#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P53261 uniprotkb:P35271 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-16068|uniprotkb:D6VT75 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rs18_yeast(display_long)|uniprotkb:RPS18A(gene name)|psi-mi:RPS18A(display_short)|uniprotkb:YDR450W(locus name)|uniprotkb:D9461.35(orf name)|uniprotkb:RPS18B(gene name)|psi-mi:RPS18B(display_short)|uniprotkb:YML026C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000002858(RPS18A)|sgd:S000004488(RPS18B)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0006407"(rRNA export from nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|interpro:IPR001892(Ribosomal protein S13)|go:"GO:0019843"(rRNA binding)|rcsb pdb:1K5X|rcsb pdb:1S1H|go:"GO:0022627"(cytosolic small ribosomal subunit)|interpro:IPR018269|interpro:IPR010979(Ribosomal protein S13-like, H2TH)|rcsb pdb:3IZB|rcsb pdb:3O2Z|rcsb pdb:3O30|refseq:NP_010738.1|refseq:NP_013686.1 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:77WteX2OlMV7H0iViI4S6ZLjGgM559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:Q01855 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-16058|uniprotkb:D6W226|ensemblfungi:YOL040C psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rs15_yeast(display_long)|uniprotkb:RPS15(gene name)|psi-mi:RPS15(display_short)|uniprotkb:RPS21(gene name synonym)|uniprotkb:YOL040C(locus name)|uniprotkb:S21(gene name synonym)|uniprotkb:YS21(gene name synonym)|uniprotkb:RP52(gene name synonym)|uniprotkb:RIG protein(gene name synonym)|uniprotkb:Small ribosomal subunit protein uS19(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 rcsb pdb:7B7D|rcsb pdb:7NRC|rcsb pdb:7NRD|reactome:R-SCE-6791226|reactome:R-SCE-72649|rcsb pdb:6Q8Y|refseq:NP_014602.1|sgd:S000005400|interpro:IPR002222(Ribosomal protein S19/S15)|interpro:IPR020934|interpro:IPR023575|interpro:IPR005713(Ribosomal protein S15, eukaryotic/archaeal)|rcsb pdb:1K5X|rcsb pdb:6HHQ|reactome:R-SCE-1799339|reactome:R-SCE-156827|reactome:R-SCE-72689|reactome:R-SCE-72695|reactome:R-SCE-72702|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|ensemblfungi:YOL040C(gene)|ensemblfungi:YOL040C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006407"(rRNA export from nucleus)|go:"GO:0022627"(cytosolic small ribosomal subunit)|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:3J78|rcsb pdb:4U3M|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V4B|rcsb pdb:4V6I|rcsb pdb:4V7R|rcsb pdb:4V88|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:4V92|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5MEI|rcsb pdb:5TBW|rcsb pdb:5DGE|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5TGM|rcsb pdb:5DC3|rcsb pdb:5I4L|rcsb pdb:5DAT|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:5JUT|rcsb pdb:5JUU|rcsb pdb:5DGV|rcsb pdb:5LYB|rcsb pdb:5TGA|rcsb pdb:5ON6|rcsb pdb:6FAI|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:6EML|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6I7O|rcsb pdb:6RBD|rcsb pdb:6RBE|rcsb pdb:6S47|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6SNT|rcsb pdb:6SV4|rcsb pdb:6Y7C|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:6WDR|rcsb pdb:6WOO|rcsb pdb:6ZCE|rcsb pdb:6ZU9|rcsb pdb:6ZVI|rcsb pdb:7A1G - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:t9r3x/mQYocMgll6cfS3qnTLmjY559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P0CX31 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-16101|ensemblfungi:YER074W|ensemblfungi:YIL069C|uniprotkb:D3DLX9|uniprotkb:P26782 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rs24a_yeast(display_long)|uniprotkb:RPS24A(gene name)|psi-mi:RPS24A(display_short)|uniprotkb:RPS24EA(gene name synonym)|uniprotkb:RP50(gene name synonym)|uniprotkb:Small ribosomal subunit protein eS24-A(gene name synonym)|uniprotkb:YER074W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 rcsb pdb:7NRC|interpro:IPR018098|ensemblfungi:YER074W(gene)|ensemblfungi:YER074W_mRNA(transcript)|ensemblfungi:YIL069C(gene)|ensemblfungi:YIL069C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0022627"(cytosolic small ribosomal subunit)|interpro:IPR001976(Ribosomal protein S24e)|rcsb pdb:7B7D|rcsb pdb:7NRD|reactome:R-SCE-6791226|reactome:R-SCE-72649|sgd:S000000876|interpro:IPR012678(Ribosomal protein L23/L15e, core)|refseq:NP_012195.1|rcsb pdb:3J16|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:3J78|rcsb pdb:4U3M|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V6I|rcsb pdb:4V88|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:4V92|rcsb pdb:5DAT|rcsb pdb:5DC3|rcsb pdb:5DGE|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5I4L|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:5JUT|rcsb pdb:5JUU|rcsb pdb:5LL6|rcsb pdb:5LYB|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5MEI|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:5ON6|rcsb pdb:5TBW|rcsb pdb:5TGA|rcsb pdb:5TGM|rcsb pdb:5TZS|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6HHQ|rcsb pdb:6I7O|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6Q8Y|rcsb pdb:6RBD|rcsb pdb:6RBE|rcsb pdb:6S47|rcsb pdb:6SNT|rcsb pdb:6SV4|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6WDR|rcsb pdb:6WOO|rcsb pdb:6XIQ|rcsb pdb:6XIR|rcsb pdb:6Y7C|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:6ZCE|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:6ZU9|rcsb pdb:6ZVI|rcsb pdb:7A1G|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-156827|reactome:R-SCE-1799339|reactome:R-SCE-72689|reactome:R-SCE-72695|reactome:R-SCE-72702|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|refseq:NP_010997.3 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:NEiCPcsXMWCNzxsBl2NT1r+FtPg559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P05750 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-16140|ensemblfungi:YNL178W|uniprotkb:D6W107 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rs3_yeast(display_long)|uniprotkb:RPS3(gene name)|psi-mi:RPS3(display_short)|uniprotkb:SUF14(gene name synonym)|uniprotkb:YNL178W(locus name)|uniprotkb:N1653(orf name)|uniprotkb:YS3(gene name synonym)|uniprotkb:RP13(gene name synonym)|uniprotkb:Small ribosomal subunit protein uS3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V4B|rcsb pdb:4V6I|rcsb pdb:4V7R|rcsb pdb:4V88|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:4V92|rcsb pdb:5DAT|rcsb pdb:5DC3|rcsb pdb:5DGE|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5I4L|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:4U4O|rcsb pdb:5JUS|rcsb pdb:5JUT|go:"GO:0003723"(RNA binding)|ensemblfungi:YNL178W(gene)|ensemblfungi:YNL178W_mRNA(transcript)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0006407"(rRNA export from nucleus)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|interpro:IPR001351(Ribosomal protein S3, C-terminal)|interpro:IPR004044(K Homology, type 2)|interpro:IPR005703(Ribosomal protein S3, eukaryotic/archaeal)|interpro:IPR009019(K Homology, prokaryotic type)|interpro:IPR015946(K homology-like, alpha/beta)|interpro:IPR018280|interpro:IPR036419|rcsb pdb:1K5X|rcsb pdb:3J6X|rcsb pdb:3J6Y|go:"GO:0003735"(structural constituent of ribosome)|rcsb pdb:3J77|rcsb pdb:3J78|rcsb pdb:4BSZ|rcsb pdb:4U3M|go:"GO:0003906"("DNA-(apurinic or apyrimidinic site) endonuclease activity")|rcsb pdb:4U3N|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:5TGA|rcsb pdb:5TGM|rcsb pdb:6FAI|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6HHQ|rcsb pdb:6I7O|rcsb pdb:6Q8Y|rcsb pdb:6RBD|rcsb pdb:6RBE|rcsb pdb:6S47|rcsb pdb:6SNT|rcsb pdb:6SV4|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6WDR|rcsb pdb:6WOO|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:6ZCE|rcsb pdb:6ZU9|rcsb pdb:6ZVI|rcsb pdb:7A1G|rcsb pdb:7B7D|rcsb pdb:7NRC|rcsb pdb:7NRD|rcsb pdb:5JUU|rcsb pdb:5LYB|rcsb pdb:5M1J|reactome:R-SCE-156827|reactome:R-SCE-1799339|reactome:R-SCE-6791226|rcsb pdb:5MC6|rcsb pdb:5MEI|reactome:R-SCE-72649|reactome:R-SCE-72689|reactome:R-SCE-72695|reactome:R-SCE-72702|reactome:R-SCE-72706|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:5ON6|rcsb pdb:5TBW|reactome:R-SCE-975956|reactome:R-SCE-975957|sgd:S000005122|refseq:NP_014221.3|dip:DIP-4328N|mint:P05750 - crc64:131001C956787BE5 crc64:B85C0DFEB011745F figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:YHptcsJWWvurpkn2T5heik3EDi4559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P25443 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-16117|ensemblfungi:YGL123W|uniprotkb:D6VU25 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rs2_yeast(display_long)|uniprotkb:RPS2(gene name)|psi-mi:RPS2(display_short)|uniprotkb:SUP38(gene name synonym)|uniprotkb:SUP44(gene name synonym)|uniprotkb:YGL123W(locus name)|uniprotkb:G2893(orf name)|uniprotkb:RPS4(gene name synonym)|uniprotkb:S4(gene name synonym)|uniprotkb:YS5(gene name synonym)|uniprotkb:RP12(gene name synonym)|uniprotkb:Omnipotent suppressor protein SUP44(gene name synonym)|uniprotkb:Small ribosomal subunit protein uS5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 rcsb pdb:4V8Z|rcsb pdb:4V92|rcsb pdb:5DAT|rcsb pdb:5DC3|rcsb pdb:5DGE|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5I4L|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:5JUT|rcsb pdb:4V8Y|rcsb pdb:5JUU|rcsb pdb:5LL6|rcsb pdb:5LYB|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5MEI|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:5ON6|rcsb pdb:5TBW|rcsb pdb:5TGA|rcsb pdb:5TGM|rcsb pdb:6EML|rcsb pdb:6FAI|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6HHQ|rcsb pdb:6I7O|rcsb pdb:6Q8Y|rcsb pdb:6RBD|rcsb pdb:6RBE|rcsb pdb:6T83|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6WDR|rcsb pdb:6WOO|rcsb pdb:6Y7C|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:6ZCE|rcsb pdb:6ZU9|rcsb pdb:6ZVI|rcsb pdb:7A1G|rcsb pdb:7B7D|rcsb pdb:7NRC|rcsb pdb:7NRD|reactome:R-SCE-156827|reactome:R-SCE-1799339|rcsb pdb:6S47|rcsb pdb:6SNT|reactome:R-SCE-6791226|rcsb pdb:6SV4|rcsb pdb:6T4Q|reactome:R-SCE-72649|reactome:R-SCE-72689|rcsb pdb:6T7I|reactome:R-SCE-72695|reactome:R-SCE-72702|rcsb pdb:6T7T|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|ensemblfungi:YGL123W(gene)|ensemblfungi:YGL123W_mRNA(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0006407"(rRNA export from nucleus)|go:"GO:0006412"(translation)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0032040"(small-subunit processome)|go:"GO:0070181"(small ribosomal subunit rRNA binding)|rcsb pdb:1K5X|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:3J78|rcsb pdb:4U3M|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|go:"GO:0045903"(positive regulation of translational fidelity)|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V4B|rcsb pdb:4V6I|rcsb pdb:4V7R|rcsb pdb:4V88|refseq:NP_011392.1|sgd:S000003091|interpro:IPR000851(Ribosomal protein S5)|interpro:IPR005324(Ribosomal protein S5, C-terminal)|interpro:IPR020568|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR005711(Ribosomal protein S5, eukaryotic/archaeal)|interpro:IPR013810(Ribosomal protein S5, N-terminal)|interpro:IPR018192|mint:P25443 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:i8GXhV2/DqlpGhKBFdbP+U4JA7A559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P02365 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-16154|uniprotkb:P05751|uniprotkb:Q02894|uniprotkb:D6VQH5 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rs6_yeast(display_long)|uniprotkb:RPS6A(gene name)|psi-mi:RPS6A(display_short)|uniprotkb:RPS101(gene name synonym)|uniprotkb:RPS10B(gene name synonym)|uniprotkb:YPL090C(locus name)|uniprotkb:LPG18C(orf name)|uniprotkb:RPS6B(gene name)|psi-mi:RPS6B(display_short)|uniprotkb:RPS102(gene name synonym)|uniprotkb:RPS10A(gene name synonym)|uniprotkb:YBR181C(locus name)|uniprotkb:YBR1244(orf name)|uniprotkb:S10(gene name synonym)|uniprotkb:YS4(gene name synonym)|uniprotkb:RP9(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000006011(RPS6A)|sgd:S000000385(RPS6B)|go:"GO:0032040"(small-subunit processome)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|interpro:IPR001377(Ribosomal protein S6e)|cygd:YBR181c|cygd:YPL090c|interpro:IPR014401(Ribosomal protein S6, eukaryotic)|go:"GO:0030686"(90S preribosome)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|interpro:IPR018282|go:"GO:0005730"(nucleolus)|refseq:NP_009740.1|refseq:NP_015235.1 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:EeJ5VG5FWn5tAtQo5cEsiAM6K7k559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P05754 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-16170|uniprotkb:A2TBM0|uniprotkb:A2TBP0|uniprotkb:P22801|uniprotkb:D3DM09 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rs8_yeast(display_long)|uniprotkb:RPS8A(gene name)|psi-mi:RPS8A(display_short)|uniprotkb:YBL072C(locus name)|uniprotkb:YBL0613(orf name)|uniprotkb:YBL06.05(orf name)|uniprotkb:RPS8B(gene name)|psi-mi:RPS8B(display_short)|uniprotkb:YER102W(locus name)|uniprotkb:RPS14A(gene name synonym)|uniprotkb:RPS14B(gene name synonym)|uniprotkb:S14(gene name synonym)|uniprotkb:YS9(gene name synonym)|uniprotkb:RP19(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000000168(RPS8A)|sgd:S000000904(RPS8B)|go:"GO:0030686"(90S preribosome)|interpro:IPR001047(Ribosomal protein S8e)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0006412"(translation)|interpro:IPR018283|interpro:IPR022309|refseq:NP_009481.1|refseq:NP_011028.1 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:jRfjhbkl8RQB7y95ol7hZ3Ggj2Y559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P05753 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-16145|uniprotkb:D3DLF2 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rs4_yeast(display_long)|uniprotkb:RPS4A(gene name)|psi-mi:RPS4A(display_short)|uniprotkb:RPS7B(gene name synonym)|uniprotkb:YJR145C(locus name)|uniprotkb:J2186(orf name)|uniprotkb:RPS4B(gene name)|psi-mi:RPS4B(display_short)|uniprotkb:RPS7A(gene name synonym)|uniprotkb:YHR203C(locus name)|uniprotkb:S7(gene name synonym)|uniprotkb:YS6(gene name synonym)|uniprotkb:RP5(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000003906(RPS4A)|sgd:S000001246(RPS4B)|go:"GO:0030686"(90S preribosome)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|interpro:IPR005824(KOW)|interpro:IPR000876(Ribosomal protein S4e)|interpro:IPR002942(RNA-binding S4)|go:"GO:0019843"(rRNA binding)|interpro:IPR013845(Ribosomal protein S4e, central)|interpro:IPR013843(Ribosomal protein S4e, N-terminal)|interpro:IPR018199|rcsb pdb:3IZB|refseq:NP_012073.1|refseq:NP_012679.1 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:0/1PAh0d9haBkt8sGtOf/pKOorg559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P05756 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-16054|uniprotkb:D6VS50|ensemblfungi:YDR064W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rs13_yeast(display_long)|uniprotkb:RPS13(gene name)|psi-mi:RPS13(display_short)|uniprotkb:RPS13C(gene name synonym)|uniprotkb:YDR064W(locus name)|uniprotkb:YD9609.18(orf name)|uniprotkb:D4252(orf name)|uniprotkb:S27a(gene name synonym)|uniprotkb:YS15(gene name synonym)|uniprotkb:Small ribosomal subunit protein uS15(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 rcsb pdb:5MEI|rcsb pdb:5TBW|rcsb pdb:7B7D|rcsb pdb:7NRC|rcsb pdb:7NRD|reactome:R-SCE-6791226|reactome:R-SCE-72649|rcsb pdb:5LL6|rcsb pdb:6Q8Y|sgd:S000002471|interpro:IPR012606(Ribosomal protein S13/S15, N-terminal)|interpro:IPR000589(Ribosomal protein S15)|interpro:IPR023029|interpro:IPR009068(S15/NS1, RNA-binding)|rcsb pdb:1K5X|rcsb pdb:6HHQ|reactome:R-SCE-1799339|reactome:R-SCE-156827|reactome:R-SCE-72689|reactome:R-SCE-72695|reactome:R-SCE-72702|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|ensemblfungi:YDR064W(gene)|ensemblfungi:YDR064W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0022627"(cytosolic small ribosomal subunit)|go:"GO:0030686"(90S preribosome)|go:"GO:0070181"(small ribosomal subunit rRNA binding)|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:3J78|rcsb pdb:4U3M|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V4B|rcsb pdb:4V6I|rcsb pdb:4V7R|rcsb pdb:4V88|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:4V92|rcsb pdb:5FCI|rcsb pdb:5FCJ|refseq:NP_010349.3|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:5DGE|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5TGM|rcsb pdb:5DC3|rcsb pdb:5I4L|rcsb pdb:5DAT|rcsb pdb:5JPQ|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:5JUT|rcsb pdb:5JUU|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5LYB|rcsb pdb:5TGA|rcsb pdb:5ON6|rcsb pdb:6FAI|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:6EML|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6I7O|rcsb pdb:6RBD|rcsb pdb:6RBE|rcsb pdb:6S47|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6SNT|rcsb pdb:6SV4|rcsb pdb:6Y7C|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6KE6|rcsb pdb:6XIQ|rcsb pdb:6XIR|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:6ZVI|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6WDR|rcsb pdb:6WOO|rcsb pdb:6ZCE|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:6ZQF|rcsb pdb:6ZQG|rcsb pdb:6ZU9|rcsb pdb:7A1G|rcsb pdb:7AJT|rcsb pdb:7AJU - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:I3W28cYoyJBO5SDt8UkjpTBnQ5k559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P17079 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-15281|uniprotkb:P05741|uniprotkb:D3DLJ6|refseq:NP_010706|dip:DIP-2505N psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rl12_yeast(display_long)|uniprotkb:RPL12A(gene name)|psi-mi:RPL12A(display_short)|uniprotkb:RPL15B(gene name synonym)|uniprotkb:YEL054C(locus name)|uniprotkb:RPL12B(gene name)|psi-mi:RPL12B(display_short)|uniprotkb:RPL15A(gene name synonym)|uniprotkb:YDR418W(locus name)|uniprotkb:D9461.7(orf name)|uniprotkb:L15(gene name synonym)|uniprotkb:YL23(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000000780(RPL12A)|sgd:S000002826(RPL12B)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|interpro:IPR000911(Ribosomal protein L11)|go:"GO:0003723"(RNA binding)|cygd:YDR418w|cygd:YEL054c|rcsb pdb:1K5Y|rcsb pdb:1S1I|interpro:IPR020783|interpro:IPR020785|interpro:IPR020784|rcsb pdb:3IZS|rcsb pdb:3O5H|refseq:NP_010706.1|refseq:NP_010860.1|uniprotkb:P17079(uniprot-removed-ac) - crc64:131001C956787BE5 caution:This sequence has been withdrawn from Uniprot. figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:bNaqdK55jbcUM9AkaYxImMrFdkg559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P41805 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-15270|ensemblfungi:YLR075W|uniprotkb:D6VY76 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rl10_yeast(display_long)|uniprotkb:YLR075W(locus name)|uniprotkb:RPL10(gene name)|psi-mi:RPL10(display_short)|uniprotkb:GRC5(gene name synonym)|uniprotkb:QSR1(gene name synonym)|uniprotkb:L9(gene name synonym)|uniprotkb:Ubiquinol-cytochrome C reductase complex subunit VI-requiring protein(gene name synonym)|uniprotkb:Large ribosomal subunit protein uL16(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 ensemblfungi:YLR075W(gene)|ensemblfungi:YLR075W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006415"(translational termination)|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR001197(Ribosomal protein L10e)|interpro:IPR016180(Ribosomal protein L10e/L16)|interpro:IPR018255|interpro:IPR036920|rcsb pdb:1K5Y|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:3J78|rcsb pdb:4U3M|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|refseq:NP_013176.1|sgd:S000004065|rcsb pdb:5TGA|rcsb pdb:5TGM|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6HD7|rcsb pdb:6HHQ|rcsb pdb:6I7O|rcsb pdb:6N8O|rcsb pdb:6OIG|rcsb pdb:6Q8Y|rcsb pdb:6QT0|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6R86|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6S47|rcsb pdb:6SNT|rcsb pdb:6SV4|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V4B|rcsb pdb:4V6I|rcsb pdb:4V7R|rcsb pdb:4V88|rcsb pdb:4V8T|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:6T83|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6WOO|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:7AZY|rcsb pdb:7B7D|rcsb pdb:7NRC|rcsb pdb:7NRD|reactome:R-SCE-156827|reactome:R-SCE-1799339|reactome:R-SCE-72689|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|rcsb pdb:6T7T|rcsb pdb:4V91|rcsb pdb:4ZOX|rcsb pdb:5APN|rcsb pdb:5APO|rcsb pdb:5DAT|rcsb pdb:5DC3|rcsb pdb:5DGE|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5GAK|rcsb pdb:5I4L|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:5JUT|rcsb pdb:5JUU|rcsb pdb:5LYB|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5MEI|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:5ON6|rcsb pdb:5T62|rcsb pdb:5T6R|rcsb pdb:5TBW|dip:DIP-2507N|mint:P41805 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:oaJL7tfKjWOcGDvbpVWUQ71hr8Y559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P26321 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-15398|uniprotkb:D6W3N6|ensemblfungi:YPL131W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rl5_yeast(display_long)|uniprotkb:RPL1(gene name synonym)|uniprotkb:RPL1A(gene name synonym)|uniprotkb:RPL5(gene name)|psi-mi:RPL5(display_short)|uniprotkb:YPL131W(locus name)|uniprotkb:LPI14W(orf name)|uniprotkb:L1(gene name synonym)|uniprotkb:L1a(gene name synonym)|uniprotkb:YL3(gene name synonym)|uniprotkb:Ribosomal 5S RNA-binding protein(gene name synonym)|uniprotkb:Large ribosomal subunit protein uL18(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_015194.1|sgd:S000006052|rcsb pdb:5JCS|rcsb pdb:5OBM|rcsb pdb:5ON6|rcsb pdb:5T62|rcsb pdb:5JUO|rcsb pdb:5T6R|rcsb pdb:5TBW|rcsb pdb:5TGA|rcsb pdb:5TGM|rcsb pdb:6FT6|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:5JUP|rcsb pdb:6HD7|rcsb pdb:6HHQ|rcsb pdb:6I7O|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6N8M|rcsb pdb:6N8N|rcsb pdb:5JUS|rcsb pdb:6N8O|rcsb pdb:6OIG|rcsb pdb:6Q8Y|rcsb pdb:6QIK|rcsb pdb:6QT0|rcsb pdb:5JUT|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6R86|rcsb pdb:5JUU|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6RZZ|rcsb pdb:6S05|rcsb pdb:6S47|rcsb pdb:6SNT|rcsb pdb:6SV4|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6WOO|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:7AZY|rcsb pdb:7B7D|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:7NRC|rcsb pdb:7NRD|reactome:R-SCE-156827|reactome:R-SCE-1799339|reactome:R-SCE-72689|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|rcsb pdb:5LYB|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5MEI|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|ensemblfungi:YPL131W(gene)|ensemblfungi:YPL131W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR005485(Ribosomal protein L5, eukaryotic)|interpro:IPR025607|rcsb pdb:1K5Y|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:3J78|rcsb pdb:3JCT|rcsb pdb:4U3M|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V4B|rcsb pdb:4V6I|rcsb pdb:4V7F|rcsb pdb:4V7R|rcsb pdb:4V88|rcsb pdb:4V8T|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:4V91|rcsb pdb:5APN|rcsb pdb:5APO|rcsb pdb:5DAT|rcsb pdb:5DC3|rcsb pdb:5DGE|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5FL8|rcsb pdb:5GAK|rcsb pdb:5H4P|rcsb pdb:5I4L|dip:DIP-1790N|mint:P26321 - crc64:131001C956787BE5 crc64:14E3B2931C3CAE2B figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:kfPHA9QqN+B0uZ7fsxigahqU9CQ559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P14126 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-15364|uniprotkb:Q08459|uniprotkb:D6W2C6|ensemblfungi:YOR063W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rl3_yeast(display_long)|uniprotkb:MAK8(gene name synonym)|uniprotkb:RPL3(gene name)|psi-mi:RPL3(display_short)|uniprotkb:TCM1(gene name synonym)|uniprotkb:YOR063W(locus name)|uniprotkb:YOR29-14(orf name)|uniprotkb:YL1(gene name synonym)|uniprotkb:RP1(gene name synonym)|uniprotkb:Maintenance of killer protein 8(gene name synonym)|uniprotkb:Trichodermin resistance protein(gene name synonym)|uniprotkb:Large ribosomal subunit protein uL3(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_014706.1|sgd:S000005589|interpro:IPR000597(Ribosomal protein L3)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR019926|rcsb pdb:1K5Y|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:3J78|rcsb pdb:3JCT|rcsb pdb:4U3M|rcsb pdb:4U3N|go:"GO:1990145"(maintenance of translational fidelity)|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|ensemblfungi:YOR063W(gene)|ensemblfungi:YOR063W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0022625"(cytosolic large ribosomal subunit)|rcsb pdb:4U6F|rcsb pdb:4U56|rcsb pdb:4V4B|rcsb pdb:4V6I|rcsb pdb:4V7F|rcsb pdb:4V7R|rcsb pdb:4V88|rcsb pdb:4V8T|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:4V91|rcsb pdb:5APN|rcsb pdb:5APO|rcsb pdb:5DAT|rcsb pdb:5DC3|rcsb pdb:5DGE|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5FL8|rcsb pdb:5GAK|rcsb pdb:5H4P|rcsb pdb:5I4L|rcsb pdb:5JCS|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:5JUT|rcsb pdb:5JUU|rcsb pdb:5LYB|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5MEI|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:5ON6|rcsb pdb:5T62|rcsb pdb:5T6R|rcsb pdb:5TBW|rcsb pdb:5TGA|rcsb pdb:5TGM|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6EM1|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6HD7|rcsb pdb:6HHQ|rcsb pdb:6I7O|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6N8M|rcsb pdb:6R86|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6RZZ|rcsb pdb:6S05|rcsb pdb:6S47|rcsb pdb:6SNT|rcsb pdb:6SV4|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6WOO|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:7AZY|rcsb pdb:7B7D|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:7NRC|rcsb pdb:7NRD|reactome:R-SCE-156827|reactome:R-SCE-1799339|reactome:R-SCE-72689|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|rcsb pdb:6N8N|rcsb pdb:6N8O|rcsb pdb:6OIG|rcsb pdb:6Q8Y|rcsb pdb:6QIK|rcsb pdb:6QT0|dip:DIP-6264N|mint:P14126 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:cQmK1aAKV5F5UvYZOCVIzkjLZtY559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P05736 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-15328|uniprotkb:D6VTR2 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rl2_yeast(display_long)|uniprotkb:RPL2A(gene name)|psi-mi:RPL2A(display_short)|uniprotkb:RPL5B(gene name synonym)|uniprotkb:YFR031C-A(locus name)|uniprotkb:YFR031BC(orf name)|uniprotkb:RPL2B(gene name)|psi-mi:RPL2B(display_short)|uniprotkb:RPL5A(gene name synonym)|uniprotkb:YIL018W(locus name)|uniprotkb:L5(gene name synonym)|uniprotkb:YL6(gene name synonym)|uniprotkb:RP8(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000002104(RPL2A)|sgd:S000001280(RPL2B)|interpro:IPR002171(Ribosomal protein L2)|go:"GO:0019843"(rRNA binding)|rcsb pdb:1K5Y|rcsb pdb:1S1I|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR014726(Ribosomal protein L2, domain 3)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|interpro:IPR016027(Nucleic acid-binding, OB-fold-like)|interpro:IPR008991(Translation protein SH3-like)|rcsb pdb:3IZS|rcsb pdb:3O58|rcsb pdb:3O5H|interpro:IPR022666|interpro:IPR022669|interpro:IPR022671|interpro:IPR014722(Translation protein SH3-like, subgroup)|refseq:NP_012246.1|refseq:NP_116688.1 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:Vd6tppKd1wRDq/TUYF6RZv6Fh1k559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P53030 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-14442|uniprotkb:D6VU14 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rl1_yeast(display_long)|uniprotkb:RPL1A(gene name)|psi-mi:RPL1A(display_short)|uniprotkb:SSM1(gene name synonym)|uniprotkb:SSM1A(gene name synonym)|uniprotkb:YPL220W(locus name)|uniprotkb:RPL1B(gene name)|psi-mi:RPL1B(display_short)|uniprotkb:SSM1B(gene name synonym)|uniprotkb:SSM2(gene name synonym)|uniprotkb:YGL135W(locus name)|uniprotkb:G2834(orf name)|uniprotkb:L10a(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000006141(RPL1A)|sgd:S000003103(RPL1B)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|go:"GO:0003723"(RNA binding)|go:"GO:0006396"(RNA processing)|interpro:IPR002143(Ribosomal protein L1)|cygd:YGL135w|cygd:YPL220w|rcsb pdb:1K5Y|rcsb pdb:1S1I|rcsb pdb:2NOQ|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR016095(Ribosomal protein L1, 3-layer alpha/beta-sandwich)|rcsb pdb:3IZS|rcsb pdb:3O58|rcsb pdb:3O5H|interpro:IPR016094(Ribosomal protein L1, 2-layer alpha/beta-sandwich)|interpro:IPR023673|interpro:IPR023674|refseq:NP_011380.1|refseq:NP_015104.1 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:sf9JBY3xHeefyREd6rn7kA29dBo559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:Q12024 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-29589|uniprotkb:D6W2X2|ensemblfungi:YOR272W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:ytm1_yeast(display_long)|uniprotkb:YTM1(gene name)|psi-mi:YTM1(display_short)|uniprotkb:Microtubule-associated protein YTM1(gene name synonym)|uniprotkb:YOR272W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000005798|refseq:NP_014915.3|dip:DIP-6484N|mint:Q12024|ensemblfungi:YOR272W(gene)|ensemblfungi:YOR272W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0051276"(chromosome organization)|go:"GO:0070545"(PeBoW complex)|go:"GO:0110136"(protein-RNA complex remodeling)|interpro:IPR001680(WD40 repeat)|interpro:IPR012972(NLE)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR028599|interpro:IPR036322|rcsb pdb:5DTC|rcsb pdb:6ELZ|rcsb pdb:6EM5|reactome:R-SCE-6791226 - crc64:131001C956787BE5 crc64:DBC26738651433C4 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:PMUVUiAOfc1+6wTXaTnBswTOQqk559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P53261 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 - crc64:131001C956787BE5 crc64:131001C956787BE5 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P38779 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-24538|uniprotkb:D3DL01|ensemblfungi:YHR052W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:cic1_yeast(display_long)|uniprotkb:CIC1(gene name)|psi-mi:CIC1(display_short)|uniprotkb:NSA3(gene name synonym)|uniprotkb:Core interacting component 1(gene name synonym)|uniprotkb:YHR052W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_011919.1|sgd:S000001094|dip:DIP-6491N|mint:P38779|ensemblfungi:YHR052W(gene)|ensemblfungi:YHR052W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0000502"(proteasome complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030163"(protein catabolic process)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031118"(rRNA pseudouridine synthesis)|go:"GO:0031120"(snRNA pseudouridine synthesis)|go:"GO:0031429"(box H/ACA snoRNP complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070628"(proteasome binding)|interpro:IPR023674|interpro:IPR028364|interpro:IPR028365|rcsb pdb:3JCT|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|go:"GO:0034513"(box H/ACA snoRNA binding) - crc64:131001C956787BE5 crc64:13A2AFA0B927CD98 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:rdhoaLdCr+bDCy9BYwEA9foQFWQ559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P53927 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB - crc64:131001C956787BE5 crc64:EC86E3C77C863292 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P53136 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-23920|uniprotkb:D6VU36|ensemblfungi:YGL111W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:nsa1_yeast(display_long)|uniprotkb:YGL111W(locus name)|uniprotkb:G2990(orf name)|uniprotkb:NSA1(gene name)|psi-mi:NSA1(display_short)|uniprotkb:NOP7-associated protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_011404.1|sgd:S000003079|dip:DIP-6415N|mint:P53136|ensemblfungi:YGL111W(gene)|ensemblfungi:YGL111W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR036322|interpro:IPR037379|rcsb pdb:5SUI|rcsb pdb:5SUM|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6EN7 - crc64:131001C956787BE5 crc64:4BF4BECDBB689F1A figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:bsOyKc7/QyJ08BVrMeXpcUTkJwo559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P43586 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)") - crc64:131001C956787BE5 crc64:69970294E9C980F9 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P40078 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB - crc64:131001C956787BE5 crc64:545C8B4250BCB0C9 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P35178 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-16002|uniprotkb:D6VS74|ensemblfungi:YDR087C psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rrp1_yeast(display_long)|uniprotkb:RRP1(gene name)|psi-mi:RRP1(display_short)|uniprotkb:D4478(orf name)|uniprotkb:YDR087C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000002494|interpro:IPR010301(Nucleolar, Nop52)|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YDR087C(gene)|ensemblfungi:YDR087C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|refseq:NP_010372.3|dip:DIP-4622N|mint:P35178 - crc64:131001C956787BE5 crc64:7E906A028ADAE8A6 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:e7JQmwcQSik+AnzD1MH8KUpNGb4559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P25582 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N - crc64:131001C956787BE5 crc64:D7A080299B0C7E24 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P40007 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-22439|uniprotkb:D3DLP8|ensemblfungi:YER002W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:nop16_yeast(display_long)|uniprotkb:NOP16(gene name)|psi-mi:NOP16(display_short)|uniprotkb:YER002W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_010917.3|sgd:S000000804|dip:DIP-6555N|mint:P40007|ensemblfungi:YER002W(gene)|ensemblfungi:YER002W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR019002|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5 - crc64:131001C956787BE5 crc64:B1D27F0B817AADED figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:PD98kIVFrhy3yk5bcTAz5DxIDaA559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P36049 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226 - crc64:131001C956787BE5 crc64:4A11F6CDF779DB5A figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:Q08962 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-12067|uniprotkb:D6W3F9|ensemblfungi:YPL211W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:nip7_yeast(display_long)|uniprotkb:YPL211W(locus name)|uniprotkb:NIP7(gene name)|psi-mi:NIP7(display_short)|uniprotkb:Nuclear import protein 7(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 ensemblfungi:YPL211W(gene)|ensemblfungi:YPL211W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042255"(ribosome assembly)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR002478(PUA)|interpro:IPR005155(Ribosome biogenesis factor NIP7-like)|interpro:IPR015947(PUA-like)|interpro:IPR016686(Ribosome biogenesis factor, NIP7)|interpro:IPR036974|interpro:IPR040598|rcsb pdb:6ELZ|go:"GO:0003723"(RNA binding)|rcsb pdb:6EM5|refseq:NP_015113.1|sgd:S000006132|mint:Q08962|dip:DIP-1456N - crc64:131001C956787BE5 crc64:82EAE8E4B2FCC31A figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:VVPB1u3oRbh7O35Bzm6G7yHRLsE559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:Q02892 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N - crc64:131001C956787BE5 crc64:640324779AE4D716 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P40693 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693 - crc64:131001C956787BE5 crc64:64714DDFAFB90B5D figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:Q12522 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-9046|ensemblfungi:YPR016C|uniprotkb:D6W426 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:if6_yeast(display_long)|uniprotkb:TIF6(gene name)|psi-mi:TIF6(display_short)|uniprotkb:CDC95(gene name synonym)|uniprotkb:YPR016C(locus name)|uniprotkb:LPZ15C(orf name) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6N8M|rcsb pdb:6N8N|rcsb pdb:6N8O|rcsb pdb:6QIK|rcsb pdb:6QT0|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6R86|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6EM1|rcsb pdb:6RZZ|rcsb pdb:6S05|rcsb pdb:6YLG|ensemblfungi:YPR016C(gene)|ensemblfungi:YPR016C_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042256"(mature ribosome assembly)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043022"(ribosome binding)|go:"GO:0043023"(ribosomal large subunit binding)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR002769(Translation initiation factor IF6)|rcsb pdb:1G62|rcsb pdb:2X7N|rcsb pdb:3J2I|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5H4P|rcsb pdb:5JCS|rcsb pdb:5T62|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:7BTB|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:6ELZ|refseq:NP_015341.1|sgd:S000006220|mint:Q12522|dip:DIP-5395N - crc64:131001C956787BE5 crc64:1BCE041C61DFD2A8 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:FI24/9LOZsCJEfbb7pjCQ+C8i/U559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:Q04660 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226 - crc64:131001C956787BE5 crc64:6542DFE4670341CA figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P10962 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N - crc64:131001C956787BE5 crc64:309ED6897EA24F73 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P38805 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5 - crc64:131001C956787BE5 crc64:EC6EDB2FCE252D4A figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:Q07915 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-35766|uniprotkb:D6VY11|ensemblfungi:YLR009W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rlp24_yeast(display_long)|uniprotkb:RLP24(gene name)|psi-mi:RLP24(display_short)|uniprotkb:Ribosomal protein L24-like(gene name synonym)|uniprotkb:YLR009W(locus name) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_013109.1|sgd:S000003999|dip:DIP-4748N|ensemblfungi:YLR009W(gene)|ensemblfungi:YLR009W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0006412"(translation)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0051117"(ATPase binding)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000988(Ribosomal protein L24e)|interpro:IPR011017(TRASH)|interpro:IPR038630|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB - crc64:131001C956787BE5 crc64:D7F1CD7EB92C6576 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:HFS5BIyItWW+xOlyt514hEWr58k559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:Q03532 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis) - crc64:131001C956787BE5 crc64:EE15D51A7F6BE1A2 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P32892 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417 - crc64:131001C956787BE5 crc64:60747607A6E5E4A8 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:Q08235 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-3775|uniprotkb:D6W1Z1|ensemblfungi:YOL077C psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:brx1_yeast(display_long)|uniprotkb:YOL077C(locus name)|uniprotkb:BRX1(gene name)|psi-mi:BRX1(display_short) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_014565.2|sgd:S000005437|dip:DIP-6317N|mint:Q08235|ensemblfungi:YOL077C(gene)|ensemblfungi:YOL077C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR026532|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5 - crc64:131001C956787BE5 crc64:31466853EF0E7301 figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:mPR6HWKwM6RNCRE/vezsYlCmEGY559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P38706 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-15313 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rl27_yeast(display_long)|uniprotkb:RPL27A(gene name)|psi-mi:RPL27A(display_short)|uniprotkb:RPL27(gene name synonym)|uniprotkb:YHR010W(locus name)|uniprotkb:RPL27B(gene name)|psi-mi:RPL27B(display_short)|uniprotkb:YDR471W(locus name)|uniprotkb:D8035.14(orf name) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000001052(RPL27A)|sgd:S000002879(RPL27B)|go:"GO:0005842"|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|interpro:IPR005824(KOW)|interpro:IPR001141(Ribosomal protein L27e) - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:mh2ubCb6nyRIH4r45ItPlIs8Z1o4932 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P02406 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-15318|uniprotkb:D6VU43|ensemblfungi:YGL103W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rl28_yeast(display_long)|uniprotkb:YGL103W(locus name)|uniprotkb:RPL28(gene name)|psi-mi:RPL28(display_short)|uniprotkb:CYH2(gene name synonym)|uniprotkb:L29(gene name synonym)|uniprotkb:YL24(gene name synonym)|uniprotkb:RP44(gene name synonym)|uniprotkb:L27a(gene name synonym)|uniprotkb:RP62(gene name synonym)|uniprotkb:Large ribosomal subunit protein uL15(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_011412.1|sgd:S000003071|interpro:IPR001196(Ribosomal protein L15)|interpro:IPR021131|rcsb pdb:1K5Y|reactome:R-SCE-156827|rcsb pdb:7AZY|rcsb pdb:7B7D|rcsb pdb:7NRC|rcsb pdb:7NRD|reactome:R-SCE-72689|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|interpro:IPR030878|rcsb pdb:4V6I|rcsb pdb:4V7F|rcsb pdb:4V7R|rcsb pdb:4V88|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:4V91|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6N8J|rcsb pdb:6N8M|rcsb pdb:6N8N|rcsb pdb:6N8O|rcsb pdb:6Q8Y|rcsb pdb:4V8T|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5APN|rcsb pdb:5APO|rcsb pdb:5FL8|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:6M62|rcsb pdb:6XIQ|rcsb pdb:6XIR|rcsb pdb:6YLG|rcsb pdb:6YLH|reactome:R-SCE-1799339|rcsb pdb:6HHQ|rcsb pdb:5GAK|rcsb pdb:6HD7|ensemblfungi:YGL103W(gene)|ensemblfungi:YGL103W_mRNA(transcript)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0022625"(cytosolic large ribosomal subunit)|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:3J78|rcsb pdb:4U3M|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4V4B|rcsb pdb:3JCT|rcsb pdb:5DC3|rcsb pdb:5I4L|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:5JUT|rcsb pdb:5JUU|rcsb pdb:5DAT|rcsb pdb:5T62|rcsb pdb:5T6R|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5LYB|rcsb pdb:5TGA|rcsb pdb:5ON6|rcsb pdb:5JCS|rcsb pdb:5DGE|rcsb pdb:5H4P|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5TGM|interpro:IPR036227|rcsb pdb:5MEI|rcsb pdb:5TBW|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:6ELZ|rcsb pdb:6FT6|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6QIK|rcsb pdb:6QT0|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6RZZ|rcsb pdb:6S05|rcsb pdb:6I7O|rcsb pdb:6R86|rcsb pdb:6S47|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6SNT|rcsb pdb:6SV4|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6OIG|rcsb pdb:6WOO|rcsb pdb:7BT6|rcsb pdb:7BTB - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:wyZPWCEROOzQBdmTH3fUWkIWi+w559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P04456 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-15308|uniprotkb:D6W1U1|ensemblfungi:YOL127W psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rl25_yeast(display_long)|uniprotkb:YOL127W(locus name)|uniprotkb:RPL25(gene name)|psi-mi:RPL25(display_short)|uniprotkb:YL25(gene name synonym)|uniprotkb:RP16L(gene name synonym)|uniprotkb:YP42'(gene name synonym)|uniprotkb:Large ribosomal subunit protein uL23(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 refseq:NP_014514.1|sgd:S000005487|reactome:R-SCE-156827|reactome:R-SCE-72689|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|reactome:R-SCE-1799339|ensemblfungi:YOL127W(gene)|ensemblfungi:YOL127W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0019843"(rRNA binding)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR001014(Ribosomal protein L23, conserved site)|interpro:IPR005633(Ribosomal protein L23/L25, N-terminal)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR012678(Ribosomal protein L23/L15e, core)|interpro:IPR013025(Ribosomal protein L25/L23)|rcsb pdb:1K5Y|rcsb pdb:2WW9|rcsb pdb:2WWA|rcsb pdb:2WWB|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:5JUT|rcsb pdb:5JUU|rcsb pdb:5LYB|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5MEI|rcsb pdb:5NDG|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:5ON6|rcsb pdb:5T62|rcsb pdb:5T6R|rcsb pdb:5TBW|rcsb pdb:5TGA|rcsb pdb:5TGM|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6HD7|rcsb pdb:6HHQ|rcsb pdb:6I7O|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6N8M|rcsb pdb:6N8N|rcsb pdb:6N8O|rcsb pdb:6OIG|rcsb pdb:6Q8Y|rcsb pdb:6QIK|rcsb pdb:6QT0|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6R86|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6RZZ|rcsb pdb:6S05|rcsb pdb:6S47|rcsb pdb:6SNT|rcsb pdb:6SV4|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6WOO|rcsb pdb:6XIQ|rcsb pdb:6XIR|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:3J78|rcsb pdb:3JCT|rcsb pdb:4U3M|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V4B|rcsb pdb:4V6I|rcsb pdb:4V7F|rcsb pdb:4V7R|rcsb pdb:4V88|rcsb pdb:4V8T|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:4V91|rcsb pdb:5APN|rcsb pdb:5APO|rcsb pdb:5DAT|rcsb pdb:5DC3|rcsb pdb:5DGE|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5FL8|rcsb pdb:5GAK|rcsb pdb:5H4P|rcsb pdb:5I4L|rcsb pdb:5JCS|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:7AZY|rcsb pdb:7B7D|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:7NRC|rcsb pdb:7NRD|dip:DIP-7137N - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:EjLr1wGyykXvvHofNGPonJi/OtM559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P04451 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-15303|uniprotkb:D3DM23 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rl23_yeast(display_long)|uniprotkb:RPL23A(gene name)|psi-mi:RPL23A(display_short)|uniprotkb:RPL17A(gene name synonym)|uniprotkb:YBL087C(locus name)|uniprotkb:YBL0713(orf name)|uniprotkb:RPL23B(gene name)|psi-mi:RPL23B(display_short)|uniprotkb:RPL17B(gene name synonym)|uniprotkb:YER117W(locus name)|uniprotkb:RPL17AA(gene name synonym)|uniprotkb:RPL17AB(gene name synonym)|uniprotkb:L17a(gene name synonym)|uniprotkb:YL32(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000000183(RPL23A)|sgd:S000000919(RPL23B)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR000218(Ribosomal protein L14b/L23e)|rcsb pdb:1K5Y|rcsb pdb:1S1I|interpro:IPR019972|rcsb pdb:3IZS|rcsb pdb:3O58|rcsb pdb:3O5H|rcsb pdb:2X7N|refseq:NP_009466.1|refseq:NP_011042.1|interpro:IPR023571 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:4GPRS278IdXySICCq92sVLj61Ig559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P0C2I0 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-15298|uniprotkb:A1YV95|uniprotkb:A1YV96|uniprotkb:P0C2I1|uniprotkb:P47913|uniprotkb:D6W068 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rl20_yeast(display_long)|uniprotkb:RPL20A(gene name)|psi-mi:RPL20A(display_short)|uniprotkb:RPL18A2(gene name synonym)|uniprotkb:YMR242C(locus name)|uniprotkb:YM9408.04C(orf name)|uniprotkb:RPL20B(gene name)|psi-mi:RPL20B(display_short)|uniprotkb:RPL18A1(gene name synonym)|uniprotkb:RPL18B(gene name synonym)|uniprotkb:YOR312C(locus name)|uniprotkb:O6116(orf name)|uniprotkb:RPL18A(gene name synonym)|uniprotkb:L18a(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000004855(RPL20A)|sgd:S000005839(RPL20B)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|interpro:IPR021138|refseq:NP_013969.3|refseq:NP_014957.2|interpro:IPR023573 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:Kiqa+r8Kr95jMRvZmLoiVR3M7uk559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P05735 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-15293|uniprotkb:D6VPX3 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rl19_yeast(display_long)|uniprotkb:RPL19A(gene name)|psi-mi:RPL19A(display_short)|uniprotkb:YBR084C-A(locus name)|uniprotkb:YBR084BC(orf name)|uniprotkb:RPL19B(gene name)|psi-mi:RPL19B(display_short)|uniprotkb:YBL027W(locus name)|uniprotkb:RPL23A(gene name synonym)|uniprotkb:YL14A(gene name synonym)|uniprotkb:RPL23B(gene name synonym)|uniprotkb:YBL0424(orf name)|uniprotkb:YL14B(gene name synonym)|uniprotkb:L23(gene name synonym)|uniprotkb:YL14(gene name synonym)|uniprotkb:RP15L(gene name synonym)|uniprotkb:RP33(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 sgd:S000000123(RPL19B)|sgd:S000002156(RPL19A)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|interpro:IPR023638|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR015972(Ribosomal protein L19/L19e, domain 1)|interpro:IPR015974(Ribosomal protein L19/L19e, domain 3)|interpro:IPR000196(Ribosomal protein L19/L19e)|rcsb pdb:1K5Y|rcsb pdb:1S1I|rcsb pdb:3IZS|rcsb pdb:3O58|rcsb pdb:3O5H|rcsb pdb:2WW9|rcsb pdb:2WWA|refseq:NP_009526.1|refseq:NP_009641.1 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:zoe7XVdyD2d1AS/N/+Di7Xn1PAs559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting) uniprotkb:P53261 uniprotkb:P07279 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-15288|uniprotkb:D6W0P3 psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:rl18_yeast(display_long)|uniprotkb:RPL18A(gene name)|psi-mi:RPL18A(display_short)|uniprotkb:RP28A(gene name synonym)|uniprotkb:YOL120C(locus name)|uniprotkb:RPL18B(gene name)|psi-mi:RPL18B(display_short)|uniprotkb:RP28B(gene name synonym)|uniprotkb:YNL301C(locus name)|uniprotkb:N0425(orf name)|uniprotkb:RP28(gene name synonym) psi-mi:"MI:0676"(tandem affinity purification) Harnpicharnchai et al. (2001) pubmed:11583614|imex:IM-19691 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1173644|imex:IM-19691-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226 go:"GO:0022625"(cytosolic large ribosomal subunit)|sgd:S000005480(RPL18A)|sgd:S000005245(RPL18B)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0006412"(translation)|interpro:IPR000039(Ribosomal protein L18e)|cygd:YNL301c|cygd:YOL120c|rcsb pdb:1K5Y|rcsb pdb:1S1I|rcsb pdb:3IZS|rcsb pdb:3O58|rcsb pdb:3O5H|interpro:IPR021131|interpro:IPR021132|refseq:NP_014098.1|refseq:NP_014521.1 - crc64:131001C956787BE5 - figure legend:1 and supplement table S1|comment:RPL4 was also seen but couldn't assign a Swiss-Prot AC because in Swiss-Prot there are two different entries, one for RPL4A and one for RPL4B. The same is true for RPL7, RPL8, RPL11, RPL13, RPL15, RPL16, RPL17, RPL22, RPL24, RPL26 and RPS1, RPS9, RPS17, RPS25 and RPS26.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2006/12/01 2014/10/16 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:86FYqzXCj53J/AFzhS7OtvmGwWs559292 intact-crc:82EFEAFAAF947628|rigid:wYh2oLo4CRLw7yoTbcGcSDeDF9I false calmodulin binding peptide plus protein a tag:c-c - - - psi-mi:"MI:0082"(peptide massfingerprinting) psi-mi:"MI:0082"(peptide massfingerprinting)