#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P25655 uniprotkb:Q02642 intact:EBI-12139|uniprotkb:D6VR93|ensemblfungi:YCR093W intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C psi-mi:not1_yeast(display_long)|uniprotkb:CDC39(gene name)|psi-mi:CDC39(display_short)|uniprotkb:NOT1(gene name synonym)|uniprotkb:ROS1(gene name synonym)|uniprotkb:YCR093W(locus name)|uniprotkb:YCR93W(orf name)|uniprotkb:YCR1151(orf name)|uniprotkb:Cell division cycle protein 39(gene name synonym) psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2271535|imex:IM-18933-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YCR093W(gene)|ensemblfungi:YCR093W_mRNA(transcript)|go:"GO:0000288"(nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:0000289"("nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0000749"(response to pheromone triggering conjugation with cellular fusion)|go:"GO:0000932"(P-body)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly)|interpro:IPR007196(CCR4-Not complex component, Not1)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR024557|interpro:IPR032191|interpro:IPR032193|interpro:IPR032194|interpro:IPR032195|interpro:IPR038535|interpro:IPR040398|rcsb pdb:4B89|rcsb pdb:4B8A|rcsb pdb:4B8B|rcsb pdb:4B8C|rcsb pdb:4BY6|rcsb pdb:4CV5|rcsb pdb:5AJD|refseq:NP_010017.2|sgd:S000000689|dip:DIP-1202N|mint:P25655 refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 - crc64:5B2AE15BCF95E009 crc64:7C278A3DC79BF95B figure legend:Figure 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:k2j2eOcKShGEaNVLDNiTdtYVqBI559292 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 intact-crc:0750EDF7DCDE10BC|rigid:v/BRNuDEO8OaAiu2xdfcWoSLS0M false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P15731 uniprotkb:Q02642 intact:EBI-19735|uniprotkb:D6VQ81|ensemblfungi:YBR082C intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C psi-mi:ubc4_yeast(display_long)|uniprotkb:UBC4(gene name)|psi-mi:UBC4(display_short)|uniprotkb:YBR082C(locus name)|uniprotkb:YBR0745(orf name)|uniprotkb:Ubiquitin-protein ligase 4(gene name synonym)|uniprotkb:Ubiquitin carrier protein 4(gene name synonym)|uniprotkb:E2 ubiquitin-conjugating enzyme 4(gene name synonym) psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2271772|imex:IM-18933-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009638.1|sgd:S000000286|ensemblfungi:YBR082C(gene)|ensemblfungi:YBR082C_mRNA(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0006513"(protein monoubiquitination)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0034605"(cellular response to heat)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043162"(ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway)|go:"GO:0061631"(ubiquitin conjugating enzyme activity)|go:"GO:0070628"(proteasome binding)|go:"GO:0071629"(cytoplasm protein quality control by the ubiquitin-proteasome system)|go:"GO:1990116"(ribosome-associated ubiquitin-dependent protein catabolic process)|interpro:IPR000608(Ubiquitin-conjugating enzyme, E2)|interpro:IPR016135(Ubiquitin-conjugating enzyme/RWD-like)|interpro:IPR023313|rcsb pdb:1QCQ|rcsb pdb:5AIE|reactome:R-SCE-8866652|reactome:R-SCE-8866654|reactome:R-SCE-9033241|reactome:R-SCE-983168|go:"GO:0072671"(mitochondria-associated ubiquitin-dependent protein catabolic process)|dip:DIP-6596N|mint:P15731 refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 - crc64:8E96137D3EB20F80 crc64:7C278A3DC79BF95B figure legend:Figure 3a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:MCFIl+wHw5tAv9OvK57xg0aZBx4559292 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 intact-crc:7E3691BB17CBA56B|rigid:bfqPxRTYQzBWNSt5m2Dr7Coj+H8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02642 uniprotkb:P15732 intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C intact:EBI-2097669|uniprotkb:D6VS45|ensemblfungi:YDR059C psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:ubc5_yeast(display_long)|uniprotkb:UBC5(gene name)|psi-mi:UBC5(display_short)|uniprotkb:Ubiquitin-protein ligase(gene name synonym)|uniprotkb:Ubiquitin carrier protein(gene name synonym)|uniprotkb:YD9609.13C(orf name)|uniprotkb:D4234(orf name)|uniprotkb:YDR059C(locus name)|uniprotkb:E2 ubiquitin-conjugating enzyme 5(gene name synonym) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2271787|imex:IM-18933-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 refseq:NP_010344.1|sgd:S000002466|interpro:IPR000608(Ubiquitin-conjugating enzyme, E2)|interpro:IPR023313|interpro:IPR016135(Ubiquitin-conjugating enzyme/RWD-like)|mint:P15732|ensemblfungi:YDR059C(gene)|ensemblfungi:YDR059C_mRNA(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0034605"(cellular response to heat)|go:"GO:0061631"(ubiquitin conjugating enzyme activity)|go:"GO:0070628"(proteasome binding)|reactome:R-SCE-8866652|reactome:R-SCE-8866654|reactome:R-SCE-9033241|reactome:R-SCE-983168 - crc64:7C278A3DC79BF95B - figure legend:Figure 3a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 rogid:lhkS9orGIZV1O+L0mEfzlpRvgtk559292 intact-crc:1042FF4A089DD632|rigid:3LL/s7urmCMWxpTBMBwhCt4mKwg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02642 uniprotkb:Q02642 intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2271933|imex:IM-18933-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 - crc64:7C278A3DC79BF95B crc64:7C278A3DC79BF95B figure legend:figure 4c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 intact-crc:0030D17EB9CE067B|rigid:wHZhg5QZf/cZTb+7FDQ3nvNiPGU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02642 uniprotkb:P06100 intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C intact:EBI-12153|uniprotkb:D6VRI6|ensemblfungi:YDL165W psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:not2_yeast(display_long)|uniprotkb:CDC36(gene name)|psi-mi:CDC36(display_short)|uniprotkb:DNA19(gene name synonym)|uniprotkb:NOT2(gene name synonym)|uniprotkb:YDL165W(locus name)|uniprotkb:cell division cycle protein 36(gene name synonym) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2272388|imex:IM-18933-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 ensemblfungi:YDL165W(gene)|ensemblfungi:YDL165W_mRNA(transcript)|go:"GO:0000288"(nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:0000289"("nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000749"(response to pheromone triggering conjugation with cellular fusion)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0051726"(regulation of cell cycle)|interpro:IPR007282(NOT2/NOT3/NOT5)|interpro:IPR038635|interpro:IPR040168|rcsb pdb:4BY6|refseq:NP_010116.1|sgd:S000002324|dip:DIP-590N|mint:P06100 - crc64:7C278A3DC79BF95B crc64:7D0B69657F791371 figure legend:Figure 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 rogid:bOgpnRcqWbxkhHJg140qzPxIBJQ559292 intact-crc:D1552F7CE845DBFA|rigid:uFBDHNi5zoIA3YPlQbnvX/ncRqY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02642 uniprotkb:P06102 intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C intact:EBI-12165|uniprotkb:D6VVP4|uniprotkb:Q6B233|ensemblfungi:YIL038C psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:not3_yeast(display_long)|uniprotkb:NOT3(gene name)|psi-mi:NOT3(display_short)|uniprotkb:YIL038C(locus name) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2272393|imex:IM-18933-9 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 interpro:IPR007207(Not CCR4-Not complex component, N-terminal)|interpro:IPR007282(NOT2/NOT3/NOT5)|interpro:IPR012270(CCR4-NOT complex, subunits 3 and 5)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|interpro:IPR038635|interpro:IPR040168|ensemblfungi:YIL038C(gene)|ensemblfungi:YIL038C_mRNA(transcript)|go:"GO:0000289"("nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030015"(CCR4-NOT core complex)|refseq:NP_012226.3|sgd:S000001300|dip:DIP-2256N|mint:P06102 - crc64:7C278A3DC79BF95B crc64:69B76694FCC6846F figure legend:Figure 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 rogid:EfakZPDNU3FZeI5+rnu7YV1UsCg559292 intact-crc:E929F3BE0891CDED|rigid:dwedoGah8o44rjmLSennyUArlSU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02642 uniprotkb:P34909 intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C intact:EBI-12174|uniprotkb:D3DLX3|ensemblfungi:YER068W psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:not4_yeast(display_long)|uniprotkb:MOT2(gene name)|psi-mi:MOT2(display_short)|uniprotkb:CCL1(gene name synonym)|uniprotkb:NOT4(gene name synonym)|uniprotkb:SIG1(gene name synonym)|uniprotkb:SSF1(gene name synonym)|uniprotkb:Modulator of transcription 2(gene name synonym)|uniprotkb:YER068W(locus name) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2272398|imex:IM-18933-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 ensemblfungi:YER068W(gene)|ensemblfungi:YER068W_mRNA(transcript)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0003723"(RNA binding)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0010498"(proteasomal protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0046872"(metal ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR034261|interpro:IPR035979|interpro:IPR039515|interpro:IPR039780|rcsb pdb:5AIE|rcsb pdb:5AJD|refseq:NP_010991.3|sgd:S000000870|dip:DIP-2255N|mint:P34909 - crc64:7C278A3DC79BF95B crc64:8847084BD9BF48B7 figure legend:Figure 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 rogid:TLt8Wu8+ygYk/0dtfXHhnCITKqc559292 intact-crc:E4471D2DA8EA7BBE|rigid:SFfhxpjGQk//ceSnvCB0BpRlUIA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12514 uniprotkb:Q02642 intact:EBI-12184|uniprotkb:D6W476|ensemblfungi:YPR072W intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C psi-mi:not5_yeast(display_long)|uniprotkb:NOT5(gene name)|psi-mi:NOT5(display_short)|uniprotkb:YP9499.27(orf name)|uniprotkb:YPR072W(locus name) psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2272403|imex:IM-18933-11 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPR072W(gene)|go:"GO:0000289"("nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|interpro:IPR007207(Not CCR4-Not complex component, N-terminal)|interpro:IPR007282(NOT2/NOT3/NOT5)|interpro:IPR012270(CCR4-NOT complex, subunits 3 and 5)|interpro:IPR038635|interpro:IPR040168|rcsb pdb:4BY6|rcsb pdb:6TB3|ensemblfungi:YPR072W_mRNA(transcript)|refseq:NP_015397.1|sgd:S000006276|dip:DIP-2257N|mint:Q12514 refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 - crc64:073137119B3E92BC crc64:7C278A3DC79BF95B figure legend:Figure 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:+XON8Ps4xCFhw058U9d2voUy2dc559292 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 intact-crc:7AA0B04D2133F00B|rigid:Na6trhTiW+v9e0VpBLJX/ZS9NnM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02642 uniprotkb:P39008 intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C intact:EBI-13629|uniprotkb:D6W1M7|ensemblfungi:YNR052C psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:pop2_yeast(display_long)|uniprotkb:POP2(gene name)|psi-mi:POP2(display_short)|uniprotkb:CAF1(gene name synonym)|uniprotkb:YNR052C(locus name)|uniprotkb:N3470(orf name)|uniprotkb:CCR4-associated factor 1(gene name synonym) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2272408|imex:IM-18933-12 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 sgd:S000005335|ensemblfungi:YNR052C(gene)|ensemblfungi:YNR052C_mRNA(transcript)|go:"GO:0000175"(3'-5'-exoribonuclease activity)|go:"GO:0000289"("nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0000932"(P-body)|go:"GO:0003723"(RNA binding)|go:"GO:0004535"("poly(A)-specific ribonuclease activity")|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0043332"(mating projection tip)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0046872"(metal ion binding)|interpro:IPR006941(Ribonuclease CAF1)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR036397|interpro:IPR039637|rcsb pdb:1UOC|rcsb pdb:4B8A|rcsb pdb:4B8C|refseq:NP_014450.3|mint:P39008|dip:DIP-1957N - crc64:7C278A3DC79BF95B crc64:F3CAF97106A65933 figure legend:Figure 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 rogid:9MOxi5VbfC199pktTp/lOroQiSA559292 intact-crc:95F29BE4F14E6CBD|rigid:JPBoSTSoKYValTjHO7b6UV/chj0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53829 uniprotkb:Q02642 intact:EBI-28306|uniprotkb:D6W0Q5|ensemblfungi:YNL288W intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C psi-mi:caf40_yeast(display_long)|uniprotkb:YNL288W(locus name)|uniprotkb:N0540(orf name)|uniprotkb:40 kDa CCR4-associated factor(gene name synonym)|uniprotkb:CAF40(gene name)|psi-mi:CAF40(display_short) psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2272413|imex:IM-18933-13 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014111.1|sgd:S000005232|dip:DIP-1995N|mint:P53829|ensemblfungi:YNL288W(gene)|ensemblfungi:YNL288W_mRNA(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|interpro:IPR007216(Cell differentiation, Rcd1-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|rcsb pdb:4CV5 refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 - crc64:F3DBABE6AD3C7F3C crc64:7C278A3DC79BF95B figure legend:Figure 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:etuSSgFGQOcgxPDexEXUqQg6H5s559292 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 intact-crc:DD4608E2C7E59CD4|rigid:sIDyL8YDMasijdizZHGPzDOR0qU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P31384 uniprotkb:Q02642 intact:EBI-4396|uniprotkb:D6VPJ7|ensemblfungi:YAL021C intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C psi-mi:ccr4_yeast(display_long)|uniprotkb:CCR4(gene name)|psi-mi:CCR4(display_short)|uniprotkb:Carbon catabolite repressor protein 4(gene name synonym)|uniprotkb:Cytoplasmic deadenylase(gene name synonym)|uniprotkb:Glucose-repressible alcohol dehydrogenase transcriptional effector(gene name synonym)|uniprotkb:FUN27(orf name)|uniprotkb:YAL021C(locus name) psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2272418|imex:IM-18933-14 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009381.1|sgd:S000000019|dip:DIP-2522N|mint:P31384|ensemblfungi:YAL021C(gene)|ensemblfungi:YAL021C_mRNA(transcript)|go:"GO:0000076"(DNA replication checkpoint signaling)|go:"GO:0000175"(3'-5'-exoribonuclease activity)|go:"GO:0000288"(nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:0000289"("nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0000932"(P-body)|go:"GO:0003723"(RNA binding)|go:"GO:0004535"("poly(A)-specific ribonuclease activity")|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006260"(DNA replication)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0007089"(traversing start control point of mitotic cell cycle)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0046872"(metal ion binding)|go:"GO:0048478"(replication fork protection)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR003591(Leucine-rich repeat, typical subtype)|interpro:IPR005135(Endonuclease/exonuclease/phosphatase)|interpro:IPR025875|interpro:IPR032675|interpro:IPR036691|rcsb pdb:4B8C refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 - crc64:5CDB2E8FEDDBEF6F crc64:7C278A3DC79BF95B figure legend:Figure 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:f5gxp32WdxKuHQnE8O9/EhhA3Gw559292 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 intact-crc:1EC3E2FAF9E5D3AA|rigid:DdNlQR7SI3L1u8fsDYc5Cw/V9S8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P15731 uniprotkb:P38879 intact:EBI-19735|uniprotkb:D6VQ81|ensemblfungi:YBR082C intact:EBI-6379|uniprotkb:D3DLE1|ensemblfungi:YHR193C psi-mi:ubc4_yeast(display_long)|uniprotkb:UBC4(gene name)|psi-mi:UBC4(display_short)|uniprotkb:YBR082C(locus name)|uniprotkb:YBR0745(orf name)|uniprotkb:Ubiquitin-protein ligase 4(gene name synonym)|uniprotkb:Ubiquitin carrier protein 4(gene name synonym)|uniprotkb:E2 ubiquitin-conjugating enzyme 4(gene name synonym) psi-mi:naca_yeast(display_long)|uniprotkb:EGD2(gene name)|psi-mi:EGD2(display_short)|uniprotkb:Alpha-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 2(gene name synonym)|uniprotkb:YHR193C(locus name) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2272430|imex:IM-18933-15 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009638.1|sgd:S000000286|ensemblfungi:YBR082C(gene)|ensemblfungi:YBR082C_mRNA(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0006513"(protein monoubiquitination)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0034605"(cellular response to heat)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043162"(ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway)|go:"GO:0061631"(ubiquitin conjugating enzyme activity)|go:"GO:0070628"(proteasome binding)|go:"GO:0071629"(cytoplasm protein quality control by the ubiquitin-proteasome system)|go:"GO:1990116"(ribosome-associated ubiquitin-dependent protein catabolic process)|interpro:IPR000608(Ubiquitin-conjugating enzyme, E2)|interpro:IPR016135(Ubiquitin-conjugating enzyme/RWD-like)|interpro:IPR023313|rcsb pdb:1QCQ|rcsb pdb:5AIE|reactome:R-SCE-8866652|reactome:R-SCE-8866654|reactome:R-SCE-9033241|reactome:R-SCE-983168|go:"GO:0072671"(mitochondria-associated ubiquitin-dependent protein catabolic process)|dip:DIP-6596N|mint:P15731 sgd:S000001236|refseq:NP_012063.3|mint:P38879|dip:DIP-2098N|ensemblfungi:YHR193C(gene)|ensemblfungi:YHR193C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006612"(protein targeting to membrane)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0070273"(phosphatidylinositol-4-phosphate binding)|go:"GO:0070300"(phosphatidic acid binding)|go:"GO:0080025"(phosphatidylinositol-3,5-bisphosphate binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR009060(UBA-like)|interpro:IPR016641(Nascent polypeptide-associated complex, alpha subunit)|interpro:IPR038187|interpro:IPR044034 - crc64:8E96137D3EB20F80 crc64:86CE0C4E6194C286 figure legend:Figure 3a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:MCFIl+wHw5tAv9OvK57xg0aZBx4559292 rogid:IjsgR+hZDgTQDvy2Wf8JEX4kF+A559292 intact-crc:91299FDF22017262|rigid:OMxL7xVu4mfDT2HFeWUNS4LGjfc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P34909 uniprotkb:P15731 intact:EBI-12174|uniprotkb:D3DLX3|ensemblfungi:YER068W intact:EBI-19735|uniprotkb:D6VQ81|ensemblfungi:YBR082C psi-mi:not4_yeast(display_long)|uniprotkb:MOT2(gene name)|psi-mi:MOT2(display_short)|uniprotkb:CCL1(gene name synonym)|uniprotkb:NOT4(gene name synonym)|uniprotkb:SIG1(gene name synonym)|uniprotkb:SSF1(gene name synonym)|uniprotkb:Modulator of transcription 2(gene name synonym)|uniprotkb:YER068W(locus name) psi-mi:ubc4_yeast(display_long)|uniprotkb:UBC4(gene name)|psi-mi:UBC4(display_short)|uniprotkb:YBR082C(locus name)|uniprotkb:YBR0745(orf name)|uniprotkb:Ubiquitin-protein ligase 4(gene name synonym)|uniprotkb:Ubiquitin carrier protein 4(gene name synonym)|uniprotkb:E2 ubiquitin-conjugating enzyme 4(gene name synonym) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2272435|imex:IM-18933-16 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YER068W(gene)|ensemblfungi:YER068W_mRNA(transcript)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0003723"(RNA binding)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0010498"(proteasomal protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0046872"(metal ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR034261|interpro:IPR035979|interpro:IPR039515|interpro:IPR039780|rcsb pdb:5AIE|rcsb pdb:5AJD|refseq:NP_010991.3|sgd:S000000870|dip:DIP-2255N|mint:P34909 refseq:NP_009638.1|sgd:S000000286|ensemblfungi:YBR082C(gene)|ensemblfungi:YBR082C_mRNA(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0006513"(protein monoubiquitination)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0034605"(cellular response to heat)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043162"(ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway)|go:"GO:0061631"(ubiquitin conjugating enzyme activity)|go:"GO:0070628"(proteasome binding)|go:"GO:0071629"(cytoplasm protein quality control by the ubiquitin-proteasome system)|go:"GO:1990116"(ribosome-associated ubiquitin-dependent protein catabolic process)|interpro:IPR000608(Ubiquitin-conjugating enzyme, E2)|interpro:IPR016135(Ubiquitin-conjugating enzyme/RWD-like)|interpro:IPR023313|rcsb pdb:1QCQ|rcsb pdb:5AIE|reactome:R-SCE-8866652|reactome:R-SCE-8866654|reactome:R-SCE-9033241|reactome:R-SCE-983168|go:"GO:0072671"(mitochondria-associated ubiquitin-dependent protein catabolic process)|dip:DIP-6596N|mint:P15731 - crc64:8847084BD9BF48B7 crc64:8E96137D3EB20F80 figure legend:Figure 3a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:TLt8Wu8+ygYk/0dtfXHhnCITKqc559292 rogid:MCFIl+wHw5tAv9OvK57xg0aZBx4559292 intact-crc:58E80A596C4B6301|rigid:Xq4gfpgmSEd3BddDlg4AQt3ZVew false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38879 uniprotkb:Q02642 intact:EBI-6379|uniprotkb:D3DLE1|ensemblfungi:YHR193C intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C psi-mi:naca_yeast(display_long)|uniprotkb:EGD2(gene name)|psi-mi:EGD2(display_short)|uniprotkb:Alpha-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 2(gene name synonym)|uniprotkb:YHR193C(locus name) psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2272441|imex:IM-18933-17 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001236|refseq:NP_012063.3|mint:P38879|dip:DIP-2098N|ensemblfungi:YHR193C(gene)|ensemblfungi:YHR193C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006612"(protein targeting to membrane)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0070273"(phosphatidylinositol-4-phosphate binding)|go:"GO:0070300"(phosphatidic acid binding)|go:"GO:0080025"(phosphatidylinositol-3,5-bisphosphate binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR009060(UBA-like)|interpro:IPR016641(Nascent polypeptide-associated complex, alpha subunit)|interpro:IPR038187|interpro:IPR044034 refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 - crc64:86CE0C4E6194C286 crc64:7C278A3DC79BF95B figure legend:figures 1A and 4c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:IjsgR+hZDgTQDvy2Wf8JEX4kF+A559292 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 intact-crc:4C53DCD7F5A51FC0|rigid:r+H3daMHfmHyBLVvCZ+foZIrTQE false sufficient binding region:1-136 - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38879 uniprotkb:P15732 intact:EBI-6379|uniprotkb:D3DLE1|ensemblfungi:YHR193C intact:EBI-2097669|uniprotkb:D6VS45|ensemblfungi:YDR059C psi-mi:naca_yeast(display_long)|uniprotkb:EGD2(gene name)|psi-mi:EGD2(display_short)|uniprotkb:Alpha-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 2(gene name synonym)|uniprotkb:YHR193C(locus name) psi-mi:ubc5_yeast(display_long)|uniprotkb:UBC5(gene name)|psi-mi:UBC5(display_short)|uniprotkb:Ubiquitin-protein ligase(gene name synonym)|uniprotkb:Ubiquitin carrier protein(gene name synonym)|uniprotkb:YD9609.13C(orf name)|uniprotkb:D4234(orf name)|uniprotkb:YDR059C(locus name)|uniprotkb:E2 ubiquitin-conjugating enzyme 5(gene name synonym) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2272446|imex:IM-18933-18 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001236|refseq:NP_012063.3|mint:P38879|dip:DIP-2098N|ensemblfungi:YHR193C(gene)|ensemblfungi:YHR193C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006612"(protein targeting to membrane)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0070273"(phosphatidylinositol-4-phosphate binding)|go:"GO:0070300"(phosphatidic acid binding)|go:"GO:0080025"(phosphatidylinositol-3,5-bisphosphate binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR009060(UBA-like)|interpro:IPR016641(Nascent polypeptide-associated complex, alpha subunit)|interpro:IPR038187|interpro:IPR044034 refseq:NP_010344.1|sgd:S000002466|interpro:IPR000608(Ubiquitin-conjugating enzyme, E2)|interpro:IPR023313|interpro:IPR016135(Ubiquitin-conjugating enzyme/RWD-like)|mint:P15732|ensemblfungi:YDR059C(gene)|ensemblfungi:YDR059C_mRNA(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0034605"(cellular response to heat)|go:"GO:0061631"(ubiquitin conjugating enzyme activity)|go:"GO:0070628"(proteasome binding)|reactome:R-SCE-8866652|reactome:R-SCE-8866654|reactome:R-SCE-9033241|reactome:R-SCE-983168 - crc64:86CE0C4E6194C286 - figure legend:Figure 3a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:IjsgR+hZDgTQDvy2Wf8JEX4kF+A559292 rogid:lhkS9orGIZV1O+L0mEfzlpRvgtk559292 intact-crc:FF5DF12E3D57013B|rigid:Zk0VG/buFT/1pcnX9+5HsnnL4iI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P15732 uniprotkb:P34909 intact:EBI-2097669|uniprotkb:D6VS45|ensemblfungi:YDR059C intact:EBI-12174|uniprotkb:D3DLX3|ensemblfungi:YER068W psi-mi:ubc5_yeast(display_long)|uniprotkb:UBC5(gene name)|psi-mi:UBC5(display_short)|uniprotkb:Ubiquitin-protein ligase(gene name synonym)|uniprotkb:Ubiquitin carrier protein(gene name synonym)|uniprotkb:YD9609.13C(orf name)|uniprotkb:D4234(orf name)|uniprotkb:YDR059C(locus name)|uniprotkb:E2 ubiquitin-conjugating enzyme 5(gene name synonym) psi-mi:not4_yeast(display_long)|uniprotkb:MOT2(gene name)|psi-mi:MOT2(display_short)|uniprotkb:CCL1(gene name synonym)|uniprotkb:NOT4(gene name synonym)|uniprotkb:SIG1(gene name synonym)|uniprotkb:SSF1(gene name synonym)|uniprotkb:Modulator of transcription 2(gene name synonym)|uniprotkb:YER068W(locus name) psi-mi:"MI:0018"(two hybrid) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2272451|imex:IM-18933-19 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010344.1|sgd:S000002466|interpro:IPR000608(Ubiquitin-conjugating enzyme, E2)|interpro:IPR023313|interpro:IPR016135(Ubiquitin-conjugating enzyme/RWD-like)|mint:P15732|ensemblfungi:YDR059C(gene)|ensemblfungi:YDR059C_mRNA(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0034605"(cellular response to heat)|go:"GO:0061631"(ubiquitin conjugating enzyme activity)|go:"GO:0070628"(proteasome binding)|reactome:R-SCE-8866652|reactome:R-SCE-8866654|reactome:R-SCE-9033241|reactome:R-SCE-983168 ensemblfungi:YER068W(gene)|ensemblfungi:YER068W_mRNA(transcript)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0003723"(RNA binding)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0010498"(proteasomal protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0046872"(metal ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR034261|interpro:IPR035979|interpro:IPR039515|interpro:IPR039780|rcsb pdb:5AIE|rcsb pdb:5AJD|refseq:NP_010991.3|sgd:S000000870|dip:DIP-2255N|mint:P34909 - - crc64:8847084BD9BF48B7 figure legend:Figure 3a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:lhkS9orGIZV1O+L0mEfzlpRvgtk559292 rogid:TLt8Wu8+ygYk/0dtfXHhnCITKqc559292 intact-crc:369C64A8731D1058|rigid:NEB/+p5ByK/3coJQLicBRK7BotE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38879 uniprotkb:Q02642 intact:EBI-6379|uniprotkb:D3DLE1|ensemblfungi:YHR193C intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C psi-mi:naca_yeast(display_long)|uniprotkb:EGD2(gene name)|psi-mi:EGD2(display_short)|uniprotkb:Alpha-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 2(gene name synonym)|uniprotkb:YHR193C(locus name) psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:"MI:0415"(enzymatic study) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0220"(ubiquitination reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2271901|imex:IM-18933-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001236|refseq:NP_012063.3|mint:P38879|dip:DIP-2098N|ensemblfungi:YHR193C(gene)|ensemblfungi:YHR193C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006612"(protein targeting to membrane)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0070273"(phosphatidylinositol-4-phosphate binding)|go:"GO:0070300"(phosphatidic acid binding)|go:"GO:0080025"(phosphatidylinositol-3,5-bisphosphate binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR009060(UBA-like)|interpro:IPR016641(Nascent polypeptide-associated complex, alpha subunit)|interpro:IPR038187|interpro:IPR044034 refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 go:"GO:0016567"(protein ubiquitination) crc64:86CE0C4E6194C286 crc64:7C278A3DC79BF95B figure legend:Figure 3b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2009/03/11 2014/10/16 rogid:IjsgR+hZDgTQDvy2Wf8JEX4kF+A559292 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 intact-crc:F785CBA054CF096D|rigid:y4C2jvuH+oBhBu36+j8tSSwFv0M false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38879 uniprotkb:P34909 intact:EBI-6379|uniprotkb:D3DLE1|ensemblfungi:YHR193C intact:EBI-12174|uniprotkb:D3DLX3|ensemblfungi:YER068W psi-mi:naca_yeast(display_long)|uniprotkb:EGD2(gene name)|psi-mi:EGD2(display_short)|uniprotkb:Alpha-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 2(gene name synonym)|uniprotkb:YHR193C(locus name) psi-mi:not4_yeast(display_long)|uniprotkb:MOT2(gene name)|psi-mi:MOT2(display_short)|uniprotkb:CCL1(gene name synonym)|uniprotkb:NOT4(gene name synonym)|uniprotkb:SIG1(gene name synonym)|uniprotkb:SSF1(gene name synonym)|uniprotkb:Modulator of transcription 2(gene name synonym)|uniprotkb:YER068W(locus name) psi-mi:"MI:0415"(enzymatic study) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0220"(ubiquitination reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2271901|imex:IM-18933-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001236|refseq:NP_012063.3|mint:P38879|dip:DIP-2098N|ensemblfungi:YHR193C(gene)|ensemblfungi:YHR193C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006612"(protein targeting to membrane)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0070273"(phosphatidylinositol-4-phosphate binding)|go:"GO:0070300"(phosphatidic acid binding)|go:"GO:0080025"(phosphatidylinositol-3,5-bisphosphate binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR009060(UBA-like)|interpro:IPR016641(Nascent polypeptide-associated complex, alpha subunit)|interpro:IPR038187|interpro:IPR044034 ensemblfungi:YER068W(gene)|ensemblfungi:YER068W_mRNA(transcript)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0003723"(RNA binding)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0010498"(proteasomal protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0046872"(metal ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR034261|interpro:IPR035979|interpro:IPR039515|interpro:IPR039780|rcsb pdb:5AIE|rcsb pdb:5AJD|refseq:NP_010991.3|sgd:S000000870|dip:DIP-2255N|mint:P34909 go:"GO:0016567"(protein ubiquitination) crc64:86CE0C4E6194C286 crc64:8847084BD9BF48B7 figure legend:Figure 3b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2009/03/11 2014/10/16 rogid:IjsgR+hZDgTQDvy2Wf8JEX4kF+A559292 rogid:TLt8Wu8+ygYk/0dtfXHhnCITKqc559292 intact-crc:F785CBA054CF096D|rigid:y4C2jvuH+oBhBu36+j8tSSwFv0M false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38879 uniprotkb:P22515 intact:EBI-6379|uniprotkb:D3DLE1|ensemblfungi:YHR193C intact:EBI-19703|uniprotkb:D6VWZ3|ensemblfungi:YKL210W psi-mi:naca_yeast(display_long)|uniprotkb:EGD2(gene name)|psi-mi:EGD2(display_short)|uniprotkb:Alpha-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 2(gene name synonym)|uniprotkb:YHR193C(locus name) psi-mi:uba1_yeast(display_long)|uniprotkb:UBA1(gene name)|psi-mi:UBA1(display_short)|uniprotkb:YKL210W(locus name) psi-mi:"MI:0415"(enzymatic study) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0220"(ubiquitination reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2271901|imex:IM-18933-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001236|refseq:NP_012063.3|mint:P38879|dip:DIP-2098N|ensemblfungi:YHR193C(gene)|ensemblfungi:YHR193C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006612"(protein targeting to membrane)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0070273"(phosphatidylinositol-4-phosphate binding)|go:"GO:0070300"(phosphatidic acid binding)|go:"GO:0080025"(phosphatidylinositol-3,5-bisphosphate binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR009060(UBA-like)|interpro:IPR016641(Nascent polypeptide-associated complex, alpha subunit)|interpro:IPR038187|interpro:IPR044034 refseq:NP_012712.1|sgd:S000001693|ensemblfungi:YKL210W(gene)|ensemblfungi:YKL210W_mRNA(transcript)|go:"GO:0004839"(ubiquitin activating enzyme activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0032446"(protein modification by small protein conjugation)|interpro:IPR000011(Ubiquitin-activating enzyme, E1)|interpro:IPR000594(UBA/THIF-type NAD/FAD binding fold)|interpro:IPR018074|interpro:IPR018075|interpro:IPR018965|interpro:IPR019572|interpro:IPR032418|interpro:IPR032420|interpro:IPR033127|interpro:IPR035985|interpro:IPR038252|interpro:IPR042063|interpro:IPR042302|interpro:IPR042449|rcsb pdb:3CMM|rcsb pdb:4NNJ|rcsb pdb:5L6H|rcsb pdb:5L6I|rcsb pdb:5L6J|rcsb pdb:5TR4|rcsb pdb:6NYA|rcsb pdb:6ZQH|rcsb pdb:7K5J|reactome:R-SCE-1169408|reactome:R-SCE-8866652|reactome:R-SCE-983168|dip:DIP-4853N|mint:P22515 go:"GO:0016567"(protein ubiquitination) crc64:86CE0C4E6194C286 crc64:8910804DF9156661 figure legend:Figure 3b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2009/03/11 2014/10/16 rogid:IjsgR+hZDgTQDvy2Wf8JEX4kF+A559292 rogid:5LkbO/GWqGTyuGWZG6biTGdbYII559292 intact-crc:F785CBA054CF096D|rigid:y4C2jvuH+oBhBu36+j8tSSwFv0M false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38879 uniprotkb:P15731 intact:EBI-6379|uniprotkb:D3DLE1|ensemblfungi:YHR193C intact:EBI-19735|uniprotkb:D6VQ81|ensemblfungi:YBR082C psi-mi:naca_yeast(display_long)|uniprotkb:EGD2(gene name)|psi-mi:EGD2(display_short)|uniprotkb:Alpha-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 2(gene name synonym)|uniprotkb:YHR193C(locus name) psi-mi:ubc4_yeast(display_long)|uniprotkb:UBC4(gene name)|psi-mi:UBC4(display_short)|uniprotkb:YBR082C(locus name)|uniprotkb:YBR0745(orf name)|uniprotkb:Ubiquitin-protein ligase 4(gene name synonym)|uniprotkb:Ubiquitin carrier protein 4(gene name synonym)|uniprotkb:E2 ubiquitin-conjugating enzyme 4(gene name synonym) psi-mi:"MI:0415"(enzymatic study) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0220"(ubiquitination reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2271901|imex:IM-18933-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001236|refseq:NP_012063.3|mint:P38879|dip:DIP-2098N|ensemblfungi:YHR193C(gene)|ensemblfungi:YHR193C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006612"(protein targeting to membrane)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0070273"(phosphatidylinositol-4-phosphate binding)|go:"GO:0070300"(phosphatidic acid binding)|go:"GO:0080025"(phosphatidylinositol-3,5-bisphosphate binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR009060(UBA-like)|interpro:IPR016641(Nascent polypeptide-associated complex, alpha subunit)|interpro:IPR038187|interpro:IPR044034 refseq:NP_009638.1|sgd:S000000286|ensemblfungi:YBR082C(gene)|ensemblfungi:YBR082C_mRNA(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0006513"(protein monoubiquitination)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0034605"(cellular response to heat)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043162"(ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway)|go:"GO:0061631"(ubiquitin conjugating enzyme activity)|go:"GO:0070628"(proteasome binding)|go:"GO:0071629"(cytoplasm protein quality control by the ubiquitin-proteasome system)|go:"GO:1990116"(ribosome-associated ubiquitin-dependent protein catabolic process)|interpro:IPR000608(Ubiquitin-conjugating enzyme, E2)|interpro:IPR016135(Ubiquitin-conjugating enzyme/RWD-like)|interpro:IPR023313|rcsb pdb:1QCQ|rcsb pdb:5AIE|reactome:R-SCE-8866652|reactome:R-SCE-8866654|reactome:R-SCE-9033241|reactome:R-SCE-983168|go:"GO:0072671"(mitochondria-associated ubiquitin-dependent protein catabolic process)|dip:DIP-6596N|mint:P15731 go:"GO:0016567"(protein ubiquitination) crc64:86CE0C4E6194C286 crc64:8E96137D3EB20F80 figure legend:Figure 3b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2009/03/11 2014/10/16 rogid:IjsgR+hZDgTQDvy2Wf8JEX4kF+A559292 rogid:MCFIl+wHw5tAv9OvK57xg0aZBx4559292 intact-crc:F785CBA054CF096D|rigid:y4C2jvuH+oBhBu36+j8tSSwFv0M false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38879 intact:EBI-19797 intact:EBI-6379|uniprotkb:D3DLE1|ensemblfungi:YHR193C dip:DIP-1549N|uniprotkb:P04838|uniprotkb:Q6LA96 psi-mi:naca_yeast(display_long)|uniprotkb:EGD2(gene name)|psi-mi:EGD2(display_short)|uniprotkb:Alpha-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 2(gene name synonym)|uniprotkb:YHR193C(locus name) psi-mi:ubiq_yeast(display_short)|psi-mi:EBI-19797(display_long)|uniprotkb:UBI1(gene name)|psi-mi:UBI1(display_short)|uniprotkb:RPL40A(gene name synonym)|uniprotkb:YIL148W(locus name)|uniprotkb:UBI2(gene name)|psi-mi:UBI2(display_short)|uniprotkb:RPL40B(gene name synonym)|uniprotkb:YKR094C(locus name)|uniprotkb:UBI3(gene name)|psi-mi:UBI3(display_short)|uniprotkb:RPS31(gene name synonym)|uniprotkb:YLR167W(locus name)|uniprotkb:L9470.14(orf name)|uniprotkb:UBI4(gene name)|psi-mi:UBI4(display_short)|uniprotkb:SCD2(gene name synonym)|uniprotkb:YLL039C(locus name) psi-mi:"MI:0415"(enzymatic study) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") psi-mi:"MI:0220"(ubiquitination reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2271901|imex:IM-18933-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001236|refseq:NP_012063.3|mint:P38879|dip:DIP-2098N|ensemblfungi:YHR193C(gene)|ensemblfungi:YHR193C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006612"(protein targeting to membrane)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0070273"(phosphatidylinositol-4-phosphate binding)|go:"GO:0070300"(phosphatidic acid binding)|go:"GO:0080025"(phosphatidylinositol-3,5-bisphosphate binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR009060(UBA-like)|interpro:IPR016641(Nascent polypeptide-associated complex, alpha subunit)|interpro:IPR038187|interpro:IPR044034 sgd:S000001410(RPL40A)|sgd:S000001802(RPL40B)|sgd:S000004157(RPS31)|sgd:S000003962(UBI4)|uniprotkb:P61864(see-also)|refseq:NP_012118.1|refseq:NP_013020.1|refseq:NP_013061.1|refseq:NP_013268.1|ensembl:YIL148W|ensembl:YKR094C|ensembl:YLR167W|go:"GO:0005515"(protein binding)|interpro:IPR000626(Ubiquitin)|cygd:YLR167w|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0005739"(mitochondrion)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0006412"(translation)|ensembl:YLL039C|rcsb pdb:1OTR|rcsb pdb:1Q0W|rcsb pdb:1WR1|rcsb pdb:1ZW7|rcsb pdb:2G3Q|go:"GO:0005634"(nucleus)|go:"GO:0006281"(DNA repair)|cygd:YIL148w|cygd:YKR094c|cygd:YLL039c|rcsb pdb:2JT4|rcsb pdb:2JWZ|rcsb pdb:3CMM|interpro:IPR019954|interpro:IPR019956|interpro:IPR019955|rcsb pdb:3L0W|rcsb pdb:3L10|rcsb pdb:3MHS|rcsb pdb:2KDI go:"GO:0016567"(protein ubiquitination) crc64:86CE0C4E6194C286 no-uniprot-update:obsolete protein figure legend:Figure 3b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2009/03/11 2014/10/16 rogid:IjsgR+hZDgTQDvy2Wf8JEX4kF+A559292 rogid:sUFDb7kGedoC/k80bI4sjOaMLHs4932 intact-crc:F785CBA054CF096D|rigid:y4C2jvuH+oBhBu36+j8tSSwFv0M false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02642 uniprotkb:P38879 intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C intact:EBI-6379|uniprotkb:D3DLE1|ensemblfungi:YHR193C psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:naca_yeast(display_long)|uniprotkb:EGD2(gene name)|psi-mi:EGD2(display_short)|uniprotkb:Alpha-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 2(gene name synonym)|uniprotkb:YHR193C(locus name) psi-mi:"MI:0096"(pull down) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2271677|imex:IM-18933-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 sgd:S000001236|refseq:NP_012063.3|mint:P38879|dip:DIP-2098N|ensemblfungi:YHR193C(gene)|ensemblfungi:YHR193C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006612"(protein targeting to membrane)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0070273"(phosphatidylinositol-4-phosphate binding)|go:"GO:0070300"(phosphatidic acid binding)|go:"GO:0080025"(phosphatidylinositol-3,5-bisphosphate binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR009060(UBA-like)|interpro:IPR016641(Nascent polypeptide-associated complex, alpha subunit)|interpro:IPR038187|interpro:IPR044034 - crc64:7C278A3DC79BF95B crc64:86CE0C4E6194C286 figure legend:Figure 1b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 rogid:IjsgR+hZDgTQDvy2Wf8JEX4kF+A559292 intact-crc:BF88B68E072ED807|rigid:lEMETCHZvbMW76UygsP2g4DwEZE false his tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q02642 uniprotkb:P04456 intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C intact:EBI-15308|uniprotkb:D6W1U1|ensemblfungi:YOL127W psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:rl25_yeast(display_long)|uniprotkb:YOL127W(locus name)|uniprotkb:RPL25(gene name)|psi-mi:RPL25(display_short)|uniprotkb:YL25(gene name synonym)|uniprotkb:RP16L(gene name synonym)|uniprotkb:YP42'(gene name synonym)|uniprotkb:Large ribosomal subunit protein uL23(gene name synonym) psi-mi:"MI:0096"(pull down) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2271677|imex:IM-18933-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 refseq:NP_014514.1|sgd:S000005487|reactome:R-SCE-156827|reactome:R-SCE-72689|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|reactome:R-SCE-1799339|ensemblfungi:YOL127W(gene)|ensemblfungi:YOL127W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0019843"(rRNA binding)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR001014(Ribosomal protein L23, conserved site)|interpro:IPR005633(Ribosomal protein L23/L25, N-terminal)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012678(Ribosomal protein L23/L15e, core)|interpro:IPR013025(Ribosomal protein L25/L23)|rcsb pdb:1K5Y|rcsb pdb:2WW9|rcsb pdb:2WWA|rcsb pdb:2WWB|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:5JUT|rcsb pdb:5JUU|rcsb pdb:5LYB|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5MEI|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:5ON6|rcsb pdb:5T62|rcsb pdb:5T6R|rcsb pdb:5TBW|rcsb pdb:5TGA|rcsb pdb:5TGM|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6HD7|rcsb pdb:6HHQ|rcsb pdb:6I7O|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6N8M|rcsb pdb:6N8N|rcsb pdb:6N8O|rcsb pdb:6OIG|rcsb pdb:6Q8Y|rcsb pdb:6QIK|rcsb pdb:6QT0|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6R86|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6RZZ|rcsb pdb:6S05|rcsb pdb:6S47|rcsb pdb:6SNT|rcsb pdb:6SV4|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6WOO|rcsb pdb:6XIQ|rcsb pdb:6XIR|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:3J78|rcsb pdb:3JCT|rcsb pdb:4U3M|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V4B|rcsb pdb:4V6I|rcsb pdb:4V7F|rcsb pdb:4V7R|rcsb pdb:4V88|rcsb pdb:4V8T|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:4V91|rcsb pdb:5APN|rcsb pdb:5APO|rcsb pdb:5DAT|rcsb pdb:5DC3|rcsb pdb:5DGE|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5FL8|rcsb pdb:5GAK|rcsb pdb:5H4P|rcsb pdb:5I4L|rcsb pdb:5JCS|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:7AZY|rcsb pdb:7B7D|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:7NRC|rcsb pdb:7NRD|dip:DIP-7137N - crc64:7C278A3DC79BF95B - figure legend:Figure 1b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 rogid:EjLr1wGyykXvvHofNGPonJi/OtM559292 intact-crc:BF88B68E072ED807|rigid:lEMETCHZvbMW76UygsP2g4DwEZE false his tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q02642 uniprotkb:P34909 intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C intact:EBI-12174|uniprotkb:D3DLX3|ensemblfungi:YER068W psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:not4_yeast(display_long)|uniprotkb:MOT2(gene name)|psi-mi:MOT2(display_short)|uniprotkb:CCL1(gene name synonym)|uniprotkb:NOT4(gene name synonym)|uniprotkb:SIG1(gene name synonym)|uniprotkb:SSF1(gene name synonym)|uniprotkb:Modulator of transcription 2(gene name synonym)|uniprotkb:YER068W(locus name) psi-mi:"MI:0096"(pull down) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2271677|imex:IM-18933-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 ensemblfungi:YER068W(gene)|ensemblfungi:YER068W_mRNA(transcript)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0003723"(RNA binding)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0010498"(proteasomal protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0046872"(metal ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR034261|interpro:IPR035979|interpro:IPR039515|interpro:IPR039780|rcsb pdb:5AIE|rcsb pdb:5AJD|refseq:NP_010991.3|sgd:S000000870|dip:DIP-2255N|mint:P34909 - crc64:7C278A3DC79BF95B crc64:8847084BD9BF48B7 figure legend:Figure 1b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 rogid:TLt8Wu8+ygYk/0dtfXHhnCITKqc559292 intact-crc:BF88B68E072ED807|rigid:lEMETCHZvbMW76UygsP2g4DwEZE false his tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q02642 uniprotkb:Q12514 intact:EBI-6371|uniprotkb:Q02107|uniprotkb:D6W3X7|ensemblfungi:YPL037C intact:EBI-12184|uniprotkb:D6W476|ensemblfungi:YPR072W psi-mi:nacb1_yeast(display_long)|uniprotkb:EGD1(gene name)|psi-mi:EGD1(display_short)|uniprotkb:Beta-1-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 1(gene name synonym)|uniprotkb:BTF3 homolog EGD1(gene name synonym)|uniprotkb:YPL037C(locus name) psi-mi:not5_yeast(display_long)|uniprotkb:NOT5(gene name)|psi-mi:NOT5(display_short)|uniprotkb:YP9499.27(orf name)|uniprotkb:YPR072W(locus name) psi-mi:"MI:0096"(pull down) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2271677|imex:IM-18933-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015288.1|sgd:S000005958|mint:Q02642|dip:DIP-6561N|ensemblfungi:YPL037C(gene)|ensemblfungi:YPL037C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0042788"(polysomal ribosome)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR038187|interpro:IPR039370 ensemblfungi:YPR072W(gene)|go:"GO:0000289"("nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|interpro:IPR007207(Not CCR4-Not complex component, N-terminal)|interpro:IPR007282(NOT2/NOT3/NOT5)|interpro:IPR012270(CCR4-NOT complex, subunits 3 and 5)|interpro:IPR038635|interpro:IPR040168|rcsb pdb:4BY6|rcsb pdb:6TB3|ensemblfungi:YPR072W_mRNA(transcript)|refseq:NP_015397.1|sgd:S000006276|dip:DIP-2257N|mint:Q12514 - crc64:7C278A3DC79BF95B crc64:073137119B3E92BC figure legend:Figure 1b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:Lrun0emRynb8tO3ViEF/fkUI9SQ559292 rogid:+XON8Ps4xCFhw058U9d2voUy2dc559292 intact-crc:BF88B68E072ED807|rigid:lEMETCHZvbMW76UygsP2g4DwEZE false his tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P53829 uniprotkb:P38879 intact:EBI-28306|uniprotkb:D6W0Q5|ensemblfungi:YNL288W intact:EBI-6379|uniprotkb:D3DLE1|ensemblfungi:YHR193C psi-mi:caf40_yeast(display_long)|uniprotkb:YNL288W(locus name)|uniprotkb:N0540(orf name)|uniprotkb:40 kDa CCR4-associated factor(gene name synonym)|uniprotkb:CAF40(gene name)|psi-mi:CAF40(display_short) psi-mi:naca_yeast(display_long)|uniprotkb:EGD2(gene name)|psi-mi:EGD2(display_short)|uniprotkb:Alpha-NAC(gene name synonym)|uniprotkb:GAL4 DNA-binding enhancer protein 2(gene name synonym)|uniprotkb:YHR193C(locus name) psi-mi:"MI:0096"(pull down) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2271720|imex:IM-18933-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014111.1|sgd:S000005232|dip:DIP-1995N|mint:P53829|ensemblfungi:YNL288W(gene)|ensemblfungi:YNL288W_mRNA(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|interpro:IPR007216(Cell differentiation, Rcd1-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|rcsb pdb:4CV5 sgd:S000001236|refseq:NP_012063.3|mint:P38879|dip:DIP-2098N|ensemblfungi:YHR193C(gene)|ensemblfungi:YHR193C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005854"(nascent polypeptide-associated complex)|go:"GO:0006612"(protein targeting to membrane)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0032266"(phosphatidylinositol-3-phosphate binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0070273"(phosphatidylinositol-4-phosphate binding)|go:"GO:0070300"(phosphatidic acid binding)|go:"GO:0080025"(phosphatidylinositol-3,5-bisphosphate binding)|interpro:IPR002715(Nascent polypeptide-associated complex NAC)|interpro:IPR009060(UBA-like)|interpro:IPR016641(Nascent polypeptide-associated complex, alpha subunit)|interpro:IPR038187|interpro:IPR044034 - crc64:F3DBABE6AD3C7F3C crc64:86CE0C4E6194C286 figure legend:Figure 1C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:etuSSgFGQOcgxPDexEXUqQg6H5s559292 rogid:IjsgR+hZDgTQDvy2Wf8JEX4kF+A559292 intact-crc:A7D9B00F311E59FE|rigid:Ru+U3c0qlMYQUQEG24heBpvTC30 false glutathione s tranferase tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P53829 uniprotkb:P34909 intact:EBI-28306|uniprotkb:D6W0Q5|ensemblfungi:YNL288W intact:EBI-12174|uniprotkb:D3DLX3|ensemblfungi:YER068W psi-mi:caf40_yeast(display_long)|uniprotkb:YNL288W(locus name)|uniprotkb:N0540(orf name)|uniprotkb:40 kDa CCR4-associated factor(gene name synonym)|uniprotkb:CAF40(gene name)|psi-mi:CAF40(display_short) psi-mi:not4_yeast(display_long)|uniprotkb:MOT2(gene name)|psi-mi:MOT2(display_short)|uniprotkb:CCL1(gene name synonym)|uniprotkb:NOT4(gene name synonym)|uniprotkb:SIG1(gene name synonym)|uniprotkb:SSF1(gene name synonym)|uniprotkb:Modulator of transcription 2(gene name synonym)|uniprotkb:YER068W(locus name) psi-mi:"MI:0096"(pull down) Panasenko et al. (2006) pubmed:16926149|imex:IM-18933 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2271720|imex:IM-18933-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014111.1|sgd:S000005232|dip:DIP-1995N|mint:P53829|ensemblfungi:YNL288W(gene)|ensemblfungi:YNL288W_mRNA(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|interpro:IPR007216(Cell differentiation, Rcd1-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|rcsb pdb:4CV5 ensemblfungi:YER068W(gene)|ensemblfungi:YER068W_mRNA(transcript)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0003723"(RNA binding)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0010498"(proteasomal protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0046872"(metal ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR034261|interpro:IPR035979|interpro:IPR039515|interpro:IPR039780|rcsb pdb:5AIE|rcsb pdb:5AJD|refseq:NP_010991.3|sgd:S000000870|dip:DIP-2255N|mint:P34909 - crc64:F3DBABE6AD3C7F3C crc64:8847084BD9BF48B7 figure legend:Figure 1C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2009/03/11 2014/10/16 rogid:etuSSgFGQOcgxPDexEXUqQg6H5s559292 rogid:TLt8Wu8+ygYk/0dtfXHhnCITKqc559292 intact-crc:A7D9B00F311E59FE|rigid:Ru+U3c0qlMYQUQEG24heBpvTC30 false glutathione s tranferase tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot)