297 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}} 104 Alignments of female alveolar macrophage RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female alveolar macrophage RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female alveolar macrophage", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 251 Spliced-read support for female alveolar macrophage Female alveolar macrophage intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female alveolar macrophage", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 11 Annotation generated from female alveolar macrophage RNA-seq data Female alveolar macrophage RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female alveolar macrophage", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 105 Alignments of female amygdala RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female amygdala RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female amygdala", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 285 Spliced-read support for female amygdala Female amygdala intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female amygdala", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 40 Annotation generated from female amygdala RNA-seq data Female amygdala RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female amygdala", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 106 Alignments of female brainstem RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female brainstem RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female brainstem", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 283 Spliced-read support for female brainstem Female brainstem intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female brainstem", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 19 Annotation generated from female brainstem RNA-seq data Female brainstem RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female brainstem", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 107 Alignments of female caecum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female caecum RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female caecum", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 271 Spliced-read support for female caecum Female caecum intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female caecum", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 46 Annotation generated from female caecum RNA-seq data Female caecum RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female caecum", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 108 Alignments of female cerebellum 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female cerebellum 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female cerebellum 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 215 Spliced-read support for female cerebellum 70dpf Female cerebellum 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female cerebellum 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 62 Annotation generated from female cerebellum 70dpf RNA-seq data Female cerebellum 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female cerebellum 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 109 Alignments of female cerebellum neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female cerebellum neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female cerebellum neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 227 Spliced-read support for female cerebellum neonate Female cerebellum neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female cerebellum neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 69 Annotation generated from female cerebellum neonate RNA-seq data Female cerebellum neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female cerebellum neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 110 Alignments of female cerebellum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female cerebellum RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female cerebellum", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 259 Spliced-read support for female cerebellum Female cerebellum intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female cerebellum", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 53 Annotation generated from female cerebellum RNA-seq data Female cerebellum RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female cerebellum", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 111 Alignments of female colon RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female colon RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female colon", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 244 Spliced-read support for female colon Female colon intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female colon", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 9 Annotation generated from female colon RNA-seq data Female colon RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female colon", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 112 Alignments of female corpus callosum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female corpus callosum RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female corpus callosum", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 276 Spliced-read support for female corpus callosum Female corpus callosum intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female corpus callosum", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 20 Annotation generated from female corpus callosum RNA-seq data Female corpus callosum RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female corpus callosum", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 113 Alignments of female cortex of kidney RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female cortex of kidney RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female cortex of kidney", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 284 Spliced-read support for female cortex of kidney Female cortex of kidney intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female cortex of kidney", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 12 Annotation generated from female cortex of kidney RNA-seq data Female cortex of kidney RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female cortex of kidney", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 114 Alignments of female dorsal plus ventral thalamus RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female dorsal plus ventral thalamus RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female dorsal plus ventral thalamus", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 278 Spliced-read support for female dorsal plus ventral thalamus Female dorsal plus ventral thalamus intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female dorsal plus ventral thalamus", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 52 Annotation generated from female dorsal plus ventral thalamus RNA-seq data Female dorsal plus ventral thalamus RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female dorsal plus ventral thalamus", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 115 Alignments of female duodenum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female duodenum RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female duodenum", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 266 Spliced-read support for female duodenum Female duodenum intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female duodenum", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 18 Annotation generated from female duodenum RNA-seq data Female duodenum RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female duodenum", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 116 Alignments of female frontal cortex RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female frontal cortex RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female frontal cortex", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 269 Spliced-read support for female frontal cortex Female frontal cortex intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female frontal cortex", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 36 Annotation generated from female frontal cortex RNA-seq data Female frontal cortex RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female frontal cortex", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 117 Alignments of female gluteus medius neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female gluteus medius neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female gluteus medius neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 236 Spliced-read support for female gluteus medius neonate Female gluteus medius neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female gluteus medius neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 77 Annotation generated from female gluteus medius neonate RNA-seq data Female gluteus medius neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female gluteus medius neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 118 Alignments of female heart left ventricle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female heart left ventricle RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female heart left ventricle", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 274 Spliced-read support for female heart left ventricle Female heart left ventricle intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female heart left ventricle", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 16 Annotation generated from female heart left ventricle RNA-seq data Female heart left ventricle RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female heart left ventricle", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 119 Alignments of female hindbrain 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female hindbrain 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female hindbrain 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 231 Spliced-read support for female hindbrain 30dpf Female hindbrain 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female hindbrain 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 87 Annotation generated from female hindbrain 30dpf RNA-seq data Female hindbrain 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female hindbrain 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 120 Alignments of female hindlimb muscle 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female hindlimb muscle 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female hindlimb muscle 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 206 Spliced-read support for female hindlimb muscle 30dpf Female hindlimb muscle 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female hindlimb muscle 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 86 Annotation generated from female hindlimb muscle 30dpf RNA-seq data Female hindlimb muscle 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female hindlimb muscle 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 121 Alignments of female hindlimb muscle 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female hindlimb muscle 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female hindlimb muscle 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 240 Spliced-read support for female hindlimb muscle 70dpf Female hindlimb muscle 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female hindlimb muscle 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 27 Annotation generated from female hindlimb muscle 70dpf RNA-seq data Female hindlimb muscle 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female hindlimb muscle 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 122 Alignments of female hippocampal formation RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female hippocampal formation RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female hippocampal formation", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 248 Spliced-read support for female hippocampal formation Female hippocampal formation intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female hippocampal formation", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 10 Annotation generated from female hippocampal formation RNA-seq data Female hippocampal formation RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female hippocampal formation", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 123 Alignments of female ileum neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female ileum neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female ileum neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 219 Spliced-read support for female ileum neonate Female ileum neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female ileum neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 57 Annotation generated from female ileum neonate RNA-seq data Female ileum neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female ileum neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 124 Alignments of female ileum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female ileum RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female ileum", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 256 Spliced-read support for female ileum Female ileum intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female ileum", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 29 Annotation generated from female ileum RNA-seq data Female ileum RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female ileum", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 125 Alignments of female kidney 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female kidney 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female kidney 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 235 Spliced-read support for female kidney 70dpf Female kidney 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female kidney 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 32 Annotation generated from female kidney 70dpf RNA-seq data Female kidney 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female kidney 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 126 Alignments of female kidney neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female kidney neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female kidney neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 239 Spliced-read support for female kidney neonate Female kidney neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female kidney neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 84 Annotation generated from female kidney neonate RNA-seq data Female kidney neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female kidney neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 127 Alignments of female liver 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female liver 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female liver 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 209 Spliced-read support for female liver 30dpf Female liver 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female liver 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 72 Annotation generated from female liver 30dpf RNA-seq data Female liver 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female liver 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 128 Alignments of female liver 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female liver 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female liver 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 228 Spliced-read support for female liver 70dpf Female liver 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female liver 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 71 Annotation generated from female liver 70dpf RNA-seq data Female liver 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female liver 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 129 Alignments of female liver neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female liver neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female liver neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 217 Spliced-read support for female liver neonate Female liver neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female liver neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 65 Annotation generated from female liver neonate RNA-seq data Female liver neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female liver neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 130 Alignments of female lung 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female lung 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female lung 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 213 Spliced-read support for female lung 30dpf Female lung 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female lung 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 95 Annotation generated from female lung 30dpf RNA-seq data Female lung 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female lung 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 131 Alignments of female lung 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female lung 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female lung 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 212 Spliced-read support for female lung 70dpf Female lung 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female lung 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 88 Annotation generated from female lung 70dpf RNA-seq data Female lung 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female lung 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 132 Alignments of female lung neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female lung neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female lung neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 207 Spliced-read support for female lung neonate Female lung neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female lung neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 81 Annotation generated from female lung neonate RNA-seq data Female lung neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female lung neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 133 Alignments of female medulla oblongata RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female medulla oblongata RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female medulla oblongata", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 286 Spliced-read support for female medulla oblongata Female medulla oblongata intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female medulla oblongata", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 24 Annotation generated from female medulla oblongata RNA-seq data Female medulla oblongata RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female medulla oblongata", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 134 Alignments of female mesenteric lymph node RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female mesenteric lymph node RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female mesenteric lymph node", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 263 Spliced-read support for female mesenteric lymph node Female mesenteric lymph node intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female mesenteric lymph node", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 45 Annotation generated from female mesenteric lymph node RNA-seq data Female mesenteric lymph node RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female mesenteric lymph node", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 135 Alignments of female mesonephros 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female mesonephros 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female mesonephros 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 220 Spliced-read support for female mesonephros 30dpf Female mesonephros 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female mesonephros 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 80 Annotation generated from female mesonephros 30dpf RNA-seq data Female mesonephros 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female mesonephros 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 136 Alignments of female occipital cortex RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female occipital cortex RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female occipital cortex", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 280 Spliced-read support for female occipital cortex Female occipital cortex intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female occipital cortex", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 42 Annotation generated from female occipital cortex RNA-seq data Female occipital cortex RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female occipital cortex", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 137 Alignments of female omentum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female omentum RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female omentum", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 265 Spliced-read support for female omentum Female omentum intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female omentum", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 25 Annotation generated from female omentum RNA-seq data Female omentum RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female omentum", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 138 Alignments of female pituitary gland RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female pituitary gland RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female pituitary gland", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 261 Spliced-read support for female pituitary gland Female pituitary gland intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female pituitary gland", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 56 Annotation generated from female pituitary gland RNA-seq data Female pituitary gland RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female pituitary gland", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 139 Alignments of female pons RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female pons RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female pons", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 289 Spliced-read support for female pons Female pons intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female pons", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 23 Annotation generated from female pons RNA-seq data Female pons RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female pons", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 140 Alignments of female skeletal muscle tissue RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female skeletal muscle tissue RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female skeletal muscle tissue", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 253 Spliced-read support for female skeletal muscle tissue Female skeletal muscle tissue intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female skeletal muscle tissue", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 38 Annotation generated from female skeletal muscle tissue RNA-seq data Female skeletal muscle tissue RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female skeletal muscle tissue", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 141 Alignments of female skin of back 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female skin of back 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female skin of back 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 238 Spliced-read support for female skin of back 70dpf Female skin of back 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female skin of back 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 89 Annotation generated from female skin of back 70dpf RNA-seq data Female skin of back 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female skin of back 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 142 Alignments of female skin of back neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female skin of back neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female skin of back neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 202 Spliced-read support for female skin of back neonate Female skin of back neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female skin of back neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 85 Annotation generated from female skin of back neonate RNA-seq data Female skin of back neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female skin of back neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 143 Alignments of female skin of body 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female skin of body 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female skin of body 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 221 Spliced-read support for female skin of body 30dpf Female skin of body 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female skin of body 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 98 Annotation generated from female skin of body 30dpf RNA-seq data Female skin of body 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female skin of body 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 144 Alignments of female small intestine 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female small intestine 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female small intestine 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 234 Spliced-read support for female small intestine 30dpf Female small intestine 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female small intestine 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 100 Annotation generated from female small intestine 30dpf RNA-seq data Female small intestine 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female small intestine 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 145 Alignments of female small intestine 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female small intestine 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female small intestine 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 232 Spliced-read support for female small intestine 70dpf Female small intestine 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Female small intestine 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 79 Annotation generated from female small intestine 70dpf RNA-seq data Female small intestine 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Female small intestine 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 146 Alignments of female spleen RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female spleen RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female spleen", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 243 Spliced-read support for female spleen Female spleen intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female spleen", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 26 Annotation generated from female spleen RNA-seq data Female spleen RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female spleen", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 147 Alignments of female stomach RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female stomach RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female stomach", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 291 Spliced-read support for female stomach Female stomach intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female stomach", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 30 Annotation generated from female stomach RNA-seq data Female stomach RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female stomach", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 148 Alignments of female uterus RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Female uterus RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female uterus", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 273 Spliced-read support for female uterus Female uterus intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female uterus", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 21 Annotation generated from female uterus RNA-seq data Female uterus RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Female uterus", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 149 Alignments of male alveolar macrophage RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male alveolar macrophage RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male alveolar macrophage", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 246 Spliced-read support for male alveolar macrophage Male alveolar macrophage intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male alveolar macrophage", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 33 Annotation generated from male alveolar macrophage RNA-seq data Male alveolar macrophage RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male alveolar macrophage", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 150 Alignments of male amygdala RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male amygdala RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male amygdala", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 281 Spliced-read support for male amygdala Male amygdala intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male amygdala", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 55 Annotation generated from male amygdala RNA-seq data Male amygdala RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male amygdala", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 151 Alignments of male brainstem RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male brainstem RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male brainstem", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 252 Spliced-read support for male brainstem Male brainstem intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male brainstem", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 50 Annotation generated from male brainstem RNA-seq data Male brainstem RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male brainstem", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 152 Alignments of male brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male brain RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Cancer Research UK", "row": "Male brain", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 296 Spliced-read support for male brain Male brain intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Cancer Research UK", "row": "Male brain", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 83 Annotation generated from male brain RNA-seq data Male brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Cancer Research UK", "row": "Male brain", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 153 Alignments of male caecum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male caecum RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male caecum", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 249 Spliced-read support for male caecum Male caecum intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male caecum", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 51 Annotation generated from male caecum RNA-seq data Male caecum RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male caecum", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 154 Alignments of male cerebellum 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male cerebellum 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male cerebellum 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 233 Spliced-read support for male cerebellum 70dpf Male cerebellum 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male cerebellum 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 97 Annotation generated from male cerebellum 70dpf RNA-seq data Male cerebellum 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male cerebellum 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 155 Alignments of male cerebellum neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male cerebellum neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male cerebellum neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 204 Spliced-read support for male cerebellum neonate Male cerebellum neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male cerebellum neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 99 Annotation generated from male cerebellum neonate RNA-seq data Male cerebellum neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male cerebellum neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 156 Alignments of male cerebellum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male cerebellum RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male cerebellum", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 268 Spliced-read support for male cerebellum Male cerebellum intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male cerebellum", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 37 Annotation generated from male cerebellum RNA-seq data Male cerebellum RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male cerebellum", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 157 Alignments of male colon RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male colon RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male colon", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 288 Spliced-read support for male colon Male colon intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male colon", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 48 Annotation generated from male colon RNA-seq data Male colon RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male colon", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 158 Alignments of male corpus callosum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male corpus callosum RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male corpus callosum", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 270 Spliced-read support for male corpus callosum Male corpus callosum intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male corpus callosum", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 49 Annotation generated from male corpus callosum RNA-seq data Male corpus callosum RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male corpus callosum", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 159 Alignments of male cortex of kidney RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male cortex of kidney RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male cortex of kidney", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 247 Spliced-read support for male cortex of kidney Male cortex of kidney intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male cortex of kidney", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 28 Annotation generated from male cortex of kidney RNA-seq data Male cortex of kidney RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male cortex of kidney", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 160 Alignments of male dorsal plus ventral thalamus RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male dorsal plus ventral thalamus RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male dorsal plus ventral thalamus", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 275 Spliced-read support for male dorsal plus ventral thalamus Male dorsal plus ventral thalamus intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male dorsal plus ventral thalamus", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 8 Annotation generated from male dorsal plus ventral thalamus RNA-seq data Male dorsal plus ventral thalamus RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male dorsal plus ventral thalamus", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 161 Alignments of male duodenum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male duodenum RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male duodenum", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 292 Spliced-read support for male duodenum Male duodenum intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male duodenum", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 63 Annotation generated from male duodenum RNA-seq data Male duodenum RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male duodenum", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 162 Alignments of male epididymis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male epididymis RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male epididymis", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 290 Spliced-read support for male epididymis Male epididymis intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male epididymis", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 44 Annotation generated from male epididymis RNA-seq data Male epididymis RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male epididymis", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 163 Alignments of male frontal cortex RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male frontal cortex RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male frontal cortex", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 250 Spliced-read support for male frontal cortex Male frontal cortex intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male frontal cortex", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 7 Annotation generated from male frontal cortex RNA-seq data Male frontal cortex RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male frontal cortex", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 164 Alignments of male gluteus medius neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male gluteus medius neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male gluteus medius neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 241 Spliced-read support for male gluteus medius neonate Male gluteus medius neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male gluteus medius neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 92 Annotation generated from male gluteus medius neonate RNA-seq data Male gluteus medius neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male gluteus medius neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 165 Alignments of male heart left ventricle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male heart left ventricle RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male heart left ventricle", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 260 Spliced-read support for male heart left ventricle Male heart left ventricle intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male heart left ventricle", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 14 Annotation generated from male heart left ventricle RNA-seq data Male heart left ventricle RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male heart left ventricle", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 166 Alignments of male hindbrain 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male hindbrain 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male hindbrain 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 216 Spliced-read support for male hindbrain 30dpf Male hindbrain 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male hindbrain 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 93 Annotation generated from male hindbrain 30dpf RNA-seq data Male hindbrain 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male hindbrain 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 167 Alignments of male hindlimb muscle 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male hindlimb muscle 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male hindlimb muscle 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 201 Spliced-read support for male hindlimb muscle 30dpf Male hindlimb muscle 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male hindlimb muscle 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 91 Annotation generated from male hindlimb muscle 30dpf RNA-seq data Male hindlimb muscle 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male hindlimb muscle 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 168 Alignments of male hindlimb muscle 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male hindlimb muscle 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male hindlimb muscle 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 242 Spliced-read support for male hindlimb muscle 70dpf Male hindlimb muscle 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male hindlimb muscle 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 90 Annotation generated from male hindlimb muscle 70dpf RNA-seq data Male hindlimb muscle 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male hindlimb muscle 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 169 Alignments of male hippocampal formation RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male hippocampal formation RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male hippocampal formation", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 255 Spliced-read support for male hippocampal formation Male hippocampal formation intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male hippocampal formation", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 43 Annotation generated from male hippocampal formation RNA-seq data Male hippocampal formation RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male hippocampal formation", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 170 Alignments of male ileum neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male ileum neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male ileum neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 211 Spliced-read support for male ileum neonate Male ileum neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male ileum neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 70 Annotation generated from male ileum neonate RNA-seq data Male ileum neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male ileum neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 171 Alignments of male ileum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male ileum RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male ileum", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 287 Spliced-read support for male ileum Male ileum intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male ileum", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 31 Annotation generated from male ileum RNA-seq data Male ileum RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male ileum", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 172 Alignments of male kidney 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male kidney 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male kidney 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 203 Spliced-read support for male kidney 70dpf Male kidney 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male kidney 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 64 Annotation generated from male kidney 70dpf RNA-seq data Male kidney 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male kidney 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 173 Alignments of male kidney neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male kidney neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male kidney neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 205 Spliced-read support for male kidney neonate Male kidney neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male kidney neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 94 Annotation generated from male kidney neonate RNA-seq data Male kidney neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male kidney neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 174 Alignments of male liver 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male liver 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male liver 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 230 Spliced-read support for male liver 30dpf Male liver 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male liver 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 59 Annotation generated from male liver 30dpf RNA-seq data Male liver 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male liver 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 175 Alignments of male liver 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male liver 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male liver 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 225 Spliced-read support for male liver 70dpf Male liver 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male liver 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 58 Annotation generated from male liver 70dpf RNA-seq data Male liver 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male liver 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 176 Alignments of male liver neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male liver neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male liver neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 237 Spliced-read support for male liver neonate Male liver neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male liver neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 74 Annotation generated from male liver neonate RNA-seq data Male liver neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male liver neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 177 Alignments of male liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male liver RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Cancer Research UK", "row": "Male liver", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 295 Spliced-read support for male liver Male liver intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Cancer Research UK", "row": "Male liver", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 60 Annotation generated from male liver RNA-seq data Male liver RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Cancer Research UK", "row": "Male liver", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 178 Alignments of male lung 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male lung 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male lung 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 226 Spliced-read support for male lung 30dpf Male lung 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male lung 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 66 Annotation generated from male lung 30dpf RNA-seq data Male lung 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male lung 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 179 Alignments of male lung 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male lung 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male lung 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 210 Spliced-read support for male lung 70dpf Male lung 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male lung 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 73 Annotation generated from male lung 70dpf RNA-seq data Male lung 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male lung 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 180 Alignments of male lung neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male lung neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male lung neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 214 Spliced-read support for male lung neonate Male lung neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male lung neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 76 Annotation generated from male lung neonate RNA-seq data Male lung neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male lung neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 181 Alignments of male medulla oblongata RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male medulla oblongata RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male medulla oblongata", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 272 Spliced-read support for male medulla oblongata Male medulla oblongata intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male medulla oblongata", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 47 Annotation generated from male medulla oblongata RNA-seq data Male medulla oblongata RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male medulla oblongata", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 182 Alignments of male mesenteric lymph node RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male mesenteric lymph node RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male mesenteric lymph node", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 262 Spliced-read support for male mesenteric lymph node Male mesenteric lymph node intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male mesenteric lymph node", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 39 Annotation generated from male mesenteric lymph node RNA-seq data Male mesenteric lymph node RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male mesenteric lymph node", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 183 Alignments of male mesonephros 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male mesonephros 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male mesonephros 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 208 Spliced-read support for male mesonephros 30dpf Male mesonephros 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male mesonephros 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 82 Annotation generated from male mesonephros 30dpf RNA-seq data Male mesonephros 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male mesonephros 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 184 Alignments of male muscle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male muscle RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Cancer Research UK", "row": "Male muscle", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 294 Spliced-read support for male muscle Male muscle intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Cancer Research UK", "row": "Male muscle", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 61 Annotation generated from male muscle RNA-seq data Male muscle RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Cancer Research UK", "row": "Male muscle", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 185 Alignments of male occipital cortex RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male occipital cortex RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male occipital cortex", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 277 Spliced-read support for male occipital cortex Male occipital cortex intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male occipital cortex", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 34 Annotation generated from male occipital cortex RNA-seq data Male occipital cortex RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male occipital cortex", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 186 Alignments of male omentum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male omentum RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male omentum", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 258 Spliced-read support for male omentum Male omentum intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male omentum", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 22 Annotation generated from male omentum RNA-seq data Male omentum RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male omentum", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 187 Alignments of male penis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male penis RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male penis", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 254 Spliced-read support for male penis Male penis intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male penis", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 54 Annotation generated from male penis RNA-seq data Male penis RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male penis", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 188 Alignments of male pituitary gland RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male pituitary gland RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male pituitary gland", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 279 Spliced-read support for male pituitary gland Male pituitary gland intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male pituitary gland", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 41 Annotation generated from male pituitary gland RNA-seq data Male pituitary gland RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male pituitary gland", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 189 Alignments of male pons RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male pons RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male pons", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 264 Spliced-read support for male pons Male pons intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male pons", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 35 Annotation generated from male pons RNA-seq data Male pons RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male pons", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 190 Alignments of male skeletal muscle tissue RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male skeletal muscle tissue RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male skeletal muscle tissue", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 257 Spliced-read support for male skeletal muscle tissue Male skeletal muscle tissue intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male skeletal muscle tissue", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 13 Annotation generated from male skeletal muscle tissue RNA-seq data Male skeletal muscle tissue RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male skeletal muscle tissue", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 191 Alignments of male skin of back 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male skin of back 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male skin of back 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 229 Spliced-read support for male skin of back 70dpf Male skin of back 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male skin of back 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 75 Annotation generated from male skin of back 70dpf RNA-seq data Male skin of back 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male skin of back 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 192 Alignments of male skin of back neonate RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male skin of back neonate RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male skin of back neonate", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 218 Spliced-read support for male skin of back neonate Male skin of back neonate intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male skin of back neonate", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 67 Annotation generated from male skin of back neonate RNA-seq data Male skin of back neonate RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male skin of back neonate", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 193 Alignments of male skin of body 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male skin of body 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male skin of body 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 224 Spliced-read support for male skin of body 30dpf Male skin of body 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male skin of body 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 78 Annotation generated from male skin of body 30dpf RNA-seq data Male skin of body 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male skin of body 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 194 Alignments of male small intestine 30dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male small intestine 30dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male small intestine 30dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 223 Spliced-read support for male small intestine 30dpf Male small intestine 30dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male small intestine 30dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 101 Annotation generated from male small intestine 30dpf RNA-seq data Male small intestine 30dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male small intestine 30dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 195 Alignments of male small intestine 70dpf RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male small intestine 70dpf RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male small intestine 70dpf", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 222 Spliced-read support for male small intestine 70dpf Male small intestine 70dpf intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "GENE-SWitCH", "row": "Male small intestine 70dpf", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 96 Annotation generated from male small intestine 70dpf RNA-seq data Male small intestine 70dpf RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "GENE-SWitCH", "row": "Male small intestine 70dpf", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 196 Alignments of male spleen RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male spleen RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male spleen", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 267 Spliced-read support for male spleen Male spleen intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male spleen", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 17 Annotation generated from male spleen RNA-seq data Male spleen RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male spleen", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 197 Alignments of male stomach RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male stomach RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male stomach", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 282 Spliced-read support for male stomach Male stomach intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male stomach", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 15 Annotation generated from male stomach RNA-seq data Male stomach RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male stomach", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 198 Alignments of male testis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male testis RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Cancer Research UK", "row": "Male testis", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 293 Spliced-read support for male testis Male testis intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Cancer Research UK", "row": "Male testis", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 102 Annotation generated from male testis RNA-seq data Male testis RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Cancer Research UK", "row": "Male testis", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}} 199 Alignments of male tonsil RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site Male tonsil RNA-seq alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male tonsil", "menu": "rnaseq", "group_order": 1, "column": "BAM files"}} 245 Spliced-read support for male tonsil Male tonsil intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "zmenu": "Supporting_alignment", "type": "rnaseq", "additional_renderers": ["histogram", "Variable height"], "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male tonsil", "menu": "rnaseq", "group_order": 2, "column": "Intron-spanning reads"}} 68 Annotation generated from male tonsil RNA-seq data Male tonsil RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "matrix": {"group": "Swine Genome Sequencing Consortium", "row": "Male tonsil", "menu": "rnaseq", "group_order": 3, "column": "Gene models"}}