GO Monthly Release Notes for December 2007 ======================== Generated on Mon Jan 7 14:41:15 2008 Files used: gene_ontology.obo OLD: version , NEW: version , goslim_generic Key: |----1----||----2-----||-3--||4||----5----||-----------6-----------| GO:0009941 GO:0009536 TAIR D SF:575119 chloroplast envelope (obs) 1. GO ID number 2. GO-slim term(s) that new term was added under or "obs" if the term is obsolete. Terms with more than one GO-slim parent have further parents listed underneath the first parent. 3. Database that added term 4. indicates the existence of a definition for the term 5. the sourceforge request ID the term was added in response to 6. term name Columns are tab-delimited and can be imported into Excel for ease of reading. SourceForge items closed this month: SF id Resolution SF item title GO ids added, if any 1456229 Rejected AMPA receptor mediated synaptic transmission 1660160 Accepted new term: microsporocyte development 1693852 Accepted serotonin secretion 1751898 Fixed ion homeostasis reorganization 1761745 Accepted Golgi to secretory vesicle transport 1773424 Accepted NTR: ...guanyltransferase activity etc. 1773507 Accepted NTR: response to sulfur dioxide 1773515 Accepted NTR: gibberellin-mediated signaling 1789457 Fixed phospholipases and sphingomyelinases 1790378 Accepted clarification: flower vs. floral whorl devt 1799275 Accepted add synonym: tapetal layer dev't 1823598 Accepted apelin receptor 1824802 Accepted fluid secretion and water homeostasis 1825022 Accepted Component term for bacterial cell pole 1826264 Accepted cell proliferation definitions 1826281 Accepted GO:0047769 term name change 1826886 Works For Me difference between ferredoxin-NADP+ reductase activity 1835267 Accepted NTRs: ear emergence and ear unfolding 1835499 Accepted two terms for rhamnose biosynthesis 1836102 Accepted NTR: chlororespiration 1836131 Accepted NTR: stele development 1836135 Accepted NTR: epidermal cell division 1836964 Fixed mitochondrial genome maintenance/ def query 1838624 Fixed tRNA-specific adenosine deaminase activity 1839445 Fixed inc parent: triose-phosphate transmembrane transporter activ 1839930 Accepted ntr: HMF reductase activity and furaldehyde metabolism 1840593 Accepted possible de-obsoletion of GO:0004171 1841907 Fixed inc par protein amino acid phos 1841927 Works For Me mp: ergosterol biosynthesis 1841932 Fixed inc p: phospholipid translocation 1842610 Fixed possible TPV ATP biosynthesis 1842613 Works For Me poss miss parent ubiquninone biosynthesis 1842679 Fixed phosphatidylcholine transmembrane transporter activity 1842689 Fixed parent base-excision repair, AP site formation 1842695 Works For Me recombinase activity 1843255 Accepted rg:NTR: regulation of NADPH oxidase activity 1843544 Accepted NTR: H4 histone acetyltransferase activity 1843547 Accepted NTR: H3 histone acetyltransferase activity 1843557 Accepted NTR: maintenance of shoot apical meristem identity 1843570 Rejected NTR: septum development 1843683 Accepted NTR: regulation of epidermal cell division 1843763 Accepted NTR: pollen tube reception 1843766 Accepted NTR: snoRNP assembly terms 1843775 Accepted NTR: stress granule 1843805 Accepted Exomer complex 1844310 Accepted NTR: intercellular transport 1844408 Accepted NTR: manganese:hydrogen antiporter activity 1844416 Accepted NTR: thermospermine synthase activity 1844426 Accepted NTR: UDP-galactose:N-glycan beta-1,3-galactosyltransferase . 1844444 Accepted NTR: Lewis a epitope biosynthetic process 1844906 Fixed tpv 3'-phosphoadenosine 5'-phosphosulfate metabolic process 1845497 Works For Me small subunit processome mp 1845958 Accepted NTR: P-body biogenesis/assembly 1846579 Accepted NTR: proteasome related process terms 1847801 Fixed MP:signal transduction during conjugation with cellular fusi 1847832 Fixed MP: fatty acid beta-oxidation 1847859 Accepted NTR:8-oxo-7,8-dihydroguanine DNA N-glycosylase activity 1847905 Accepted lipid-transporting ATPase activity 1847984 Accepted NTR:Preautophagosomal structure membrane 1848185 Accepted fixing 'regulation of cell cycle' terms 1848522 Accepted quick/add synonym 1848720 Accepted NTR: acidocalcisome lumen 1849010 Accepted Response to methanol 1849397 Accepted re-entry into mitotic cell cycle 1849479 Accepted Response to lipid 1849504 Accepted Response to silicon dioxide 1849525 Accepted NTR: transmitting tissue development 1849534 Accepted NTR: RNA secondary structure unwinding 1849536 Accepted improve definitions of adaxial/abaxial - related terms 1849543 Accepted NTR: plastoglobuli 1850143 Accepted NTR: poly(G) binding 1850369 Accepted ntr: regulation of protein phophatase type 2A 1850999 Accepted lipopolysaccharide synonyms 1852576 Accepted estrogen response element binding 1852581 Accepted missing parentage: copper chaperone activity 1852623 Accepted sodium:hydrogen exchanger 1852646 Accepted ntr: RNA strand-exchange activity 1852820 None New term: Regulation of arginine metabolism 1852821 None New term: Inositol hexakisphosphate binding Statistics: