW|rcsb pdb:7KHB|rcsb pdb:7KHC|rcsb pdb:7KHE|rcsb pdb:7KHI|rcsb pdb:5UAG|rcsb pdb:5UAH|rcsb pdb:5UAJ|rcsb pdb:5UAL|rcsb pdb:5UAQ|rcsb pdb:5VSW|rcsb pdb:5VT0|rcsb pdb:5W1S|rcsb pdb:5W1T|rcsb pdb:6ALF|rcsb pdb:6ALG|rcsb pdb:6ALH|rcsb pdb:6ASX|rcsb pdb:6BJS|rcsb pdb:6BYU|rcsb pdb:6C6S|rcsb pdb:6C6T|rcsb pdb:6C6U|rcsb pdb:6C9Y|rcsb pdb:6CA0|rcsb pdb:6CUX|rcsb pdb:6FLP|rcsb pdb:6FLQ|rcsb pdb:6GFW|dip:DIP-35777N	psi-mi:"MI:0469"(intact)	-	-	figure legend:Fig. 6F|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	-	2009/08/06	2014/10/16	rogid:ZT1SHU0Vcex3ByQ/jOHlFf3avkM246196	rogid:K9pRCxbEIBkKUFwpFYd0/YJ2n2483333	intact-crc:65E44D6746679B75|rigid:tcsok6qIx6MWqh26SJC3oYSYYTE	false	ha tag:?-?|sufficient binding region:1-104(IPR003711)	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:A0R561	uniprotkb:A0QSL8	intact:EBI-2408339|ensemblbacteria:ABK72642|ensemblbacteria:AFP42350	intact:EBI-2408389|uniprotkb:I7G472|ensemblbacteria:ABK71739|ensemblbacteria:AFP37961	psi-mi:card_mycs2(display_long)|uniprotkb:carD(gene name)|psi-mi:carD(display_short)|uniprotkb:MSMEG_6077(locus name)|uniprotkb:MSMEI_5917(locus name)	psi-mi:rpoa_mycs2(display_long)|uniprotkb:rpoA(gene name)|psi-mi:rpoA(display_short)|uniprotkb:Transcriptase subunit alpha(gene name synonym)|uniprotkb:RNA polymerase subunit alpha(gene name synonym)|uniprotkb:MSMEG_1524(locus name)|uniprotkb:MSMEI_1488(locus name)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Stallings et al. (2009)	imex:IM-12202|pubmed:19596241	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2408425|imex:IM-12202-3	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR003711(Transcription factor CarD)|refseq:YP_890299.1|refseq:WP_011731020.1|interpro:IPR042215|interpro:IPR036101|ensemblbacteria:ABK72642(transcript)|ensemblbacteria:AFP42350(transcript)|ensemblbacteria:MSMEG_6077(gene)|ensemblbacteria:MSMEI_5917(gene)	rcsb pdb:6EYD|rcsb pdb:6F6W|rcsb pdb:6DCF|refseq:YP_885906.1|interpro:IPR011262(DNA-directed RNA polymerase, insert)|interpro:IPR011263(DNA-directed RNA polymerase, RpoA/D/Rpb3-type)|interpro:IPR011773(DNA-directed RNA polymerase, alpha subunit)|interpro:IPR011260(RNA polymerase, alpha subunit, C-terminal)|rcsb pdb:5TW1|refseq:WP_003892912.1|rcsb pdb:5VI8|interpro:IPR036603|interpro:IPR036643|rcsb pdb:5VI5|rcsb pdb:6CCE|rcsb pdb:6CCV|rcsb pdb:6VVS|rcsb pdb:6VVT|rcsb pdb:6VVV|rcsb pdb:6YXU|rcsb pdb:6YYS|rcsb pdb:6Z11|ensemblbacteria:ABK71739(transcript)|ensemblbacteria:AFP37961(transcript)|ensemblbacteria:MSMEG_1524(gene)|ensemblbacteria:MSMEI_1488(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0046983"(protein dimerization activity)	psi-mi:"MI:0469"(intact)	-	-	figure legend:Fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	-	2009/08/06	2014/10/16	rogid:ZT1SHU0Vcex3ByQ/jOHlFf3avkM246196	rogid:BtHqzT1yhyMOwlBRQvbjjc4pn94246196	intact-crc:2195C51338ED8B06|rigid:6V4xvIl2WFM/n1KArmKHY59P2/I	false	ha tag:?-?	-	-	-	psi-mi:"MI:0082"(peptide massfingerprinting)	psi-mi:"MI:0082"(peptide massfingerprinting)
uniprotkb:A0R561	uniprotkb:P60281	intact:EBI-2408339|ensemblbacteria:ABK72642|ensemblbacteria:AFP42350	intact:EBI-2408357|uniprotkb:A0QS65|uniprotkb:I7G3Q0|ensemblbacteria:ABK70312|ensemblbacteria:AFP37801	psi-mi:card_mycs2(display_long)|uniprotkb:carD(gene name)|psi-mi:carD(display_short)|uniprotkb:MSMEG_6077(locus name)|uniprotkb:MSMEI_5917(locus name)	psi-mi:rpob_mycs2(display_long)|uniprotkb:rpoB(gene name)|psi-mi:rpoB(display_short)|uniprotkb:Transcriptase subunit beta(gene name synonym)|uniprotkb:RNA polymerase subunit beta(gene name synonym)|uniprotkb:MSMEG_1367(locus name)|uniprotkb:MSMEI_1328(locus name)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Stallings et al. (2009)	imex:IM-12202|pubmed:19596241	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2408425|imex:IM-12202-3	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR003711(Transcription factor CarD)|refseq:YP_890299.1|refseq:WP_011731020.1|interpro:IPR042215|interpro:IPR036101|ensemblbacteria:ABK72642(transcript)|ensemblbacteria:AFP42350(transcript)|ensemblbacteria:MSMEG_6077(gene)|ensemblbacteria:MSMEI_5917(gene)	rcsb pdb:6EYD|rcsb pdb:6F6W|rcsb pdb:6DCF|interpro:IPR037033|interpro:IPR037034|refseq:YP_885753.1|interpro:IPR010243(DNA-directed RNA polymerase, beta subunit, bacterial-type)|interpro:IPR019462|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|rcsb pdb:5TW1|refseq:WP_011727628.1|rcsb pdb:5VI8|rcsb pdb:5VI5|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6CCE|rcsb pdb:6CCV|interpro:IPR042107|rcsb pdb:6VVS|rcsb pdb:6VVT|rcsb pdb:6VVV|rcsb pdb:6YXU|rcsb pdb:6YYS|rcsb pdb:6Z11|ensemblbacteria:ABK70312(transcript)|ensemblbacteria:AFP37801(transcript)|ensemblbacteria:MSMEG_1367(gene)|ensemblbacteria:MSMEI_1328(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046677"(response to antibiotic)	psi-mi:"MI:0469"(intact)	-	-	figure legend:Fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	-	2009/08/06	2014/10/16	rogid:ZT1SHU0Vcex3ByQ/jOHlFf3avkM246196	rogid:mUxhD0oab8mFtPElhEZK1+eRm7g246196	intact-crc:2195C51338ED8B06|rigid:6V4xvIl2WFM/n1KArmKHY59P2/I	false	ha tag:?-?	-	-	-	psi-mi:"MI:0082"(peptide massfingerprinting)	psi-mi:"MI:0082"(peptide massfingerprinting)
uniprotkb:A0R561	uniprotkb:A0QS66	intact:EBI-2408339|ensemblbacteria:ABK72642|ensemblbacteria:AFP42350	intact:EBI-2408406|uniprotkb:I7FY06|ensemblbacteria:ABK71951|ensemblbacteria:AFP37802	psi-mi:card_mycs2(display_long)|uniprotkb:carD(gene name)|psi-mi:carD(display_short)|uniprotkb:MSMEG_6077(locus name)|uniprotkb:MSMEI_5917(locus name)	psi-mi:rpoc_mycs2(display_long)|uniprotkb:Transcriptase subunit beta'(gene name synonym)|uniprotkb:MSMEG_1368(locus name)|uniprotkb:rpoC(gene name)|psi-mi:rpoC(display_short)|uniprotkb:RNA polymerase subunit beta'(gene name synonym)|uniprotkb:MSMEI_1329(locus name)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Stallings et al. (2009)	imex:IM-12202|pubmed:19596241	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2408425|imex:IM-12202-3	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR003711(Transcription factor CarD)|refseq:YP_890299.1|refseq:WP_011731020.1|interpro:IPR042215|interpro:IPR036101|ensemblbacteria:ABK72642(transcript)|ensemblbacteria:AFP42350(transcript)|ensemblbacteria:MSMEG_6077(gene)|ensemblbacteria:MSMEI_5917(gene)	rcsb pdb:6EYD|rcsb pdb:6F6W|rcsb pdb:6DCF|interpro:IPR038120|refseq:YP_885754.1|interpro:IPR012754(DNA-directed RNA polymerase, subunit beta-prime)|interpro:IPR000722(RNA polymerase, alpha subunit)|interpro:IPR006592(RNA polymerase, N-terminal)|interpro:IPR007080(RNA polymerase Rpb1, domain 1)|interpro:IPR007066(RNA polymerase Rpb1, domain 3)|interpro:IPR007083(RNA polymerase Rpb1, domain 4)|interpro:IPR007081(RNA polymerase Rpb1, domain 5)|rcsb pdb:5TW1|refseq:WP_003892756.1|rcsb pdb:5VI8|rcsb pdb:5VI5|rcsb pdb:6CCE|rcsb pdb:6CCV|interpro:IPR042102|rcsb pdb:6VVS|rcsb pdb:6VVT|rcsb pdb:6VVV|rcsb pdb:6YXU|rcsb pdb:6YYS|rcsb pdb:6Z11|ensemblbacteria:ABK71951(transcript)|ensemblbacteria:AFP37802(transcript)|ensemblbacteria:MSMEG_1368(gene)|ensemblbacteria:MSMEI_1329(gene)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0008270"(zinc ion binding)	psi-mi:"MI:0469"(intact)	-	-	figure legend:Fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:246196(mycs2)|taxid:246196("Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)")	-	2009/08/06	2014/10/16	rogid:ZT1SHU0Vcex3ByQ/jOHlFf3avkM246196	rogid:MTHmATLAdT1hRH9bLpUh70jBSRc246196	intact-crc:2195C51338ED8B06|rigid:6V4xvIl2WFM/n1KArmKHY59P2/I	false	ha tag:?-?	-	-	-	psi-mi:"MI:0082"(peptide massfingerprinting)	psi-mi:"MI:0082"(peptide massfingerprinting)
uniprotkb:Q8RQE9	uniprotkb:Q5SLX5	intact:EBI-2106897|uniprotkb:Q5SHB7|ensemblbacteria:BAD71636	intact:EBI-2408442|ensemblbacteria:BAD69991	psi-mi:rpob_thet8(display_long)|uniprotkb:Transcriptase subunit beta(gene name synonym)|uniprotkb:RNA polymerase subunit beta(gene name synonym)|uniprotkb:TTHA1813(locus name)|uniprotkb:rpoB(gene name)|psi-mi:rpoB(display_short)	psi-mi:q5slx5_thet8(display_long)|uniprotkb:TTHA0168(locus name)	psi-mi:"MI:0655"(lambda repressor two hybrid)	Stallings et al. (2009)	imex:IM-12202|pubmed:19596241	taxid:300852(thet8)|taxid:300852("Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)")	taxid:300852(thet8)|taxid:300852("Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2408440|imex:IM-12202-5	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:YP_145079.1|refseq:WP_011228935.1|dip:DIP-47011N|ensemblbacteria:BAD71636(gene)|ensemblbacteria:BAD71636(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0032549"(ribonucleoside binding)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR010243(DNA-directed RNA polymerase, beta subunit, bacterial-type)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR019462|interpro:IPR037033|interpro:IPR037034|interpro:IPR042107|rcsb pdb:1IW7|rcsb pdb:1SMY|rcsb pdb:1ZYR|rcsb pdb:2A68|rcsb pdb:2A69|rcsb pdb:2A6E|rcsb pdb:2A6H|rcsb pdb:2BE5|rcsb pdb:2CW0|rcsb pdb:2O5I|rcsb pdb:2O5J|rcsb pdb:2PPB|rcsb pdb:3AOH|rcsb pdb:3AOI|rcsb pdb:3DXJ|rcsb pdb:3EQL|rcsb pdb:3WOD|rcsb pdb:3WOE|rcsb pdb:3WOF|rcsb pdb:4G7H|rcsb pdb:4G7O|rcsb pdb:4G7Z|rcsb pdb:4GZY|rcsb pdb:4GZZ|rcsb pdb:4MQ9|rcsb pdb:4OIN|rcsb pdb:4OIO|rcsb pdb:4OIP|rcsb pdb:4OIQ|rcsb pdb:4OIR|rcsb pdb:4Q4Z|rcsb pdb:4Q5S|rcsb pdb:4WQS|rcsb pdb:4WQT|rcsb pdb:5D4C|rcsb pdb:5D4D|rcsb pdb:5D4E|rcsb pdb:5E17|rcsb pdb:5E18|rcsb pdb:5I2D|rcsb pdb:5TMC|rcsb pdb:5TMF|rcsb pdb:5VO8|rcsb pdb:5VOI|rcsb pdb:5X21|rcsb pdb:5X22|rcsb pdb:5XJ0|rcsb pdb:6ASG|rcsb pdb:6KQD|rcsb pdb:6KQE|rcsb pdb:6KQF|rcsb pdb:6KQH|rcsb pdb:6KQL|rcsb pdb:6KQM|rcsb pdb:6KQN|rcsb pdb:6L74|rcsb pdb:6LTS|rcsb pdb:6M6A|rcsb pdb:6M6B|rcsb pdb:6M6C|rcsb pdb:6OVR|rcsb pdb:6OVY|rcsb pdb:6OW3|rcsb pdb:6OY5|rcsb pdb:6OY6|rcsb pdb:6OY7|rcsb pdb:6P70|rcsb pdb:6P71|rcsb pdb:6WOX|rcsb pdb:6WOY|rcsb pdb:6KQG	rcsb pdb:4L5G|rcsb pdb:4XAX|interpro:IPR003711(Transcription factor CarD)|refseq:YP_143434.1|refseq:WP_011227752.1|interpro:IPR042215|interpro:IPR036101|ensemblbacteria:BAD69991(gene)|ensemblbacteria:BAD69991(transcript)	psi-mi:"MI:0469"(intact)	-	-	figure legend:Fig. 5E|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/08/06	2014/10/16	rogid:U03u3vgmDfae6t/s+swi6onzou8300852	rogid:HpAvOHPZFwmpl3LGgsK7J0vjEBo300852	intact-crc:28ACCAA98CA1F02E|rigid:MbcYohaPPKrl5fial7mEOYLD36s	false	sufficient binding region:10-133	sufficient binding region:1-66	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q8RQE9	uniprotkb:Q5SJW3	intact:EBI-2106897|uniprotkb:Q5SHB7|ensemblbacteria:BAD71636	intact:EBI-2408457|ensemblbacteria:BAD70712	psi-mi:rpob_thet8(display_long)|uniprotkb:Transcriptase subunit beta(gene name synonym)|uniprotkb:RNA polymerase subunit beta(gene name synonym)|uniprotkb:TTHA1813(locus name)|uniprotkb:rpoB(gene name)|psi-mi:rpoB(display_short)	psi-mi:q5sjw3_thet8(display_long)|uniprotkb:mfd(gene name)|psi-mi:mfd(display_short)|uniprotkb:TTHA0889(locus name)	psi-mi:"MI:0655"(lambda repressor two hybrid)	Stallings et al. (2009)	imex:IM-12202|pubmed:19596241	taxid:300852(thet8)|taxid:300852("Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)")	taxid:300852(thet8)|taxid:300852("Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-2408475|imex:IM-12202-4	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:YP_145079.1|refseq:WP_011228935.1|dip:DIP-47011N|ensemblbacteria:BAD71636(gene)|ensemblbacteria:BAD71636(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0032549"(ribonucleoside binding)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR010243(DNA-directed RNA polymerase, beta subunit, bacterial-type)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR019462|interpro:IPR037033|interpro:IPR037034|interpro:IPR042107|rcsb pdb:1IW7|rcsb pdb:1SMY|rcsb pdb:1ZYR|rcsb pdb:2A68|rcsb pdb:2A69|rcsb pdb:2A6E|rcsb pdb:2A6H|rcsb pdb:2BE5|rcsb pdb:2CW0|rcsb pdb:2O5I|rcsb pdb:2O5J|rcsb pdb:2PPB|rcsb pdb:3AOH|rcsb pdb:3AOI|rcsb pdb:3DXJ|rcsb pdb:3EQL|rcsb pdb:3WOD|rcsb pdb:3WOE|rcsb pdb:3WOF|rcsb pdb:4G7H|rcsb pdb:4G7O|rcsb pdb:4G7Z|rcsb pdb:4GZY|rcsb pdb:4GZZ|rcsb pdb:4MQ9|rcsb pdb:4OIN|rcsb pdb:4OIO|rcsb pdb:4OIP|rcsb pdb:4OIQ|rcsb pdb:4OIR|rcsb pdb:4Q4Z|rcsb pdb:4Q5S|rcsb pdb:4WQS|rcsb pdb:4WQT|rcsb pdb:5D4C|rcsb pdb:5D4D|rcsb pdb:5D4E|rcsb pdb:5E17|rcsb pdb:5E18|rcsb pdb:5I2D|rcsb pdb:5TMC|rcsb pdb:5TMF|rcsb pdb:5VO8|rcsb pdb:5VOI|rcsb pdb:5X21|rcsb pdb:5X22|rcsb pdb:5XJ0|rcsb pdb:6ASG|rcsb pdb:6KQD|rcsb pdb:6KQE|rcsb pdb:6KQF|rcsb pdb:6KQH|rcsb pdb:6KQL|rcsb pdb:6KQM|rcsb pdb:6KQN|rcsb pdb:6L74|rcsb pdb:6LTS|rcsb pdb:6M6A|rcsb pdb:6M6B|rcsb pdb:6M6C|rcsb pdb:6OVR|rcsb pdb:6OVY|rcsb pdb:6OW3|rcsb pdb:6OY5|rcsb pdb:6OY6|rcsb pdb:6OY7|rcsb pdb:6P70|rcsb pdb:6P71|rcsb pdb:6WOX|rcsb pdb:6WOY|rcsb pdb:6KQG	refseq:WP_011228274.1|interpro:IPR037235|refseq:YP_144155.1|interpro:IPR003711(Transcription factor CarD)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR004576(Transcription-repair coupling factor)|interpro:IPR005118(TRCF)|interpro:IPR027417|interpro:IPR036101|ensemblbacteria:BAD70712(gene)|ensemblbacteria:BAD70712(transcript)|go:"GO:0000716"(transcription-coupled nucleotide-excision repair, DNA damage recognition)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0016787"(hydrolase activity)	psi-mi:"MI:0469"(intact)	-	-	figure legend:Fig. 5E|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)")	-	2009/08/06	2014/10/16	rogid:U03u3vgmDfae6t/s+swi6onzou8300852	rogid:wJhYjUw84bQSA6x/DddiMft/rEU300852	intact-crc:CFFA7AC34C8386FA|rigid:nI4J/c3M+t1t1Shb0Z2DRlpA/is	false	sufficient binding region:10-133	sufficient binding region:314-444(IPR003711)	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)