#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:Q02948	uniprotkb:P22543	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-514896	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	crc64:4BA74B614CABE1C0	crc64:806E3404EF260287	figure legend:Fig. 1D	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	intact-crc:020855B8F7534A3A|rigid:c1TK7vDZ7DrM9jIHX/HtrsLuP8M	false	his tag:?-?|myc tag:?-?	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q02948	uniprotkb:P22219	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	intact:EBI-20347|uniprotkb:D6VQ98|ensemblfungi:YBR097W	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:vps15_yeast(display_long)|uniprotkb:VPS15(gene name)|psi-mi:VPS15(display_short)|uniprotkb:GRD8(gene name synonym)|uniprotkb:VPL19(gene name synonym)|uniprotkb:YBR0825(orf name)|uniprotkb:YBR097W(locus name)|uniprotkb:VAC4(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 15(gene name synonym)|uniprotkb:Golgi-retention defective mutant protein 8(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-514896	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	refseq:NP_009655.2|sgd:S000000301|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0048017"(inositol lipid-mediated signaling)|go:"GO:0071561"(nucleus-vacuole junction)|ensemblfungi:YBR097W(gene)|go:"GO:0106310"(protein serine kinase activity)|ensemblfungi:YBR097W_mRNA(transcript)|go:"GO:0106311"|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001680(WD40 repeat)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR036322|rcsb pdb:3GRE|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0030242"(autophagy of peroxisome)|dip:DIP-814N|mint:P22219	-	crc64:4BA74B614CABE1C0	crc64:247EBA5531E41FFB	figure legend:Fig. 1D	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rogid:bDKA6IlevNTmtSQqleAbkY7/eAI559292	intact-crc:020855B8F7534A3A|rigid:c1TK7vDZ7DrM9jIHX/HtrsLuP8M	false	his tag:?-?|myc tag:?-?	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q02948	uniprotkb:Q05919	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	intact:EBI-29972|uniprotkb:Q6B1J7|uniprotkb:D6VYZ7|ensemblfungi:YLR360W	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:vps38_yeast(display_long)|uniprotkb:VPS38(gene name)|psi-mi:VPS38(display_short)|uniprotkb:VPL17(gene name synonym)|uniprotkb:YLR360W(locus name)|uniprotkb:L8039.11(orf name)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-514896	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	sgd:S000004352|refseq:NP_013464.3|dip:DIP-8809N|mint:Q05919|ensemblfungi:YLR360W(gene)|ensemblfungi:YLR360W_mRNA(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0000323"(lytic vacuole)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0035493"(SNARE complex assembly)|go:"GO:0045324"(late endosome to vacuole transport)|interpro:IPR040939|rcsb pdb:5DFZ|reactome:R-SCE-1632852	-	crc64:4BA74B614CABE1C0	crc64:70141E084D185015	figure legend:Fig. 1D	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rogid:J13HZljzRxl6p0wukZg3YXJn6+w559292	intact-crc:020855B8F7534A3A|rigid:c1TK7vDZ7DrM9jIHX/HtrsLuP8M	false	his tag:?-?|myc tag:?-?	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q02948	uniprotkb:P38270	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-514896	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	-	crc64:4BA74B614CABE1C0	crc64:202039BC7EC8BB16	figure legend:Fig. 1D	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	intact-crc:020855B8F7534A3A|rigid:c1TK7vDZ7DrM9jIHX/HtrsLuP8M	false	his tag:?-?|myc tag:?-?	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q02948	uniprotkb:P22543	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2903956	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	crc64:4BA74B614CABE1C0	crc64:806E3404EF260287	figure legend:Fig. 1A-C	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	intact-crc:B9AC8DF7F5AD510C|rigid:RwyY46LF1NO5fgJ6zRCm9R8UsCU	false	myc tag:?-?|his tag:?-?