Gene Ontology
Ontology Comparison Report
==========================

Files used:
- file 1 (old): go-2011-12-03.obo; date: 02:12:2011 16:46; CVS revision: 1.2418
- file 2 (new): go-2011-12-10.obo; date: 09:12:2011 12:27; CVS revision: 1.2428

NEW TERMS
=========

ID	name	namespace
GO:0036043	microspike	cellular_component
GO:0044377	RNA polymerase II core promoter proximal region sequence-specific DNA binding, bending	molecular_function
GO:0044378	non-sequence-specific DNA binding, bending	molecular_function
GO:0044379	protein localization to actin cortical patch	biological_process
GO:0044381	glucose import in response to insulin stimulus	biological_process
GO:0052839	inositol diphosphate tetrakisphosphate kinase activity	molecular_function
GO:0052840	inositol diphosphate tetrakisphosphate diphosphatase activity	molecular_function
GO:0052841	inositol bisdiphosphate tetrakisphosphate diphosphatase activity	molecular_function
GO:0052842	inositol diphosphate pentakisphosphate diphosphatase activity	molecular_function
GO:0052843	inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity	molecular_function
GO:0052844	inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity	molecular_function
GO:0052845	inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity	molecular_function
GO:0052846	inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity	molecular_function
GO:0052847	inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity	molecular_function
GO:0052848	inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity	molecular_function
GO:0052849	NADPH-dependent curcurmin reductase activity	molecular_function
GO:0052850	NADPH-dependent dihydrocurcurmin reductase activity	molecular_function
GO:0052851	ferric-chelate reductase (NADPH) activity	molecular_function
GO:0052852	very-long-chain-(S)-2-hydroxy-acid oxidase activity	molecular_function
GO:0052853	long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	molecular_function
GO:0052854	medium-chain-(S)-2-hydroxy-acid oxidase activity	molecular_function
GO:0052855	ADP-dependent NAD(P)H-hydrate dehydratase activity	molecular_function
GO:0052856	NADHX epimerase activity	molecular_function
GO:0052857	NADPHX epimerase activity	molecular_function
GO:0052858	peptidyl-lysine N-acetyltransferase activity	molecular_function
GO:0052859	glucan endo-1,4-beta-glucosidase activity	molecular_function
GO:0052860	2'-deoxymugineic-acid 3-dioxygenase activity	molecular_function
GO:0052861	glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group	molecular_function
GO:0052862	glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group	molecular_function
GO:0052863	1-deoxy-D-xylulose 5-phosphate metabolic process	biological_process
GO:0052864	1-deoxy-D-xylulose 5-phosphate catabolic process	biological_process
GO:0052865	1-deoxy-D-xylulose 5-phosphate biosynthetic process	biological_process
GO:0072694	cell cycle arrest in response to caffeine	biological_process
GO:0097198	histone H3-K36 trimethylation	biological_process


OBSOLETIONS
===========
GO:0003706, ligand-regulated transcription factor activity (molecular_function)
GO:0034339, regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor (biological_process)
GO:0072500, negative regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor (biological_process)


TERM MERGES
===========

None


TERM CHANGES
============

KEY:  'A' : added, 'D' : deleted, 'C' : changed

Term ID	name	def	comment	subset	synonym	xref	is_a	relationship	is_obsolete	replaced_by	consider	
GO:0000038	C											
GO:0000908							1 D, 1 A					
GO:0001503			A									
GO:0001692							1 D, 1 A					
GO:0001695							1 A					
GO:0003706		C	A				1 D		A		2 A	
GO:0003708		C										
GO:0003832		C										
GO:0004402							1 D, 1 A					
GO:0005040								1 D				
GO:0008486					3 D, 3 A	1 A						
GO:0008810					5 D, 5 A							
GO:0008823		C				1 A						
GO:0008849		C				1 A						
GO:0016706		C			1 A							
GO:0017099	C	C										
GO:0018602		C										
GO:0019797					1 D, 1 A							
GO:0030035		C	A									
GO:0030416		C										
GO:0030745						1 D		1 D				
GO:0031217					3 D, 3 A							
GO:0031543		C										
GO:0031964		C										
GO:0033758				1 A								
GO:0033761		C				3 A						
GO:0033946					1 D, 1 A							
GO:0034339		C	C				1 D		A		4 A	
GO:0043734		C		1 A								
GO:0044374							1 A					
GO:0045330				1 A								
GO:0045544				1 A								
GO:0046847		C					1 D, 1 A					
GO:0047079	C				2 D, 2 A							
GO:0047080	C				6 D, 6 A							
GO:0047453					1 D, 1 A							
GO:0050353		C										
GO:0050590						2 A						
GO:0052704								2 A				
GO:0052705								1 D				
GO:0052706								1 D				
GO:0052707								1 D, 3 A				
GO:0052711								1 D				
GO:0052773								1 D				
GO:0052774								1 D				
GO:0052776								3 A				
GO:0052790								1 D				
GO:0052803	C											
GO:0052805	C											
GO:0072500		C	A				1 D		A		4 A	
GO:0080182		C										
GO:2000190										1 D	4 A	



FILE STATS
==========

Term counts for the old and new files

Ontology	Old file	New file	Change
molecular function	9168	9193	+25
	(9168 defined)	(9193 defined)	
cellular component	2926	2927	+1
	(2926 defined)	(2927 defined)	
biological process	21659	21664	+5
	(21659 defined)	(21664 defined)	

Obsolete	1603	1606	+3
	(4.5% of total)	 (4.5% of total)	(+0.2%)

Totals	33753	33784	+34 (+0.1%)
	33753 (100.0%) defined	33784 (100.0%) defined	
	35356 inc. obs	35390 inc. obs