42 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}} 25 BWA alignments of female brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 27 Spliced-read support for female brain female brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 26 Annotation generated from female brain RNA-seq data female brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 28 Spliced-read support for female brain female brain intron-spanning reads 1 \N 29 BWA alignments of female gill RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female gill RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female gill"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 31 Spliced-read support for female gill female gill intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female gill"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 30 Annotation generated from female gill RNA-seq data female gill RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female gill"}, "type": "rnaseq", "zmenu": "RNASeq"} 32 Spliced-read support for female gill female gill intron-spanning reads 1 \N 33 BWA alignments of female liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female liver RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female liver"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 35 Spliced-read support for female liver female liver intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female liver"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 34 Annotation generated from female liver RNA-seq data female liver RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female liver"}, "type": "rnaseq", "zmenu": "RNASeq"} 36 Spliced-read support for female liver female liver intron-spanning reads 1 \N 13 BWA alignments of female mixture of brain muscle skin ovary RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female mixture of brain muscle skin ovary RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female mixture of brain muscle skin ovary"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 15 Spliced-read support for female mixture of brain muscle skin ovary female mixture of brain muscle skin ovary intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female mixture of brain muscle skin ovary"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 14 Annotation generated from female mixture of brain muscle skin ovary RNA-seq data female mixture of brain muscle skin ovary RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female mixture of brain muscle skin ovary"}, "type": "rnaseq", "zmenu": "RNASeq"} 16 Spliced-read support for female mixture of brain muscle skin ovary female mixture of brain muscle skin ovary intron-spanning reads 1 \N 17 BWA alignments of female mixture of ovary RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female mixture of ovary RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female mixture of ovary"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 19 Spliced-read support for female mixture of ovary female mixture of ovary intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female mixture of ovary"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 18 Annotation generated from female mixture of ovary RNA-seq data female mixture of ovary RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female mixture of ovary"}, "type": "rnaseq", "zmenu": "RNASeq"} 20 Spliced-read support for female mixture of ovary female mixture of ovary intron-spanning reads 1 \N 9 BWA alignments of female mixture of skin RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female mixture of skin RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female mixture of skin"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 11 Spliced-read support for female mixture of skin female mixture of skin intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female mixture of skin"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 10 Annotation generated from female mixture of skin RNA-seq data female mixture of skin RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female mixture of skin"}, "type": "rnaseq", "zmenu": "RNASeq"} 12 Spliced-read support for female mixture of skin female mixture of skin intron-spanning reads 1 \N 21 BWA alignments of female muscle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female muscle RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female muscle"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 23 Spliced-read support for female muscle female muscle intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female muscle"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 22 Annotation generated from female muscle RNA-seq data female muscle RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female muscle"}, "type": "rnaseq", "zmenu": "RNASeq"} 24 Spliced-read support for female muscle female muscle intron-spanning reads 1 \N 37 BWA alignments of merged RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 40 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 39 Annotation generated FROM merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 41 Spliced-read support for merged merged intron-spanning reads 1 \N