|35s radiolabel:?-?	35s radiolabel:?-?	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:Q02948	uniprotkb:Q05919	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	intact:EBI-29972|uniprotkb:Q6B1J7|uniprotkb:D6VYZ7|ensemblfungi:YLR360W	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:vps38_yeast(display_long)|uniprotkb:VPS38(gene name)|psi-mi:VPS38(display_short)|uniprotkb:VPL17(gene name synonym)|uniprotkb:YLR360W(locus name)|uniprotkb:L8039.11(orf name)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2903956	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	sgd:S000004352|refseq:NP_013464.3|dip:DIP-8809N|mint:Q05919|ensemblfungi:YLR360W(gene)|ensemblfungi:YLR360W_mRNA(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0000323"(lytic vacuole)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0035493"(SNARE complex assembly)|go:"GO:0045324"(late endosome to vacuole transport)|interpro:IPR040939|rcsb pdb:5DFZ|reactome:R-SCE-1632852	-	crc64:4BA74B614CABE1C0	crc64:70141E084D185015	figure legend:Fig. 1A-C	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rogid:J13HZljzRxl6p0wukZg3YXJn6+w559292	intact-crc:B9AC8DF7F5AD510C|rigid:RwyY46LF1NO5fgJ6zRCm9R8UsCU	false	myc tag:?-?|his tag:?-?|35s radiolabel:?-?	35s radiolabel:?-?	-	-	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)	psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry)
uniprotkb:P38270	uniprotkb:P22219	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-20347|uniprotkb:D6VQ98|ensemblfungi:YBR097W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:vps15_yeast(display_long)|uniprotkb:VPS15(gene name)|psi-mi:VPS15(display_short)|uniprotkb:GRD8(gene name synonym)|uniprotkb:VPL19(gene name synonym)|uniprotkb:YBR0825(orf name)|uniprotkb:YBR097W(locus name)|uniprotkb:VAC4(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 15(gene name synonym)|uniprotkb:Golgi-retention defective mutant protein 8(gene name synonym)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2903977	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_009655.2|sgd:S000000301|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0048017"(inositol lipid-mediated signaling)|go:"GO:0071561"(nucleus-vacuole junction)|ensemblfungi:YBR097W(gene)|go:"GO:0106310"(protein serine kinase activity)|ensemblfungi:YBR097W_mRNA(transcript)|go:"GO:0106311"|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001680(WD40 repeat)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR036322|rcsb pdb:3GRE|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0030242"(autophagy of peroxisome)|dip:DIP-814N|mint:P22219	-	crc64:202039BC7EC8BB16	crc64:247EBA5531E41FFB	figure legend:Fig. 1D	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:bDKA6IlevNTmtSQqleAbkY7/eAI559292	intact-crc:834FC14329176AEC|rigid:t1pnd/yR+Q+NoF6cSxM0cklErLo	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:P38270	uniprotkb:P22543	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2903977	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	crc64:202039BC7EC8BB16	crc64:806E3404EF260287	figure legend:Fig. 1D	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	intact-crc:834FC14329176AEC|rigid:t1pnd/yR+Q+NoF6cSxM0cklErLo	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:P38270	uniprotkb:Q02948	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2903977	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	-	crc64:202039BC7EC8BB16	crc64:4BA74B614CABE1C0	figure legend:Fig. 1D	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	intact-crc:834FC14329176AEC|rigid:t1pnd/yR+Q+NoF6cSxM0cklErLo	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q05919	uniprotkb:P22219	intact:EBI-29972|uniprotkb:Q6B1J7|uniprotkb:D6VYZ7|ensemblfungi:YLR360W	intact:EBI-20347|uniprotkb:D6VQ98|ensemblfungi:YBR097W	psi-mi:vps38_yeast(display_long)|uniprotkb:VPS38(gene name)|psi-mi:VPS38(display_short)|uniprotkb:VPL17(gene name synonym)|uniprotkb:YLR360W(locus name)|uniprotkb:L8039.11(orf name)	psi-mi:vps15_yeast(display_long)|uniprotkb:VPS15(gene name)|psi-mi:VPS15(display_short)|uniprotkb:GRD8(gene name synonym)|uniprotkb:VPL19(gene name synonym)|uniprotkb:YBR0825(orf name)|uniprotkb:YBR097W(locus name)|uniprotkb:VAC4(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 15(gene name synonym)|uniprotkb:Golgi-retention defective mutant protein 8(gene name synonym)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2903983	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004352|refseq:NP_013464.3|dip:DIP-8809N|mint:Q05919|ensemblfungi:YLR360W(gene)|ensemblfungi:YLR360W_mRNA(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0000323"(lytic vacuole)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0035493"(SNARE complex assembly)|go:"GO:0045324"(late endosome to vacuole transport)|interpro:IPR040939|rcsb pdb:5DFZ|reactome:R-SCE-1632852	refseq:NP_009655.2|sgd:S000000301|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0048017"(inositol lipid-mediated signaling)|go:"GO:0071561"(nucleus-vacuole junction)|ensemblfungi:YBR097W(gene)|go:"GO:0106310"(protein serine kinase activity)|ensemblfungi:YBR097W_mRNA(transcript)|go:"GO:0106311"|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001680(WD40 repeat)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR036322|rcsb pdb:3GRE|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0030242"(autophagy of peroxisome)|dip:DIP-814N|mint:P22219	-	crc64:70141E084D185015	crc64:247EBA5531E41FFB	figure legend:Fig. 4A	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:J13HZljzRxl6p0wukZg3YXJn6+w559292	rogid:bDKA6IlevNTmtSQqleAbkY7/eAI559292	intact-crc:CD3990A4DE88D747|rigid:zzkLj6zGz+Yy+9nKYuODyrOyrU0	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q05919	uniprotkb:P22543	intact:EBI-29972|uniprotkb:Q6B1J7|uniprotkb:D6VYZ7|ensemblfungi:YLR360W	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:vps38_yeast(display_long)|uniprotkb:VPS38(gene name)|psi-mi:VPS38(display_short)|uniprotkb:VPL17(gene name synonym)|uniprotkb:YLR360W(locus name)|uniprotkb:L8039.11(orf name)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2903983	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004352|refseq:NP_013464.3|dip:DIP-8809N|mint:Q05919|ensemblfungi:YLR360W(gene)|ensemblfungi:YLR360W_mRNA(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0000323"(lytic vacuole)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0035493"(SNARE complex assembly)|go:"GO:0045324"(late endosome to vacuole transport)|interpro:IPR040939|rcsb pdb:5DFZ|reactome:R-SCE-1632852	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	crc64:70141E084D185015	crc64:806E3404EF260287	figure legend:Fig. 4A	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:J13HZljzRxl6p0wukZg3YXJn6+w559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	intact-crc:CD3990A4DE88D747|rigid:zzkLj6zGz+Yy+9nKYuODyrOyrU0	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q05919	uniprotkb:Q02948	intact:EBI-29972|uniprotkb:Q6B1J7|uniprotkb:D6VYZ7|ensemblfungi:YLR360W	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	psi-mi:vps38_yeast(display_long)|uniprotkb:VPS38(gene name)|psi-mi:VPS38(display_short)|uniprotkb:VPL17(gene name synonym)|uniprotkb:YLR360W(locus name)|uniprotkb:L8039.11(orf name)	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2903983	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004352|refseq:NP_013464.3|dip:DIP-8809N|mint:Q05919|ensemblfungi:YLR360W(gene)|ensemblfungi:YLR360W_mRNA(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0000323"(lytic vacuole)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0035493"(SNARE complex assembly)|go:"GO:0045324"(late endosome to vacuole transport)|interpro:IPR040939|rcsb pdb:5DFZ|reactome:R-SCE-1632852	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	-	crc64:70141E084D185015	crc64:4BA74B614CABE1C0	figure legend:Fig. 4A	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:J13HZljzRxl6p0wukZg3YXJn6+w559292	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	intact-crc:CD3990A4DE88D747|rigid:zzkLj6zGz+Yy+9nKYuODyrOyrU0	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q02948	uniprotkb:P22543	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2904004	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	crc64:4BA74B614CABE1C0	crc64:806E3404EF260287	figure legend:Fig. 4A|comment:Interaction observed in atg14-/- cells.	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	intact-crc:8D15C46F046ED851|rigid:zzkLj6zGz+Yy+9nKYuODyrOyrU0	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q02948	uniprotkb:Q05919	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	intact:EBI-29972|uniprotkb:Q6B1J7|uniprotkb:D6VYZ7|ensemblfungi:YLR360W	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:vps38_yeast(display_long)|uniprotkb:VPS38(gene name)|psi-mi:VPS38(display_short)|uniprotkb:VPL17(gene name synonym)|uniprotkb:YLR360W(locus name)|uniprotkb:L8039.11(orf name)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2904004	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	sgd:S000004352|refseq:NP_013464.3|dip:DIP-8809N|mint:Q05919|ensemblfungi:YLR360W(gene)|ensemblfungi:YLR360W_mRNA(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0000323"(lytic vacuole)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0035493"(SNARE complex assembly)|go:"GO:0045324"(late endosome to vacuole transport)|interpro:IPR040939|rcsb pdb:5DFZ|reactome:R-SCE-1632852	-	crc64:4BA74B614CABE1C0	crc64:70141E084D185015	figure legend:Fig. 4A|comment:Interaction observed in atg14-/- cells.	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rogid:J13HZljzRxl6p0wukZg3YXJn6+w559292	intact-crc:8D15C46F046ED851|rigid:zzkLj6zGz+Yy+9nKYuODyrOyrU0	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q02948	uniprotkb:P22219	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	intact:EBI-20347|uniprotkb:D6VQ98|ensemblfungi:YBR097W	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:vps15_yeast(display_long)|uniprotkb:VPS15(gene name)|psi-mi:VPS15(display_short)|uniprotkb:GRD8(gene name synonym)|uniprotkb:VPL19(gene name synonym)|uniprotkb:YBR0825(orf name)|uniprotkb:YBR097W(locus name)|uniprotkb:VAC4(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 15(gene name synonym)|uniprotkb:Golgi-retention defective mutant protein 8(gene name synonym)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2904004	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	refseq:NP_009655.2|sgd:S000000301|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0045053"(protein retention in Golgi apparatus)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0048017"(inositol lipid-mediated signaling)|go:"GO:0071561"(nucleus-vacuole junction)|ensemblfungi:YBR097W(gene)|go:"GO:0106310"(protein serine kinase activity)|ensemblfungi:YBR097W_mRNA(transcript)|go:"GO:0106311"|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR001680(WD40 repeat)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR036322|rcsb pdb:3GRE|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0030242"(autophagy of peroxisome)|dip:DIP-814N|mint:P22219	-	crc64:4BA74B614CABE1C0	crc64:247EBA5531E41FFB	figure legend:Fig. 4A|comment:Interaction observed in atg14-/- cells.	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rogid:bDKA6IlevNTmtSQqleAbkY7/eAI559292	intact-crc:8D15C46F046ED851|rigid:zzkLj6zGz+Yy+9nKYuODyrOyrU0	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q02948	uniprotkb:P38270	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2904011	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	-	crc64:4BA74B614CABE1C0	crc64:202039BC7EC8BB16	figure legend:Fig. 4A|comment:Interaction observed in vps38-/- cells.	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	intact-crc:16E799D962EB388C|rigid:+ftwhvaJep0DgiWscDb7NeDFikA	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q02948	uniprotkb:Q05919	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	intact:EBI-29972|uniprotkb:Q6B1J7|uniprotkb:D6VYZ7|ensemblfungi:YLR360W	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:vps38_yeast(display_long)|uniprotkb:VPS38(gene name)|psi-mi:VPS38(display_short)|uniprotkb:VPL17(gene name synonym)|uniprotkb:YLR360W(locus name)|uniprotkb:L8039.11(orf name)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2904016	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	sgd:S000004352|refseq:NP_013464.3|dip:DIP-8809N|mint:Q05919|ensemblfungi:YLR360W(gene)|ensemblfungi:YLR360W_mRNA(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0000323"(lytic vacuole)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0035493"(SNARE complex assembly)|go:"GO:0045324"(late endosome to vacuole transport)|interpro:IPR040939|rcsb pdb:5DFZ|reactome:R-SCE-1632852	-	crc64:4BA74B614CABE1C0	crc64:70141E084D185015	figure legend:Fig. 4A|comment:Interaction observed in vps34-/- cells.	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rogid:J13HZljzRxl6p0wukZg3YXJn6+w559292	intact-crc:2894919B5DDF2C7B|rigid:kpaEnJyZI8ZAx7RmXrH8iXJdsoc	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q02948	uniprotkb:P38270	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2904016	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	-	crc64:4BA74B614CABE1C0	crc64:202039BC7EC8BB16	figure legend:Fig. 4A|comment:Interaction observed in vps34-/- cells.	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	intact-crc:2894919B5DDF2C7B|rigid:kpaEnJyZI8ZAx7RmXrH8iXJdsoc	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:Q05919	uniprotkb:Q02948	intact:EBI-29972|uniprotkb:Q6B1J7|uniprotkb:D6VYZ7|ensemblfungi:YLR360W	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	psi-mi:vps38_yeast(display_long)|uniprotkb:VPS38(gene name)|psi-mi:VPS38(display_short)|uniprotkb:VPL17(gene name synonym)|uniprotkb:YLR360W(locus name)|uniprotkb:L8039.11(orf name)	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:"MI:0006"(anti bait coimmunoprecipitation)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2904023	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000004352|refseq:NP_013464.3|dip:DIP-8809N|mint:Q05919|ensemblfungi:YLR360W(gene)|ensemblfungi:YLR360W_mRNA(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0000323"(lytic vacuole)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005768"(endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0035493"(SNARE complex assembly)|go:"GO:0045324"(late endosome to vacuole transport)|interpro:IPR040939|rcsb pdb:5DFZ|reactome:R-SCE-1632852	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	-	crc64:70141E084D185015	crc64:4BA74B614CABE1C0	figure legend:Fig. 4A|comment:Interaction observed in vps15-/- cells.	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:J13HZljzRxl6p0wukZg3YXJn6+w559292	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	intact-crc:454215A981898677|rigid:QExqx/5VrerPFd9I6DITyXS/o7k	false	-	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:P38270	uniprotkb:Q02948	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-2670|uniprotkb:D6W3P7|ensemblfungi:YPL120W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:becn1_yeast(display_long)|uniprotkb:VPS30(gene name)|psi-mi:VPS30(display_short)|uniprotkb:APG6(gene name synonym)|uniprotkb:VPT30(gene name synonym)|uniprotkb:YPL120W(locus name)|uniprotkb:LPH7(orf name)|uniprotkb:ATG6(gene name synonym)|uniprotkb:Autophagy-related protein 6(gene name synonym)	psi-mi:"MI:0096"(pull down)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2903995	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_015205.1|sgd:S000006041|reactome:R-SCE-1632852|dip:DIP-2961N|ensemblfungi:YPL120W(gene)|ensemblfungi:YPL120W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006623"(protein targeting to vacuole)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006914"(autophagy)|go:"GO:0006995"(cellular response to nitrogen starvation)|go:"GO:0010008"(endosome membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0045324"(late endosome to vacuole transport)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR007243(Autophagy protein 6)|interpro:IPR038274|interpro:IPR040455|interpro:IPR041691|rcsb pdb:3VP7|rcsb pdb:5DFZ	-	crc64:202039BC7EC8BB16	crc64:4BA74B614CABE1C0	figure legend:Fig. 4C	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:FrJZDpz1EeDouNi0FVJr5NVU3NY559292	intact-crc:554BD7885EDB18CA|rigid:e8bOyBZCcpmn/GPsch2klNDgILY	false	myc tag:?-?|his tag:?-?	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:P38270	uniprotkb:P22543	intact:EBI-2699|uniprotkb:D6VQC5|ensemblfungi:YBR128C	intact:EBI-20405|uniprotkb:D6VYN8|ensemblfungi:YLR240W	psi-mi:atg14_yeast(display_long)|uniprotkb:ATG14(gene name)|psi-mi:ATG14(display_short)|uniprotkb:APG14(gene name synonym)|uniprotkb:YBR128C(locus name)|uniprotkb:YBR1003(orf name)|uniprotkb:CVT12(gene name synonym)|uniprotkb:Cytoplasm to vacuole targeting protein 12(gene name synonym)	psi-mi:vps34_yeast(display_long)|uniprotkb:VPS34(gene name)|psi-mi:VPS34(display_short)|uniprotkb:END12(gene name synonym)|uniprotkb:PEP15(gene name synonym)|uniprotkb:Vacuolar protein sorting-associated protein 34(gene name synonym)|uniprotkb:Vacuolar protein-targeting protein 29(gene name synonym)|uniprotkb:Carboxypeptidase Y-deficient protein 15(gene name synonym)|uniprotkb:VPL7(gene name synonym)|uniprotkb:VPT29(gene name synonym)|uniprotkb:L9672.10(orf name)|uniprotkb:YLR240W(locus name)	psi-mi:"MI:0096"(pull down)	Kihara et al. (2001)	pubmed:11157979	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0486"(UniProt)	intact:EBI-2903995	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_009686.1|sgd:S000000332|dip:DIP-2741N|mint:P38270|ensemblfungi:YBR128C(gene)|ensemblfungi:YBR128C_mRNA(transcript)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0016236"(macroautophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0120095"(vacuole-isolation membrane contact site)|interpro:IPR018791|interpro:IPR023261	refseq:NP_013341.1|sgd:S000004230|ensemblfungi:YLR240W(gene)|ensemblfungi:YLR240W_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005777"(peroxisome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010008"(endosome membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0016236"(macroautophagy)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016303"(1-phosphatidylinositol-3-kinase activity)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0034271"(phosphatidylinositol 3-kinase complex, class III, type I)|go:"GO:0034272"(phosphatidylinositol 3-kinase complex, class III, type II)|go:"GO:0036092"(phosphatidylinositol-3-phosphate biosynthetic process)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0048015"(phosphatidylinositol-mediated signaling)|go:"GO:0052742"(phosphatidylinositol kinase activity)|go:"GO:0071561"(nucleus-vacuole junction)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR001263(Phosphoinositide 3-kinase accessory region PIK)|interpro:IPR002420(Phosphoinositide 3-kinase, C2)|interpro:IPR008290(Phosphatidylinositol 3-kinase, Vps34 type)|interpro:IPR011009(Protein kinase-like)|interpro:IPR015433(Phosphatidylinositol Kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR018936|interpro:IPR035892|interpro:IPR036940|rcsb pdb:5DFZ|rcsb pdb:5KC2|reactome:R-SCE-1632852|reactome:R-SCE-1660514|reactome:R-SCE-1660516|reactome:R-SCE-1660517|reactome:R-SCE-5668599|dip:DIP-97N|mint:P22543	-	crc64:202039BC7EC8BB16	crc64:806E3404EF260287	figure legend:Fig. 4C	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2005/03/04	2014/10/16	rogid:2EgOCBKZFO6Gvj0RB/MM8jV0k1s559292	rogid:a8TnZYg+pKpfjIhB9uInf8Y0uOw559292	intact-crc:554BD7885EDB18CA|rigid:e8bOyBZCcpmn/GPsch2klNDgILY	false	myc tag:?-?|his tag:?-?	-	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)