#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q9M0V3 uniprotkb:Q8LGH4 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-541750|uniprotkb:Q84LL5|uniprotkb:Q8RWT9|uniprotkb:Q9FGP0|ensemblplants:AT5G46210.1 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:cul4_arath(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:"MI:0018"(two hybrid) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2028457|imex:IM-20162-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 ensemblplants:AT5G46210(gene)|ensemblplants:AT5G46210.1(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009908"(flower development)|go:"GO:0010100"(negative regulation of photomorphogenesis)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0048575"(short-day photoperiodism, flowering)|go:"GO:0048825"(cotyledon development)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|refseq:NP_568658.1|dip:DIP-40462N - - - figure legend:Figure 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/11/05 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 intact-crc:369AB3C2D95D206A|rigid:AECC7iEhOo2e4vvyaX7yISdBWa8 false - necessary binding region:1-304 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9M0V3 uniprotkb:Q8LGH4 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-541750|uniprotkb:Q84LL5|uniprotkb:Q8RWT9|uniprotkb:Q9FGP0|ensemblplants:AT5G46210.1 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:cul4_arath(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:"MI:0018"(two hybrid) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2028503|imex:IM-20162-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 ensemblplants:AT5G46210(gene)|ensemblplants:AT5G46210.1(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009908"(flower development)|go:"GO:0010100"(negative regulation of photomorphogenesis)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0048575"(short-day photoperiodism, flowering)|go:"GO:0048825"(cotyledon development)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|refseq:NP_568658.1|dip:DIP-40462N - - - figure legend:Figure 1b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/11/05 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 intact-crc:D179968097EE2E31|rigid:AECC7iEhOo2e4vvyaX7yISdBWa8 false necessary binding region:300-666 - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q940X7 uniprotkb:Q8LGH4-PRO_0000396851 intact:EBI-532404|ensemblplants:AT5G20570.1 intact:EBI-3292898|intact:EBI-1632927 psi-mi:rbx1a_arath(display_long)|uniprotkb:ROC1(gene name synonym)|uniprotkb:RBX1a-At(gene name synonym)|uniprotkb:At-Rbx1;1(gene name synonym)|uniprotkb:RBX1-2(gene name synonym)|uniprotkb:Protein RING of cullins 1(gene name synonym)|uniprotkb:RBX1A(gene name)|psi-mi:RBX1A(display_short)|uniprotkb:At5g20570(locus name)|uniprotkb:F7C8.160(orf name) psi-mi:q8lgh4-pro_0000396851(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:"MI:0018"(two hybrid) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2028610|imex:IM-20162-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_568396.1|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR024766|ensemblplants:AT5G20570(gene)|ensemblplants:AT5G20570.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0097602"(cullin family protein binding) intact:EBI-541750(chain-parent) - - chain-seq-start:1|chain-seq-end:792 figure legend:Figure 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/11/05 2014/10/16 rogid:HUlWYt26MsrNHGfz6HDy+gCxJng3702 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 intact-crc:07A27179A102C72B|rigid:Nq2lcWvK0d17uVJYTuVyfWwGeLE false - necessary binding region:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9ZVH4 uniprotkb:Q940X7 intact:EBI-531362|uniprotkb:Q0WL17|uniprotkb:Q7Y1Y8|ensemblplants:AT1G26830.1 intact:EBI-532404|ensemblplants:AT5G20570.1 psi-mi:cul3a_arath(display_long)|uniprotkb:CUL3A(gene name)|psi-mi:CUL3A(display_short)|uniprotkb:T2P11.2(orf name)|uniprotkb:CUL3(gene name synonym)|uniprotkb:At1g26830(locus name) psi-mi:rbx1a_arath(display_long)|uniprotkb:ROC1(gene name synonym)|uniprotkb:RBX1a-At(gene name synonym)|uniprotkb:At-Rbx1;1(gene name synonym)|uniprotkb:RBX1-2(gene name synonym)|uniprotkb:Protein RING of cullins 1(gene name synonym)|uniprotkb:RBX1A(gene name)|psi-mi:RBX1A(display_short)|uniprotkb:At5g20570(locus name)|uniprotkb:F7C8.160(orf name) psi-mi:"MI:0018"(two hybrid) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2028621|imex:IM-20162-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_174005.1|ensemblplants:AT1G26830(gene)|ensemblplants:AT1G26830.1(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009639"(response to red or far red light)|go:"GO:0009911"(positive regulation of flower development)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|dip:DIP-33568N refseq:NP_568396.1|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR024766|ensemblplants:AT5G20570(gene)|ensemblplants:AT5G20570.