Gene Ontology New Additions, Deletions, Substitutions: A Report

New terms

ID	name	namespace
GO:0036012	cyanelle inner membrane	cellular_component
GO:0036013	cyanelle outer membrane	cellular_component
GO:0036014	cyanelle intermembrane space	cellular_component
GO:0036015	response to interleukin-3	biological_process
GO:0036016	cellular response to interleukin-3	biological_process
GO:0036017	response to erythropoietin	biological_process
GO:0036018	cellular response to erythropoietin	biological_process
GO:0036019	endolysosome	cellular_component
GO:0036020	endolysosome membrane	cellular_component
GO:0036021	endolysosome lumen	cellular_component
GO:0036022	limb joint morphogenesis	biological_process
GO:0036023	embryonic skeletal limb joint morphogenesis	biological_process
GO:0097176	epoxide metabolic process	biological_process
GO:0097177	mitochondrial ribosome binding	molecular_function
GO:2001115	methanopterin metabolic process	biological_process
GO:2001116	methanopterin biosynthetic process	biological_process
GO:2001117	tetrahydromethanopterin metabolic process	biological_process
GO:2001118	tetrahydromethanopterin biosynthetic process	biological_process
GO:2001119	methanofuran metabolic process	biological_process
GO:2001120	methanofuran biosynthetic process	biological_process
GO:2001121	coenzyme gamma-F420-2 biosynthetic process	biological_process
GO:2001122	maltoheptaose metabolic process	biological_process
GO:2001123	maltoheptaose catabolic process	biological_process
GO:2001124	regulation of translational frameshifting	biological_process
GO:2001125	negative regulation of translational frameshifting	biological_process
GO:2001126	positive regulation of translational frameshifting	biological_process
GO:2001127	methane biosynthetic process from formic acid	biological_process
GO:2001128	methane biosynthetic process from methylamine	biological_process
GO:2001129	methane biosynthetic process from dimethylamine	biological_process
GO:2001130	methane biosynthetic process from trimethylamine	biological_process
GO:2001131	methane biosynthetic process from dimethyl sulfide	biological_process
GO:2001132	methane biosynthetic process from 3-(methylthio)propionic acid	biological_process
GO:2001133	methane biosynthetic process from methanethiol	biological_process
GO:2001134	methane biosynthetic process from carbon monoxide	biological_process
GO:2001135	regulation of endocytic recycling	biological_process
GO:2001136	negative regulation of endocytic recycling	biological_process
GO:2001137	positive regulation of endocytic recycling	biological_process
GO:2001138	regulation of phospholipid transport	biological_process
GO:2001139	negative regulation of phospholipid transport	biological_process
GO:2001140	positive regulation of phospholipid transport	biological_process

Obsoletions

None

Term merges

None

Term changes

KEY: 'A' : added, 'D' : deleted, 'C' : changed (for properties with only one value)

Changes in term-related data
Term ID	name	namespace	def	synonym	is_a	relationship
Term ID	name	namespace	def	synonym	is_a	relationship
GO:0000981 sequence-specific DNA binding RNA polymerase II transcription factor activity						1 A
GO:0000982 RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity						1 D
GO:0000988 protein binding transcription factor activity						1 A
GO:0001007 RNA polymerase III transcription factor binding transcription factor activity						1 A
GO:0001034 sequence-specific DNA binding RNA polymerase III transcription factor activity						1 A
GO:0001076 RNA polymerase II transcription factor binding transcription factor activity						1 A
GO:0001082 RNA polymerase I transcription factor binding transcription factor activity						1 A
GO:0001167 sequence-specific DNA binding RNA polymerase I transcription factor activity						1 A
GO:0003700 sequence-specific DNA binding transcription factor activity						1 D
GO:0004900 erythropoietin receptor activity						1 A
GO:0004912 interleukin-3 receptor activity						1 A
GO:0006434 seryl-tRNA aminoacylation						1 A
GO:0006452 translational frameshifting					1 D, 1 A
GO:0006915 apoptosis
GO:0009842 cyanelle			C
GO:0032488 Cdc42 protein signal transduction
GO:0035111 leg joint morphogenesis					1 A
GO:0038025 reelin receptor activity
GO:0039503 suppression by virus of host innate immune response	C			1 A
GO:0043021 ribonucleoprotein complex binding	C			2 A
GO:0045087 innate immune response				1 A
GO:0052033 pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	C			1 A
GO:0052034 negative regulation by symbiont of microbe-associated molecular pattern-induced host innate immune response	C			1 A
GO:0052157 modulation by symbiont of microbe-associated molecular pattern-induced host innate immune response	C			1 A
GO:0052166 positive regulation by symbiont of host innate immune response	C			1 A
GO:0052167 modulation by symbiont of host innate immune response	C			1 A
GO:0052169 pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response	C			1 A
GO:0052170 negative regulation by symbiont of host innate immune response	C			1 A
GO:0052257 pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction	C			1 A
GO:0052258 negative regulation by organism of pathogen-associated molecular pattern-induced innate immune response of other organism involved in symbiotic interaction	C			1 A
GO:0052296 modulation by organism of microbe-associated molecular pattern-induced innate immune response in other organism involved in symbiotic interaction	C			1 A
GO:0052305 positive regulation by organism of innate immune response in other organism involved in symbiotic interaction	C			1 A
GO:0052306 modulation by organism of innate immune response in other organism involved in symbiotic interaction	C			1 D, 1 A
GO:0052308 pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction	C			1 A
GO:0052309 negative regulation by organism of innate immune response in other organism involved in symbiotic interaction	C
GO:0052382 induction by organism of innate immune response in other organism involved in symbiotic interaction	C			2 D, 1 A
GO:0052390 induction by symbiont of host innate immune response	C			1 A
GO:0052763 ulvan lyase activity			C
GO:0052799 coenzyme F420-dependent bicyclic nitroimidazole catabolic process		C
GO:0052800 bicyclic nitroimidazole catabolic process		C
GO:0052801 bicyclic nitroimidazole metabolic process		C
GO:0052802 nitroimidazole metabolic process		C
GO:0052803 imidazole metabolic process		C
GO:0052804 nitroimidazole catabolic process		C
GO:0052805 imidazole catabolic process		C
GO:0060272 embryonic skeletal joint morphogenesis			C
GO:0061091 regulation of phospholipid translocation					1 D, 1 A
GO:0061092 positive regulation of phospholipid translocation					1 D, 1 A
GO:0061093 negative regulation of phospholipid translocation					1 D, 1 A
GO:0071889 14-3-3 protein binding
GO:0097056 selenocysteinyl-tRNA(Sec) biosynthetic process			C		1 D, 1 A

File Stats

Term counts for the old and new files
Ontology	Old file	New file	Change
molecular function	9147 9147 (100.0%) defined	9141 9141 (100.0%) defined	-6
cellular component	2900 2900 (100.0%) defined	2906 2906 (100.0%) defined	+6
biological process	21464 21464 (100.0%) defined	21504 21504 (100.0%) defined	+40
Obsolete	1587 (4.5% of total)	1587 (4.5% of total)	0 (0.0%)
Totals	33511 33511 (100.0%) defined 35098 inc. obsoletes	33551 33551 (100.0%) defined 35138 inc. obsoletes	+40 (+0.1%)

Gene Ontology: Ontology Comparison Report

New terms

Obsoletions

Term merges

Term changes

File Stats