#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q9SYP1 uniprotkb:Q9LNC5 intact:EBI-1787068|uniprotkb:Q56Z02|uniprotkb:Q8W577|ensemblplants:AT1G20960.1|ensemblplants:AT1G20960.2 intact:EBI-2292267|ensemblplants:AT1G06220.1|ensemblplants:AT1G06220.2|ensemblplants:AT1G06220.3 psi-mi:dexhc_arath(display_long)|uniprotkb:BRR2A(gene name)|psi-mi:BRR2A(display_short)|uniprotkb:BRR2 homolog A(gene name synonym)|uniprotkb:EMB1507(gene name synonym)|uniprotkb:Pre-mRNA-splicing helicase BRR2A(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 1507(gene name synonym)|uniprotkb:F9H16.5(orf name)|uniprotkb:At1g20960(locus name) psi-mi:clo_arath(display_long)|uniprotkb:CLO(gene name)|psi-mi:CLO(display_short)|uniprotkb:GFA1(gene name synonym)|uniprotkb:MEE5(gene name synonym)|uniprotkb:Protein CLOTHO(gene name synonym)|uniprotkb:Protein GAMETOPHYTE FACTOR 1(gene name synonym)|uniprotkb:Protein MATERNAL EFFECT EMBRYO ARREST 5(gene name synonym)|uniprotkb:Protein VAJRA-1(gene name synonym)|uniprotkb:SNU114 homolog(gene name synonym)|uniprotkb:VAJ-1(gene name synonym)|uniprotkb:F9P14.8(orf name)|uniprotkb:At1g06220(locus name) psi-mi:"MI:0018"(two hybrid) Liu et al. (2009) pubmed:19261069|imex:IM-19475 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2292289|imex:IM-19475-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR004179(Sec63)|refseq:NP_001185050.1|refseq:NP_173520.1|interpro:IPR036388|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR027417|interpro:IPR035892|interpro:IPR036390|interpro:IPR041094|ensemblplants:AT1G20960(gene)|ensemblplants:AT1G20960.1(transcript)|ensemblplants:AT1G20960.2(transcript)|go:"GO:0000388"("spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0010228"(vegetative to reproductive phase transition of meristem)|go:"GO:0140603"(obsolete ATP hydrolysis activity) interpro:IPR031950|refseq:NP_172112.1|refseq:NP_849600.1|interpro:IPR000795(Protein synthesis factor, GTP-binding)|interpro:IPR020568|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR000640(Translation elongation factor EFG/EF2, C-terminal)|interpro:IPR005517(Translation elongation factor EFG/EF2, domain IV)|interpro:IPR004161(Translation elongation factor EFTu/EF1A, domain 2)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR044121|refseq:NP_001321282.1|interpro:IPR027417|interpro:IPR035647|interpro:IPR035655|ensemblplants:AT1G06220(gene)|ensemblplants:AT1G06220.1(transcript)|ensemblplants:AT1G06220.2(transcript)|ensemblplants:AT1G06220.3(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005618"(cell wall)|go:"GO:0005886"(plasma membrane)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0016607"(nuclear speck)|go:"GO:0030623"(U5 snRNA binding)|go:"GO:0045694"(regulation of embryo sac egg cell differentiation)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0048437"(floral organ development)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:1990904"(ribonucleoprotein complex) - - - figure legend:Figure 7C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/20 2014/10/16 rogid:uHcCN21s+AzO0p8LWWv+97lPIBc3702 rogid:tSA+VSjQwcaP24HXjH3yD0pzmpc3702 intact-crc:F5D726F535E8A459|rigid:8ObtkBhn1tzZfSsBv90ij8BgIvs false sufficient binding region:1350-1816 - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9LNC5 uniprotkb:Q9SSD2 intact:EBI-2292267|ensemblplants:AT1G06220.1|ensemblplants:AT1G06220.2|ensemblplants:AT1G06220.3 intact:EBI-2270869|ensemblplants:AT1G80070.1 psi-mi:clo_arath(display_long)|uniprotkb:CLO(gene name)|psi-mi:CLO(display_short)|uniprotkb:GFA1(gene name synonym)|uniprotkb:MEE5(gene name synonym)|uniprotkb:Protein CLOTHO(gene name synonym)|uniprotkb:Protein GAMETOPHYTE FACTOR 1(gene name synonym)|uniprotkb:Protein MATERNAL EFFECT EMBRYO ARREST 5(gene name synonym)|uniprotkb:Protein VAJRA-1(gene name synonym)|uniprotkb:SNU114 homolog(gene name synonym)|uniprotkb:VAJ-1(gene name synonym)|uniprotkb:F9P14.8(orf name)|uniprotkb:At1g06220(locus name) psi-mi:prp8a_arath(display_long)|uniprotkb:PRP8A(gene name)|psi-mi:PRP8A(display_short)|uniprotkb:EMB14(gene name synonym)|uniprotkb:EMB177(gene name synonym)|uniprotkb:EMB33(gene name synonym)|uniprotkb:PRP8 homolog A(gene name synonym)|uniprotkb:Protein ABNORMAL SUSPENSOR 2(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 14(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 177(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 33(gene name synonym)|uniprotkb:Protein SUPPRESSOR OF OVEREXPRESSED FCA 81(gene name synonym)|uniprotkb:SOF81(gene name synonym)|uniprotkb:SUS2(gene name synonym)|uniprotkb:F18B13.15(orf name)|uniprotkb:At1g80070(locus name) psi-mi:"MI:0018"(two hybrid) Liu et al. (2009) pubmed:19261069|imex:IM-19475 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2292296|imex:IM-19475-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR031950|refseq:NP_172112.1|refseq:NP_849600.1|interpro:IPR000795(Protein synthesis factor, GTP-binding)|interpro:IPR020568|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR000640(Translation elongation factor EFG/EF2, C-terminal)|interpro:IPR005517(Translation elongation factor EFG/EF2, domain IV)|interpro:IPR004161(Translation elongation factor EFTu/EF1A, domain 2)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR044121|refseq:NP_001321282.1|interpro:IPR027417|interpro:IPR035647|interpro:IPR035655|ensemblplants:AT1G06220(gene)|ensemblplants:AT1G06220.1(transcript)|ensemblplants:AT1G06220.2(transcript)|ensemblplants:AT1G06220.3(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005618"(cell wall)|go:"GO:0005886"(plasma membrane)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0016607"(nuclear speck)|go:"GO:0030623"(U5 snRNA binding)|go:"GO:0045694"(regulation of embryo sac egg cell differentiation)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0048437"(floral organ development)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:1990904"(ribonucleoprotein complex) interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|refseq:NP_178124.2|interpro:IPR000555(Mov34/MPN/PAD-1)|interpro:IPR012591(PRO8NT)|interpro:IPR012984(PRO, C-terminal)|interpro:IPR012592(PROCN)|interpro:IPR021983|interpro:IPR019581|interpro:IPR019580|interpro:IPR019582|interpro:IPR027652|ensemblplants:AT1G80070(gene)|ensemblplants:AT1G80070.1(transcript)|go:"GO:0000244"(spliceosomal tri-snRNP complex assembly)|go:"GO:0000380"(alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005739"(mitochondrion)|go:"GO:0008237"(metallopeptidase activity)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0030619"(U1 snRNA binding)|go:"GO:0030620"(U2 snRNA binding)|go:"GO:0030623"(U5 snRNA binding)|go:"GO:0070122"(isopeptidase activity)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097157"(pre-mRNA intronic binding)|interpro:IPR037518|interpro:IPR042516|interpro:IPR043172|interpro:IPR043173 - - - figure legend:Figure 7C|caution:"The UniProt record for protein Q9SSD2 (At1g80070) has an amino acid length of 2359 whereas the TAIR protein for At1g80070 is 2382 amino acids in length. The difference occurs because of a 23 amino acid sequence missing in the UniProt record starting at amino acid 95. Note the authors state the At1g80070 protein is 2383 amino acids in length. The authors used the last 308 amino acids of the protein in the prey construct which is equivalent to amino acids 2051 - 2359 of the UniProt record. This is the region annotated in this entry."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/20 2014/10/16 rogid:tSA+VSjQwcaP24HXjH3yD0pzmpc3702 rogid:89MpmqrLzCWkjteDzuBdFvnf3Fw3702 intact-crc:DD8B45EB7A2C926F|rigid:Q7KGqJqpfzq96qlpBBj27hGijT4 false - sufficient binding region:2051-2359 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)