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0097602"(cullin family protein binding) - - - figure legend:Figure 1a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/11/05 2014/10/16 rogid:RLT/faXiiw4HUAgDB7dyG7mDTI03702 rogid:HUlWYt26MsrNHGfz6HDy+gCxJng3702 intact-crc:27EE2E547FA37F33|rigid:18C9KUqCvGDQwrhJXRZ+5oBrLrc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P48732 uniprotkb:Q9M0V3 intact:EBI-2028888|uniprotkb:Q66GQ4|ensemblplants:AT4G10180.1 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:det1_arath(display_long)|uniprotkb:DET1(gene name)|psi-mi:DET1(display_short)|uniprotkb:Protein DEETIOLATED 1(gene name synonym)|uniprotkb:T9A4.13(orf name)|uniprotkb:F28M11.100(orf name)|uniprotkb:At4g10180(locus name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0018"(two hybrid) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2028826|imex:IM-20162-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_192756.2|interpro:IPR008928(Six-hairpin glycosidase-like)|interpro:IPR019138|ensemblplants:AT4G10180(gene)|ensemblplants:AT4G10180.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005975"(carbohydrate metabolic process)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032436"(positive regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:1990756"(ubiquitin ligase-substrate adaptor activity) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 3a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/11/05 2014/10/16 rogid:5anymPPgtg6ib/P1bT3qB5FXtM83702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:C7C3E9B122FD4C62|rigid:rTQmn44oEe6MikZiXQvd8P4EbHs false - sufficient binding region:1-299|sufficient binding region:667-1088 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q6NQ88 uniprotkb:Q9M0V3 intact:EBI-2028926|uniprotkb:Q9LUY5|ensemblplants:AT5G58760.1 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:ddb2_arath(display_long)|uniprotkb:DDB2(gene name)|psi-mi:DDB2(display_short)|uniprotkb:UV-damaged DNA-binding protein 2(gene name synonym)|uniprotkb:MZN1.20(orf name)|uniprotkb:At5g58760(locus name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0018"(two hybrid) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2028958|imex:IM-20162-11 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_200684.2|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR033312|interpro:IPR036322|ensemblplants:AT5G58760(gene)|ensemblplants:AT5G58760.1(transcript)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006281"(DNA repair)|go:"GO:0009411"(response to UV)|go:"GO:0010224"(response to UV-B)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0046872"(metal ion binding)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 3b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/11/05 2014/10/16 rogid:eU9MQnbMAatk0LzGpgmcK0dLWLg3702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:DE5EA0E102A4FCE4|rigid:aSATlgxNZGcXhxM2beP9WdUsk6M false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q8LGH4 uniprotkb:Q9M0V3 intact:EBI-541750|uniprotkb:Q84LL5|uniprotkb:Q8RWT9|uniprotkb:Q9FGP0|ensemblplants:AT5G46210.1 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:cul4_arath(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0096"(pull down) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2028541|imex:IM-20162-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G46210(gene)|ensemblplants:AT5G46210.1(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009908"(flower development)|go:"GO:0010100"(negative regulation of photomorphogenesis)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0048575"(short-day photoperiodism, flowering)|go:"GO:0048825"(cotyledon development)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|refseq:NP_568658.1|dip:DIP-40462N dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 2c Figure 2d|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/11/05 2014/10/16 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:8C73DF1F65DC90E5|rigid:AECC7iEhOo2e4vvyaX7yISdBWa8 false necessary binding region:1-453|glutathione s tranferase tag:?-? 35s radiolabel:?-?|sufficient binding region:300-666 - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) uniprotkb:Q8LGH4 uniprotkb:Q9M0V3 intact:EBI-541750|uniprotkb:Q84LL5|uniprotkb:Q8RWT9|uniprotkb:Q9FGP0|ensemblplants:AT5G46210.1 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:cul4_arath(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0096"(pull down) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2028564|imex:IM-20162-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G46210(gene)|ensemblplants:AT5G46210.1(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009908"(flower development)|go:"GO:0010100"(negative regulation of photomorphogenesis)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0048575"(short-day photoperiodism, flowering)|go:"GO:0048825"(cotyledon development)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|refseq:NP_568658.1|dip:DIP-40462N dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 2e|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/11/05 2014/10/16 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:B9DD2C4EBFFFC8D9|rigid:AECC7iEhOo2e4vvyaX7yISdBWa8 false necessary binding region:1-453|35s radiolabel:?-? glutathione s tranferase tag:?-?|sufficient binding region:300-666 - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) uniprotkb:O49552 uniprotkb:Q8LGH4 intact:EBI-2028462|uniprotkb:Q0WML4|uniprotkb:Q570Q9|ensemblplants:AT4G21100.1 intact:EBI-541750|uniprotkb:Q84LL5|uniprotkb:Q8RWT9|uniprotkb:Q9FGP0|ensemblplants:AT5G46210.1 psi-mi:ddb1b_arath(display_long)|uniprotkb:DDB1B(gene name)|psi-mi:DDB1B(display_short)|uniprotkb:UV-damaged DNA-binding protein 1b(gene name synonym)|uniprotkb:F7J7.40(orf name)|uniprotkb:At4g21100(locus name) psi-mi:cul4_arath(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:"MI:0096"(pull down) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2028590|imex:IM-20162-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_193842.1|dip:DIP-46981N|ensemblplants:AT4G21100(gene)|ensemblplants:AT4G21100.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0016567"(protein ubiquitination)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 ensemblplants:AT5G46210(gene)|ensemblplants:AT5G46210.1(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009908"(flower development)|go:"GO:0010100"(negative regulation of photomorphogenesis)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0048575"(short-day photoperiodism, flowering)|go:"GO:0048825"(cotyledon development)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|refseq:NP_568658.1|dip:DIP-40462N - - - figure legend:Figure 2f|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/11/05 2014/10/16 rogid:lQmr2slvoBv8C57c9RDv63P1JYs3702 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 intact-crc:90BEDE93D3C7F55E|rigid:VaTYi4PaLTIOBFUc8p5bjGKfB7k false glutathione s tranferase tag:?-?|sufficient binding region:300-694 35s radiolabel:?-? - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) uniprotkb:Q8LGH4 uniprotkb:Q9M0V3 intact:EBI-541750|uniprotkb:Q84LL5|uniprotkb:Q8RWT9|uniprotkb:Q9FGP0|ensemblplants:AT5G46210.1 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:cul4_arath(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0096"(pull down) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2028705|imex:IM-20162-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G46210(gene)|ensemblplants:AT5G46210.1(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009908"(flower development)|go:"GO:0010100"(negative regulation of photomorphogenesis)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0048575"(short-day photoperiodism, flowering)|go:"GO:0048825"(cotyledon development)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|refseq:NP_568658.1|dip:DIP-40462N dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 2g|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/11/05 2014/10/16 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:8C3D8151DEE6B6FD|rigid:AECC7iEhOo2e4vvyaX7yISdBWa8 false - glutathione s tranferase tag:?-?|sufficient binding region:300-666 - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9M0V3 uniprotkb:Q8LGH4 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-541750|uniprotkb:Q84LL5|uniprotkb:Q8RWT9|uniprotkb:Q9FGP0|ensemblplants:AT5G46210.1 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:cul4_arath(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:"MI:0096"(pull down) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2028725|imex:IM-20162-9 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 ensemblplants:AT5G46210(gene)|ensemblplants:AT5G46210.1(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009908"(flower development)|go:"GO:0010100"(negative regulation of photomorphogenesis)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0048575"(short-day photoperiodism, flowering)|go:"GO:0048825"(cotyledon development)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|refseq:NP_568658.1|dip:DIP-40462N - - - figure legend:Figure 2i|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/11/05 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 intact-crc:674680EA9F9DCCF6|rigid:AECC7iEhOo2e4vvyaX7yISdBWa8 false myc tag:?-? necessary binding region:1-453|glutathione s tranferase tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q8LGH4 uniprotkb:Q9ZNU6 intact:EBI-541750|uniprotkb:Q84LL5|uniprotkb:Q8RWT9|uniprotkb:Q9FGP0|ensemblplants:AT5G46210.1 intact:EBI-2029363|ensemblplants:Solyc01g056340.3.1 psi-mi:cul4_arath(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:det1_sollc(display_long)|uniprotkb:DET1(gene name)|psi-mi:DET1(display_short)|uniprotkb:dg(gene name synonym)|uniprotkb:hp2(gene name synonym)|uniprotkb:Deetiolated1 homolog(gene name synonym)|uniprotkb:tDET1(gene name synonym)|uniprotkb:High pigmentation protein 2(gene name synonym)|uniprotkb:Protein dark green(gene name synonym) psi-mi:"MI:0096"(pull down) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:4081(sollc)|taxid:4081("Solanum lycopersicum (Tomato)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2029384|imex:IM-20162-12 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G46210(gene)|ensemblplants:AT5G46210.1(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009908"(flower development)|go:"GO:0010100"(negative regulation of photomorphogenesis)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0048575"(short-day photoperiodism, flowering)|go:"GO:0048825"(cotyledon development)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|refseq:NP_568658.1|dip:DIP-40462N refseq:NP_001234148.1|interpro:IPR019138|interpro:IPR008928(Six-hairpin glycosidase-like)|ensemblplants:Solyc01g056340.3.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005975"(carbohydrate metabolic process)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032436"(positive regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:1990756"(ubiquitin ligase-substrate adaptor activity)|ensemblplants:Solyc01g056340.3(gene) - - - figure legend:Figure 3d|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/11/05 2014/10/16 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 rogid:gmlaouZJ/xkkQTIhQi0dhsRPdMk4081 intact-crc:029605A855593F23|rigid:tWOfW0bKBmIXc67R0hLaM0Z3Xns false necessary binding region:1-453|glutathione s tranferase tag:?-? myc tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q9ZNU6 uniprotkb:Q940X7 intact:EBI-2029363|ensemblplants:Solyc01g056340.3.1 intact:EBI-532404|ensemblplants:AT5G20570.1 psi-mi:det1_sollc(display_long)|uniprotkb:DET1(gene name)|psi-mi:DET1(display_short)|uniprotkb:dg(gene name synonym)|uniprotkb:hp2(gene name synonym)|uniprotkb:Deetiolated1 homolog(gene name synonym)|uniprotkb:tDET1(gene name synonym)|uniprotkb:High pigmentation protein 2(gene name synonym)|uniprotkb:Protein dark green(gene name synonym) psi-mi:rbx1a_arath(display_long)|uniprotkb:ROC1(gene name synonym)|uniprotkb:RBX1a-At(gene name synonym)|uniprotkb:At-Rbx1;1(gene name synonym)|uniprotkb:RBX1-2(gene name synonym)|uniprotkb:Protein RING of cullins 1(gene name synonym)|uniprotkb:RBX1A(gene name)|psi-mi:RBX1A(display_short)|uniprotkb:At5g20570(locus name)|uniprotkb:F7C8.160(orf name) psi-mi:"MI:0096"(pull down) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:4081(sollc)|taxid:4081("Solanum lycopersicum (Tomato)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2029444|imex:IM-20162-13 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001234148.1|interpro:IPR019138|interpro:IPR008928(Six-hairpin glycosidase-like)|ensemblplants:Solyc01g056340.3.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005975"(carbohydrate metabolic process)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032436"(positive regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:1990756"(ubiquitin ligase-substrate adaptor activity)|ensemblplants:Solyc01g056340.3(gene) refseq:NP_568396.1|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR024766|ensemblplants:AT5G20570(gene)|ensemblplants:AT5G20570.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0097602"(cullin family protein binding) - - - figure legend:Figure 3d|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/11/05 2014/10/16 rogid:gmlaouZJ/xkkQTIhQi0dhsRPdMk4081 rogid:HUlWYt26MsrNHGfz6HDy+gCxJng3702 intact-crc:4FF42BA7E1826129|rigid:SEYvsAB/CyegRoR5erZbnijnX5w false myc tag:?-? glutathione s tranferase tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q8LGH4 uniprotkb:Q9ZNU6 intact:EBI-541750|uniprotkb:Q84LL5|uniprotkb:Q8RWT9|uniprotkb:Q9FGP0|ensemblplants:AT5G46210.1 intact:EBI-2029363|ensemblplants:Solyc01g056340.3.1 psi-mi:cul4_arath(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:det1_sollc(display_long)|uniprotkb:DET1(gene name)|psi-mi:DET1(display_short)|uniprotkb:dg(gene name synonym)|uniprotkb:hp2(gene name synonym)|uniprotkb:Deetiolated1 homolog(gene name synonym)|uniprotkb:tDET1(gene name synonym)|uniprotkb:High pigmentation protein 2(gene name synonym)|uniprotkb:Protein dark green(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bernhardt et al. (2006) pubmed:16792691|imex:IM-20162 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:4081(sollc)|taxid:4081("Solanum lycopersicum (Tomato)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2029723|imex:IM-20162-14 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G46210(gene)|ensemblplants:AT5G46210.1(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009908"(flower development)|go:"GO:0010100"(negative regulation of photomorphogenesis)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0048575"(short-day photoperiodism, flowering)|go:"GO:0048825"(cotyledon development)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|refseq:NP_568658.1|dip:DIP-40462N refseq:NP_001234148.1|interpro:IPR019138|interpro:IPR008928(Six-hairpin glycosidase-like)|ensemblplants:Solyc01g056340.3.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005975"(carbohydrate metabolic process)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032436"(positive regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:1990756"(ubiquitin ligase-substrate adaptor activity)|ensemblplants:Solyc01g056340.3(gene) - - - figure legend:Figure 3e|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2008/11/05 2014/10/16 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 rogid:gmlaouZJ/xkkQTIhQi0dhsRPdMk4081 intact-crc:2CA3D981E801D86F|rigid:tWOfW0bKBmIXc67R0hLaM0Z3Xns false - myc tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot)