#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B intact:EBI-1798351 uniprotkb:Q9STM3 - intact:EBI-1798387|ensemblplants:AT3G48430.1 psi-mi:e2-arath-dna(display_short)|psi-mi:EBI-1798351(display_long) psi-mi:ref6_arath(display_long)|uniprotkb:Jumonji domain-containing protein 12(gene name synonym)|uniprotkb:Lysine-specific histone demethylase REF6(gene name synonym)|uniprotkb:Protein RELATIVE OF EARLY FLOWERING 6(gene name synonym)|uniprotkb:T29H11_50(orf name)|uniprotkb:JMJ12(gene name synonym)|uniprotkb:PKDM9A(gene name synonym)|uniprotkb:At3g48430(locus name)|uniprotkb:REF6(gene name)|psi-mi:REF6(display_short) psi-mi:"MI:0432"(one hybrid) Yu et al. (2008) pubmed:18467490|imex:IM-9348 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-1798407|imex:IM-9348-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0318"(nucleic acid) psi-mi:"MI:0326"(protein) - refseq:NP_680116.2|dip:DIP-46006N|ensemblplants:AT3G48430(gene)|ensemblplants:AT3G48430.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0009612"(response to mechanical stimulus)|go:"GO:0009741"(response to brassinosteroid)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0009873"(ethylene-activated signaling pathway)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0010228"(vegetative to reproductive phase transition of meristem)|go:"GO:0032452"(histone demethylase activity)|go:"GO:0033169"(histone H3-K9 demethylation)|go:"GO:0034647"(histone H3-tri/di/monomethyl-lysine-4 demethylase activity)|go:"GO:0035067"(negative regulation of histone acetylation)|go:"GO:0046872"(metal ion binding)|go:"GO:0048366"(leaf development)|go:"GO:0051213"(dioxygenase activity)|interpro:IPR003347(Transcription factor jumonji/aspartyl beta-hydroxylase)|interpro:IPR003349(Transcription factor jumonji, JmjN)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|rcsb pdb:6A57|rcsb pdb:6A58|rcsb pdb:6A59|rcsb pdb:6JNL|rcsb pdb:6JNM|rcsb pdb:6JNN - - - figure legend:Figure 1|comment:The authors concluded that BES1 and REF6 interact.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/08/05 2017/06/30 crc64:3AD4AF696505FC37 rogid:TF5rDTPOFL6k74pZSm6fI8BdUBw3702 intact-crc:DD6A3D23239726B3 false - sufficient binding region:1180-1326 - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-1798351 uniprotkb:Q9LN63 - intact:EBI-617078|ensemblplants:AT1G19350.1|ensemblplants:AT1G19350.4|ensemblplants:AT1G19350.5|ensemblplants:AT1G19350.6|uniprotkb:Q8LCX8|uniprotkb:Q94JU1|uniprotkb:Q9SEG5 psi-mi:e2-arath-dna(display_short)|psi-mi:EBI-1798351(display_long) psi-mi:bzr2_arath(display_long)|uniprotkb:BZR2(gene name)|psi-mi:BZR2(display_short)|uniprotkb:BES1(gene name synonym)|uniprotkb:BIS1(gene name synonym)|uniprotkb:At1g19350(locus name)|uniprotkb:F18O14_4(orf name)|uniprotkb:Protein BRI1-EMS-SUPPRESSOR 1(gene name synonym)|uniprotkb:Protein BIN2 SUBSTRATE 1(gene name synonym)|uniprotkb:Protein 107(gene name synonym) psi-mi:"MI:0432"(one hybrid) Yu et al. (2008) pubmed:18467490|imex:IM-9348 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-1798407|imex:IM-9348-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0318"(nucleic acid) psi-mi:"MI:0326"(protein) - ensemblplants:AT1G19350(gene)|ensemblplants:AT1G19350.1(transcript)|ensemblplants:AT1G19350.4(transcript)|ensemblplants:AT1G19350.5(transcript)|ensemblplants:AT1G19350.6(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0009742"(brassinosteroid mediated signaling pathway)|go:"GO:0071367"(cellular response to brassinosteroid stimulus)|go:"GO:1904961"(quiescent center organization)|interpro:IPR008540(BZR1, transcriptional repressor)|interpro:IPR033264|refseq:NP_001077562.1|refseq:NP_564081.1|refseq:NP_973864.1|refseq:NP_973865.1|dip:DIP-34780N - - - figure legend:Figure 1|comment:The authors concluded that BES1 and REF6 interact.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/08/05 2017/06/30 crc64:3AD4AF696505FC37 rogid:eYK77tz47svwh8B60LOwW+F36rI3702 intact-crc:DD6A3D23239726B3 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-1798351 uniprotkb:Q9LN63 - intact:EBI-617078|ensemblplants:AT1G19350.1|ensemblplants:AT1G19350.4|ensemblplants:AT1G19350.5|ensemblplants:AT1G19350.6|uniprotkb:Q8LCX8|uniprotkb:Q94JU1|uniprotkb:Q9SEG5 psi-mi:e2-arath-dna(display_short)|psi-mi:EBI-1798351(display_long) psi-mi:bzr2_arath(display_long)|uniprotkb:BZR2(gene name)|psi-mi:BZR2(display_short)|uniprotkb:BES1(gene name synonym)|uniprotkb:BIS1(gene name synonym)|uniprotkb:At1g19350(locus name)|uniprotkb:F18O14_4(orf name)|uniprotkb:Protein BRI1-EMS-SUPPRESSOR 1(gene name synonym)|uniprotkb:Protein BIN2 SUBSTRATE 1(gene name synonym)|uniprotkb:Protein 107(gene name synonym) psi-mi:"MI:0432"(one hybrid) Yu et al. (2008) pubmed:18467490|imex:IM-9348 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-1798433|imex:IM-9348-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0318"(nucleic acid) psi-mi:"MI:0326"(protein) - ensemblplants:AT1G19350(gene)|ensemblplants:AT1G19350.1(transcript)|ensemblplants:AT1G19350.4(transcript)|ensemblplants:AT1G19350.5(transcript)|ensemblplants:AT1G19350.6(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0009742"(brassinosteroid mediated signaling pathway)|go:"GO:0071367"(cellular response to brassinosteroid stimulus)|go:"GO:1904961"(quiescent center organization)|interpro:IPR008540(BZR1, transcriptional repressor)|interpro:IPR033264|refseq:NP_001077562.1|refseq:NP_564081.1|refseq:NP_973864.1|refseq:NP_973865.1|dip:DIP-34780N - - - figure legend:Figure 1|comment:The authors concluded that BES1 interacts with ELF6.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/08/05 2017/06/30 crc64:3AD4AF696505FC37 rogid:eYK77tz47svwh8B60LOwW+F36rI3702 intact-crc:DACE092C2B1C57D7 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) intact:EBI-1798351 uniprotkb:Q6BDA0 - intact:EBI-1798417|uniprotkb:Q56WH6|uniprotkb:Q9FYD7|ensemblplants:AT5G04240.1 psi-mi:e2-arath-dna(display_short)|psi-mi:EBI-1798351(display_long) psi-mi:elf6_arath(display_long)|uniprotkb:JMJ11(gene name synonym)|uniprotkb:PKDM9B(gene name synonym)|uniprotkb:Early flowering 6(gene name synonym)|uniprotkb:Jumonji domain-containing protein 11(gene name synonym)|uniprotkb:Probable lysine-specific histone demethylase ELF6(gene name synonym)|uniprotkb:F21E1.160(orf name)|uniprotkb:ELF6(gene name)|psi-mi:ELF6(display_short)|uniprotkb:At5g04240(locus name) psi-mi:"MI:0432"(one hybrid) Yu et al. (2008) pubmed:18467490|imex:IM-9348 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-1798433|imex:IM-9348-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0318"(nucleic acid) psi-mi:"MI:0326"(protein) - refseq:NP_196044.2|dip:DIP-46102N|ensemblplants:AT5G04240(gene)|ensemblplants:AT5G04240.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0009741"(response to brassinosteroid)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0032452"(histone demethylase activity)|go:"GO:0033169"(histone H3-K9 demethylation)|go:"GO:0034647"(histone H3-tri/di/monomethyl-lysine-4 demethylase activity)|go:"GO:0046872"(metal ion binding)|go:"GO:0048577"(negative regulation of short-day photoperiodism, flowering)|go:"GO:0048579"(negative regulation of long-day photoperiodism, flowering)|go:"GO:0051213"(dioxygenase activity)|interpro:IPR003347(Transcription factor jumonji/aspartyl beta-hydroxylase)|interpro:IPR003349(Transcription factor jumonji, JmjN)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236 - - - figure legend:Figure 1|comment:The authors concluded that BES1 interacts with ELF6.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/08/05 2017/06/30 crc64:3AD4AF696505FC37 rogid:GRHZfM9TV/TPZowhD5xOoh2PRsQ3702 intact-crc:DACE092C2B1C57D7 false - sufficient binding region:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q9LN63-1 intact:EBI-1798351 intact:EBI-1489609|ensemblplants:AT1G19350.1|ensemblplants:AT1G19350.4|ensemblplants:AT1G19350.5|ensemblplants:AT1G19350.6 - psi-mi:q9ln63-1(display_long)|uniprotkb:BZR2(gene name)|psi-mi:BZR2(display_short)|uniprotkb:BES1(gene name synonym)|uniprotkb:BIS1(gene name synonym)|uniprotkb:Protein 107(gene name synonym)|uniprotkb:Protein BIN2 SUBSTRATE 1(gene name synonym)|uniprotkb:Protein BRI1-EMS-SUPPRESSOR 1(gene name synonym)|uniprotkb:F18O14_4(orf name)|uniprotkb:At1g19350(locus name) psi-mi:e2-arath-dna(display_short)|psi-mi:EBI-1798351(display_long) psi-mi:"MI:0432"(one hybrid) Yu et al. (2008) pubmed:18467490|imex:IM-9348 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-1798453|imex:IM-9348-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0318"(nucleic acid) ensemblplants:AT1G19350(gene)|ensemblplants:AT1G19350.1(transcript)|ensemblplants:AT1G19350.4(transcript)|ensemblplants:AT1G19350.5(transcript)|ensemblplants:AT1G19350.6(transcript)|intact:EBI-617078(isoform-parent) - - - - figure legend:Figure 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/08/05 2017/06/30 rogid:eYK77tz47svwh8B60LOwW+F36rI3702 crc64:3AD4AF696505FC37 intact-crc:AE0D1FA53BA89763 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q6BDA0 uniprotkb:Q9LN63 intact:EBI-1798417|uniprotkb:Q56WH6|uniprotkb:Q9FYD7|ensemblplants:AT5G04240.1 intact:EBI-617078|ensemblplants:AT1G19350.1|ensemblplants:AT1G19350.4|ensemblplants:AT1G19350.5|ensemblplants:AT1G19350.6|uniprotkb:Q8LCX8|uniprotkb:Q94JU1|uniprotkb:Q9SEG5 psi-mi:elf6_arath(display_long)|uniprotkb:JMJ11(gene name synonym)|uniprotkb:PKDM9B(gene name synonym)|uniprotkb:Early flowering 6(gene name synonym)|uniprotkb:Jumonji domain-containing protein 11(gene name synonym)|uniprotkb:Probable lysine-specific histone demethylase ELF6(gene name synonym)|uniprotkb:F21E1.160(orf name)|uniprotkb:ELF6(gene name)|psi-mi:ELF6(display_short)|uniprotkb:At5g04240(locus name) psi-mi:bzr2_arath(display_long)|uniprotkb:BZR2(gene name)|psi-mi:BZR2(display_short)|uniprotkb:BES1(gene name synonym)|uniprotkb:BIS1(gene name synonym)|uniprotkb:At1g19350(locus name)|uniprotkb:F18O14_4(orf name)|uniprotkb:Protein BRI1-EMS-SUPPRESSOR 1(gene name synonym)|uniprotkb:Protein BIN2 SUBSTRATE 1(gene name synonym)|uniprotkb:Protein 107(gene name synonym) psi-mi:"MI:0096"(pull down) Yu et al. (2008) pubmed:18467490|imex:IM-9348 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-1798506|imex:IM-9348-3|dip:DIP-87877E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_196044.2|dip:DIP-46102N|ensemblplants:AT5G04240(gene)|ensemblplants:AT5G04240.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0009741"(response to brassinosteroid)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0032452"(histone demethylase activity)|go:"GO:0033169"(histone H3-K9 demethylation)|go:"GO:0034647"(histone H3-tri/di/monomethyl-lysine-4 demethylase activity)|go:"GO:0046872"(metal ion binding)|go:"GO:0048577"(negative regulation of short-day photoperiodism, flowering)|go:"GO:0048579"(negative regulation of long-day photoperiodism, flowering)|go:"GO:0051213"(dioxygenase activity)|interpro:IPR003347(Transcription factor jumonji/aspartyl beta-hydroxylase)|interpro:IPR003349(Transcription factor jumonji, JmjN)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236 ensemblplants:AT1G19350(gene)|ensemblplants:AT1G19350.1(transcript)|ensemblplants:AT1G19350.4(transcript)|ensemblplants:AT1G19350.5(transcript)|ensemblplants:AT1G19350.6(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0009742"(brassinosteroid mediated signaling pathway)|go:"GO:0071367"(cellular response to brassinosteroid stimulus)|go:"GO:1904961"(quiescent center organization)|interpro:IPR008540(BZR1, transcriptional repressor)|interpro:IPR033264|refseq:NP_001077562.1|refseq:NP_564081.1|refseq:NP_973864.1|refseq:NP_973865.1|dip:DIP-34780N psi-mi:"MI:0465"(dip) - - figure legend:Figure 2|comment:"The authors concluded that \"both the zinc fingers and the fragment immediately upstream of zinc fingers of ELF6 and REF6 contributed to the interaction with BES1\"."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/08/05 2017/06/30 rogid:GRHZfM9TV/TPZowhD5xOoh2PRsQ3702 rogid:eYK77tz47svwh8B60LOwW+F36rI3702 intact-crc:58E45CDFD8C9D508|rigid:DB35XHWA6d6EacRseEZTGy0CM4k false glutathione s tranferase tag:?-? maltose binding protein tag:n-n|necessary binding region:21-41 - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q9LN63 uniprotkb:Q9STM3 intact:EBI-617078|ensemblplants:AT1G19350.1|ensemblplants:AT1G19350.4|ensemblplants:AT1G19350.5|ensemblplants:AT1G19350.6|uniprotkb:Q8LCX8|uniprotkb:Q94JU1|uniprotkb:Q9SEG5 intact:EBI-1798387|ensemblplants:AT3G48430.1 psi-mi:bzr2_arath(display_long)|uniprotkb:BZR2(gene name)|psi-mi:BZR2(display_short)|uniprotkb:BES1(gene name synonym)|uniprotkb:BIS1(gene name synonym)|uniprotkb:At1g19350(locus name)|uniprotkb:F18O14_4(orf name)|uniprotkb:Protein BRI1-EMS-SUPPRESSOR 1(gene name synonym)|uniprotkb:Protein BIN2 SUBSTRATE 1(gene name synonym)|uniprotkb:Protein 107(gene name synonym) psi-mi:ref6_arath(display_long)|uniprotkb:Jumonji domain-containing protein 12(gene name synonym)|uniprotkb:Lysine-specific histone demethylase REF6(gene name synonym)|uniprotkb:Protein RELATIVE OF EARLY FLOWERING 6(gene name synonym)|uniprotkb:T29H11_50(orf name)|uniprotkb:JMJ12(gene name synonym)|uniprotkb:PKDM9A(gene name synonym)|uniprotkb:At3g48430(locus name)|uniprotkb:REF6(gene name)|psi-mi:REF6(display_short) psi-mi:"MI:0096"(pull down) Yu et al. (2008) pubmed:18467490|imex:IM-9348 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-1798520|dip:DIP-87685E|imex:IM-9348-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT1G19350(gene)|ensemblplants:AT1G19350.1(transcript)|ensemblplants:AT1G19350.4(transcript)|ensemblplants:AT1G19350.5(transcript)|ensemblplants:AT1G19350.6(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0009742"(brassinosteroid mediated signaling pathway)|go:"GO:0071367"(cellular response to brassinosteroid stimulus)|go:"GO:1904961"(quiescent center organization)|interpro:IPR008540(BZR1, transcriptional repressor)|interpro:IPR033264|refseq:NP_001077562.1|refseq:NP_564081.1|refseq:NP_973864.1|refseq:NP_973865.1|dip:DIP-34780N refseq:NP_680116.2|dip:DIP-46006N|ensemblplants:AT3G48430(gene)|ensemblplants:AT3G48430.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0009612"(response to mechanical stimulus)|go:"GO:0009741"(response to brassinosteroid)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0009873"(ethylene-activated signaling pathway)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0010228"(vegetative to reproductive phase transition of meristem)|go:"GO:0032452"(histone demethylase activity)|go:"GO:0033169"(histone H3-K9 demethylation)|go:"GO:0034647"(histone H3-tri/di/monomethyl-lysine-4 demethylase activity)|go:"GO:0035067"(negative regulation of histone acetylation)|go:"GO:0046872"(metal ion binding)|go:"GO:0048366"(leaf development)|go:"GO:0051213"(dioxygenase activity)|interpro:IPR003347(Transcription factor jumonji/aspartyl beta-hydroxylase)|interpro:IPR003349(Transcription factor jumonji, JmjN)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|rcsb pdb:6A57|rcsb pdb:6A58|rcsb pdb:6A59|rcsb pdb:6JNL|rcsb pdb:6JNM|rcsb pdb:6JNN psi-mi:"MI:0465"(dip) - - figure legend:Figure 2|comment:"The authors concluded that \"both the zinc fingers and the fragment immediately upstream of zinc fingers of ELF6 and REF6 contributed to the interaction with BES1\"."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/08/05 2017/06/30 rogid:eYK77tz47svwh8B60LOwW+F36rI3702 rogid:TF5rDTPOFL6k74pZSm6fI8BdUBw3702 intact-crc:5C320C47D553307B|rigid:WgtW+iNQcWLOiO2hkbBCghUw7GU false necessary binding region:21-41|maltose binding protein tag:n-n glutathione s tranferase tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q6BDA0 uniprotkb:Q9LN63 intact:EBI-1798417|uniprotkb:Q56WH6|uniprotkb:Q9FYD7|ensemblplants:AT5G04240.1 intact:EBI-617078|ensemblplants:AT1G19350.1|ensemblplants:AT1G19350.4|ensemblplants:AT1G19350.5|ensemblplants:AT1G19350.6|uniprotkb:Q8LCX8|uniprotkb:Q94JU1|uniprotkb:Q9SEG5 psi-mi:elf6_arath(display_long)|uniprotkb:JMJ11(gene name synonym)|uniprotkb:PKDM9B(gene name synonym)|uniprotkb:Early flowering 6(gene name synonym)|uniprotkb:Jumonji domain-containing protein 11(gene name synonym)|uniprotkb:Probable lysine-specific histone demethylase ELF6(gene name synonym)|uniprotkb:F21E1.160(orf name)|uniprotkb:ELF6(gene name)|psi-mi:ELF6(display_short)|uniprotkb:At5g04240(locus name) psi-mi:bzr2_arath(display_long)|uniprotkb:BZR2(gene name)|psi-mi:BZR2(display_short)|uniprotkb:BES1(gene name synonym)|uniprotkb:BIS1(gene name synonym)|uniprotkb:At1g19350(locus name)|uniprotkb:F18O14_4(orf name)|uniprotkb:Protein BRI1-EMS-SUPPRESSOR 1(gene name synonym)|uniprotkb:Protein BIN2 SUBSTRATE 1(gene name synonym)|uniprotkb:Protein 107(gene name synonym) psi-mi:"MI:0096"(pull down) Yu et al. (2008) pubmed:18467490|imex:IM-9348 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-15187720|imex:IM-9348-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_196044.2|dip:DIP-46102N|ensemblplants:AT5G04240(gene)|ensemblplants:AT5G04240.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0009741"(response to brassinosteroid)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0032452"(histone demethylase activity)|go:"GO:0033169"(histone H3-K9 demethylation)|go:"GO:0034647"(histone H3-tri/di/monomethyl-lysine-4 demethylase activity)|go:"GO:0046872"(metal ion binding)|go:"GO:0048577"(negative regulation of short-day photoperiodism, flowering)|go:"GO:0048579"(negative regulation of long-day photoperiodism, flowering)|go:"GO:0051213"(dioxygenase activity)|interpro:IPR003347(Transcription factor jumonji/aspartyl beta-hydroxylase)|interpro:IPR003349(Transcription factor jumonji, JmjN)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236 ensemblplants:AT1G19350(gene)|ensemblplants:AT1G19350.1(transcript)|ensemblplants:AT1G19350.4(transcript)|ensemblplants:AT1G19350.5(transcript)|ensemblplants:AT1G19350.6(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0009742"(brassinosteroid mediated signaling pathway)|go:"GO:0071367"(cellular response to brassinosteroid stimulus)|go:"GO:1904961"(quiescent center organization)|interpro:IPR008540(BZR1, transcriptional repressor)|interpro:IPR033264|refseq:NP_001077562.1|refseq:NP_564081.1|refseq:NP_973864.1|refseq:NP_973865.1|dip:DIP-34780N - - - figure legend:Figure 2|comment:"The authors concluded that \"both the zinc fingers and the fragment immediately upstream of zinc fingers of ELF6 and REF6 contributed to the interaction with BES1\"."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/08/05 2017/06/30 rogid:GRHZfM9TV/TPZowhD5xOoh2PRsQ3702 rogid:eYK77tz47svwh8B60LOwW+F36rI3702 intact-crc:CCB2A3DD0D435163|rigid:DB35XHWA6d6EacRseEZTGy0CM4k false sufficient binding region:1147-1340|glutathione s tranferase tag:?-? maltose binding protein tag:n-n|sufficient binding region:1-98 - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q9LN63 uniprotkb:Q9STM3 intact:EBI-617078|ensemblplants:AT1G19350.1|ensemblplants:AT1G19350.4|ensemblplants:AT1G19350.5|ensemblplants:AT1G19350.6|uniprotkb:Q8LCX8|uniprotkb:Q94JU1|uniprotkb:Q9SEG5 intact:EBI-1798387|ensemblplants:AT3G48430.1 psi-mi:bzr2_arath(display_long)|uniprotkb:BZR2(gene name)|psi-mi:BZR2(display_short)|uniprotkb:BES1(gene name synonym)|uniprotkb:BIS1(gene name synonym)|uniprotkb:At1g19350(locus name)|uniprotkb:F18O14_4(orf name)|uniprotkb:Protein BRI1-EMS-SUPPRESSOR 1(gene name synonym)|uniprotkb:Protein BIN2 SUBSTRATE 1(gene name synonym)|uniprotkb:Protein 107(gene name synonym) psi-mi:ref6_arath(display_long)|uniprotkb:Jumonji domain-containing protein 12(gene name synonym)|uniprotkb:Lysine-specific histone demethylase REF6(gene name synonym)|uniprotkb:Protein RELATIVE OF EARLY FLOWERING 6(gene name synonym)|uniprotkb:T29H11_50(orf name)|uniprotkb:JMJ12(gene name synonym)|uniprotkb:PKDM9A(gene name synonym)|uniprotkb:At3g48430(locus name)|uniprotkb:REF6(gene name)|psi-mi:REF6(display_short) psi-mi:"MI:0096"(pull down) Yu et al. (2008) pubmed:18467490|imex:IM-9348 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-15187762|imex:IM-9348-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT1G19350(gene)|ensemblplants:AT1G19350.1(transcript)|ensemblplants:AT1G19350.4(transcript)|ensemblplants:AT1G19350.5(transcript)|ensemblplants:AT1G19350.6(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0009742"(brassinosteroid mediated signaling pathway)|go:"GO:0071367"(cellular response to brassinosteroid stimulus)|go:"GO:1904961"(quiescent center organization)|interpro:IPR008540(BZR1, transcriptional repressor)|interpro:IPR033264|refseq:NP_001077562.1|refseq:NP_564081.1|refseq:NP_973864.1|refseq:NP_973865.1|dip:DIP-34780N refseq:NP_680116.2|dip:DIP-46006N|ensemblplants:AT3G48430(gene)|ensemblplants:AT3G48430.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0009612"(response to mechanical stimulus)|go:"GO:0009741"(response to brassinosteroid)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0009873"(ethylene-activated signaling pathway)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0010228"(vegetative to reproductive phase transition of meristem)|go:"GO:0032452"(histone demethylase activity)|go:"GO:0033169"(histone H3-K9 demethylation)|go:"GO:0034647"(histone H3-tri/di/monomethyl-lysine-4 demethylase activity)|go:"GO:0035067"(negative regulation of histone acetylation)|go:"GO:0046872"(metal ion binding)|go:"GO:0048366"(leaf development)|go:"GO:0051213"(dioxygenase activity)|interpro:IPR003347(Transcription factor jumonji/aspartyl beta-hydroxylase)|interpro:IPR003349(Transcription factor jumonji, JmjN)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|rcsb pdb:6A57|rcsb pdb:6A58|rcsb pdb:6A59|rcsb pdb:6JNL|rcsb pdb:6JNM|rcsb pdb:6JNN psi-mi:"MI:0465"(dip) - - figure legend:Figure 2|comment:"The authors concluded that \"both the zinc fingers and the fragment immediately upstream of zinc fingers of ELF6 and REF6 contributed to the interaction with BES1\"."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/08/05 2017/06/30 rogid:eYK77tz47svwh8B60LOwW+F36rI3702 rogid:TF5rDTPOFL6k74pZSm6fI8BdUBw3702 intact-crc:C866F14D1949E6DC|rigid:WgtW+iNQcWLOiO2hkbBCghUw7GU false sufficient binding region:1-98|maltose binding protein tag:n-n sufficient binding region:1243-1352(IPR013087)|glutathione s tranferase tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q6BDA0 uniprotkb:Q9LN63 intact:EBI-1798417|uniprotkb:Q56WH6|uniprotkb:Q9FYD7|ensemblplants:AT5G04240.1 intact:EBI-617078|ensemblplants:AT1G19350.1|ensemblplants:AT1G19350.4|ensemblplants:AT1G19350.5|ensemblplants:AT1G19350.6|uniprotkb:Q8LCX8|uniprotkb:Q94JU1|uniprotkb:Q9SEG5 psi-mi:elf6_arath(display_long)|uniprotkb:JMJ11(gene name synonym)|uniprotkb:PKDM9B(gene name synonym)|uniprotkb:Early flowering 6(gene name synonym)|uniprotkb:Jumonji domain-containing protein 11(gene name synonym)|uniprotkb:Probable lysine-specific histone demethylase ELF6(gene name synonym)|uniprotkb:F21E1.160(orf name)|uniprotkb:ELF6(gene name)|psi-mi:ELF6(display_short)|uniprotkb:At5g04240(locus name) psi-mi:bzr2_arath(display_long)|uniprotkb:BZR2(gene name)|psi-mi:BZR2(display_short)|uniprotkb:BES1(gene name synonym)|uniprotkb:BIS1(gene name synonym)|uniprotkb:At1g19350(locus name)|uniprotkb:F18O14_4(orf name)|uniprotkb:Protein BRI1-EMS-SUPPRESSOR 1(gene name synonym)|uniprotkb:Protein BIN2 SUBSTRATE 1(gene name synonym)|uniprotkb:Protein 107(gene name synonym) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Yu et al. (2008) pubmed:18467490|imex:IM-9348 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0465"(DIP) intact:EBI-1798555|imex:IM-9348-2|dip:DIP-87877E - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_196044.2|dip:DIP-46102N|ensemblplants:AT5G04240(gene)|ensemblplants:AT5G04240.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0009741"(response to brassinosteroid)|go:"GO:0009826"(unidimensional cell growth)|go:"GO:0032452"(histone demethylase activity)|go:"GO:0033169"(histone H3-K9 demethylation)|go:"GO:0034647"(histone H3-tri/di/monomethyl-lysine-4 demethylase activity)|go:"GO:0046872"(metal ion binding)|go:"GO:0048577"(negative regulation of short-day photoperiodism, flowering)|go:"GO:0048579"(negative regulation of long-day photoperiodism, flowering)|go:"GO:0051213"(dioxygenase activity)|interpro:IPR003347(Transcription factor jumonji/aspartyl beta-hydroxylase)|interpro:IPR003349(Transcription factor jumonji, JmjN)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236 ensemblplants:AT1G19350(gene)|ensemblplants:AT1G19350.1(transcript)|ensemblplants:AT1G19350.4(transcript)|ensemblplants:AT1G19350.5(transcript)|ensemblplants:AT1G19350.6(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0009742"(brassinosteroid mediated signaling pathway)|go:"GO:0071367"(cellular response to brassinosteroid stimulus)|go:"GO:1904961"(quiescent center organization)|interpro:IPR008540(BZR1, transcriptional repressor)|interpro:IPR033264|refseq:NP_001077562.1|refseq:NP_564081.1|refseq:NP_973864.1|refseq:NP_973865.1|dip:DIP-34780N go:"GO:0005634"(nucleus)|psi-mi:"MI:0465"(dip) - - figure legend:Figure 3|comment:the proteins interacted in the nucleus.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-leaf)|taxid:3702(Arabidopsis thaliana leaf) - 2008/08/05 2017/06/30 rogid:GRHZfM9TV/TPZowhD5xOoh2PRsQ3702 rogid:eYK77tz47svwh8B60LOwW+F36rI3702 intact-crc:704AA0FFB6733847|rigid:DB35XHWA6d6EacRseEZTGy0CM4k false yellow fluorescent protein tag:n-n yellow fluorescent protein tag:c-c|necessary binding region:1-42 - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence)