#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q9Z0S9 uniprotkb:Q9JKS6 intact:EBI-476965|ensembl:ENSMUSP00000076227|uniprotkb:Q3TDB4 intact:EBI-2271602|uniprotkb:Q9JLT1 psi-mi:praf1_mouse(display_long)|uniprotkb:PRA1 family protein 1(gene name synonym)|uniprotkb:Prenylin(gene name synonym)|uniprotkb:Rabac1(gene name)|psi-mi:Rabac1(display_short)|uniprotkb:Pra(gene name synonym)|uniprotkb:Pra1(gene name synonym)|uniprotkb:Praf1(gene name synonym) psi-mi:pclo_rat(display_long)|uniprotkb:Pclo(gene name)|psi-mi:Pclo(display_short)|uniprotkb:Aczonin(gene name synonym)|uniprotkb:Multidomain presynaptic cytomatrix protein(gene name synonym) psi-mi:"MI:0018"(two hybrid) Fenster et al. (2000) pubmed:10707984 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2015311 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000003380(gene)|ensembl:ENSMUST00000076961(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0070064"(proline-rich region binding)|interpro:IPR004895(Prenylated rab acceptor PRA1)|refseq:NP_034391.1 rgd:69406|refseq:NP_001104267.1|refseq:NP_064483.1|interpro:IPR000008(C2 calcium-dependent membrane targeting)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR008899(Zinc finger, piccolo-type)|interpro:IPR042720|interpro:IPR030629|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q9JKS6|interpro:IPR035892|interpro:IPR036034|go:"GO:0001222"(transcription corepressor binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005522"(profilin binding)|go:"GO:0005544"(calcium-dependent phospholipid binding)|go:"GO:0005798"(Golgi-associated vesicle)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016080"(synaptic vesicle targeting)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019933"(cAMP-mediated signaling)|go:"GO:0030073"(insulin secretion)|go:"GO:0030133"(transport vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030426"(growth cone)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0035418"(protein localization to synapse)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0044316"(cone cell pedicle)|go:"GO:0044317"(rod spherule)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048788"(cytoskeleton of presynaptic active zone)|go:"GO:0050808"(synapse organization)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0060077"(inhibitory synapse)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0097470"(ribbon synapse)|go:"GO:0098688"(parallel fiber to Purkinje cell synapse)|go:"GO:0098815"(modulation of excitatory postsynaptic potential)|go:"GO:0098831"(presynaptic active zone cytoplasmic component)|go:"GO:0098882"(structural constituent of presynaptic active zone)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0099526"(presynapse to nucleus signaling pathway)|go:"GO:1903423"(positive regulation of synaptic vesicle recycling)|go:"GO:1904071"(presynaptic active zone assembly)|go:"GO:1904666"(regulation of ubiquitin protein ligase activity)|rcsb pdb:1RH8 - - - dataset:Synapse - Interactions of proteins with an established role in the presynapse. taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/10/20 2014/10/16 rogid:cBDA6mrObxTPZRfwXIJSP3YkNIc10090 rogid:OnCRNzqU4rxi3dXGZHJ6mRcuLKs10116 intact-crc:232FBB5EC323F96D|rigid:ozDnBHOUkl+7hmPlxq+HDwvAORU false - sufficient binding region:866-1122 - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q9Z0S9 uniprotkb:Q9JKS6 intact:EBI-476965|ensembl:ENSMUSP00000076227|uniprotkb:Q3TDB4 intact:EBI-2271602|uniprotkb:Q9JLT1 psi-mi:praf1_mouse(display_long)|uniprotkb:PRA1 family protein 1(gene name synonym)|uniprotkb:Prenylin(gene name synonym)|uniprotkb:Rabac1(gene name)|psi-mi:Rabac1(display_short)|uniprotkb:Pra(gene name synonym)|uniprotkb:Pra1(gene name synonym)|uniprotkb:Praf1(gene name synonym) psi-mi:pclo_rat(display_long)|uniprotkb:Pclo(gene name)|psi-mi:Pclo(display_short)|uniprotkb:Aczonin(gene name synonym)|uniprotkb:Multidomain presynaptic cytomatrix protein(gene name synonym) psi-mi:"MI:0018"(two hybrid) Fenster et al. (2000) pubmed:10707984 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2271409 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000003380(gene)|ensembl:ENSMUST00000076961(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0070064"(proline-rich region binding)|interpro:IPR004895(Prenylated rab acceptor PRA1)|refseq:NP_034391.1 rgd:69406|refseq:NP_001104267.1|refseq:NP_064483.1|interpro:IPR000008(C2 calcium-dependent membrane targeting)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR008899(Zinc finger, piccolo-type)|interpro:IPR042720|interpro:IPR030629|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q9JKS6|interpro:IPR035892|interpro:IPR036034|go:"GO:0001222"(transcription corepressor binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005522"(profilin binding)|go:"GO:0005544"(calcium-dependent phospholipid binding)|go:"GO:0005798"(Golgi-associated vesicle)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016080"(synaptic vesicle targeting)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019933"(cAMP-mediated signaling)|go:"GO:0030073"(insulin secretion)|go:"GO:0030133"(transport vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030426"(growth cone)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0035418"(protein localization to synapse)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0044316"(cone cell pedicle)|go:"GO:0044317"(rod spherule)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048788"(cytoskeleton of presynaptic active zone)|go:"GO:0050808"(synapse organization)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0060077"(inhibitory synapse)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0097470"(ribbon synapse)|go:"GO:0098688"(parallel fiber to Purkinje cell synapse)|go:"GO:0098815"(modulation of excitatory postsynaptic potential)|go:"GO:0098831"(presynaptic active zone cytoplasmic component)|go:"GO:0098882"(structural constituent of presynaptic active zone)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0099526"(presynapse to nucleus signaling pathway)|go:"GO:1903423"(positive regulation of synaptic vesicle recycling)|go:"GO:1904071"(presynaptic active zone assembly)|go:"GO:1904666"(regulation of ubiquitin protein ligase activity)|rcsb pdb:1RH8 - - - figure legend:5A|dataset:Synapse - Interactions of proteins with an established role in the presynapse. taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/10/20 2014/10/16 rogid:cBDA6mrObxTPZRfwXIJSP3YkNIc10090 rogid:OnCRNzqU4rxi3dXGZHJ6mRcuLKs10116 intact-crc:4C27AA8EDFB87917|rigid:ozDnBHOUkl+7hmPlxq+HDwvAORU false - sufficient binding region:866-1122 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47708 uniprotkb:P63011 intact:EBI-398376|ensembl:ENSMUSP00000078198|ensembl:ENSMUSP00000143917|ensembl:ENSMUSP00000144291 intact:EBI-398393|uniprotkb:P05713|uniprotkb:Q3TSL4|ensembl:ENSMUSP00000034301|ensembl:ENSMUSP00000105719|ensembl:ENSMUSP00000105720|ensembl:ENSMUSP00000105717 psi-mi:rp3a_mouse(display_long)|uniprotkb:Rph3a(gene name)|psi-mi:Rph3a(display_short)|uniprotkb:Exophilin-1(gene name synonym) psi-mi:rab3a_mouse(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:"MI:0018"(two hybrid) Fenster et al. (2000) pubmed:10707984 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10090(mouse)|taxid:10090(Mus musculus) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-2271428 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_035416.1|ensembl:ENSMUSG00000029608(gene)|ensembl:ENSMUST00000079204(transcript)|ensembl:ENSMUST00000202326(transcript)|ensembl:ENSMUST00000202406(transcript)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005544"(calcium-dependent phospholipid binding)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005829"(cytosol)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008430"(selenium binding)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042301"(phosphate ion binding)|go:"GO:0043005"(neuron projection)|go:"GO:0043197"(dendritic spine)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045202"(synapse)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0061669"(spontaneous neurotransmitter secretion)|go:"GO:0070679"(inositol 1,4,5 trisphosphate binding)|go:"GO:0097061"(dendritic spine organization)|go:"GO:0098850"(extrinsic component of synaptic vesicle membrane)|go:"GO:0098981"(cholinergic synapse)|go:"GO:2000310"(regulation of NMDA receptor activity)|interpro:IPR000008(C2 calcium-dependent membrane targeting)|interpro:IPR001565(Synaptotagmin)|interpro:IPR010911(Rab-binding)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR028698|interpro:IPR035892|interpro:IPR041282|interpro:IPR043566|mint:P47708|rcsb pdb:2K3H|refseq:NP_001289273.1|refseq:NP_001289274.1|go:"GO:0030141"(secretory granule) refseq:NP_001159871.1|refseq:NP_033027.1|ensembl:ENSMUSG00000031840(gene)|refseq:XP_006509666.1|refseq:NP_001314976.1|dip:DIP-31051N|ensembl:ENSMUST00000034301(transcript)|ensembl:ENSMUST00000110090(transcript)|ensembl:ENSMUST00000110092(transcript)|ensembl:ENSMUST00000110093(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0060203"(clathrin-sculpted glutamate transport vesicle membrane)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1900271"(regulation of long-term synaptic potentiation)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63011|reactome:R-MMU-181429|reactome:R-MMU-181430|reactome:R-MMU-210500|reactome:R-MMU-212676|reactome:R-MMU-264642|reactome:R-MMU-6798695|reactome:R-MMU-8873719|reactome:R-MMU-8876198|reactome:R-MMU-888590 - - - figure legend:5A|dataset:Synapse - Interactions of proteins with an established role in the presynapse. taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/10/20 2014/10/16 rogid:DQu/fNNUJTlaqFv34SIBVEw6sZk10090 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10090 intact-crc:61D4A515DE2D6D26|rigid:e4X70rLvpT45KawCLlr2TAajR84 false O4'-phospho-L-tyrosine:1-281 - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9Z0S9 uniprotkb:Q9JKS6 intact:EBI-476965|ensembl:ENSMUSP00000076227|uniprotkb:Q3TDB4 intact:EBI-2271602|uniprotkb:Q9JLT1 psi-mi:praf1_mouse(display_long)|uniprotkb:PRA1 family protein 1(gene name synonym)|uniprotkb:Prenylin(gene name synonym)|uniprotkb:Rabac1(gene name)|psi-mi:Rabac1(display_short)|uniprotkb:Pra(gene name synonym)|uniprotkb:Pra1(gene name synonym)|uniprotkb:Praf1(gene name synonym) psi-mi:pclo_rat(display_long)|uniprotkb:Pclo(gene name)|psi-mi:Pclo(display_short)|uniprotkb:Aczonin(gene name synonym)|uniprotkb:Multidomain presynaptic cytomatrix protein(gene name synonym) psi-mi:"MI:0047"(far western blotting) Fenster et al. (2000) pubmed:10707984 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2271481 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000003380(gene)|ensembl:ENSMUST00000076961(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0070064"(proline-rich region binding)|interpro:IPR004895(Prenylated rab acceptor PRA1)|refseq:NP_034391.1 rgd:69406|refseq:NP_001104267.1|refseq:NP_064483.1|interpro:IPR000008(C2 calcium-dependent membrane targeting)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR008899(Zinc finger, piccolo-type)|interpro:IPR042720|interpro:IPR030629|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q9JKS6|interpro:IPR035892|interpro:IPR036034|go:"GO:0001222"(transcription corepressor binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005522"(profilin binding)|go:"GO:0005544"(calcium-dependent phospholipid binding)|go:"GO:0005798"(Golgi-associated vesicle)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016080"(synaptic vesicle targeting)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019933"(cAMP-mediated signaling)|go:"GO:0030073"(insulin secretion)|go:"GO:0030133"(transport vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030426"(growth cone)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0035418"(protein localization to synapse)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0044316"(cone cell pedicle)|go:"GO:0044317"(rod spherule)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048788"(cytoskeleton of presynaptic active zone)|go:"GO:0050808"(synapse organization)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0060077"(inhibitory synapse)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0097470"(ribbon synapse)|go:"GO:0098688"(parallel fiber to Purkinje cell synapse)|go:"GO:0098815"(modulation of excitatory postsynaptic potential)|go:"GO:0098831"(presynaptic active zone cytoplasmic component)|go:"GO:0098882"(structural constituent of presynaptic active zone)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0099526"(presynapse to nucleus signaling pathway)|go:"GO:1903423"(positive regulation of synaptic vesicle recycling)|go:"GO:1904071"(presynaptic active zone assembly)|go:"GO:1904666"(regulation of ubiquitin protein ligase activity)|rcsb pdb:1RH8 - - - figure legend:5B|dataset:Synapse - Interactions of proteins with an established role in the presynapse. taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/10/20 2014/10/16 rogid:cBDA6mrObxTPZRfwXIJSP3YkNIc10090 rogid:OnCRNzqU4rxi3dXGZHJ6mRcuLKs10116 intact-crc:5B5696C4DAE9C42E|rigid:Y25cTXErDvydPjzZknJ40scrdG0 false glutathione s tranferase tag:?-? sufficient binding region:485-629|sufficient binding region:866-1122 - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q9Z0S9 uniprotkb:Q9UI14 intact:EBI-476965|ensembl:ENSMUSP00000076227|uniprotkb:Q3TDB4 intact:EBI-712367|ensembl:ENSP00000222008|uniprotkb:Q7Z4Y2|uniprotkb:Q9Y3R1 psi-mi:praf1_mouse(display_long)|uniprotkb:PRA1 family protein 1(gene name synonym)|uniprotkb:Prenylin(gene name synonym)|uniprotkb:Rabac1(gene name)|psi-mi:Rabac1(display_short)|uniprotkb:Pra(gene name synonym)|uniprotkb:Pra1(gene name synonym)|uniprotkb:Praf1(gene name synonym) psi-mi:praf1_human(display_long)|uniprotkb:PRA1 family protein 1(gene name synonym)|uniprotkb:RABAC1(gene name)|psi-mi:RABAC1(display_short)|uniprotkb:PRA1(gene name synonym)|uniprotkb:PRAF1(gene name synonym) psi-mi:"MI:0047"(far western blotting) Fenster et al. (2000) pubmed:10707984 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2271481 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000003380(gene)|ensembl:ENSMUST00000076961(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0070064"(proline-rich region binding)|interpro:IPR004895(Prenylated rab acceptor PRA1)|refseq:NP_034391.1 refseq:NP_006414.2|ensembl:ENSG00000105404(gene)|ensembl:ENST00000222008(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0070064"(proline-rich region binding)|interpro:IPR004895(Prenylated rab acceptor PRA1)|mint:Q9UI14 - - - figure legend:5B|dataset:Synapse - Interactions of proteins with an established role in the presynapse. taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/10/20 2014/10/16 rogid:cBDA6mrObxTPZRfwXIJSP3YkNIc10090 rogid:WS2rUY7yXRbR7pqWgfUCbnEiDbg9606 intact-crc:5B5696C4DAE9C42E|rigid:Y25cTXErDvydPjzZknJ40scrdG0 false glutathione s tranferase tag:?-? glutathione s tranferase tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q9Z0S9 uniprotkb:Q9JKS6 intact:EBI-476965|ensembl:ENSMUSP00000076227|uniprotkb:Q3TDB4 intact:EBI-2271602|uniprotkb:Q9JLT1 psi-mi:praf1_mouse(display_long)|uniprotkb:PRA1 family protein 1(gene name synonym)|uniprotkb:Prenylin(gene name synonym)|uniprotkb:Rabac1(gene name)|psi-mi:Rabac1(display_short)|uniprotkb:Pra(gene name synonym)|uniprotkb:Pra1(gene name synonym)|uniprotkb:Praf1(gene name synonym) psi-mi:pclo_rat(display_long)|uniprotkb:Pclo(gene name)|psi-mi:Pclo(display_short)|uniprotkb:Aczonin(gene name synonym)|uniprotkb:Multidomain presynaptic cytomatrix protein(gene name synonym) psi-mi:"MI:0411"(enzyme linked immunosorbent assay) Fenster et al. (2000) pubmed:10707984 taxid:10090(mouse)|taxid:10090(Mus musculus) taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2271501 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSMUSG00000003380(gene)|ensembl:ENSMUST00000076961(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0070064"(proline-rich region binding)|interpro:IPR004895(Prenylated rab acceptor PRA1)|refseq:NP_034391.1 rgd:69406|refseq:NP_001104267.1|refseq:NP_064483.1|interpro:IPR000008(C2 calcium-dependent membrane targeting)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR008899(Zinc finger, piccolo-type)|interpro:IPR042720|interpro:IPR030629|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q9JKS6|interpro:IPR035892|interpro:IPR036034|go:"GO:0001222"(transcription corepressor binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005522"(profilin binding)|go:"GO:0005544"(calcium-dependent phospholipid binding)|go:"GO:0005798"(Golgi-associated vesicle)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016080"(synaptic vesicle targeting)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019933"(cAMP-mediated signaling)|go:"GO:0030073"(insulin secretion)|go:"GO:0030133"(transport vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030426"(growth cone)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0035418"(protein localization to synapse)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0044316"(cone cell pedicle)|go:"GO:0044317"(rod spherule)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048788"(cytoskeleton of presynaptic active zone)|go:"GO:0050808"(synapse organization)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0060077"(inhibitory synapse)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0097470"(ribbon synapse)|go:"GO:0098688"(parallel fiber to Purkinje cell synapse)|go:"GO:0098815"(modulation of excitatory postsynaptic potential)|go:"GO:0098831"(presynaptic active zone cytoplasmic component)|go:"GO:0098882"(structural constituent of presynaptic active zone)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0099526"(presynapse to nucleus signaling pathway)|go:"GO:1903423"(positive regulation of synaptic vesicle recycling)|go:"GO:1904071"(presynaptic active zone assembly)|go:"GO:1904666"(regulation of ubiquitin protein ligase activity)|rcsb pdb:1RH8 - - - figure legend:5D|antagonist:Triton X-100|dataset:Synapse - Interactions of proteins with an established role in the presynapse. taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/10/20 2014/10/16 rogid:cBDA6mrObxTPZRfwXIJSP3YkNIc10090 rogid:OnCRNzqU4rxi3dXGZHJ6mRcuLKs10116 intact-crc:28AFA25F5504C6B1|rigid:ozDnBHOUkl+7hmPlxq+HDwvAORU false sufficient binding region:?-? sufficient binding region:866-1122|sufficient binding region:485-629 - - psi-mi:"MI:0421"(identification by antibody) psi-mi:"MI:0421"(identification by antibody) uniprotkb:O88778 uniprotkb:Q9JKS6 intact:EBI-2271660 intact:EBI-2271602|uniprotkb:Q9JLT1 psi-mi:bsn_rat(display_long)|uniprotkb:Bsn(gene name)|psi-mi:Bsn(display_short) psi-mi:pclo_rat(display_long)|uniprotkb:Pclo(gene name)|psi-mi:Pclo(display_short)|uniprotkb:Aczonin(gene name synonym)|uniprotkb:Multidomain presynaptic cytomatrix protein(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Fenster et al. (2000) pubmed:10707984 taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-2271685 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rgd:2223|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR008899(Zinc finger, piccolo-type)|interpro:IPR030627|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:O88778|go:"GO:0001222"(transcription corepressor binding)|go:"GO:0005798"(Golgi-associated vesicle)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008088"(axo-dendritic transport)|go:"GO:0008090"(retrograde axonal transport)|go:"GO:0009986"(cell surface)|go:"GO:0014069"(postsynaptic density)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0035418"(protein localization to synapse)|go:"GO:0043025"(neuronal cell body)|go:"GO:0044306"(neuron projection terminus)|go:"GO:0045202"(synapse)|go:"GO:0045503"(dynein light chain binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048788"(cytoskeleton of presynaptic active zone)|go:"GO:0050808"(synapse organization)|go:"GO:0060076"(excitatory synapse)|go:"GO:0060077"(inhibitory synapse)|go:"GO:0097470"(ribbon synapse)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098686"(hippocampal mossy fiber to CA3 synapse)|go:"GO:0098693"(regulation of synaptic vesicle cycle)|go:"GO:0098793"(presynapse)|go:"GO:0098831"(presynaptic active zone cytoplasmic component)|go:"GO:0098882"(structural constituent of presynaptic active zone)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0099526"(presynapse to nucleus signaling pathway)|go:"GO:1904071"(presynaptic active zone assembly)|go:"GO:1904115"(axon cytoplasm)|go:"GO:1904666"(regulation of ubiquitin protein ligase activity)|go:"GO:1990257"(piccolo-bassoon transport vesicle) rgd:69406|refseq:NP_001104267.1|refseq:NP_064483.1|interpro:IPR000008(C2 calcium-dependent membrane targeting)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR008899(Zinc finger, piccolo-type)|interpro:IPR042720|interpro:IPR030629|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q9JKS6|interpro:IPR035892|interpro:IPR036034|go:"GO:0001222"(transcription corepressor binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005522"(profilin binding)|go:"GO:0005544"(calcium-dependent phospholipid binding)|go:"GO:0005798"(Golgi-associated vesicle)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016080"(synaptic vesicle targeting)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019933"(cAMP-mediated signaling)|go:"GO:0030073"(insulin secretion)|go:"GO:0030133"(transport vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030426"(growth cone)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0035418"(protein localization to synapse)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0044316"(cone cell pedicle)|go:"GO:0044317"(rod spherule)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048788"(cytoskeleton of presynaptic active zone)|go:"GO:0050808"(synapse organization)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0060077"(inhibitory synapse)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0097470"(ribbon synapse)|go:"GO:0098688"(parallel fiber to Purkinje cell synapse)|go:"GO:0098815"(modulation of excitatory postsynaptic potential)|go:"GO:0098831"(presynaptic active zone cytoplasmic component)|go:"GO:0098882"(structural constituent of presynaptic active zone)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0099526"(presynapse to nucleus signaling pathway)|go:"GO:1903423"(positive regulation of synaptic vesicle recycling)|go:"GO:1904071"(presynaptic active zone assembly)|go:"GO:1904666"(regulation of ubiquitin protein ligase activity)|rcsb pdb:1RH8 - - - figure legend:4D, 4E, 4F|dataset:Synapse - Interactions of proteins with an established role in the presynapse. taxid:10116(rat-hippocampus)|taxid:10116(Rattus norvegicus hippocampal neurons) - 2008/10/20 2014/10/16 rogid:7wqEryp1iWbXnosW6KDHacbGxpc10116 rogid:OnCRNzqU4rxi3dXGZHJ6mRcuLKs10116 intact-crc:885D3E912A328055|rigid:I8rBbtczdkRDuXdy3gxhGuU5TIA false - - - - psi-mi:"MI:0422"(immunostaining) psi-mi:"MI:0422"(immunostaining) uniprotkb:P19490 uniprotkb:Q9JKS6 intact:EBI-371642 intact:EBI-2271602|uniprotkb:Q9JLT1 psi-mi:gria1_rat(display_long)|uniprotkb:Gria1(gene name)|psi-mi:Gria1(display_short)|uniprotkb:GluR-A(gene name synonym)|uniprotkb:GluR-K1(gene name synonym)|uniprotkb:Glutamate receptor ionotropic, AMPA 1(gene name synonym)|uniprotkb:AMPA-selective glutamate receptor 1(gene name synonym)|uniprotkb:Glur1(gene name synonym) psi-mi:pclo_rat(display_long)|uniprotkb:Pclo(gene name)|psi-mi:Pclo(display_short)|uniprotkb:Aczonin(gene name synonym)|uniprotkb:Multidomain presynaptic cytomatrix protein(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Fenster et al. (2000) pubmed:10707984 taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-2271690 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rgd:621531|refseq:NP_113796.1|go:"GO:0014069"(postsynaptic density)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0015276"(ligand-gated ion channel activity)|go:"GO:0016020"(membrane)|go:"GO:0019228"(neuronal action potential)|go:"GO:0019865"(immunoglobulin binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021510"(spinal cord development)|go:"GO:0030165"(PDZ domain binding)|go:"GO:0030425"(dendrite)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0031623"(receptor internalization)|go:"GO:0031681"(G-protein beta-subunit binding)|go:"GO:0031698"(beta-2 adrenergic receptor binding)|go:"GO:0031901"(early endosome membrane)|go:"GO:0032279"(asymmetric synapse)|go:"GO:0032281"(AMPA glutamate receptor complex)|go:"GO:0032355"(response to estradiol)|go:"GO:0032590"(dendrite membrane)|go:"GO:0032591"(dendritic spine membrane)|go:"GO:0032991"(protein-containing complex)|go:"GO:0035249"(synaptic transmission, glutamatergic)|go:"GO:0035254"(glutamate receptor binding)|go:"GO:0036477"(somatodendritic compartment)|go:"GO:0038023"(signaling receptor activity)|go:"GO:0042220"(response to cocaine)|go:"GO:0042493"|go:"GO:0042802"(identical protein binding)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0043198"(dendritic shaft)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0044297"(cell body)|go:"GO:0044308"(axonal spine)|go:"GO:0044309"(neuron spine)|go:"GO:0045202"(synapse)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0045838"(positive regulation of membrane potential)|go:"GO:0046685"(response to arsenic-containing substance)|go:"GO:0048167"(regulation of synaptic plasticity)|go:"GO:0050804"(modulation of chemical synaptic transmission)|go:"GO:0050806"(positive regulation of synaptic transmission)|go:"GO:0051018"(protein kinase A binding)|go:"GO:0051602"(response to electrical stimulus)|go:"GO:0055037"(recycling endosome)|go:"GO:0055038"(recycling endosome membrane)|go:"GO:0060076"(excitatory synapse)|go:"GO:0060078"(regulation of postsynaptic membrane potential)|go:"GO:0060292"(long-term synaptic depression)|go:"GO:0060992"(response to fungicide)|go:"GO:0071230"(cellular response to amino acid stimulus)|go:"GO:0071242"(cellular response to ammonium ion)|go:"GO:0071359"(cellular response to dsRNA)|go:"GO:0071363"(cellular response to growth factor stimulus)|go:"GO:0071375"(cellular response to peptide hormone stimulus)|go:"GO:0071407"(cellular response to organic cyclic compound)|go:"GO:0071418"(cellular response to amine stimulus)|go:"GO:0009636"(response to toxic substance)|go:"GO:0009986"(cell surface)|go:"GO:0010226"(response to lithium ion)|go:"GO:0097110"(scaffold protein binding)|go:"GO:0098794"(postsynapse)|go:"GO:0098839"(postsynaptic density membrane)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099055"(integral component of postsynaptic membrane)|go:"GO:0099056"(integral component of presynaptic membrane)|go:"GO:0099061"(integral component of postsynaptic density membrane)|go:"GO:0099544"(perisynaptic space)|go:"GO:0099583"(neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration)|go:"GO:1904315"(transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential)|interpro:IPR001320(Ionotropic glutamate receptor)|interpro:IPR001508(NMDA receptor)|interpro:IPR001828(Extracellular ligand-binding receptor)|interpro:IPR019594|interpro:IPR028082|rcsb pdb:2AWW|rcsb pdb:2G2L|rcsb pdb:3SAJ|go:"GO:0097060"(synaptic membrane)|rcsb pdb:6NJL|rcsb pdb:6NJN|rcsb pdb:6QKC|rcsb pdb:6QKZ|rcsb pdb:7OCA|rcsb pdb:7OCC|rcsb pdb:7OCD|rcsb pdb:7OCE|rcsb pdb:7OCF|reactome:R-RNO-204005|reactome:R-RNO-399710|reactome:R-RNO-399719|go:"GO:0001540"(amyloid-beta binding)|go:"GO:0001919"(regulation of receptor recycling)|go:"GO:0001965"(G-protein alpha-subunit binding)|go:"GO:0004970"(ionotropic glutamate receptor activity)|go:"GO:0004971"(AMPA glutamate receptor activity)|go:"GO:0005769"(early endosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0007616"(long-term memory)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008179"(adenylate cyclase binding)|go:"GO:0008328"(ionotropic glutamate receptor complex)|reactome:R-RNO-438066|reactome:R-RNO-5694530|reactome:R-RNO-8849932|reactome:R-RNO-416993|mint:P19490|dip:DIP-30929N rgd:69406|refseq:NP_001104267.1|refseq:NP_064483.1|interpro:IPR000008(C2 calcium-dependent membrane targeting)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR008899(Zinc finger, piccolo-type)|interpro:IPR042720|interpro:IPR030629|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q9JKS6|interpro:IPR035892|interpro:IPR036034|go:"GO:0001222"(transcription corepressor binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005522"(profilin binding)|go:"GO:0005544"(calcium-dependent phospholipid binding)|go:"GO:0005798"(Golgi-associated vesicle)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016080"(synaptic vesicle targeting)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019933"(cAMP-mediated signaling)|go:"GO:0030073"(insulin secretion)|go:"GO:0030133"(transport vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030426"(growth cone)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0035418"(protein localization to synapse)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0044316"(cone cell pedicle)|go:"GO:0044317"(rod spherule)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048788"(cytoskeleton of presynaptic active zone)|go:"GO:0050808"(synapse organization)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0060077"(inhibitory synapse)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0097470"(ribbon synapse)|go:"GO:0098688"(parallel fiber to Purkinje cell synapse)|go:"GO:0098815"(modulation of excitatory postsynaptic potential)|go:"GO:0098831"(presynaptic active zone cytoplasmic component)|go:"GO:0098882"(structural constituent of presynaptic active zone)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0099526"(presynapse to nucleus signaling pathway)|go:"GO:1903423"(positive regulation of synaptic vesicle recycling)|go:"GO:1904071"(presynaptic active zone assembly)|go:"GO:1904666"(regulation of ubiquitin protein ligase activity)|rcsb pdb:1RH8 - - - figure legend:4G, 4H, 4I|dataset:Synapse - Interactions of proteins with an established role in the presynapse. taxid:10116(rat-hippocampus)|taxid:10116(Rattus norvegicus hippocampal neurons) - 2008/10/20 2014/10/16 rogid:Bdkl7msqLXWZxd8172jZFghg6BI10116 rogid:OnCRNzqU4rxi3dXGZHJ6mRcuLKs10116 intact-crc:96341354647A2BC2|rigid:KauCPEmoFKhvbnGZtPQ29Pm8hFs false - - - - psi-mi:"MI:0422"(immunostaining) psi-mi:"MI:0422"(immunostaining) uniprotkb:O35394 uniprotkb:Q9JKS6 intact:EBI-2028510|ensembl:ENSRNOP00000027435 intact:EBI-2271602|uniprotkb:Q9JLT1 psi-mi:praf1_rat(display_long)|uniprotkb:Rabac1(gene name)|psi-mi:Rabac1(display_short)|uniprotkb:Pra1(gene name synonym)|uniprotkb:Praf1(gene name synonym)|uniprotkb:PRA1 family protein 1(gene name synonym) psi-mi:pclo_rat(display_long)|uniprotkb:Pclo(gene name)|psi-mi:Pclo(display_short)|uniprotkb:Aczonin(gene name synonym)|uniprotkb:Multidomain presynaptic cytomatrix protein(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Fenster et al. (2000) pubmed:10707984 taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-2271701 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rgd:621002|refseq:NP_113962.1|ensembl:ENSRNOG00000020233(gene)|ensembl:ENSRNOT00000027435(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0070064"(proline-rich region binding)|interpro:IPR004895(Prenylated rab acceptor PRA1) rgd:69406|refseq:NP_001104267.1|refseq:NP_064483.1|interpro:IPR000008(C2 calcium-dependent membrane targeting)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR008899(Zinc finger, piccolo-type)|interpro:IPR042720|interpro:IPR030629|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|mint:Q9JKS6|interpro:IPR035892|interpro:IPR036034|go:"GO:0001222"(transcription corepressor binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005522"(profilin binding)|go:"GO:0005544"(calcium-dependent phospholipid binding)|go:"GO:0005798"(Golgi-associated vesicle)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016080"(synaptic vesicle targeting)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019933"(cAMP-mediated signaling)|go:"GO:0030073"(insulin secretion)|go:"GO:0030133"(transport vesicle)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0030426"(growth cone)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0035418"(protein localization to synapse)|go:"GO:0043005"(neuron projection)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043195"(terminal bouton)|go:"GO:0044316"(cone cell pedicle)|go:"GO:0044317"(rod spherule)|go:"GO:0045202"(synapse)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048788"(cytoskeleton of presynaptic active zone)|go:"GO:0050808"(synapse organization)|go:"GO:0051036"(regulation of endosome size)|go:"GO:0060077"(inhibitory synapse)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0097470"(ribbon synapse)|go:"GO:0098688"(parallel fiber to Purkinje cell synapse)|go:"GO:0098815"(modulation of excitatory postsynaptic potential)|go:"GO:0098831"(presynaptic active zone cytoplasmic component)|go:"GO:0098882"(structural constituent of presynaptic active zone)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0098982"(GABA-ergic synapse)|go:"GO:0099526"(presynapse to nucleus signaling pathway)|go:"GO:1903423"(positive regulation of synaptic vesicle recycling)|go:"GO:1904071"(presynaptic active zone assembly)|go:"GO:1904666"(regulation of ubiquitin protein ligase activity)|rcsb pdb:1RH8 - - - figure legend:6A|dataset:Synapse - Interactions of proteins with an established role in the presynapse. taxid:10116(rat-hippocampus)|taxid:10116(Rattus norvegicus hippocampal neurons) - 2008/10/20 2014/10/16 rogid:OgO0luzXspcLJfubLYys5rgHZVY10116 rogid:OnCRNzqU4rxi3dXGZHJ6mRcuLKs10116 intact-crc:54CC171D9E5C94D9|rigid:/Qa6JCkAPO3MUlPc7CJBFZUAc3c false - - - - psi-mi:"MI:0422"(immunostaining) psi-mi:"MI:0422"(immunostaining) uniprotkb:P07825 uniprotkb:O35394 intact:EBI-976085|uniprotkb:Q499R3 intact:EBI-2028510|ensembl:ENSRNOP00000027435 psi-mi:syph_rat(display_long)|uniprotkb:Major synaptic vesicle protein p38(gene name synonym)|uniprotkb:Syp(gene name)|psi-mi:Syp(display_short) psi-mi:praf1_rat(display_long)|uniprotkb:Rabac1(gene name)|psi-mi:Rabac1(display_short)|uniprotkb:Pra1(gene name synonym)|uniprotkb:Praf1(gene name synonym)|uniprotkb:PRA1 family protein 1(gene name synonym) psi-mi:"MI:0029"(cosedimentation through density gradient) Fenster et al. (2000) pubmed:10707984 taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-2271783 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0030285"(integral component of synaptic vesicle membrane)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0060076"(excitatory synapse)|go:"GO:0032991"(protein-containing complex)|go:"GO:0071310"(cellular response to organic substance)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0042734"(presynaptic membrane)|go:"GO:1904645"(response to amyloid-beta)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|go:"GO:0042802"(identical protein binding)|go:"GO:0043005"(neuron projection)|go:"GO:0043195"(terminal bouton)|go:"GO:2000474"(regulation of opioid receptor signaling pathway)|go:"GO:0043229"(intracellular organelle)|go:"GO:0044306"(neuron projection terminus)|go:"GO:0044309"(neuron spine)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045202"(synapse)|go:"GO:0048168"(regulation of neuronal synaptic plasticity)|go:"GO:0000149"(SNARE binding)|go:"GO:0006897"(endocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015485"(cholesterol binding)|go:"GO:0016020"(membrane)|go:"GO:0017075"(syntaxin-1 binding)|go:"GO:0019904"(protein domain specific binding)|rgd:3802|refseq:NP_036796.1|interpro:IPR008253(Marvel)|interpro:IPR001285(Synaptophysin/synaptoporin)|interpro:IPR028714|mint:P07825 rgd:621002|refseq:NP_113962.1|ensembl:ENSRNOG00000020233(gene)|ensembl:ENSRNOT00000027435(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0070064"(proline-rich region binding)|interpro:IPR004895(Prenylated rab acceptor PRA1) - - - figure legend:6C|dataset:Synapse - Interactions of proteins with an established role in the presynapse. taxid:10116(rat-brain)|taxid:10116(Rattus norvegicus brain) - 2008/10/20 2014/10/16 rogid:nG9lA5IrA7dLVQ2QlJ7VhtruLLg10116 rogid:OgO0luzXspcLJfubLYys5rgHZVY10116 intact-crc:12F087E0EFE20850|rigid:jA9t4PjxnvHneDCbBvvUt1XXxfU false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P07825 uniprotkb:P63012 intact:EBI-976085|uniprotkb:Q499R3 intact:EBI-440126|ensembl:ENSRNOP00000026392|uniprotkb:P05713 psi-mi:syph_rat(display_long)|uniprotkb:Major synaptic vesicle protein p38(gene name synonym)|uniprotkb:Syp(gene name)|psi-mi:Syp(display_short) psi-mi:rab3a_rat(display_long)|uniprotkb:Rab3a(gene name)|psi-mi:Rab3a(display_short) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Fenster et al. (2000) pubmed:10707984 taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") psi-mi:"MI:0192"(acetylation reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2271805 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0030285"(integral component of synaptic vesicle membrane)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0060076"(excitatory synapse)|go:"GO:0032991"(protein-containing complex)|go:"GO:0071310"(cellular response to organic substance)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0042734"(presynaptic membrane)|go:"GO:1904645"(response to amyloid-beta)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|go:"GO:0042802"(identical protein binding)|go:"GO:0043005"(neuron projection)|go:"GO:0043195"(terminal bouton)|go:"GO:2000474"(regulation of opioid receptor signaling pathway)|go:"GO:0043229"(intracellular organelle)|go:"GO:0044306"(neuron projection terminus)|go:"GO:0044309"(neuron spine)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045202"(synapse)|go:"GO:0048168"(regulation of neuronal synaptic plasticity)|go:"GO:0000149"(SNARE binding)|go:"GO:0006897"(endocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015485"(cholesterol binding)|go:"GO:0016020"(membrane)|go:"GO:0017075"(syntaxin-1 binding)|go:"GO:0019904"(protein domain specific binding)|rgd:3802|refseq:NP_036796.1|interpro:IPR008253(Marvel)|interpro:IPR001285(Synaptophysin/synaptoporin)|interpro:IPR028714|mint:P07825 ensembl:ENSRNOT00000026391(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0001778"(plasma membrane repair)|go:"GO:0003016"(respiratory system process)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006887"(exocytosis)|go:"GO:0006904"(vesicle docking involved in exocytosis)|go:"GO:0007005"(mitochondrion organization)|go:"GO:0007274"(neuromuscular synaptic transmission)|go:"GO:0007409"(axonogenesis)|ensembl:ENSRNOG00000019433(gene)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009306"(protein secretion)|go:"GO:0009791"(post-embryonic development)|go:"GO:0010807"(regulation of synaptic vesicle priming)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016188"(synaptic vesicle maturation)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0030141"(secretory granule)|go:"GO:0030324"(lung development)|go:"GO:0030424"(axon)|go:"GO:0030742"(GTP-dependent protein binding)|go:"GO:0031489"(myosin V binding)|go:"GO:0031630"(regulation of synaptic vesicle fusion to presynaptic active zone membrane)|go:"GO:0032418"(lysosome localization)|go:"GO:0032482"(Rab protein signal transduction)|go:"GO:0032991"(protein-containing complex)|go:"GO:0036465"(synaptic vesicle recycling)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0048790"(maintenance of presynaptic active zone structure)|go:"GO:0050975"(sensory perception of touch)|go:"GO:0051021"(GDP-dissociation inhibitor binding)|go:"GO:0051117"(ATPase binding)|go:"GO:0060478"(acrosomal vesicle exocytosis)|go:"GO:0061670"(evoked neurotransmitter secretion)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:0097091"(synaptic vesicle clustering)|go:"GO:0098993"(anchored component of synaptic vesicle membrane)|go:"GO:1903307"(positive regulation of regulated secretory pathway)|go:"GO:1905684"(regulation of plasma membrane repair)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR001806(Ras GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037872|mint:P63012|rcsb pdb:1ZBD|rcsb pdb:3RAB|reactome:R-RNO-181429|reactome:R-RNO-181430|reactome:R-RNO-210500|reactome:R-RNO-212676|reactome:R-RNO-264642|reactome:R-RNO-6798695|reactome:R-RNO-8873719|reactome:R-RNO-8876198|reactome:R-RNO-888590|go:"GO:0051602"(response to electrical stimulus)|rgd:3528|refseq:NP_037150.2 - - - figure legend:6D|complex-properties:"In the bound fraction, PRA1 was affinity purified along with synaptophysin, rab3A and VAMP/Synaptobrevin II ( Figure 6D)."|dataset:Synapse - Interactions of proteins with an established role in the presynapse. taxid:10116(rat-brain)|taxid:10116(Rattus norvegicus brain) - 2008/10/20 2014/10/16 rogid:nG9lA5IrA7dLVQ2QlJ7VhtruLLg10116 rogid:Skrsn0x0LP/jAuOk1LQ4ataeiDA10116 intact-crc:81CF89A79DDD714C|rigid:r2bE0Q1mjxjl6GB5KYwOgMFayuA false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P07825 uniprotkb:O35394 intact:EBI-976085|uniprotkb:Q499R3 intact:EBI-2028510|ensembl:ENSRNOP00000027435 psi-mi:syph_rat(display_long)|uniprotkb:Major synaptic vesicle protein p38(gene name synonym)|uniprotkb:Syp(gene name)|psi-mi:Syp(display_short) psi-mi:praf1_rat(display_long)|uniprotkb:Rabac1(gene name)|psi-mi:Rabac1(display_short)|uniprotkb:Pra1(gene name synonym)|uniprotkb:Praf1(gene name synonym)|uniprotkb:PRA1 family protein 1(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Fenster et al. (2000) pubmed:10707984 taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") psi-mi:"MI:0192"(acetylation reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2271805 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0030285"(integral component of synaptic vesicle membrane)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0060076"(excitatory synapse)|go:"GO:0032991"(protein-containing complex)|go:"GO:0071310"(cellular response to organic substance)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0042734"(presynaptic membrane)|go:"GO:1904645"(response to amyloid-beta)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|go:"GO:0042802"(identical protein binding)|go:"GO:0043005"(neuron projection)|go:"GO:0043195"(terminal bouton)|go:"GO:2000474"(regulation of opioid receptor signaling pathway)|go:"GO:0043229"(intracellular organelle)|go:"GO:0044306"(neuron projection terminus)|go:"GO:0044309"(neuron spine)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045202"(synapse)|go:"GO:0048168"(regulation of neuronal synaptic plasticity)|go:"GO:0000149"(SNARE binding)|go:"GO:0006897"(endocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015485"(cholesterol binding)|go:"GO:0016020"(membrane)|go:"GO:0017075"(syntaxin-1 binding)|go:"GO:0019904"(protein domain specific binding)|rgd:3802|refseq:NP_036796.1|interpro:IPR008253(Marvel)|interpro:IPR001285(Synaptophysin/synaptoporin)|interpro:IPR028714|mint:P07825 rgd:621002|refseq:NP_113962.1|ensembl:ENSRNOG00000020233(gene)|ensembl:ENSRNOT00000027435(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0070064"(proline-rich region binding)|interpro:IPR004895(Prenylated rab acceptor PRA1) - - - figure legend:6D|complex-properties:"In the bound fraction, PRA1 was affinity purified along with synaptophysin, rab3A and VAMP/Synaptobrevin II ( Figure 6D)."|dataset:Synapse - Interactions of proteins with an established role in the presynapse. taxid:10116(rat-brain)|taxid:10116(Rattus norvegicus brain) - 2008/10/20 2014/10/16 rogid:nG9lA5IrA7dLVQ2QlJ7VhtruLLg10116 rogid:OgO0luzXspcLJfubLYys5rgHZVY10116 intact-crc:81CF89A79DDD714C|rigid:r2bE0Q1mjxjl6GB5KYwOgMFayuA false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P07825 uniprotkb:P63045 intact:EBI-976085|uniprotkb:Q499R3 intact:EBI-520880|uniprotkb:Q64357|intact:EBI-11701411|ensembl:ENSRNOP00000054114 psi-mi:syph_rat(display_long)|uniprotkb:Major synaptic vesicle protein p38(gene name synonym)|uniprotkb:Syp(gene name)|psi-mi:Syp(display_short) psi-mi:vamp2_rat(display_long)|uniprotkb:Vamp2(gene name)|psi-mi:Vamp2(display_short)|uniprotkb:Syb2(gene name synonym)|uniprotkb:Synaptobrevin-2(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Fenster et al. (2000) pubmed:10707984 taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)") psi-mi:"MI:0192"(acetylation reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-2271805 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0030285"(integral component of synaptic vesicle membrane)|go:"GO:0048169"(regulation of long-term neuronal synaptic plasticity)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0048172"(regulation of short-term neuronal synaptic plasticity)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0060076"(excitatory synapse)|go:"GO:0032991"(protein-containing complex)|go:"GO:0071310"(cellular response to organic substance)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0042734"(presynaptic membrane)|go:"GO:1904645"(response to amyloid-beta)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|go:"GO:0042802"(identical protein binding)|go:"GO:0043005"(neuron projection)|go:"GO:0043195"(terminal bouton)|go:"GO:2000474"(regulation of opioid receptor signaling pathway)|go:"GO:0043229"(intracellular organelle)|go:"GO:0044306"(neuron projection terminus)|go:"GO:0044309"(neuron spine)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045202"(synapse)|go:"GO:0048168"(regulation of neuronal synaptic plasticity)|go:"GO:0000149"(SNARE binding)|go:"GO:0006897"(endocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015485"(cholesterol binding)|go:"GO:0016020"(membrane)|go:"GO:0017075"(syntaxin-1 binding)|go:"GO:0019904"(protein domain specific binding)|rgd:3802|refseq:NP_036796.1|interpro:IPR008253(Marvel)|interpro:IPR001285(Synaptophysin/synaptoporin)|interpro:IPR028714|mint:P07825 rgd:3949|refseq:NP_036795.1|dip:DIP-35503N|ensembl:ENSRNOG00000006989(gene)|ensembl:ENSRNOT00000057295(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0000322"(storage vacuole)|go:"GO:0005484"(SNAP receptor activity)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0005886"(plasma membrane)|go:"GO:0006906"(vesicle fusion)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0009749"(response to glucose)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0016081"(synaptic vesicle docking)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0017022"(myosin binding)|go:"GO:0017075"(syntaxin-1 binding)|go:"GO:0017156"(calcium-ion regulated exocytosis)|go:"GO:0017157"(regulation of exocytosis)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030136"(clathrin-coated vesicle)|go:"GO:0030141"(secretory granule)|go:"GO:0030285"(integral component of synaptic vesicle membrane)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0031201"(SNARE complex)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031982"(vesicle)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0035493"(SNARE complex assembly)|go:"GO:0042589"(zymogen granule membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|go:"GO:0043005"(neuron projection)|go:"GO:0043195"(terminal bouton)|go:"GO:0043229"(intracellular organelle)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043308"(eosinophil degranulation)|go:"GO:0044306"(neuron projection terminus)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045055"(regulated exocytosis)|go:"GO:0045202"(synapse)|go:"GO:0046879"(hormone secretion)|go:"GO:0048306"(calcium-dependent protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0060291"(long-term synaptic potentiation)|go:"GO:0060627"(regulation of vesicle-mediated transport)|go:"GO:0061025"(membrane fusion)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0070032"(synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex)|go:"GO:0070033"(synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex)|go:"GO:0070044"(synaptobrevin 2-SNAP-25-syntaxin-1a complex)|go:"GO:0090316"(positive regulation of intracellular protein transport)|go:"GO:0098967"(exocytic insertion of neurotransmitter receptor to postsynaptic membrane)|go:"GO:1902259"(regulation of delayed rectifier potassium channel activity)|go:"GO:1903421"(regulation of synaptic vesicle recycling)|interpro:IPR001388(Synaptobrevin)|interpro:IPR016444(Synaptobrevin, metazoa/fungi)|interpro:IPR028717|interpro:IPR042855|mint:P63045|rcsb pdb:1KIL|rcsb pdb:1N7S|rcsb pdb:1SFC|rcsb pdb:2BU0|rcsb pdb:2KOG|rcsb pdb:2N1T|rcsb pdb:3HD7|rcsb pdb:3IPD|rcsb pdb:3J96|rcsb pdb:3J97|rcsb pdb:3J98|rcsb pdb:3J99|rcsb pdb:5CCG|rcsb pdb:5CCH|rcsb pdb:5CCI|rcsb pdb:5W5C|rcsb pdb:5W5D|rcsb pdb:6A30|rcsb pdb:6IP1|rcsb pdb:6MDM|rcsb pdb:6MDN|rcsb pdb:6MTI|rcsb pdb:6WVW|reactome:R-RNO-181429|reactome:R-RNO-181430|reactome:R-RNO-210500|reactome:R-RNO-212676|reactome:R-RNO-8856825|reactome:R-RNO-264642|reactome:R-RNO-432720|reactome:R-RNO-432722|reactome:R-RNO-449836|reactome:R-RNO-8856828|reactome:R-RNO-888590|reactome:R-RNO-9609523 - - - figure legend:6D|complex-properties:"In the bound fraction, PRA1 was affinity purified along with synaptophysin, rab3A and VAMP/Synaptobrevin II ( Figure 6D)."|dataset:Synapse - Interactions of proteins with an established role in the presynapse. taxid:10116(rat-brain)|taxid:10116(Rattus norvegicus brain) - 2008/10/20 2014/10/16 rogid:nG9lA5IrA7dLVQ2QlJ7VhtruLLg10116 rogid:7XvjYTyMU62KV/BKEItoUAtIL5010116 intact-crc:81CF89A79DDD714C|rigid:r2bE0Q1mjxjl6GB5KYwOgMFayuA false - - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot)